CsGy7G001920 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G001920
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr7: 1632229 .. 1634626 (+)
RNA-Seq Expression	CsGy7G001920
Synteny	CsGy7G001920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAATATGAAGATGCAGCAGCCTGTTTATCATGAAGAGGGATCAAAGGAGCTACGAAAAAATTGTGAAAGTTTTGAGGCTAAGATTTTTGCTAAGGTTACCAGTATGGTATGTCTTGCTCACTTTCTTTATAGTTTAAATCAAGAATTGTACGAATAAACATATTCTCATTTATGTTTAGCCCATATGCTTATAAAAATAAGATTCTAATATCATTTGGTGATGTATTTTTTCTCTCTCCTTTTTTGTCGGGTTGTTCTTTCATTTCTTTTTCTTTCCTGATTTCAGTCAGATTACCTAAGGAAAATATCTCTGAAGTTTTTCCCATCCTCACTATTATAAGCCTCTGGATTTTGGTAAGTCATCAACAGACAGTTGTTGCACGATGTAGTACATGATCGAAATTGCACTAACGTAACATTTTTTAAGCTTATTGGTGAATGACTACTGACTAGAGCTTTTGATTTCACTATTTTGAATATTGTAATAACAATTGAAGGTGGAAAACCAGGAACTGTGACTGGGGATTCTTTGTCTCGATTTGACCGACAAAAATATCGCGATTTCATGTATGATTTCTCACCTTCTTCTTGCATCATTGTAATGGTCATTGTAATGGCTCACATTTTCAGATATAGTTAAGTTTCGTCAAATGAAGCTTAGTCTTGAATTTTATCGTGGTTACTTAATTTGGATTAAGTTTGAGTTGATGGAATTGGGGATTTGAATGGGTGAAAATTCGATTTTTTGTCTCGTTTGCCCTTTCTCCTTCACGAGCCTCCCTCATTTTTTCTAGTATTAAATTTACTTCTTCACCACCGATTTAAAACTCATAGATGAGGGGAGTGTTAGATATTATATTGAGCCTCCCTCATTTTTTCTAGTATTAAATTTACTTCTTCACCACCGATTTAAAACTCATAGATGAGGGGAGTGTTAGATATTATATTAAATTTATCTTTAGACCTTTTAAATTTTGGTCAATTGATGATTTAGGATGTTCTAGATTCAAATCCATCCAATTTTATAGACTCCAACAATAATGTACACGGGAAAGGGGAAATCATTGACTACACGGGGAAGGGGATTATATTCTCTATCCTCACCCATCTTATTTAGTTTTTTTGAATAAAAAAGATATCTTTTTTAAAAGTAATGTAAAATTTAAAACATATTTAAAAAATAGGTTGTTGCAAAACTATTATTTAGGTGAAGTGTGTACCCGACTTCCATGAATTGAACTTTACCTCAAATCACCTATTTTTTATATGCACTCACCAATACTAAGTAAAATTTTACTTTCCATAATTTTATTTTATTTGAATAAAAGAAATGTATTGGAAAATGACTTATTTAGTTTGTAAAATGTTGAAAGTATTAAGAATTTGTTAAAAATTAAATTACTTAAATAAAAAACAAATGGGGATTTTTTTCTTGGGAAATTTGATCCCCTTGAATTCCTTGTGGGGGAATCTTCGCCCTACCTCCGTAGAAATTTTTTGCCACGGATGGTATTGGTAGAACTCGTCTCTCTTTTTCATTCTCTTTCTCTAAATTTTGATTGTCCCTCTCATTCTTCCTCGCTCTCTTCCTCATAATTGTGTGTGATTGTCCACCCCAACTCTATTGTTGTCTTTGTGCTGAGCAGATAACAAATTATGATTGGTGTTTTTCTTTTAGGCTTTACATGAAGCCTCTATACATTCGATATGGTGGTTCATGGAACGACAACAAACAATGCTATACTGGAGGTCAATTGAAAGGTATCTTAGTGCCGATCACAATAAACTATAATGAATTGAGAGATCGCATGTATATGAACTTACAAAAGTTAGTTCCTCAGAGTTCAACATTATAATATGGGTGAAATATAAGTTGGACCTTGATTCTCCTCCGATGTATATAATGGATGACTGATGTTCAATTTCTGGTCCGGGAAGTTAAATTTAAAAAACCTTTGATATTCTTAAGTCTTGAAAAAATCCAACAACAAACAACGACCTCTGAAGACAACAATGAGAGACGGCAACAAGCATGTAAAGTGGAGGGTGTTCTTCCTACTAGTGATGGAAATGAAAATGAAACTGGTATTTTTTCATGGGTGGCCTCGATGAGAAACGCCAACGCCAACGCCAACGCCAACTCACAGTCAAAAAGGAGGTTGTAGTGATTAGTGTTCGGAACGAGAGCAATGTAGGTAGGTTGCATAAGCGAGTGATTATTCTTCATCAAACTCTCTTGGACAGTTGCATAAAAAGTTTGATAATTTTATGTGGAACAATAATGGTGCAAAGCATATGATTGTTTGGTTGATATGAAAGATTTGAGAGCTGCAGAAGATGTTGATAATGTTATTAGGGATGTGAGGATCAAGAGGAGAGGAAAGGAAGGATAG

mRNA sequence

ATGGAGAATATGAAGATGCAGCAGCCTGTTTATCATGAAGAGGGATCAAAGGAGCTACGAAAAAATTGTGAAAGTTTTGAGGCTAAGATTTTTGCTAAGGTTACCAGTGGAAAACCAGGAACTGTGACTGGGGATTCTTTGTCTCGATTTGACCGACAAAAATATCGCGATTTCATGCTTTACATGAAGCCTCTATACATTCGATATGGTGGTTCATGGAACGACAACAAACAATGCTATACTGGAGGTCAATTGAAAGATTTGAGAGCTGCAGAAGATGTTGATAATGTTATTAGGGATGTGAGGATCAAGAGGAGAGGAAAGGAAGGATAG

Coding sequence (CDS)

ATGGAGAATATGAAGATGCAGCAGCCTGTTTATCATGAAGAGGGATCAAAGGAGCTACGAAAAAATTGTGAAAGTTTTGAGGCTAAGATTTTTGCTAAGGTTACCAGTGGAAAACCAGGAACTGTGACTGGGGATTCTTTGTCTCGATTTGACCGACAAAAATATCGCGATTTCATGCTTTACATGAAGCCTCTATACATTCGATATGGTGGTTCATGGAACGACAACAAACAATGCTATACTGGAGGTCAATTGAAAGATTTGAGAGCTGCAGAAGATGTTGATAATGTTATTAGGGATGTGAGGATCAAGAGGAGAGGAAAGGAAGGATAG

Protein sequence

MENMKMQQPVYHEEGSKELRKNCESFEAKIFAKVTSGKPGTVTGDSLSRFDRQKYRDFMLYMKPLYIRYGGSWNDNKQCYTGGQLKDLRAAEDVDNVIRDVRIKRRGKEG*

Homology

[Close]

BLAST of CsGy7G001920 vs. NCBI nr
Match: KAE8645701.1 (hypothetical protein Csa_020284 [Cucumis sativus])

HSP 1 Score: 229 bits (583), Expect = 1.13e-75
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MENMKMQQPVYHEEGSKELRKNCESFEAKIFAKVTSGKPGTVTGDSLSRFDRQKYRDFML 60
           MENMKMQQPVYHEEGSKELRKNCESFEAKIFAKVTSGKPGTVTGDSLSRFDRQKYRDFML
Sbjct: 1   MENMKMQQPVYHEEGSKELRKNCESFEAKIFAKVTSGKPGTVTGDSLSRFDRQKYRDFML 60

Query: 61  YMKPLYIRYGGSWNDNKQCYTGGQLKDLRAAEDVDNVIRDVRIKRRGKEG 110
           YMKPLYIRYGGSWNDNKQCYTGGQLKDLRAAEDVDNVIRDVRIKRRGKEG
Sbjct: 61  YMKPLYIRYGGSWNDNKQCYTGGQLKDLRAAEDVDNVIRDVRIKRRGKEG 110

[Close]

BLAST of CsGy7G001920 vs. ExPASy TrEMBL
Match: A0A0A0K4Z1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G027780 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.23e-06
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 0


Query: 87  DLRAAEDVDNVIRDVRIKRRGKEG 110
           DLRAAEDVDNVIRDVRIKRRGKEG
Sbjct: 34  DLRAAEDVDNVIRDVRIKRRGKEG 57

The following BLAST results are available for this feature:

BLAST of CsGy7G001920 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy7G001920 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8645701.1	1.13e-75	100.00	hypothetical protein Csa_020284 [Cucumis sativus]	[more]

BLAST of CsGy7G001920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4Z1	1.23e-06	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G027780 PE=4 SV=1	[more]

BLAST of CsGy7G001920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G001920.2	CsGy7G001920.2	mRNA