CsGy7G002097 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G002097
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	AP complex subunit sigma
Location	Gy14Chr7: 1750240 .. 1755597 (+)
RNA-Seq Expression	CsGy7G002097
Synteny	CsGy7G002097

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAATTCCGAACAAAATATAATTTACGGCAGAACGACGGAGGGGAAGAAGCTTTACTGTGATCAGAGAGATCGAATTTTTGTTGAGGATTTTGGCTTTGAGATTGCTGGTTCTTGAAACTTCATAACAAAATGGTATGTGATTTCATTGCTTTGATTCATTTCTTGATTCTGATTGTTTCAAGGTTGTAATTGTGTTGTTCAGTGCGTTTGAGTCTTCCTCATCGTGGATCTGATTTGGTCTTTCTTTATGGGATGGATTAATTGGCTCCTTTCATGCTTCTGAATTGTTGTTTTGTTCTTGATTTGATTTTCTGTGGTTTTCGTTGTTGTATGATTCAGATCTTTGCTTAGCTGACATTCGAATTTTTGCTCAATTTCGTTTCTATTTGTTGTTTGATATGTCGTGCTGGTTCCTTTATGTGGCTGCATAACATCTTGGATTTCAGGAATGGTTCTTTAATCTTAGGGAAGATTTAGTCTTACTATAGGTGGTTTGGTTGTGTCTCTCTTGGGCGGAGCTATTTATTCTCTGTTGAGCTAATAATGTTAGGTGCAAACAAATACCTAAATTGGTCAGGGAAGGTAGTGCTCCTGTATATATAAGTTAGGATAATTAGTCAGGATAATTCTCTCCTTTGATATAAGCCTTTAGAGTGATTCAAAAAACAAAGTCGTTAGAGTTTATGCTCGAGATGGTCATAAGGGTGGAACAATATCATACCATCACAGAGATATGTGAGATTCTATTGTCCTTGACTAGACTGGAGAAGTGGCAATTCTTGTTTCATTTCGTTTGTTTCAGCCATGAATTGCTGAATTTCTTGCTCTCTTCTCAAGGACTTTTGTCAATTACCCATAAGTTTTTACTATTGTGGGCTGGATTCCTTTTTGTATGTCTTAGTTTTTTGGCATCTTTGGTTTGAGGTGTTTTTTGTATCCTCTTTAGCCTTTTCTCTTGCATTCTTTCATTTCTTTTTCAATGAAAGCTTGGTTTGTCATAAAACAGTTGTTCTCCTCTTTCCTGGTGCAATTTAAGTTGGTTTATATCTTCAAATTTTGTGTCCTTAAAGATGACCTATTCAATATCTTACATGGTTTTCTTAATAAAAACAACTGCTTTCATTGAGAAAAAAAACGAAAGAATACAAGGAGCTCTAACTGATGTTCTTGATGTAAATTCCAGATTCACTTTGTGCTTCTTATAAGTAGACAAGGAAAAGTGAGGTTGACAAAATGGTATTCTCCATATACTCAGAAGGAGAGATCTAAGGTAGGTCAGCTATTTTCCTCATTCTGTAATTTAATGCTAATAGCTTCATTCAATTTTCAAGCAATGAGAATATTTGCAAAAACATGTTTCCTTTCCATAAAGTTTATTTATTACCTTAATAAGACTTAATTCCCCTAGGATCTATTTGACTTACCACATTATGACATGTGTTTGTGGCTGCTTATGTTCTTTAAACAGGTTATCCGTGAGCTTAGTGGAATGATTCTAAATCGAGGGCCTAAGCTTTGTAACTTTGTGGAATGGAGGGGACTGAAAGCTGTCTATAAACGGTACTTCCTGGTTTATTGATGTGTTCTGCAACCCAAATTTTTAATTTTGTCCATGTTGTCAGTTCTAAATATGATAAATGATTCTACTGGACATGCGATGCAGATACGCTAGTCTTTACTTTTGCATGTGCATTGATCAGGAAGACAATGAATTAGAGGTCCTTGAAATTATTCATCATTACGTTGAGATTTTGGACCGTTACTTTGGCAGTGTAAGTGAATTCAGTTTTATTTCATAAGTTGTTTGAAATTATTCTTCTTGCACCCCCCTCTTTAATTGATTACCTAAACTGACACTTAATTTTTCTTTATTATGATCTTTCATTTATGTCTGTAGGTCTGTGAATTGGATTTGATCTTCAACTTTCACAAGGTAGTATTCACTTGTTTATATAAAATATGCACCTTCTCTTTAATATGCATTTCATTCTCTGAATTACTTGCACCTTAGCTTCTGACCATTGAATATTTCTTGGTTGGATGTTCGCACTCTTTATACGAAACTTTAAATGCAATTTTAACATTGCAGGCCTATTACATATTGGATGAGCTTCTAATCGCTGGCGAACTCCAAGAGTCAAGCAAGAAAACAGTAGCAAGATTGATAGCCGCACAGGTACTCTCTCCTTCTATCTTTGCAATACCTTAGTTAAGATTTCTTGTTTTTATGAGAAGCATTCAACAATAATCTCATTGATAGAATGGAATTACAAAAGAGCAAATGCACTGTGAGAGTTACATATTACTTTTTCCAATGTGCAACAAGGGGGGAAATAAGCCTGTAATCACAAAAGTAGAAAATTCACACCAAGACAGAGAAGTATACCTTCGTTAAGATTTTAATTTAGCTGACCATATGGTAATTGGTATATGATTGTAGGATTCGTTGGTGGAGACTGCAAAGGAGCAAGCTAGTTCAATTAGTAACATAATTGCACAGGCCACCAAGTAGATGAATAACGTGAGAGTGTATGTTTCAGTTTTTGCGAAATTGATTTGTTCCGAAGTATTGTAATTATATGTTATATCTCAACTAGTATCAAACAAGTTAATGCCTTATTTTTGCTTATTTCATTTGTTGTATTCCACAAATTGCTTTACGGAATTTCAAGTGATTCCATCTACCTGCCTAAATGTTTTCCTCCATTTTTCTGTTGTTCATCACATACAAATGTTATTGCTTGCTAGAAATGCTTGATCTCCTATACTTGTTTTCACAAAATCATAGTATCTTGAGTATGTTGTTTTGTGAGATTAGTTGATCTCCTATGCTTGCTTTCACAATGTATTGAGTATGTTGCCTTCTAGAGGAATTGAATCTCAATTTGAAAGTATTTTAATGTTTTTTTTTGCCCAATTTTGTGTAGGACACCATCTTTAGTGTTTCTTCCATAATGACAACCTCCATCTTTAACTTGTCTCCATCTTTAACTTGTCTCCATCTTTAACTTGTCTCCATCTTCAATGTATTGCTATTAAAAGCAACTTTATATATTGTGTTGGTCGAATTGACGGATAAAATAACTACCCAACCACCCTTAAAATTTCAAAATTTGGGTTAGTTTCAAATTTGGGTTGACTTAGGTTGAATGGTTAAGGTATTTATTTACTTTATTTTATCTTTTAAAGTATATTATTTATTAACTAAAATACTTATTTTAGTAACTAAAATTTCATAAAATTCAAATGTCAAATATCAAAATTGAACGTATCTATTACAAATTTTAAAAAAACATTCATAATATGTATGAATTATAATATTTATAAGTTGTAATATATATTTTAATAATATTAAAATTTTGGGTTAGGTTGGATCCGACTAGAATTTTAAAAAATGTAATTTCAATTCAATCCGAAAAAACATATATAGATAAAAAAAAATTCAAACTAATCTTTACCATTTAGGTTGAATTTAACACTAATTTAGTGAAAATTAATTAAAAACCATTCAATGTCATTAAATCCAGAATTTAAATTTTACATATTAAGAAACATATGTTTGGATCTTTACATATTAAAAAACATAATTATGTGATCCAAACAGTACAAACTCAAATTTTAAAAATATTTTTTTTTATGTTTTCATAATAATATTTCTATGTTTTCATTGTATCCAGATTTTTTTAATTTTATATTTTAAAAACCAGAATTATGAACTCGATTCATTTTTTTAAAATATAATATGTATTTCGTAATGGACATTTTCAAATACAACACAAAAATTAAAACTACTTACAAACTACAACAAACTCATTTATAGCACAAAAGTTGAAAATATTTGTAAATATAGTAAAATGGTTGATTTTGATTCGCTAATAAAAACTTAGTGTGTATGAGTGATAGACTCATTAAACTTTACATATTTTGTTATATTTATAATTTTATAAATATTACTATATTTACAATTATACAATGGTTATCATAAATGCACCTCTTGGTATTTCTTTGAGACTTCTTAATCATTGGTAAAAATGGATTTATTGTTGAATGTTGTATTCAAAAGCATTTACACATCTATTGATAGGTTGAATGTTTCTAATGCCATTCTTCTATCACAGCATATATAAACAAAGCTAAATGTCTCTCTACTCTAAGAGGTCAATTAACCTCTCTCTCTCTTTCTTTTACCACGTGATATTCTGACTCAATTTTTTCTGGTGACAGAGATCCTTCAGAAAATATTAGCAGAACCCATTGAATGGCTGAGCATTCCATCTTCCCAGTTCAAATCATTGGCTTTTGGGTCTCTCTCAATTATTTGAAGGGCTACTTCTGGCGATGGTGGTGTCTGCATTCAAACAGAAACAAATGTTGTTTATGTTGTACATTTGGTTTTTCATAGGATTTGTTCTGTGCTAAAATTTGAGAGTTGATGTGGATGTTTCAAAGGAGTAGTATTACCATGGTTCGAATTTTAGGCCAATTTACTTGACGGAAAAATGGATGTCGTTTGATTTCATCGGAACCAGTCCTTGATCCTAGACGACGTGCCGGGTCTCTTTGTAGTAGTGCATCAATCAGTTGTTTTGCTGCAAGACTTACCTGCAATATTAAGCATGAGCAGCAGCTGCATTCAAACAACTCAAAACAAGATCTAAGCCTTAACACACAAATGGAAGAACTAAAAATGAGATAGGAGTGATGGGTTTCTTCTTTTATTTTTGTTTTTTAGTAAAAGGAAAGCTACTTACCTGAATACTAATGGGGAAGGTCAAGTCCTTGAACAAAATATTGGCAAAAGTCTTATTCCTGTTTTTGCCTTTAAAGGGTGTGCGACCATAGAGCATTTCATACAATAAGATACCTGAAATTCATGCATCAAATGATCAAAGAAGGAAAATAAAAAGTCTCATGGATGTTGGTGCTGCATCCTATTGTTTTGAAAATCAAACAATATTAAATGAAAGTCATTCTTTACTATAGTTTTGAGTGATTCATGCTTATTTTGTATTCTACGTCAGTCCCCCAACTTTCACCTAGCCTTTTAACAAAAACGAATTTGAATATTGACTCATAATTTACTATAAAATGAGGAGAGAGTGAAGTTGTGACGTTGTGAGGTCCACAATGTAAGAAGTTATTAAAATATAAAATTGATGTGGTTTTAGTCATAGGGCATTGATGTGTTTTGAGTCATAGGGACCATGAACTTATTGGACCAAACAAGTGGTGTCTTCCCCTGATTCAACTCCTTGAGCCCGACAATTCCTAAAGTGTGAGTTCAGTATTCATCTGATAAACTTCCACTACTTGTGCCAAAGAACAAACGATGTATATGTATTCTTACCAAGAGTCCA

mRNA sequence

GGAATTCCGAACAAAATATAATTTACGGCAGAACGACGGAGGGGAAGAAGCTTTACTGTGATCAGAGAGATCGAATTTTTGTTGAGGATTTTGGCTTTGAGATTGCTGGTTCTTGAAACTTCATAACAAAATGATTCACTTTGTGCTTCTTATAAGTAGACAAGGAAAAGTGAGGTTGACAAAATGGTATTCTCCATATACTCAGAAGGAGAGATCTAAGGTTATCCGTGAGCTTAGTGGAATGATTCTAAATCGAGGGCCTAAGCTTTGTAACTTTGTGGAATGGAGGGGACTGAAAGCTGTCTATAAACGATACGCTAGTCTTTACTTTTGCATGTGCATTGATCAGGAAGACAATGAATTAGAGGTCCTTGAAATTATTCATCATTACGTTGAGATTTTGGACCGTTACTTTGGCAGTGTCTGTGAATTGGATTTGATCTTCAACTTTCACAAGGCCTATTACATATTGGATGAGCTTCTAATCGCTGGCGAACTCCAAGAGTCAAGCAAGAAAACAGTAGCAAGATTGATAGCCGCACAGGATTCGTTGGTGGAGACTGCAAAGGAGCAAGCTAGTTCAATTAGTAACATAATTGCACAGGCCACCAAGTAGATGAATAACGTGAGAGTAGATCCTTCAGAAAATATTAGCAGAACCCATTGAATGGCTGAGCATTCCATCTTCCCAGTTCAAATCATTGGCTTTTGGGTCTCTCTCAATTATTTGAAGGGCTACTTCTGGCGATGGTGGTGTCTGCATTCAAACAGAAACAAATGTTGTTTATGTTGTACATTTGGTTTTTCATAGGATTTGTTCTGTGCTAAAATTTGAGAGTTGATGTGGATGTTTCAAAGGAGTAGTATTACCATGGTTCGAATTTTAGGCCAATTTACTTGACGGAAAAATGGATGTCGTTTGATTTCATCGGAACCAGTCCTTGATCCTAGACGACGTGCCGGGTCTCTTTGTAGTAGTGCATCAATCAGTTGTTTTGCTGCAAGACTTACCTGCAATATTAAGCATGAGCAGCAGCTGCATTCAAACAACTCAAAACAAGATCTAAGCCTTAACACACAAATGGAAGAACTAAAAATGAGATAGGAGTGATGGGTTTCTTCTTTTATTTTTGTTTTTTAGTAAAAGGAAAGCTACTTACCTGAATACTAATGGGGAAGGTCAAGTCCTTGAACAAAATATTGGCAAAAGTCTTATTCCTGTTTTTGCCTTTAAAGGGTGTGCGACCATAGAGCATTTCATACAATAAGATACCTGAAATTCATGCATCAAATGATCAAAGAAGGAAAATAAAAAGTCTCATGGATGTTGGTGCTGCATCCTATTGTTTTGAAAATCAAACAATATTAAATGAAAGTCATTCTTTACTATAGTTTTGAGTGATTCATGCTTATTTTGTATTCTACGTCAGTCCCCCAACTTTCACCTAGCCTTTTAACAAAAACGAATTTGAATATTGACTCATAATTTACTATAAAATGAGGAGAGAGTGAAGTTGTGACGTTGTGAGGTCCACAATGTAAGAAGTTATTAAAATATAAAATTGATGTGGTTTTAGTCATAGGGCATTGATGTGTTTTGAGTCATAGGGACCATGAACTTATTGGACCAAACAAGTGGTGTCTTCCCCTGATTCAACTCCTTGAGCCCGACAATTCCTAAAGTGTGAGTTCAGTATTCATCTGATAAACTTCCACTACTTGTGCCAAAGAACAAACGATGTATATGTATTCTTACCAAGAGTCCA

Coding sequence (CDS)

ATGATTCACTTTGTGCTTCTTATAAGTAGACAAGGAAAAGTGAGGTTGACAAAATGGTATTCTCCATATACTCAGAAGGAGAGATCTAAGGTTATCCGTGAGCTTAGTGGAATGATTCTAAATCGAGGGCCTAAGCTTTGTAACTTTGTGGAATGGAGGGGACTGAAAGCTGTCTATAAACGATACGCTAGTCTTTACTTTTGCATGTGCATTGATCAGGAAGACAATGAATTAGAGGTCCTTGAAATTATTCATCATTACGTTGAGATTTTGGACCGTTACTTTGGCAGTGTCTGTGAATTGGATTTGATCTTCAACTTTCACAAGGCCTATTACATATTGGATGAGCTTCTAATCGCTGGCGAACTCCAAGAGTCAAGCAAGAAAACAGTAGCAAGATTGATAGCCGCACAGGATTCGTTGGTGGAGACTGCAAAGGAGCAAGCTAGTTCAATTAGTAACATAATTGCACAGGCCACCAAGTAG

Protein sequence

MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKRYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK*

Homology

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BLAST of CsGy7G002097 vs. ExPASy Swiss-Prot
Match: Q8LEZ8 (AP-1 complex subunit sigma-1 OS=Arabidopsis thaliana OX=3702 GN=AAP19-1 PE=1 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 4.1e-81
Identity = 149/161 (92.55%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60
           MIHFVLL+SRQGKVRLTKWYSPYTQKERSKVIRELSG+ILNRGPKLCNF+EWRG K VYK
Sbjct: 1   MIHFVLLVSRQGKVRLTKWYSPYTQKERSKVIRELSGVILNRGPKLCNFIEWRGYKVVYK 60

Query: 61  RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
           RYASLYFCMCID+ DNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA
Sbjct: 61  RYASLYFCMCIDEADNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120

Query: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 162
           GELQESSKKTVAR+I+AQD LVE AKE+ASSISNIIAQATK
Sbjct: 121 GELQESSKKTVARIISAQDQLVEVAKEEASSISNIIAQATK 161

[Close]

BLAST of CsGy7G002097 vs. ExPASy Swiss-Prot
Match: O23685 (AP-1 complex subunit sigma-2 OS=Arabidopsis thaliana OX=3702 GN=AAP19-2 PE=2 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 4.1e-81
Identity = 150/160 (93.75%), Postives = 155/160 (96.88%), Query Frame = 0


Query: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60
           MIHFVLL+SRQGKVRLTKWYSPY QKERSKVIRELSG+ILNRGPKLCNFVEWRG K VYK
Sbjct: 1   MIHFVLLVSRQGKVRLTKWYSPYAQKERSKVIRELSGVILNRGPKLCNFVEWRGYKVVYK 60

Query: 61  RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
           RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA
Sbjct: 61  RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120

Query: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQAT 161
           GELQESSKKTVAR+I+AQD LVE AKE+ASSISNIIAQAT
Sbjct: 121 GELQESSKKTVARIISAQDQLVEVAKEEASSISNIIAQAT 160

[Close]

BLAST of CsGy7G002097 vs. ExPASy Swiss-Prot
Match: B0G185 (AP-1 complex subunit sigma-2 OS=Dictyostelium discoideum OX=44689 GN=ap1s2 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 9.8e-59
Identity = 105/141 (74.47%), Postives = 126/141 (89.36%), Query Frame = 0


Query: 3   HFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKRY 62
           HF+LL+SRQGK RLTKWYSP+T KE+S+  RE+  M+LNR PKLCNF+EW+  K ++KRY
Sbjct: 4   HFLLLLSRQGKTRLTKWYSPFTNKEKSRFTREIGNMVLNRPPKLCNFLEWKEYKIIFKRY 63

Query: 63  ASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGE 122
           ASLYF +C D+EDNEL VLEIIHH+VEILDRYFG+VCELDLIFNFHKAYYILDEL++AGE
Sbjct: 64  ASLYFVVCCDREDNELIVLEIIHHFVEILDRYFGNVCELDLIFNFHKAYYILDELIMAGE 123

Query: 123 LQESSKKTVARLIAAQDSLVE 144
           LQE+SKKTV RLI+ QD+L+E
Sbjct: 124 LQETSKKTVLRLISQQDTLLE 144

[Close]

BLAST of CsGy7G002097 vs. ExPASy Swiss-Prot
Match: Q3ZBS3 (AP-1 complex subunit sigma-2 OS=Bos taurus OX=9913 GN=AP1S2 PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 7.1e-49
Identity = 93/146 (63.70%), Postives = 113/146 (77.40%), Query Frame = 0


Query: 2   IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKR 61
           + F+LL SRQGK+RL KWY P + KE+ K+ REL   +L R PK+C+F+EWR LK VYKR
Sbjct: 1   MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR 60

Query: 62  YASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG 121
           YASLYFC  I+ +DNEL  LEIIH YVE+LD+YFGSVCELD+IFNF KAY+ILDE L+ G
Sbjct: 61  YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG 120

Query: 122 ELQESSKKTVARLIAAQDSLVETAKE 148
           E+QE+SKK V + I   D L E AKE
Sbjct: 121 EVQETSKKNVLKAIEQADLLQEDAKE 146

[Close]

BLAST of CsGy7G002097 vs. ExPASy Swiss-Prot
Match: Q9DB50 (AP-1 complex subunit sigma-2 OS=Mus musculus OX=10090 GN=Ap1s2 PE=1 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 7.1e-49
Identity = 93/146 (63.70%), Postives = 113/146 (77.40%), Query Frame = 0


Query: 2   IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKR 61
           + F+LL SRQGK+RL KWY P + KE+ K+ REL   +L R PK+C+F+EWR LK VYKR
Sbjct: 1   MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR 60

Query: 62  YASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG 121
           YASLYFC  I+ +DNEL  LEIIH YVE+LD+YFGSVCELD+IFNF KAY+ILDE L+ G
Sbjct: 61  YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG 120

Query: 122 ELQESSKKTVARLIAAQDSLVETAKE 148
           E+QE+SKK V + I   D L E AKE
Sbjct: 121 EVQETSKKNVLKAIEQADLLQEDAKE 146

[Close]

BLAST of CsGy7G002097 vs. NCBI nr
Match: XP_004144562.1 (AP-1 complex subunit sigma-1 [Cucumis sativus])

HSP 1 Score: 319 bits (817), Expect = 1.04e-109
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60
           MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK
Sbjct: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60

Query: 61  RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
           RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA
Sbjct: 61  RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120

Query: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161
           GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK
Sbjct: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161

[Close]

BLAST of CsGy7G002097 vs. NCBI nr
Match: XP_022135730.1 (AP-1 complex subunit sigma-2 [Momordica charantia] >XP_022135731.1 AP-1 complex subunit sigma-2 [Momordica charantia])

HSP 1 Score: 317 bits (812), Expect = 6.01e-109
Identity = 159/161 (98.76%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60
           MIHFVLLISRQGKVRLTKWYSPY+QKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK
Sbjct: 1   MIHFVLLISRQGKVRLTKWYSPYSQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60

Query: 61  RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
           RYASLYFCMCIDQEDNELE+LEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA
Sbjct: 61  RYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120

Query: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161
           GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK
Sbjct: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161

[Close]

BLAST of CsGy7G002097 vs. NCBI nr
Match: XP_008462009.1 (PREDICTED: AP-1 complex subunit sigma-2 [Cucumis melo])

HSP 1 Score: 316 bits (810), Expect = 1.21e-108
Identity = 159/161 (98.76%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60
           MIHFVLLISRQGKVRLTKWYSPY+QKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK
Sbjct: 1   MIHFVLLISRQGKVRLTKWYSPYSQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60

Query: 61  RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
           RYASLYFCMCIDQ+DNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA
Sbjct: 61  RYASLYFCMCIDQDDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120

Query: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161
           GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK
Sbjct: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161

[Close]

BLAST of CsGy7G002097 vs. NCBI nr
Match: XP_038888262.1 (AP-1 complex subunit sigma-2 [Benincasa hispida])

HSP 1 Score: 316 bits (809), Expect = 1.72e-108
Identity = 158/161 (98.14%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60
           MIHFVLLISRQGKVRLTKWYSPY+QKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK
Sbjct: 1   MIHFVLLISRQGKVRLTKWYSPYSQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60

Query: 61  RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
           RYASLYFCMCIDQ+DNELE+LEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA
Sbjct: 61  RYASLYFCMCIDQDDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120

Query: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161
           GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK
Sbjct: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161

[Close]

BLAST of CsGy7G002097 vs. NCBI nr
Match: XP_022952715.1 (AP-1 complex subunit sigma-1 [Cucurbita moschata] >XP_022969279.1 AP-1 complex subunit sigma-1-like [Cucurbita maxima] >XP_023554628.1 AP-1 complex subunit sigma-1-like [Cucurbita pepo subsp. pepo] >KAG7011840.1 AP-1 complex subunit sigma-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 314 bits (805), Expect = 7.02e-108
Identity = 158/161 (98.14%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60
           MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK
Sbjct: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60

Query: 61  RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
           RYASLYFCMCIDQ+DNELEVLE IHH+VEILDRYFGSVCELDLIFNFHKAYYILDELLIA
Sbjct: 61  RYASLYFCMCIDQDDNELEVLECIHHFVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120

Query: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161
           GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK
Sbjct: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161

[Close]

BLAST of CsGy7G002097 vs. ExPASy TrEMBL
Match: A0A0A0K1P7 (AP complex subunit sigma OS=Cucumis sativus OX=3659 GN=Csa_7G029970 PE=3 SV=1)

HSP 1 Score: 319 bits (817), Expect = 5.03e-110
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60
           MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK
Sbjct: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60

Query: 61  RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
           RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA
Sbjct: 61  RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120

Query: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161
           GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK
Sbjct: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161

[Close]

BLAST of CsGy7G002097 vs. ExPASy TrEMBL
Match: A0A6J1C1K2 (AP complex subunit sigma OS=Momordica charantia OX=3673 GN=LOC111007622 PE=3 SV=1)

HSP 1 Score: 317 bits (812), Expect = 2.91e-109
Identity = 159/161 (98.76%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60
           MIHFVLLISRQGKVRLTKWYSPY+QKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK
Sbjct: 1   MIHFVLLISRQGKVRLTKWYSPYSQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60

Query: 61  RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
           RYASLYFCMCIDQEDNELE+LEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA
Sbjct: 61  RYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120

Query: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161
           GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK
Sbjct: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161

[Close]

BLAST of CsGy7G002097 vs. ExPASy TrEMBL
Match: A0A1S3CGG1 (AP complex subunit sigma OS=Cucumis melo OX=3656 GN=LOC103500483 PE=3 SV=1)

HSP 1 Score: 316 bits (810), Expect = 5.87e-109
Identity = 159/161 (98.76%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60
           MIHFVLLISRQGKVRLTKWYSPY+QKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK
Sbjct: 1   MIHFVLLISRQGKVRLTKWYSPYSQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60

Query: 61  RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
           RYASLYFCMCIDQ+DNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA
Sbjct: 61  RYASLYFCMCIDQDDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120

Query: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161
           GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK
Sbjct: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161

[Close]

BLAST of CsGy7G002097 vs. ExPASy TrEMBL
Match: A0A6J1I247 (AP complex subunit sigma OS=Cucurbita maxima OX=3661 GN=LOC111468332 PE=3 SV=1)

HSP 1 Score: 314 bits (805), Expect = 3.40e-108
Identity = 158/161 (98.14%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60
           MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK
Sbjct: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60

Query: 61  RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
           RYASLYFCMCIDQ+DNELEVLE IHH+VEILDRYFGSVCELDLIFNFHKAYYILDELLIA
Sbjct: 61  RYASLYFCMCIDQDDNELEVLECIHHFVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120

Query: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161
           GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK
Sbjct: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161

[Close]

BLAST of CsGy7G002097 vs. ExPASy TrEMBL
Match: A0A6J1GMJ5 (AP complex subunit sigma OS=Cucurbita moschata OX=3662 GN=LOC111455328 PE=3 SV=1)

HSP 1 Score: 314 bits (805), Expect = 3.40e-108
Identity = 158/161 (98.14%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60
           MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK
Sbjct: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60

Query: 61  RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
           RYASLYFCMCIDQ+DNELEVLE IHH+VEILDRYFGSVCELDLIFNFHKAYYILDELLIA
Sbjct: 61  RYASLYFCMCIDQDDNELEVLECIHHFVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120

Query: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161
           GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK
Sbjct: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161

[Close]

BLAST of CsGy7G002097 vs. TAIR 10
Match: AT2G17380.1 (associated protein 19 )

HSP 1 Score: 302.0 bits (772), Expect = 2.9e-82
Identity = 149/161 (92.55%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60
           MIHFVLL+SRQGKVRLTKWYSPYTQKERSKVIRELSG+ILNRGPKLCNF+EWRG K VYK
Sbjct: 1   MIHFVLLVSRQGKVRLTKWYSPYTQKERSKVIRELSGVILNRGPKLCNFIEWRGYKVVYK 60

Query: 61  RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
           RYASLYFCMCID+ DNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA
Sbjct: 61  RYASLYFCMCIDEADNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120

Query: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 162
           GELQESSKKTVAR+I+AQD LVE AKE+ASSISNIIAQATK
Sbjct: 121 GELQESSKKTVARIISAQDQLVEVAKEEASSISNIIAQATK 161

[Close]

BLAST of CsGy7G002097 vs. TAIR 10
Match: AT4G35410.2 (Clathrin adaptor complex small chain family protein )

HSP 1 Score: 302.0 bits (772), Expect = 2.9e-82
Identity = 150/160 (93.75%), Postives = 155/160 (96.88%), Query Frame = 0


Query: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60
           MIHFVLL+SRQGKVRLTKWYSPY QKERSKVIRELSG+ILNRGPKLCNFVEWRG K VYK
Sbjct: 1   MIHFVLLVSRQGKVRLTKWYSPYAQKERSKVIRELSGVILNRGPKLCNFVEWRGYKVVYK 60

Query: 61  RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
           RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA
Sbjct: 61  RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120

Query: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQAT 161
           GELQESSKKTVAR+I+AQD LVE AKE+ASSISNIIAQAT
Sbjct: 121 GELQESSKKTVARIISAQDQLVEVAKEEASSISNIIAQAT 160

[Close]

BLAST of CsGy7G002097 vs. TAIR 10
Match: AT4G35410.1 (Clathrin adaptor complex small chain family protein )

HSP 1 Score: 221.9 bits (564), Expect = 3.8e-58
Identity = 104/109 (95.41%), Postives = 106/109 (97.25%), Query Frame = 0


Query: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60
           MIHFVLL+SRQGKVRLTKWYSPY QKERSKVIRELSG+ILNRGPKLCNFVEWRG K VYK
Sbjct: 1   MIHFVLLVSRQGKVRLTKWYSPYAQKERSKVIRELSGVILNRGPKLCNFVEWRGYKVVYK 60

Query: 61  RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHK 110
           RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHK
Sbjct: 61  RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHK 109

[Close]

BLAST of CsGy7G002097 vs. TAIR 10
Match: AT1G47830.1 (SNARE-like superfamily protein )

HSP 1 Score: 156.4 bits (394), Expect = 2.0e-38
Identity = 74/141 (52.48%), Postives = 101/141 (71.63%), Query Frame = 0


Query: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYK 60
           MI F+LL +RQGK RL K+Y P  + E+ KV  E+  +++NR  K  NFVE+R  K +Y+
Sbjct: 1   MIRFILLQNRQGKTRLAKYYVPLEESEKHKVEYEVHRLVVNRDAKFTNFVEFRTHKVIYR 60

Query: 61  RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
           RYA L+F +C+D  DNEL  LE IH +VEILD +F +VCELDL+FNFHK Y ILDE ++A
Sbjct: 61  RYAGLFFSVCVDITDNELAYLESIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILA 120

Query: 121 GELQESSKKTVARLIAAQDSL 142
           GELQE+SK+ +   ++  + L
Sbjct: 121 GELQETSKRAIIERMSELEKL 141

[Close]

BLAST of CsGy7G002097 vs. TAIR 10
Match: AT2G19790.1 (SNARE-like superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 7.1e-28
Identity = 57/138 (41.30%), Postives = 94/138 (68.12%), Query Frame = 0


Query: 2   IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKR 61
           I F+L++++QG+ RL ++Y   T +ER  +  E+    L R  + C+FVE R  K VY+R
Sbjct: 3   IRFILMVNKQGQTRLAQYYEWLTLEERRALEGEIVRKCLARNDQQCSFVEHRNYKIVYRR 62

Query: 62  YASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG 121
           YASL+F + +D ++NEL +LE IH  VE +D++FG+VCELD++F+  KA+++L+E+++ G
Sbjct: 63  YASLFFMVGVDDDENELAILEFIHLLVETMDKHFGNVCELDIMFHLEKAHFMLEEMVMNG 122

Query: 122 ELQESSKKTVARLIAAQD 140
            + E+SK  +   I   D
Sbjct: 123 CIVETSKANILSPIQLMD 140

The following BLAST results are available for this feature:

BLAST of CsGy7G002097 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LEZ8	4.1e-81	92.55	AP-1 complex subunit sigma-1 OS=Arabidopsis thaliana OX=3702 GN=AAP19-1 PE=1 SV=...	[more]
O23685	4.1e-81	93.75	AP-1 complex subunit sigma-2 OS=Arabidopsis thaliana OX=3702 GN=AAP19-2 PE=2 SV=...	[more]
B0G185	9.8e-59	74.47	AP-1 complex subunit sigma-2 OS=Dictyostelium discoideum OX=44689 GN=ap1s2 PE=3 ...	[more]
Q3ZBS3	7.1e-49	63.70	AP-1 complex subunit sigma-2 OS=Bos taurus OX=9913 GN=AP1S2 PE=2 SV=1	[more]
Q9DB50	7.1e-49	63.70	AP-1 complex subunit sigma-2 OS=Mus musculus OX=10090 GN=Ap1s2 PE=1 SV=1	[more]

BLAST of CsGy7G002097 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144562.1	1.04e-109	100.00	AP-1 complex subunit sigma-1 [Cucumis sativus]	[more]
XP_022135730.1	6.01e-109	98.76	AP-1 complex subunit sigma-2 [Momordica charantia] >XP_022135731.1 AP-1 complex ...	[more]
XP_008462009.1	1.21e-108	98.76	PREDICTED: AP-1 complex subunit sigma-2 [Cucumis melo]	[more]
XP_038888262.1	1.72e-108	98.14	AP-1 complex subunit sigma-2 [Benincasa hispida]	[more]
XP_022952715.1	7.02e-108	98.14	AP-1 complex subunit sigma-1 [Cucurbita moschata] >XP_022969279.1 AP-1 complex s...	[more]

BLAST of CsGy7G002097 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1P7	5.03e-110	100.00	AP complex subunit sigma OS=Cucumis sativus OX=3659 GN=Csa_7G029970 PE=3 SV=1	[more]
A0A6J1C1K2	2.91e-109	98.76	AP complex subunit sigma OS=Momordica charantia OX=3673 GN=LOC111007622 PE=3 SV=...	[more]
A0A1S3CGG1	5.87e-109	98.76	AP complex subunit sigma OS=Cucumis melo OX=3656 GN=LOC103500483 PE=3 SV=1	[more]
A0A6J1I247	3.40e-108	98.14	AP complex subunit sigma OS=Cucurbita maxima OX=3661 GN=LOC111468332 PE=3 SV=1	[more]
A0A6J1GMJ5	3.40e-108	98.14	AP complex subunit sigma OS=Cucurbita moschata OX=3662 GN=LOC111455328 PE=3 SV=1	[more]

BLAST of CsGy7G002097 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17380.1	2.9e-82	92.55	associated protein 19	[more]
AT4G35410.2	2.9e-82	93.75	Clathrin adaptor complex small chain family protein	[more]
AT4G35410.1	3.8e-58	95.41	Clathrin adaptor complex small chain family protein	[more]
AT1G47830.1	2.0e-38	52.48	SNARE-like superfamily protein	[more]
AT2G19790.1	7.1e-28	41.30	SNARE-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.450.60		coord: 1..157 e-value: 4.2E-66 score: 223.6
None	No IPR available	PANTHER	PTHR11753:SF49	AP-1 COMPLEX SUBUNIT SIGMA-2	coord: 1..152
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 1..140 e-value: 6.3E-54 score: 181.8
IPR016635	Adaptor protein complex, sigma subunit	PIRSF	PIRSF015588	AP_complex_sigma	coord: 1..152 e-value: 1.4E-67 score: 224.2
IPR016635	Adaptor protein complex, sigma subunit	PANTHER	PTHR11753	ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY	coord: 1..152
IPR044733	AP-1 complex subunit sigma	CDD	cd14831	AP1_sigma	coord: 3..143 e-value: 5.72251E-102 score: 286.762
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 1..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G002097.1	CsGy7G002097.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0015031	protein transport
cellular_component	GO:0030121	AP-1 adaptor complex
molecular_function	GO:0035615	clathrin adaptor activity