CsGy6G033950 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G033950
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr6: 30403422 .. 30407928 (-)
RNA-Seq Expression	CsGy6G033950
Synteny	CsGy6G033950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACAAGGTTAGCCTGCTTTTCCGATGTTTTTATTTATTTATTTTTTATTTGTGGATTTGCTTTACTAGACATCTGTTTTTTACCACTGTCATATTACAAGAAAATACGAAACTATGGTCGTCCATGAGTATTTATTTTCTTTTTGAATGAAAGAACAAAGTGGCCTAAAAAAACCATCATGAACCAAAAAGTCGCCACTAGAACCACAATTACTGAACAGTTCTGCAATTGTGGGTCATCACAAAAAATATAATACAAATTGTTGCAAGAAATACAAAGAGAGTATTAAAGTGAACTTCTCATCACACTTCCCCCAAGAACTACCCTTTCCATGAAAAGCTCGTCTGTTCTTCTCCCACCTAATATTCCATAACACAGTGAAGAAACCAATATGTCATAGGATTCTTTACCTCTCTTCCGAAAGCAAGGAGGCAACAATACCTCTTTCGGGCGTAGGACACTCTCAGTCTCAGCCAAAACAACTTGTAATGACTGAAAAAAAAACCTAAAATGGACTTTCCTGAAAAAGGGCAAAGCAGAAAGATTTTATTTTAGTTTGACTGGATTCTCTTCGTCTCATTCTACATTTGCTGTATCTACGAAATACTTCGATGTGGCTATGCTTCATTCTTTGGCAGATATAAGTTATCTGTTGCTTTATAATTGCGGGAAATAGGGATATATGATGGAAAATCATTCTCTTAATTTCAAAGTTTAACAAATTTACCGAGTAACGAGGGAATGATTCCCTTTGTGTGGGCTCAATCCTCAAACTTTGGCACCGTTCCCTTTCGAGAATGTTGAATAATTCTATTATCGCCCCTTAATTTTACTATGCTCTACCGCTACCCTTTTTTTTGGCTTTTTGTTTCTCTTTTCTCTGCAGGTTCCATACAAGTTTGATATTGATTCTCTTCACAGATATTAGCAGATCATATCTGTTTTGATCTTCTTACATCAATGCAATATCGAAACATTTTTTTTCCCATTCCTTATTCTGAATCTCTGATTCATTCTCATCCACATTCCTTACACCCCTCCTGCATTCTACTATTTTACTAAAGTATAATTCACCCCCGAAGTAATGGATGTCTGAATATGGCCAATATTATATGCCTGTATTGTTCTAGTTTCACTTCCTTGTGCTAACATGGAAAATACAGTCAAGATTATTTTAACTTTTTAGCTCATCAATTTAACATGGTGATTGAATTCGCATTAAAATTAGAACCTCTAAGAAACTTGAAGATGGAATTCAAATTGAATCTCAGTTTCATGATACCATTTTACAAATATCTTTTGCTTTTCTGAACCTTCCTGATAAAGTCGACCATTTAATACTAAGTTGCAAATGGTGAATTATGCCCCATAGGAAGATTTGTTTAGTGACTTCTCAGTAATTTTGGCATATGATTTGATTCAACTTCAAATTCAAAACTGTGCGAACTCTGTTCATCGCTAGGTTTGAAGAGGGGCCGGACGGACCCTAAGTTATGACAAAGATTTCAGGCTTTTTCTGAGCAGAACAGTACTGTTAACTTAAATAATTATGCCAGAATGAGTCTAATTTAACTAGTTGAAAATTTTAATTATCCGTCTCATTAACCCAAAATAATTGTATTTCTACATTCACTTTCTTTCCAACTCTATCACTTGTTTGCATCTTTAAAACTTTGCAGAAGATTCAATTTCAGCTGTTAGAAAATAACCGAAGTGGGGCTGTCTGGAAAGTAAATGAAATAGATACTAAACACTTGGATTGCCGTATGGGTAGATGAAAGAACCTAAATGAAGGAGTGGATTGATCAAGGATGACAAAGGAGACCTTAGGATCAGTTTCTCTCAAAACAAAACCAAGACCAAAATCGATTAATAATTGTAGATCATATCATAAGCATAGATATACAGAAATGGAACTAGATGGCTTCTAATCAAGAAAGAAGAAGAAAATGAACAGGCAAAGTGTCAATCTGCCTATCAAGAAAATTCACTCAGATTTCACCAAAAGTACAAAAACCCACATGGCAGAGTGATTCAAATTTGAACTAGCTTGAAATTTAGCATGTGTTTCACTTGCGACAGCTTCAAATTTGCATAATCCATCGTCAAAATTTAGAGCGTAGCTGCAAGGATCATACTGAAACCTGAACTGCTGCTTGCTTCCGTTCTTGATGGCTTTCTTCATCGCAGCTCTCATCCTCCAGAACAGTTTCTTGAATTGCTTTCTACTGTAAGTATTCATCCATTCTATGCCTCCCACAAATCCCATTTATACAACGTCAACCTCTAAACTCTAAAATTTCTGCTGCTAATCCCAAAATGTCTTGAAATGAAGAGCAGGTTGTGATAGTTTCTGGGTATTTGAGGAAGATTATAAAGGATTCACAGACACAGAGACAAACAATAGCAGTTGCAATCTGAGGTTTGTGCAGAAGTGTCAGAACCAAAACAACAAAAGACGATTCGCCTTTTTGTATACAGAAGGAGGGCGAAATGAGAGAGGGCAAAGCGTAATCTTTTGGCCTTCCAATGAAGCTGCGCAGTTTATGTTGAGCCTCTACGATGATCGGCCTTTTCTCCTTGGAGTCATGTTGGAATGCTCAAATTCCATCAACTACAGCGATAAAGACAGAGAAGGAGTAGGAGAAGGAAAAGGAGAGAGAGAGAGAAAGAGAGGGAGAGCTAATAGCAATTGCAGTGGGCAGAGAGCCTACAGAGACATATCAATATCGAATATTGTTGCGGCAAAAGTAACGAAGGAAGGTGACTATGTTCAACGGTATGTCTTCGGTCTTCGCCTCTTTCACGGGCATAAAAGTATTTATGTTCCACTAAACTCCTTAACCATCTCTATGGTTCCTTAAAAGCAAGGAATAAACTTCCTTTTGAACATTCTTAAAAAACAAAGTACAATTTTTTTACAGAAAATGATTATAACAATTCAAACCCGTTCTCCGTTATGAATTTAACAGAAAAATACTGCTGCAGGAATCCTGTGGGGTATTAGTCCAAAACCCCACTTAACAGAAACTGAGCCTTGTGGTTCAGAATAAAATAAAATCAATAGGTCAAAACACTTCTTTAGTTCTTTTATTTTGAACTTTGGCTTGTGTGCACTCTTTCAAGGAAAAGAAAAAAGGAATACACACACCTACATCGAAGTATCGTGTACAATTAGTGTTGAAAATCAAATGATCTAGGTTAAGAACTACAGATACGAGGATTAAAGCCTTGATTAAAAATCTAGGAATTAGAGTTGTATTTTACTTTGAACCAAATTAGTATATAATGGTGTCCTATGGAACAGAAACTGTTGTATTGATCAATCAAATCAGAGTTTGGCTATCTTATCCACTGATTTGTCTCCTATACCAGGCAAAGTGGAGAAACTTGATACATCTTGGTAACTTTATAGGATTTCTAGGTCTTATAGCTCTCACACGCTCTTTTCCATTGCCCTTTTACTTTTTTCCATTTAACCAATAATCTCTTTTTTGTCTCACTCCATCTCTCTTTCTCTCTCTCTCCCCCATACAATCTTGGGGTCTTTTGCCATCGCCCCCTTTACTGTGCAGAATTACATAATGCTACGAAGGGAGATGGGGATCATCCTTTGGCTAATGACTTGTCACTCTAGCCAACTACGTGACCCTTGTCTTCTTTTTCAATTTACCTTTCTGTAGGGTCATTATCCTATAGAAAGTTGAGTCTTAGAGATAATTGTCTGTTTTTCCATCAGCTATGCTAAAGTCTTCCACATGACATTATTTTCTCATGGTGGGGTCCCTCTTCAGTTTTTCTTTCTTAATGGGTTACCACAAGCCGGGGATAGGATTTTTTTTGGGTGGACCCCCAAGTGCCACGTGTCTAGATCATAGGGTCGGGTGATCAGAAGACTGATCCTCCCAATAAAGGCTCTTTGTTGATGTTGTTCAGATGGGTGGGGGGGTATGGAAGGAAGGCCCATATTCCAAATTCTCCTTTTTCAAATATAATTTGGCTACCATTAATGCCCGTTGCCATTCCCTCGCAAGATCGTTTTCCCATTTGTACAAACGCCATTCGGTCTTCTTCTACCTTTTCTGCAGATTCTCTCTGCAACAACCGATGCCTTATCAGAATTTTCTGTCATTTTATTACTTTCTCTTCCTCATCGAATATATTATCTTCTATATTTTTGCTCTTTTCGTTGTCTTTTGTCCATTTCACTTTCTATATACTAAAGTGTAGGTTTAAATTTAAGTACTGTTTTTGAATTTCATTCTATTTTAGTAGTGGCTCTTTCAAATTTCAAATTCAGTTCCGAAACTCTAAATGAATTTTAAAATTGGCAATTTCAGATTAATATTAATTAAAATGTAATTAAGTAGTAATAATAATAATAATTTACAAATTCCTGTAGGACATTTGAACTTAAAATTTATTTTACATAGTGTAGTACTTAGAATTGATATGAACTAATGTTAAGCTATTTCGTTTCAGCAAAACAAATGCGGAGGGTTGA

mRNA sequence

ATGCACAAGAAGATTCAATTTCAGCTGTTAGAAAATAACCGAAGTGGGGCTGTCTGGAAAAGCGTAGCTGCAAGGATCATACTGAAACCTGAACTGCTGCTTGCTTCCGTTCTTGATGGCTTTCTTCATCGCAGCTCTCATCCTCCAGAACAGTTTCTTGAATTGCTTTCTACTGTAAGTTGTGATAGTTTCTGGGTATTTGAGGAAGATTATAAAGGATTCACAGACACAGAGACAAACAATAGCAGTTGCAATCTGAGGTTTGTGCAGAAGTGTCAGAACCAAAACAACAAAAGACGATTCGCCTTTTTGTATACAGAAGGAGGGCGAAATGAGAGAGGGCAAAGCGTAATCTTTTGGCCTTCCAATGAAGCTGCGCAGTTTATGTTGAGCCTCTACGATGATCGGCCTTTTCTCCTTGGAGTCATGTTGGAATGCTCAAATTCCATCAACTACAGCGATAAAGACAGAGAAGGAGTAGGAGAAGGAAAAGGAGAGAGAGAGAGAAAGAGAGGGAGAGCTAATAGCAATTGCAGTGGGCAGAGAGCCTACAGAGACATATCAATATCGAATATTGTTGCGGCAAAAGTAACGAAGGAAGGTGACTATGTTCAACGCAAAACAAATGCGGAGGGTTGA

Coding sequence (CDS)

ATGCACAAGAAGATTCAATTTCAGCTGTTAGAAAATAACCGAAGTGGGGCTGTCTGGAAAAGCGTAGCTGCAAGGATCATACTGAAACCTGAACTGCTGCTTGCTTCCGTTCTTGATGGCTTTCTTCATCGCAGCTCTCATCCTCCAGAACAGTTTCTTGAATTGCTTTCTACTGTAAGTTGTGATAGTTTCTGGGTATTTGAGGAAGATTATAAAGGATTCACAGACACAGAGACAAACAATAGCAGTTGCAATCTGAGGTTTGTGCAGAAGTGTCAGAACCAAAACAACAAAAGACGATTCGCCTTTTTGTATACAGAAGGAGGGCGAAATGAGAGAGGGCAAAGCGTAATCTTTTGGCCTTCCAATGAAGCTGCGCAGTTTATGTTGAGCCTCTACGATGATCGGCCTTTTCTCCTTGGAGTCATGTTGGAATGCTCAAATTCCATCAACTACAGCGATAAAGACAGAGAAGGAGTAGGAGAAGGAAAAGGAGAGAGAGAGAGAAAGAGAGGGAGAGCTAATAGCAATTGCAGTGGGCAGAGAGCCTACAGAGACATATCAATATCGAATATTGTTGCGGCAAAAGTAACGAAGGAAGGTGACTATGTTCAACGCAAAACAAATGCGGAGGGTTGA

Protein sequence

MHKKIQFQLLENNRSGAVWKSVAARIILKPELLLASVLDGFLHRSSHPPEQFLELLSTVSCDSFWVFEEDYKGFTDTETNNSSCNLRFVQKCQNQNNKRRFAFLYTEGGRNERGQSVIFWPSNEAAQFMLSLYDDRPFLLGVMLECSNSINYSDKDREGVGEGKGERERKRGRANSNCSGQRAYRDISISNIVAAKVTKEGDYVQRKTNAEG*

Homology

[Close]

BLAST of CsGy6G033950 vs. NCBI nr
Match: KAA0052708.1 (hypothetical protein E6C27_scaffold120G003210 [Cucumis melo var. makuwa] >TYK13116.1 hypothetical protein E5676_scaffold255G007260 [Cucumis melo var. makuwa])

HSP 1 Score: 184 bits (466), Expect = 3.88e-55
Identity = 96/155 (61.94%), Postives = 104/155 (67.10%), Query Frame = 0


Query: 52  FLELLSTVSCDSFWVFEEDYKGFTDTETNNSSCNLRFVQKCQNQNNKRRFAFLYTEGGRN 111
           FL       CDSFWVFEEDYKGFTD ETN +SCNL+FVQ+CQNQNNKRRF FLYT GGRN
Sbjct: 14  FLNCFLLAGCDSFWVFEEDYKGFTDAETNKNSCNLKFVQECQNQNNKRRFTFLYTGGGRN 73

Query: 112 ERGQSVIFWPSNEAAQFMLSLYDDRPFLLGVMLECSNSINYSDKDREGVGEGKGERERKR 171
           E+GQSVIFWPSNEAAQFMLSLYD+    +G+                             
Sbjct: 74  EKGQSVIFWPSNEAAQFMLSLYDE----IGLF---------------------------- 131

Query: 172 GRANSNCSGQRAYRDISISNIVAAKVTKEGDYVQR 206
                +  GQRAYRDISISNIVAAKVTKEGDYVQR
Sbjct: 134 -----SLDGQRAYRDISISNIVAAKVTKEGDYVQR 131

[Close]

BLAST of CsGy6G033950 vs. NCBI nr
Match: KGN49203.1 (hypothetical protein Csa_002915 [Cucumis sativus])

HSP 1 Score: 154 bits (389), Expect = 1.59e-44
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 129 MLSLYDDRPFLLGVMLECSNSINYSDKDREGVGEGKGERERKRGRANSNCSGQRAYRDIS 188
           MLSLYDDRPFLLGVMLECSNSINYSDKDREGVGEGKGERERKRGRANSNCSGQRAYRDIS
Sbjct: 1   MLSLYDDRPFLLGVMLECSNSINYSDKDREGVGEGKGERERKRGRANSNCSGQRAYRDIS 60

Query: 189 ISNIVAAKVTKEGDYVQR 206
           ISNIVAAKVTKEGDYVQR
Sbjct: 61  ISNIVAAKVTKEGDYVQR 78

[Close]

BLAST of CsGy6G033950 vs. NCBI nr
Match: KGN49204.1 (hypothetical protein Csa_003775 [Cucumis sativus])

HSP 1 Score: 119 bits (298), Expect = 4.85e-31
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0


Query: 1  MHKKIQFQLLENNRSGAVWKSVAARIILKPELLLASVLDGFLHRSSHPPEQFLELLSTV 59
          MHKKIQFQLLENNRSGAVWKSVAARIILKPELLLASVLDGFLHRSSHPPEQFLELLSTV
Sbjct: 1  MHKKIQFQLLENNRSGAVWKSVAARIILKPELLLASVLDGFLHRSSHPPEQFLELLSTV 59

[Close]

BLAST of CsGy6G033950 vs. ExPASy TrEMBL
Match: A0A5D3CRT7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007260 PE=4 SV=1)

HSP 1 Score: 184 bits (466), Expect = 1.88e-55
Identity = 96/155 (61.94%), Postives = 104/155 (67.10%), Query Frame = 0


Query: 52  FLELLSTVSCDSFWVFEEDYKGFTDTETNNSSCNLRFVQKCQNQNNKRRFAFLYTEGGRN 111
           FL       CDSFWVFEEDYKGFTD ETN +SCNL+FVQ+CQNQNNKRRF FLYT GGRN
Sbjct: 14  FLNCFLLAGCDSFWVFEEDYKGFTDAETNKNSCNLKFVQECQNQNNKRRFTFLYTGGGRN 73

Query: 112 ERGQSVIFWPSNEAAQFMLSLYDDRPFLLGVMLECSNSINYSDKDREGVGEGKGERERKR 171
           E+GQSVIFWPSNEAAQFMLSLYD+    +G+                             
Sbjct: 74  EKGQSVIFWPSNEAAQFMLSLYDE----IGLF---------------------------- 131

Query: 172 GRANSNCSGQRAYRDISISNIVAAKVTKEGDYVQR 206
                +  GQRAYRDISISNIVAAKVTKEGDYVQR
Sbjct: 134 -----SLDGQRAYRDISISNIVAAKVTKEGDYVQR 131

[Close]

BLAST of CsGy6G033950 vs. ExPASy TrEMBL
Match: A0A0A0KI11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517110 PE=4 SV=1)

HSP 1 Score: 154 bits (389), Expect = 7.70e-45
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 129 MLSLYDDRPFLLGVMLECSNSINYSDKDREGVGEGKGERERKRGRANSNCSGQRAYRDIS 188
           MLSLYDDRPFLLGVMLECSNSINYSDKDREGVGEGKGERERKRGRANSNCSGQRAYRDIS
Sbjct: 1   MLSLYDDRPFLLGVMLECSNSINYSDKDREGVGEGKGERERKRGRANSNCSGQRAYRDIS 60

Query: 189 ISNIVAAKVTKEGDYVQR 206
           ISNIVAAKVTKEGDYVQR
Sbjct: 61  ISNIVAAKVTKEGDYVQR 78

[Close]

BLAST of CsGy6G033950 vs. ExPASy TrEMBL
Match: A0A0A0KK41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517120 PE=4 SV=1)

HSP 1 Score: 119 bits (298), Expect = 2.35e-31
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0


Query: 1  MHKKIQFQLLENNRSGAVWKSVAARIILKPELLLASVLDGFLHRSSHPPEQFLELLSTV 59
          MHKKIQFQLLENNRSGAVWKSVAARIILKPELLLASVLDGFLHRSSHPPEQFLELLSTV
Sbjct: 1  MHKKIQFQLLENNRSGAVWKSVAARIILKPELLLASVLDGFLHRSSHPPEQFLELLSTV 59

The following BLAST results are available for this feature:

BLAST of CsGy6G033950 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G033950 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052708.1	3.88e-55	61.94	hypothetical protein E6C27_scaffold120G003210 [Cucumis melo var. makuwa] >TYK131...	[more]
KGN49203.1	1.59e-44	100.00	hypothetical protein Csa_002915 [Cucumis sativus]	[more]
KGN49204.1	4.85e-31	100.00	hypothetical protein Csa_003775 [Cucumis sativus]	[more]

BLAST of CsGy6G033950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CRT7	1.88e-55	61.94	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KI11	7.70e-45	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517110 PE=4 SV=1	[more]
A0A0A0KK41	2.35e-31	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517120 PE=4 SV=1	[more]

BLAST of CsGy6G033950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G033950.2	CsGy6G033950.2	mRNA