CsGy6G035680 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATTCGTAGTAGAAGAAGCAGTAGCCTCCTCCCAAACTGCACAAAGAAAATCAGAAATGGGAAACTCTAAGAAGACGGCGGAAGTGAGGGTGGTGCTAATTGAGTACCACCACATTCAAACCGACGCTTCCAACTTCAAGTCCGTCGTTCAAAGTCTCACCGGAAAGCATCCCCCCGCCGCAGAGGACGACGGAGGAGAGATCTGCAGGAAGAGGCAGAGAGTGGTGTCTCAGAATAATAATCATGAGAGTATAACTAATATTAATCAAAGGGTTAAGATGATCCACACCAAGTCGTTTAAGGACTTGGACCGCTTGCTCGCCCTTGAACTTCCTTCCATGGAAGATCTTAACTGGATTCTCACTGATTAATCTTAACTCATTTCATTATACATTGTTTTTTTTTCCCTTCTTTTTCCCAATATCCCTTTGTAACATTCTTCATTTTTTCATCGGGATTTTTTATTATTAGTGTCGTATTATTTTTCCGTTTTATGAGTAAAATTTTCTTCTGCTATCCATCCCTTGAAATCAAAGCTCTATTTATATTTTGTGTGGATGAATAGTTTAAACATGGCTCAAATGCTATATATGTTGCCCACTTTCTTAGAACTTTTACTTACCCCATTACAAGTTCAAACAAATTTACACCATGAAACTACGTTAAAATGAAGGTTGTGATTGAGAACGCCAAGGACAAAAATGAAAATTGGTTGATAATAAAAGATATTTAATTTTGAAAAGAAAAACGATAGATGTCATTAATGTGTTTCACTTTCAAATGTCAGTGAAGACAATAAAGAAAGATGGAAATAAATAATAATAATGATAACAATAATAATAAATGTTATTAAAAAATAGAGAAAAGAAAATTCTTAACTTAGAAGAAGAGAAGAGACGTGAAGGTAAAAAACACACTTCGAAAATTGATGACATCTTCACTTAAGTTTTTGACTGTGCTAGATAATTCAAAAGGAAT ATGAAATTCGTAGTAGAAGAAGCAGTAGCCTCCTCCCAAACTGCACAAAGAAAATCAGAAATGGGAAACTCTAAGAAGACGGCGGAAGTGAGGGTGGTGCTAATTGAGTACCACCACATTCAAACCGACGCTTCCAACTTCAAGTCCGTCGTTCAAAGTCTCACCGGAAAGCATCCCCCCGCCGCAGAGGACGACGGAGGAGAGATCTGCAGGAAGAGGCAGAGAGTGGTGTCTCAGAATAATAATCATGAGAGTATAACTAATATTAATCAAAGGGTTAAGATGATCCACACCAAGTCGTTTAAGGACTTGGACCGCTTGCTCGCCCTTGAACTTCCTTCCATGGAAGATCTTAACTGGATTCTCACTGATTAATCTTAACTCATTTCATTATACATTGTTTTTTTTTCCCTTCTTTTTCCCAATATCCCTTTGTAACATTCTTCATTTTTTCATCGGGATTTTTTATTATTAGTGTCGTATTATTTTTCCGTTTTATGAGTAAAATTTTCTTCTGCTATCCATCCCTTGAAATCAAAGCTCTATTTATATTTTGTGTGGATGAATAGTTTAAACATGGCTCAAATGCTATATATGTTGCCCACTTTCTTAGAACTTTTACTTACCCCATTACAAGTTCAAACAAATTTACACCATGAAACTACGTTAAAATGAAGGTTGTGATTGAGAACGCCAAGGACAAAAATGAAAATTGGTTGATAATAAAAGATATTTAATTTTGAAAAGAAAAACGATAGATGTCATTAATGTGTTTCACTTTCAAATGTCAGTGAAGACAATAAAGAAAGATGGAAATAAATAATAATAATGATAACAATAATAATAAATGTTATTAAAAAATAGAGAAAAGAAAATTCTTAACTTAGAAGAAGAGAAGAGACGTGAAGGTAAAAAACACACTTCGAAAATTGATGACATCTTCACTTAAGTTTTTGACTGTGCTAGATAATTCAAAAGGAAT ATGAAATTCGTAGTAGAAGAAGCAGTAGCCTCCTCCCAAACTGCACAAAGAAAATCAGAAATGGGAAACTCTAAGAAGACGGCGGAAGTGAGGGTGGTGCTAATTGAGTACCACCACATTCAAACCGACGCTTCCAACTTCAAGTCCGTCGTTCAAAGTCTCACCGGAAAGCATCCCCCCGCCGCAGAGGACGACGGAGGAGAGATCTGCAGGAAGAGGCAGAGAGTGGTGTCTCAGAATAATAATCATGAGAGTATAACTAATATTAATCAAAGGGTTAAGATGATCCACACCAAGTCGTTTAAGGACTTGGACCGCTTGCTCGCCCTTGAACTTCCTTCCATGGAAGATCTTAACTGGATTCTCACTGATTAA MKFVVEEAVASSQTAQRKSEMGNSKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHPPAAEDDGGEICRKRQRVVSQNNNHESITNINQRVKMIHTKSFKDLDRLLALELPSMEDLNWILTD* Homology
BLAST of CsGy6G035680 vs. NCBI nr
Match: KGN49401.1 (hypothetical protein Csa_003856 [Cucumis sativus]) HSP 1 Score: 241 bits (614), Expect = 5.93e-80 Identity = 122/124 (98.39%), Postives = 122/124 (98.39%), Query Frame = 0
BLAST of CsGy6G035680 vs. NCBI nr
Match: KAA0052539.1 (VQ motif-containing protein 1-like [Cucumis melo var. makuwa] >TYK13287.1 VQ motif-containing protein 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 173 bits (439), Expect = 1.41e-53 Identity = 91/104 (87.50%), Postives = 95/104 (91.35%), Query Frame = 0
BLAST of CsGy6G035680 vs. NCBI nr
Match: XP_038881537.1 (VQ motif-containing protein 10-like [Benincasa hispida]) HSP 1 Score: 140 bits (353), Expect = 2.34e-40 Identity = 81/114 (71.05%), Postives = 88/114 (77.19%), Query Frame = 0
BLAST of CsGy6G035680 vs. NCBI nr
Match: KAG7034723.1 (hypothetical protein SDJN02_04453, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 104 bits (260), Expect = 2.25e-26 Identity = 57/106 (53.77%), Postives = 70/106 (66.04%), Query Frame = 0
BLAST of CsGy6G035680 vs. NCBI nr
Match: KAG6581431.1 (hypothetical protein SDJN03_21433, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 103 bits (258), Expect = 4.54e-26 Identity = 57/106 (53.77%), Postives = 69/106 (65.09%), Query Frame = 0
BLAST of CsGy6G035680 vs. ExPASy TrEMBL
Match: A0A0A0KNW8 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G523420 PE=4 SV=1) HSP 1 Score: 241 bits (614), Expect = 2.87e-80 Identity = 122/124 (98.39%), Postives = 122/124 (98.39%), Query Frame = 0
BLAST of CsGy6G035680 vs. ExPASy TrEMBL
Match: A0A5D3CN21 (VQ motif-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009060 PE=4 SV=1) HSP 1 Score: 173 bits (439), Expect = 6.84e-54 Identity = 91/104 (87.50%), Postives = 95/104 (91.35%), Query Frame = 0
BLAST of CsGy6G035680 vs. ExPASy TrEMBL
Match: A0A6J1CYB0 (uncharacterized protein LOC111015700 OS=Momordica charantia OX=3673 GN=LOC111015700 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 8.55e-21 Identity = 53/107 (49.53%), Postives = 69/107 (64.49%), Query Frame = 0
BLAST of CsGy6G035680 vs. ExPASy TrEMBL
Match: A0A6J1KT83 (VQ motif-containing protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111497400 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 5.14e-19 Identity = 55/112 (49.11%), Postives = 65/112 (58.04%), Query Frame = 0
BLAST of CsGy6G035680 vs. ExPASy TrEMBL
Match: A0A6J1EF02 (VQ motif-containing protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111433561 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.93e-18 Identity = 53/111 (47.75%), Postives = 66/111 (59.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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