CsGy6G031120 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G031120
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionB-box zinc finger family protein
LocationGy14Chr6: 28989538 .. 28991339 (-)
RNA-Seq ExpressionCsGy6G031120
SyntenyCsGy6G031120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGACACAAACCAAATCTTTCACTTCCTATTAATTCCTTAACATATTTTTTTTTCTCGAACTCTCCTCTTGCTGACAATTCCACCCACCTCATCTTCCTTTTATCCTTTCTTTTATATTATATTATCTTCTTCATCTTCTTCTTTCTTCTTCCTTTTTTTTCTCTTTCTATTATTGTGTGTCATTGTTCTACATTATTGTTATAACCTAACAACACCGGCCGACACCAAAGCAAAGATAATAGACATCATCATCAATTATCTGAAACTCGGGGGAAACGACCAAAAAGATTCAATTTTTAAGACACCCTTTATTAAATTTTCAGGTTTTTATTGATCTAGAGTTATGTGTGTGTTTTCTATGAGATGGGTTTTTGAGATTGAACGTAAAAGTTTTGATCTTTTTTAATGGTTTGTTTTTTTTTTATTTGTTTTTTTTTCATGTTTGTGGGGGTGTGGCAATGAGGTGTGAGGATAGAAGGTATCAGTTTTGAAATGAGGATACTTTGTGATTCTTGTGAAAGTGCTCCAGCTACTTTGTTTTGTGCTGCTGATGAGGCTGCTCTTTGTGCAATTTGTGATACAAAGGTTTTATGATCATAATTATTATGTTATCAAAAGCAACCAGTGTGTTTCTTTGTTTATTTTCATGATTTTATCGAAGTGTGTGTTTTCTTTTTTCTTTTGTTGATTTTTTGGATTGTTTTTATATGTATTTGGGAAAGGTACACATGTGCAATAAGCTTGCGAGCCGTCATGTAAGGGTTGGGCTTGCAAATCCAAGTGAAGTTCCTCGCTGTGATATTTGTGAAAATGCACCAGGTATAATTATATATATTGTTTTTTTTTTCCCTTTTTTTGTGTGAGGGTTTGGATGGTTTAACAATTATTCTTTGTGAAATTAATAATGTAATTTGCAGCTTTCTTTTACTGTGAGATAGATGGTAGTTCCTTGTGTTTACAATGCGACGTGATCGTTCATGTTGGTGGTAAAAGAATGCACAAGAGATATCTCCGTCTGAGGCAGAGAGTTGAGGTCTGTGATTTTTAATATCAAATCCTATAATGCAATGTTTTTTTTCTCATCACTTCATACAATATGCCTCCATATTTTGGATTAGTTGACCAATGTTGATAGAAAAAAGAAAAGAAAGAAAGTATATATTGAAGAATGATCAAAGGATATAGAATACTATAGTAATGGAAATATCTACCAATCTTGGTTAATGTTTCTGTTTAGCATGCATTCATACAGAATAATGTAAAGAGGACTAAGGTTTTGTTTGGTAATGAATCTTGCAGTTTCCAGGGGATAAACAAAATGATGTGAAGGACCTAAATGTAAAACCGACGGAACAGGTTGAGAAAGTAAAAAGCCAAAATGAAGAGAGGGGTGAGAATGAAAAGCATGAAGAGTTGAGGGTGTCAGGTGTTACAAAAGATTATTCAAATGGAGATGGGCATTCCAAGCGGCCTAATAAAGTGATTGATTTAAACATGTAGTGCTTCAATAAATTTAGATGCTTAATTTTGATTTTTGGAATATTTCCAGCAATAAGGTGGGAAACATTTTTCAAACAGTTTTAAGTTTAGGAAACGAGGTTGAAATGCTGTGATAAATCTCTACCGTTCTAAATTTTTATTTTGGAACTGAACCTAAGGCAAAGGCAAAGGCAAAGCCAAAGTTCCACTGTATTGTTCTCTTTCTTTTCTACCCGCATCATGAGTGATCCTAAAAAGATTCAACTTGAATTAGTGCTTTTAACAAAAGCACCTGTATTTATAAAGTAGTTTGTATTTCTGTA

mRNA sequence

TGACACAAACCAAATCTTTCACTTCCTATTAATTCCTTAACATATTTTTTTTTCTCGAACTCTCCTCTTGCTGACAATTCCACCCACCTCATCTTCCTTTTATCCTTTCTTTTATATTATATTATCTTCTTCATCTTCTTCTTTCTTCTTCCTTTTTTTTCTCTTTCTATTATTGTGTGTCATTGTTCTACATTATTGTTATAACCTAACAACACCGGCCGACACCAAAGCAAAGATAATAGACATCATCATCAATTATCTGAAACTCGGGGGAAACGACCAAAAAGATTCAATTTTTAAGACACCCTTTATTAAATTTTCAGGTTTTTATTGATCTAGAGTTATGTGTGTGTTTTCTATGAGATGGGTTTTTGAGATTGAACGTAAAAGTTTTGATCTTTTTTAATGGTTTGTTTTTTTTTTATTTGTTTTTTTTTCATGTTTGTGGGGGTGTGGCAATGAGGTGTGAGGATAGAAGGTATCAGTTTTGAAATGAGGATACTTTGTGATTCTTGTGAAAGTGCTCCAGCTACTTTGTTTTGTGCTGCTGATGAGGCTGCTCTTTGTGCAATTTGTGATACAAAGGTACACATGTGCAATAAGCTTGCGAGCCGTCATGTAAGGGTTGGGCTTGCAAATCCAAGTGAAGTTCCTCGCTGTGATATTTGTGAAAATGCACCAGATGGTAGTTCCTTGTGTTTACAATGCGACGTGATCGTTCATGTTGGTGGTAAAAGAATGCACAAGAGATATCTCCGTCTGAGGCAGAGAGTTGAGTTTCCAGGGGATAAACAAAATGATGTGAAGGACCTAAATGTAAAACCGACGGAACAGGTTGAGAAAGTAAAAAGCCAAAATGAAGAGAGGGGTGAGAATGAAAAGCATGAAGAGTTGAGGGTGTCAGGTGTTACAAAAGATTATTCAAATGGAGATGGGCATTCCAAGCGGCCTAATAAAGTGATTGATTTAAACATGTAGTGCTTCAATAAATTTAGATGCTTAATTTTGATTTTTGGAATATTTCCAGCAATAAGGTGGGAAACATTTTTCAAACAGTTTTAAGTTTAGGAAACGAGGTTGAAATGCTGTGATAAATCTCTACCGTTCTAAATTTTTATTTTGGAACTGAACCTAAGGCAAAGGCAAAGGCAAAGCCAAAGTTCCACTGTATTGTTCTCTTTCTTTTCTACCCGCATCATGAGTGATCCTAAAAAGATTCAACTTGAATTAGTGCTTTTAACAAAAGCACCTGTATTTATAAAGTAGTTTGTATTTCTGTA

Coding sequence (CDS)

ATGAGGATACTTTGTGATTCTTGTGAAAGTGCTCCAGCTACTTTGTTTTGTGCTGCTGATGAGGCTGCTCTTTGTGCAATTTGTGATACAAAGGTACACATGTGCAATAAGCTTGCGAGCCGTCATGTAAGGGTTGGGCTTGCAAATCCAAGTGAAGTTCCTCGCTGTGATATTTGTGAAAATGCACCAGATGGTAGTTCCTTGTGTTTACAATGCGACGTGATCGTTCATGTTGGTGGTAAAAGAATGCACAAGAGATATCTCCGTCTGAGGCAGAGAGTTGAGTTTCCAGGGGATAAACAAAATGATGTGAAGGACCTAAATGTAAAACCGACGGAACAGGTTGAGAAAGTAAAAAGCCAAAATGAAGAGAGGGGTGAGAATGAAAAGCATGAAGAGTTGAGGGTGTCAGGTGTTACAAAAGATTATTCAAATGGAGATGGGCATTCCAAGCGGCCTAATAAAGTGATTGATTTAAACATGTAG

Protein sequence

MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICENAPDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTEQVEKVKSQNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLNM*
Homology
BLAST of CsGy6G031120 vs. ExPASy Swiss-Prot
Match: C0SVM5 (B-box zinc finger protein 19 OS=Arabidopsis thaliana OX=3702 GN=BBX19 PE=1 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.2e-41
Identity = 93/167 (55.69%), Postives = 107/167 (64.07%), Query Frame = 0

Query: 1   MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCD+CE+A A +FCAADEAALC  CD KVHMCNKLASRHVRVGLA PS  P CDICE
Sbjct: 1   MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPSNAPCCDICE 60

Query: 61  NAP-------DGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTE 120
           NAP       DGSSLCLQCD++VHVGGKR H R+L LRQR+EFPGD          KP E
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHGRFLLLRQRIEFPGD----------KPKE 120

Query: 121 QVEKVKSQNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLN 161
              +   QN+    N                NG+ + K  +++IDLN
Sbjct: 121 NNTRDNLQNQRVSTN---------------GNGEANGKIDDEMIDLN 142

BLAST of CsGy6G031120 vs. ExPASy Swiss-Prot
Match: Q9SJU5 (B-box zinc finger protein 18 OS=Arabidopsis thaliana OX=3702 GN=BBX18 PE=1 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 5.4e-41
Identity = 87/140 (62.14%), Postives = 102/140 (72.86%), Query Frame = 0

Query: 1   MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCD+CESA A +FCAADEAALC  CD KVH CNKLASRH+RVGLA+PS  P CDICE
Sbjct: 1   MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE 60

Query: 61  NAP-------DGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTE 120
           NAP       DGSSLCLQCD++VHVGGKR H+R+L LRQR+EFPGDK N    L ++   
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDKPNHADQLGLR--- 120

Query: 121 QVEKVKS-QNEERGENEKHE 133
             +K  S + +E   N  H+
Sbjct: 121 -CQKASSGRGQESNGNGDHD 136

BLAST of CsGy6G031120 vs. ExPASy Swiss-Prot
Match: Q96288 (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.2e-17
Identity = 47/98 (47.96%), Postives = 60/98 (61.22%), Query Frame = 0

Query: 1  MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPS-EVPRCDIC 60
          M+I CD CE APAT+ C ADEAALC  CD ++H  NKLAS+H R+ L + S + PRCDIC
Sbjct: 1  MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60

Query: 61 EN-------APDGSSLCLQCDVIVHVGGKRM--HKRYL 89
          +          D + LC  CD  +HV   R   H+R+L
Sbjct: 61 QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFL 98

BLAST of CsGy6G031120 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 5.5e-17
Identity = 55/133 (41.35%), Postives = 73/133 (54.89%), Query Frame = 0

Query: 1   MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGL-ANPSEVPRCDIC 60
           M+I C+ CE+A AT+ C ADEAALC  CD K+H  NKLA +H RV L A+ S +P+CDIC
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60

Query: 61  ENA-------PDGSSLCLQCDVIVHVGGKRM--HKRYLRLRQRVEF------PGDKQ--- 115
           + A        D + LC +CDV +H     +  H+R+L    +V        P  K    
Sbjct: 61  QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSPT 120

BLAST of CsGy6G031120 vs. ExPASy Swiss-Prot
Match: Q9SID1 (B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 3.0e-15
Identity = 57/135 (42.22%), Postives = 72/135 (53.33%), Query Frame = 0

Query: 1   MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPS-EVPRCDIC 60
           M+I CD CE APATL C ADEAALCA CD +VH  NKLAS+H R+ L + S + P CDIC
Sbjct: 1   MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60

Query: 61  -ENA------PDGSSLCLQCDVIVHVGGKRM--HKRYLRLRQRVEFPGDKQN-DVKDLNV 120
            E A       D + LC  CD   H    R   H+R+L    RV       N +V+  + 
Sbjct: 61  LEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQEVEKNHF 120

Query: 121 KPTEQVEKVKSQNEE 125
            P+ Q    K   ++
Sbjct: 121 DPSNQQSLSKPPTQQ 135

BLAST of CsGy6G031120 vs. NCBI nr
Match: XP_031743620.1 (B-box zinc finger protein 18 isoform X2 [Cucumis sativus])

HSP 1 Score: 324 bits (830), Expect = 1.08e-111
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0

Query: 1   MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE
Sbjct: 1   MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAPDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTEQVEKVKS 120
           NAPDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTEQVEKVKS
Sbjct: 61  NAPDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTEQVEKVKS 120

Query: 121 QNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLNM 161
           QNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLNM
Sbjct: 121 QNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLNM 161

BLAST of CsGy6G031120 vs. NCBI nr
Match: XP_004134879.1 (B-box zinc finger protein 18 isoform X1 [Cucumis sativus] >XP_031743619.1 B-box zinc finger protein 18 isoform X1 [Cucumis sativus] >KGN48894.1 hypothetical protein Csa_004422 [Cucumis sativus])

HSP 1 Score: 317 bits (812), Expect = 7.67e-109
Identity = 161/168 (95.83%), Postives = 161/168 (95.83%), Query Frame = 0

Query: 1   MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE
Sbjct: 1   MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAP-------DGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTE 120
           NAP       DGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTE
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTE 120

Query: 121 QVEKVKSQNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLNM 161
           QVEKVKSQNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLNM
Sbjct: 121 QVEKVKSQNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLNM 168

BLAST of CsGy6G031120 vs. NCBI nr
Match: XP_038882861.1 (B-box zinc finger protein 18-like isoform X2 [Benincasa hispida])

HSP 1 Score: 306 bits (783), Expect = 1.59e-104
Identity = 153/161 (95.03%), Postives = 155/161 (96.27%), Query Frame = 0

Query: 1   MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCDSCESA ATLFCAADEAALCA CDTKVHMCNKLASRHVRVGLANPSEVPRCDICE
Sbjct: 1   MRILCDSCESAAATLFCAADEAALCATCDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAPDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTEQVEKVKS 120
           NAPDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKP EQVEKV+S
Sbjct: 61  NAPDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPMEQVEKVRS 120

Query: 121 QNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLNM 161
           QNEERGE EKH+ELRVS V KDYSNGDGHSKRPNKVIDLNM
Sbjct: 121 QNEERGEIEKHQELRVSDVKKDYSNGDGHSKRPNKVIDLNM 161

BLAST of CsGy6G031120 vs. NCBI nr
Match: XP_008440796.1 (PREDICTED: B-box zinc finger protein 19-like isoform X2 [Cucumis melo])

HSP 1 Score: 304 bits (779), Expect = 6.48e-104
Identity = 152/161 (94.41%), Postives = 154/161 (95.65%), Query Frame = 0

Query: 1   MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCDSCESA ATLFCAADEAALCA+CDTKVHMCNKLASRHVRVGLANPSEVPRCDICE
Sbjct: 1   MRILCDSCESAAATLFCAADEAALCAVCDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAPDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTEQVEKVKS 120
           NAPDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDK+ND KD NVKP EQVEKVK 
Sbjct: 61  NAPDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKRNDGKDQNVKPMEQVEKVKG 120

Query: 121 QNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLNM 161
           QNEERGE EKHEELRVSGV KDYSNGDGHSKRPNKVIDLNM
Sbjct: 121 QNEERGEIEKHEELRVSGVEKDYSNGDGHSKRPNKVIDLNM 161

BLAST of CsGy6G031120 vs. NCBI nr
Match: XP_038882860.1 (B-box zinc finger protein 18-like isoform X1 [Benincasa hispida])

HSP 1 Score: 299 bits (765), Expect = 1.12e-101
Identity = 153/168 (91.07%), Postives = 155/168 (92.26%), Query Frame = 0

Query: 1   MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCDSCESA ATLFCAADEAALCA CDTKVHMCNKLASRHVRVGLANPSEVPRCDICE
Sbjct: 1   MRILCDSCESAAATLFCAADEAALCATCDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAP-------DGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTE 120
           NAP       DGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKP E
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPME 120

Query: 121 QVEKVKSQNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLNM 161
           QVEKV+SQNEERGE EKH+ELRVS V KDYSNGDGHSKRPNKVIDLNM
Sbjct: 121 QVEKVRSQNEERGEIEKHQELRVSDVKKDYSNGDGHSKRPNKVIDLNM 168

BLAST of CsGy6G031120 vs. ExPASy TrEMBL
Match: A0A0A0KJB1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505230 PE=4 SV=1)

HSP 1 Score: 317 bits (812), Expect = 3.71e-109
Identity = 161/168 (95.83%), Postives = 161/168 (95.83%), Query Frame = 0

Query: 1   MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE
Sbjct: 1   MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAP-------DGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTE 120
           NAP       DGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTE
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTE 120

Query: 121 QVEKVKSQNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLNM 161
           QVEKVKSQNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLNM
Sbjct: 121 QVEKVKSQNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLNM 168

BLAST of CsGy6G031120 vs. ExPASy TrEMBL
Match: A0A1S3B2Q2 (B-box zinc finger protein 19-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485108 PE=4 SV=1)

HSP 1 Score: 304 bits (779), Expect = 3.14e-104
Identity = 152/161 (94.41%), Postives = 154/161 (95.65%), Query Frame = 0

Query: 1   MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCDSCESA ATLFCAADEAALCA+CDTKVHMCNKLASRHVRVGLANPSEVPRCDICE
Sbjct: 1   MRILCDSCESAAATLFCAADEAALCAVCDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAPDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTEQVEKVKS 120
           NAPDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDK+ND KD NVKP EQVEKVK 
Sbjct: 61  NAPDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKRNDGKDQNVKPMEQVEKVKG 120

Query: 121 QNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLNM 161
           QNEERGE EKHEELRVSGV KDYSNGDGHSKRPNKVIDLNM
Sbjct: 121 QNEERGEIEKHEELRVSGVEKDYSNGDGHSKRPNKVIDLNM 161

BLAST of CsGy6G031120 vs. ExPASy TrEMBL
Match: A0A5A7SKM7 (B-box zinc finger protein 19-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001490 PE=4 SV=1)

HSP 1 Score: 297 bits (761), Expect = 2.22e-101
Identity = 152/168 (90.48%), Postives = 154/168 (91.67%), Query Frame = 0

Query: 1   MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCDSCESA ATLFCAADEAALCA+CDTKVHMCNKLASRHVRVGLANPSEVPRCDICE
Sbjct: 1   MRILCDSCESAAATLFCAADEAALCAVCDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAP-------DGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTE 120
           NAP       DGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDK+ND KD NVKP E
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKRNDGKDQNVKPME 120

Query: 121 QVEKVKSQNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLNM 161
           QVEKVK QNEERGE EKHEELRVSGV KDYSNGDGHSKRPNKVIDLNM
Sbjct: 121 QVEKVKGQNEERGEIEKHEELRVSGVEKDYSNGDGHSKRPNKVIDLNM 168

BLAST of CsGy6G031120 vs. ExPASy TrEMBL
Match: A0A1S3B2K6 (B-box zinc finger protein 19-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485108 PE=4 SV=1)

HSP 1 Score: 297 bits (761), Expect = 2.22e-101
Identity = 152/168 (90.48%), Postives = 154/168 (91.67%), Query Frame = 0

Query: 1   MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCDSCESA ATLFCAADEAALCA+CDTKVHMCNKLASRHVRVGLANPSEVPRCDICE
Sbjct: 1   MRILCDSCESAAATLFCAADEAALCAVCDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAP-------DGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTE 120
           NAP       DGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDK+ND KD NVKP E
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKRNDGKDQNVKPME 120

Query: 121 QVEKVKSQNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLNM 161
           QVEKVK QNEERGE EKHEELRVSGV KDYSNGDGHSKRPNKVIDLNM
Sbjct: 121 QVEKVKGQNEERGEIEKHEELRVSGVEKDYSNGDGHSKRPNKVIDLNM 168

BLAST of CsGy6G031120 vs. ExPASy TrEMBL
Match: A0A6J1IRU8 (B-box zinc finger protein 18-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478764 PE=4 SV=1)

HSP 1 Score: 269 bits (687), Expect = 3.44e-90
Identity = 141/163 (86.50%), Postives = 145/163 (88.96%), Query Frame = 0

Query: 1   MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCDSCE+A ATLFCAADEAALC  CD KVHMCNKLASRHVRVGLANPSEVPRCDICE
Sbjct: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAPDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTEQVEKVKS 120
           NAPDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGD QNDVK  N KP EQVE V+ 
Sbjct: 61  NAPDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPMEQVETVRG 120

Query: 121 QNEERGE-NEKHEE-LRVSGVTKDYSNGDGHSKRPNKVIDLNM 161
           QN+ERGE NEK EE LR SGV K YSNGD HSKRPNKVIDLN+
Sbjct: 121 QNQERGEENEKQEEDLRFSGV-KGYSNGDRHSKRPNKVIDLNI 162

BLAST of CsGy6G031120 vs. TAIR 10
Match: AT4G38960.1 (B-box type zinc finger family protein )

HSP 1 Score: 169.5 bits (428), Expect = 2.3e-42
Identity = 93/167 (55.69%), Postives = 107/167 (64.07%), Query Frame = 0

Query: 1   MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCD+CE+A A +FCAADEAALC  CD KVHMCNKLASRHVRVGLA PS  P CDICE
Sbjct: 1   MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPSNAPCCDICE 60

Query: 61  NAP-------DGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTE 120
           NAP       DGSSLCLQCD++VHVGGKR H R+L LRQR+EFPGD          KP E
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHGRFLLLRQRIEFPGD----------KPKE 120

Query: 121 QVEKVKSQNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLN 161
              +   QN+    N                NG+ + K  +++IDLN
Sbjct: 121 NNTRDNLQNQRVSTN---------------GNGEANGKIDDEMIDLN 142

BLAST of CsGy6G031120 vs. TAIR 10
Match: AT2G21320.1 (B-box zinc finger family protein )

HSP 1 Score: 168.7 bits (426), Expect = 3.9e-42
Identity = 87/140 (62.14%), Postives = 102/140 (72.86%), Query Frame = 0

Query: 1   MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCD+CESA A +FCAADEAALC  CD KVH CNKLASRH+RVGLA+PS  P CDICE
Sbjct: 1   MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE 60

Query: 61  NAP-------DGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTE 120
           NAP       DGSSLCLQCD++VHVGGKR H+R+L LRQR+EFPGDK N    L ++   
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDKPNHADQLGLR--- 120

Query: 121 QVEKVKS-QNEERGENEKHE 133
             +K  S + +E   N  H+
Sbjct: 121 -CQKASSGRGQESNGNGDHD 136

BLAST of CsGy6G031120 vs. TAIR 10
Match: AT4G38960.3 (B-box type zinc finger family protein )

HSP 1 Score: 148.7 bits (374), Expect = 4.1e-36
Identity = 93/210 (44.29%), Postives = 107/210 (50.95%), Query Frame = 0

Query: 1   MRILCDSCESAPATLFCAADEAALCAICDTK----------------------------- 60
           MRILCD+CE+A A +FCAADEAALC  CD K                             
Sbjct: 1   MRILCDACENAAAIIFCAADEAALCRPCDEKALHMRLDISKCSESVKRVQIVETSSLIWW 60

Query: 61  --------------VHMCNKLASRHVRVGLANPSEVPRCDICENAP-------DGSSLCL 120
                         VHMCNKLASRHVRVGLA PS  P CDICENAP       DGSSLCL
Sbjct: 61  IKMGTFCLQSLHLVVHMCNKLASRHVRVGLAEPSNAPCCDICENAPAFFYCEIDGSSLCL 120

Query: 121 QCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTEQVEKVKSQNEERGENEK 161
           QCD++VHVGGKR H R+L LRQR+EFPGD          KP E   +   QN+    N  
Sbjct: 121 QCDMVVHVGGKRTHGRFLLLRQRIEFPGD----------KPKENNTRDNLQNQRVSTN-- 180

BLAST of CsGy6G031120 vs. TAIR 10
Match: AT4G38960.2 (B-box type zinc finger family protein )

HSP 1 Score: 119.0 bits (297), Expect = 3.5e-27
Identity = 68/134 (50.75%), Postives = 79/134 (58.96%), Query Frame = 0

Query: 34  MCNKLASRHVRVGLANPSEVPRCDICENAP-------DGSSLCLQCDVIVHVGGKRMHKR 93
           MCNKLASRHVRVGLA PS  P CDICENAP       DGSSLCLQCD++VHVGGKR H R
Sbjct: 1   MCNKLASRHVRVGLAEPSNAPCCDICENAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHGR 60

Query: 94  YLRLRQRVEFPGDKQNDVKDLNVKPTEQVEKVKSQNEERGENEKHEELRVSGVTKDYSNG 153
           +L LRQR+EFPGD          KP E   +   QN+    N                NG
Sbjct: 61  FLLLRQRIEFPGD----------KPKENNTRDNLQNQRVSTN---------------GNG 109

Query: 154 DGHSKRPNKVIDLN 161
           + + K  +++IDLN
Sbjct: 121 EANGKIDDEMIDLN 109

BLAST of CsGy6G031120 vs. TAIR 10
Match: AT1G06040.2 (B-box zinc finger family protein )

HSP 1 Score: 89.7 bits (221), Expect = 2.3e-18
Identity = 47/98 (47.96%), Postives = 60/98 (61.22%), Query Frame = 0

Query: 1  MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPS-EVPRCDIC 60
          M+I CD CE APAT+ C ADEAALC  CD ++H  NKLAS+H R+ L + S + PRCDIC
Sbjct: 1  MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60

Query: 61 EN-------APDGSSLCLQCDVIVHVGGKRM--HKRYL 89
          +          D + LC  CD  +HV   R   H+R+L
Sbjct: 61 QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFL 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
C0SVM53.2e-4155.69B-box zinc finger protein 19 OS=Arabidopsis thaliana OX=3702 GN=BBX19 PE=1 SV=1[more]
Q9SJU55.4e-4162.14B-box zinc finger protein 18 OS=Arabidopsis thaliana OX=3702 GN=BBX18 PE=1 SV=2[more]
Q962883.2e-1747.96B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1[more]
Q9SYM25.5e-1741.35B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2[more]
Q9SID13.0e-1542.22B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
XP_031743620.11.08e-111100.00B-box zinc finger protein 18 isoform X2 [Cucumis sativus][more]
XP_004134879.17.67e-10995.83B-box zinc finger protein 18 isoform X1 [Cucumis sativus] >XP_031743619.1 B-box ... [more]
XP_038882861.11.59e-10495.03B-box zinc finger protein 18-like isoform X2 [Benincasa hispida][more]
XP_008440796.16.48e-10494.41PREDICTED: B-box zinc finger protein 19-like isoform X2 [Cucumis melo][more]
XP_038882860.11.12e-10191.07B-box zinc finger protein 18-like isoform X1 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A0A0KJB13.71e-10995.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505230 PE=4 SV=1[more]
A0A1S3B2Q23.14e-10494.41B-box zinc finger protein 19-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10348... [more]
A0A5A7SKM72.22e-10190.48B-box zinc finger protein 19-like isoform X1 OS=Cucumis melo var. makuwa OX=1194... [more]
A0A1S3B2K62.22e-10190.48B-box zinc finger protein 19-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348... [more]
A0A6J1IRU83.44e-9086.50B-box zinc finger protein 18-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
Match NameE-valueIdentityDescription
AT4G38960.12.3e-4255.69B-box type zinc finger family protein [more]
AT2G21320.13.9e-4262.14B-box zinc finger family protein [more]
AT4G38960.34.1e-3644.29B-box type zinc finger family protein [more]
AT4G38960.23.5e-2750.75B-box type zinc finger family protein [more]
AT1G06040.22.3e-1847.96B-box zinc finger family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000315B-box-type zinc fingerSMARTSM00336bboxneu5coord: 4..47
e-value: 4.1E-8
score: 42.9
coord: 51..89
e-value: 1.2
score: 6.6
IPR000315B-box-type zinc fingerPFAMPF00643zf-B_boxcoord: 4..41
e-value: 9.2E-7
score: 28.9
IPR000315B-box-type zinc fingerPROSITEPS50119ZF_BBOXcoord: 1..47
score: 10.580057
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..138
NoneNo IPR availablePANTHERPTHR31832B-BOX ZINC FINGER PROTEIN 22coord: 1..161
NoneNo IPR availablePANTHERPTHR31832:SF5B-BOX ZINC FINGER PROTEIN 19coord: 1..161
NoneNo IPR availableCDDcd19821Bbox1_BBX-likecoord: 4..47
e-value: 5.57597E-18
score: 70.7895

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G031120.2CsGy6G031120.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009640 photomorphogenesis
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0008270 zinc ion binding