CsGy7G000283 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G000283
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr7: 371493 .. 376488 (+)
RNA-Seq Expression	CsGy7G000283
Synteny	CsGy7G000283

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAACCCAAACCCACGTTTGGGGCCCGTATAATGGAAACCCTAGTTTTAGGGTTTCCATTACATGTCTTCACTTCATCTTTCATTCGTTTTTCTCCCCGGTTTACTTCCTCTCAACTCGTCTTCAATCTCTGTACACTACTTGTCCTTTAAGCCGTTTAATCCTTCCAATCGAAATCATCCCCTCTCTTCAATCCTTGTAACGACATTGATTTTTCTTTCATTTCGGAAAGAAACTTTTTCCTTTTTTCGTCAACTCACCTTCAACATATTCCGATTTAGGTTTGGCCGTCGTTTTCTTCTCGGTAAAAAATATATCTTCCTCTAAATTCCTCTCTCCCACTCTTCGTCCTCCCAATTTTCGTTGAAGGCTTCGCTCACCGTGTTGCCTCCGAAACAAATGGATCTTCTGTCGGTTTCGTTGATCGGCTGTGTTTTACATTTTGCCTCCGAAACCTTTGCGCTTGCATGTTCACTACTGTTATTGGTGAACATGCAATCCGGCTCGATTTTCCCCTTCCAGAAGACCTTGCCGCTTGGACTCCCACTTGCCGATCGGGTAATTCTTTTCCCTTTGATTTGGACACATTCTACTACGGATACTATCACCCACTGCATTTGGGATGTTCGAGCAAGGTATGGTTGGAGGTAAGTGGTTGAATTTCGAGTTTCTTTCTTTGTCGATGATGAGGATTAGGGTTATGCACTGTCTGAATAATTTTCTTTCTGATTAGTTCTGTTCTGTGCATAATTATTTGTAATCGTTTTTGTTTTTTACTTCTATTGTTTTTCATATTCGGTCATCCCAATCTGTTTACTTTCGATGTTTCTGATTACTATTGTTCCTGTAGTTTTTTGAAGTCAGTTCTGTGTATGTGTATCTGTCAAAATTTTTGTCTATGTGCTTCAACATATGTCCATGTTTGCCATGTTTCTAATCTCCTTCCGTATTGCCCATCAATATTGTTTAAGTTATACTTATGTGAACCCTAATTTCTGTTATATTGTTTAAATTTTTCCCATCTCTGTTAACTCATATGTCCCTGTTTGCCATGTTTCTAATCTGTTTTGTTGGTTTCACTTTGTTGTTGCTACTGTGCGTAATCTGAACACATTTTGTACCATTTTTTTTAATATTATCCCTCATCAATACGCTGACATATTTATTTCATTTGGCACTTTGACTAACTATGTTCACACTTCCCATTTACTTGCAATCAATATGACTTCTGAATTTGCTTTGACGACAAGTCTTTTCTCTTTACTTGCAAGCAACTGTTCTGTTTCTTTCTCTTTATTTCTAAGCAAATCTCATTCATCTATCCATTAAACTGCACTGTCTGGGTTCATTTTATTTTTTGGTTATTTATTTGTCTACTCATAGCTTATCTTTATCTTAGTTGTAGGTTTTGACCATTTGCTTCCCTGTTCTGTACACTTCTGTAATTTGCAGAGATTCCTCTTTTTTTTTTGGTATGAGTGAATAAACACATACTTTATTCACCCTCTAACCCTCTATATATACCACTTCCTTTGTTGTATTTTATTGTGTTGTTTTCCTTGCTTTCTCCCCCGTGCTTTCTTTATTTGGTATGTAACTTAACTTTGTTTTCTTCTTTTCTACTTCTATTTCGCCTTCTTTTTTCTTTTGCCATATCTATATTAAGTAGATTCTGTTATGTTTAAAGCATATTTGTGTAGATGTTTTATGCTTATTTGGTTGCATTTGTATAGCTATATATGTTTTGCTGCACATCCTATTGTTGCTTCTTTTTGTATTCTTGTTTGTAATAATTGATCCAGTTCGTTACACCGAACGAATTCAATTCCTCTGAGGCACAACGTTTTTTTAAATAACACGACCTAAATTGCTCATTCATTTTAATCAATCTTCTTTTTTCAATTTCACCTTGACATTCCTCCAAACAATAGGGTACGTAATCGATACACCTCATCCTTATACTATTTGTACTTGTACTTTTCTTATGTCGGTACACTAATTTCATTTCTTTATTTGCAGGATATCTGACTTCTTACTTCGTTCGTTAGAGGTATGAGGCATTGGCGCTTTATATTGTACTACTTTATTTTCAAATATTGTCAGTTAATACTTTTGCATTCTTCCATTATTGTACTTCGGACTTTAGTCAGCATATTTGGTAATAAAGAATTCTATTTTTTTTTTCATGATTCCAAATGTAACTGTATTTTTTTACTTGAAAGTTTGTTTCGGTTTAAAAAAAGGTCTTCATTTTTAAAAATTTTCATACACAAAGTGTATACCCACACAACCATATCAGTAGAATGAAACTCGAAATCACAATGAATCTATTCAAAGTGAAAAAATTATTTTTGCAATAACTATTTTAAAAAAATTGCATAAAAAATGCTATTTTTGGTTGACAAAGCCTATTGTGAACATCAAATGCCATTTTCTAGAATTTTATTACTTTTATTTTTTCGTACCAAGGTTATGTAATTTTACCATCAATTTTATTTTGAGAAAACGTGTATAGTTTGTTATAAAATAAATACAATGACATAAACATTTGTAAAAAAATACATTTCCAACTGAAAATAAACAAAATTTTCACGGGCATTTGTAAGCAATTGTAAACAAATACATTTCCAACCGAAAATTTTCACGAGCATTTGTAAACAATTGAAAGCCTTTTTTGAAAATGTGGAAGAAACATTTTTTTAAAAAAAGATAAAGAGAAAATATGGCTGAAACAAATTTTAAAATAAAAGGAAAAATAATAACACTTTCGATATTAGCCAACTGATAGACCACATCGTACTTCTTTTTCAAAAAATAGTCAATTGTTTTCTTTCGATATTAGCCACGCTTTTTAAACTGAACAACATGAATTTCGAACAGTTTGTTTTTGTTTACAGTTCGAACATACTCATACTAGTAACATATTGTTGATGCATAAGTTCATTTTACATAATTATATGTTAGAAGTACGTAAATATTTATACTAATGTATGCATTTAAGGTATACTAGCATTAAAGTGCTAAAAATAGATCGTGAGGTTTGTAGGCACTACCCTGAAATGGATAACCAAAACATTCGCACTATACTAGCCGTCTTCACATCCACCCATAATCAGTTAATACTGCTATTGGATGCACTAATGAATGACAATAAGCGGGTGACCCATACACCGTACGAATTTAAGCATCAAATTAGACAACTTTCATACTTCCGTATGATACACTCCTCCGACCTCATTTGTCGTGAAAGTACCAGAATGGACAGACGAACTTTTTCCATTCTATGTCATTTACTGAGGATGATTTTTGGTCTGACGTCGACCGAAATCGTCGATGTCGAGGAGATGGTCGCCATGTTTCTGCATATTTTGGCACACGATGTCAAGAATAGAGTCATCCAGCAGAATTTCGTGCGATCAGGAGAGACTGTTTCCCGTCACTTTAACCTCGTATTGTTGGCGGTGTTGCGATTGCACGATGAGTTGTTGAAGAAACCCCAGCCAGTGACTACCACATGCGCTGATTCATGATGGAGTTGCTTCGAGGTCCACATATTACTATATCATGTTACTTATCAATCACCACGTCCAGTGACTAACTGGGTGGTATTTCATTCTGCAGAACTGCCTTGGGGCATTGGATGACACGTACATCAAGGTGAACGTGCCGCAAACCGATAGGCCTAGGTATAGAACACGTAAGGGAACATCCTCGGTGTGTGTGATACGAAAGGCGACTTCGTCTTCGTATTGGCTGGTTGAGAAGGATCCACAGCAAATTCGCGCATTCTTCGAGATGCTATTGCACGACCAAATGGGCTGCATGTTCCTCAGGGTAATCAAATGTTTTATGCCTCGAACATATACTTCCTATAACGTCAATCAAATTAGTTCGATCTGACGCATTCGTCACAGGTTATTTCTATCTATGCGACGCCGGATATCCCAATGCAGAGGGATTTCTAGCTCCCTATAGAGGACAAAGATACCACTTGCAAGAGTGGCGAGGAGCGGGAAATGCCCCTGTCACCGCAAAAGAGTACTTCAACATAAAACATCCTGCCGCTAGGAATGTTATTGAACGAGCGTTCGGGTTGTTGAAGGGTCGATGGGCAATCCTTCGCGGCAAATCGTACTATCCCGTGCAAATTCAATGTCGAACAATTCTAGCGTGTTGCCTACTACACAATCTCATCAACCGCGAGATGACGAATGTCGATTTTGTTGACGAAGGAGACTCCACGTACGCCACGATTGGAGGTGATGACATTCAGTTCGTGGAGAACTCAAACGAATGGACGCAGTGGAGGGATGATTTGGCCGCAGAGATGTTCAATGAATGGCAGTTGCGTAACGAATAGGCTTTCATGTCGATTTCGTATTCCTATACTTGTATTTAGTTAGTATTGGGTGTGTCTTCGTGTACGCTTAAATGTATGCATGCAGTATGAAAAACGAATTTGACAATTTTGCCTTCTTGTGTATTTTAATAATTATTCCTTCATGTTTATTGAAGATACTTAAACAAATGCATGGTTGTATGATTGTTAGTATGACAAGTTCATCACGTGCTCCTAAGCATGTATGGACGAAGGAGGAGGAGGCAACCCTCGTCGAGTGTATGGTCGAGTTGGTGTCTGCTGGTGGATGGAAGTCAGACAATGGCACATTCAGACCTGGGTATCTGGCACAACTTCTGTGAATGATGGTTGCAAAGTTGCCGGGATGCAATGTACATGCGACCACAGTGATCGACTGCCGCATAAAGACGTTGAAGCGCTCATACCAGGAAATCGCAGAAATGCGCGGCCCATCATGCGGTGGGTTTGGTTGGAATGACGATGTGAAGTGCATCGTTGCTGAGAAGGAGTTATTTGACAACTGGGTCAGGGTATGTGAAAAGTATAATTGTACACTGATATAATTTTTACTTCAATATGAAACAAGTCTAATATTTGATTTTTCTTTCCTATGTAGAGTCATCCTGCAGCGAAGGG

mRNA sequence

AATAACCCAAACCCACGTTTGGGGCCCGTATAATGGAAACCCTAGTTTTAGGGTTTCCATTACATGTCTTCACTTCATCTTTCATTCGTTTTTCTCCCCGGTTTACTTCCTCTCAACTCGTCTTCAATCTCTGTACACTACTTGTCCTTTAAGCCGTTTAATCCTTCCAATCGAAATCATCCCCTCTCTTCAATCCTTGTAACGACATTGATTTTTCTTTCATTTCGGAAAGAAACTTTTTCCTTTTTTCGTCAACTCACCTTCAACATATTCCGATTTAGGTTTGGCCGTCGTTTTCTTCTCGGTAAAAAATATATCTTCCTCTAAATTCCTCTCTCCCACTCTTCGTCCTCCCAATTTTCGTTGAAGGCTTCGCTCACCGTGTTGCCTCCGAAACAAATGGATCTTCTGTCGGTTTCGTTGATCGGCTGTGTTTTACATTTTGCCTCCGAAACCTTTGCGCTTGCATGTTCACTACTGTTATTGGTGAACATGCAATCCGGCTCGATTTTCCCCTTCCAGAAGACCTTGCCGCTTGGACTCCCACTTGCCGATCGGGTAATTCTTTTCCCTTTGATTTGGACACATTCTACTACGGATACTATCACCCACTGCATTTGGGATGTTCGAGCAAGGTATGGTTGGAGGATATCTGACTTCTTACTTCGTTCGTTAGAGTATGACAAGTTCATCACGTGCTCCTAAGCATGTATGGACGAAGGAGGAGGAGGCAACCCTCGTCGAGTGTATGGTCGAGTTGGTGTCTGCTGGTGGATGGAAGTCAGACAATGGCACATTCAGACCTGGGTATCTGGCACAACTTCTGTGAATGATGGTTGCAAAGTTGCCGGGATGCAATGTACATGCGACCACAGTGATCGACTGCCGCATAAAGACGTTGAAGCGCTCATACCAGGAAATCGCAGAAATGCGCGGCCCATCATGCGGTGGGTTTGGTTGGAATGACGATGTGAAGTGCATCGTTGCTGAGAAGGAGTTATTTGACAACTGGGTCAGGAGTCATCCTGCAGCGAAGGG

Coding sequence (CDS)

ATGGATCTTCTGTCGGTTTCGTTGATCGGCTGTGTTTTACATTTTGCCTCCGAAACCTTTGCGCTTGCATGTTCACTACTGTTATTGGTGAACATGCAATCCGGCTCGATTTTCCCCTTCCAGAAGACCTTGCCGCTTGGACTCCCACTTGCCGATCGGGTAATTCTTTTCCCTTTGATTTGGACACATTCTACTACGGATACTATCACCCACTGCATTTGGGATGTTCGAGCAAGGTATGGTTGGAGGATATCTGACTTCTTACTTCGTTCGTTAGAGTATGACAAGTTCATCACGTGCTCCTAA

Protein sequence

MDLLSVSLIGCVLHFASETFALACSLLLLVNMQSGSIFPFQKTLPLGLPLADRVILFPLIWTHSTTDTITHCIWDVRARYGWRISDFLLRSLEYDKFITCS*

Homology

[Close]

BLAST of CsGy7G000283 vs. NCBI nr
Match: KAE8645648.1 (hypothetical protein Csa_020550 [Cucumis sativus])

HSP 1 Score: 190 bits (483), Expect = 8.44e-61
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MDLLSVSLIGCVLHFASETFALACSLLLLVNMQSGSIFPFQKTLPLGLPLADRVILFPLI 60
          MDLLSVSLIGCVLHFASETFALACSLLLLVNMQSGSIFPFQKTLPLGLPLADRVILFPLI
Sbjct: 1  MDLLSVSLIGCVLHFASETFALACSLLLLVNMQSGSIFPFQKTLPLGLPLADRVILFPLI 60

Query: 61 WTHSTTDTITHCIWDVRARYGWRISDFLLRSLE 93
          WTHSTTDTITHCIWDVRARYGWRISDFLLRSLE
Sbjct: 61 WTHSTTDTITHCIWDVRARYGWRISDFLLRSLE 93

[Close]

BLAST of CsGy7G000283 vs. NCBI nr
Match: XP_031741971.1 (uncharacterized protein LOC116403981 isoform X2 [Cucumis sativus])

HSP 1 Score: 89.7 bits (221), Expect = 1.51e-20
Identity = 56/107 (52.34%), Postives = 65/107 (60.75%), Query Frame = 0


Query: 1   MDLLSVSLIGCVLHFASETFALACSLLLLVNMQSGSIFPFQKTLPLGL------------ 60
           M LLSVSL GCVLHFASET ALACS L LVNMQS SIFPF  TLPLGL            
Sbjct: 1   MGLLSVSLNGCVLHFASETEALACSPLFLVNMQSDSIFPFHTTLPLGLRLDFPLPHNLAA 60

Query: 61  --PLADRVILFPLIWTHSTTDTITHCIWDVRARYGWRISDFLLRSLE 93
             P+    ILFPLIWTHST   ++   + +  + G+  S F+ +  E
Sbjct: 61  WTPICRSSILFPLIWTHSTLRILSPTAFGMFEQ-GYSTSYFVRQRYE 106

[Close]

BLAST of CsGy7G000283 vs. NCBI nr
Match: XP_031741970.1 (uncharacterized protein LOC116403981 isoform X1 [Cucumis sativus])

HSP 1 Score: 89.4 bits (220), Expect = 2.38e-20
Identity = 52/79 (65.82%), Postives = 53/79 (67.09%), Query Frame = 0


Query: 1  MDLLSVSLIGCVLHFASETFALACSLLLLVNMQSGSIFPFQKTLPLGL------------ 60
          M LLSVSL GCVLHFASET ALACS L LVNMQS SIFPF  TLPLGL            
Sbjct: 1  MGLLSVSLNGCVLHFASETEALACSPLFLVNMQSDSIFPFHTTLPLGLRLDFPLPHNLAA 60

Query: 61 --PLADRVILFPLIWTHST 65
            P+    ILFPLIWTHST
Sbjct: 61 WTPICRSSILFPLIWTHST 79

[Close]

BLAST of CsGy7G000283 vs. NCBI nr
Match: XP_031740445.1 (uncharacterized protein LOC116403439 [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 4.61e-17
Identity = 45/53 (84.91%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 1  MDLLSVSLIGCVLHFASETFALACSLLLLVNMQSGSIFPFQKTLPLGLPLADR 53
          M LLSV LIGCVL FASETFALACS +LLVNMQS  +FPFQKTLPLGLPLADR
Sbjct: 1  MGLLSVLLIGCVLLFASETFALACSPMLLVNMQSDLVFPFQKTLPLGLPLADR 53

The following BLAST results are available for this feature:

BLAST of CsGy7G000283 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy7G000283 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8645648.1	8.44e-61	100.00	hypothetical protein Csa_020550 [Cucumis sativus]	[more]
XP_031741971.1	1.51e-20	52.34	uncharacterized protein LOC116403981 isoform X2 [Cucumis sativus]	[more]
XP_031741970.1	2.38e-20	65.82	uncharacterized protein LOC116403981 isoform X1 [Cucumis sativus]	[more]
XP_031740445.1	4.61e-17	84.91	uncharacterized protein LOC116403439 [Cucumis sativus]	[more]

BLAST of CsGy7G000283 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsGy7G000283 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G000283.1	CsGy7G000283.1	mRNA