CsGy6G031120 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGACACAAACCAAATCTTTCACTTCCTATTAATTCCTTAACATATTTTTTTTTCTCGAACTCTCCTCTTGCTGACAATTCCACCCACCTCATCTTCCTTTTATCCTTTCTTTTATATTATATTATCTTCTTCATCTTCTTCTTTCTTCTTCCTTTTTTTTCTCTTTCTATTATTGTGTGTCATTGTTCTACATTATTGTTATAACCTAACAACACCGGCCGACACCAAAGCAAAGATAATAGACATCATCATCAATTATCTGAAACTCGGGGGAAACGACCAAAAAGATTCAATTTTTAAGACACCCTTTATTAAATTTTCAGGTTTTTATTGATCTAGAGTTATGTGTGTGTTTTCTATGAGATGGGTTTTTGAGATTGAACGTAAAAGTTTTGATCTTTTTTAATGGTTTGTTTTTTTTTTATTTGTTTTTTTTTCATGTTTGTGGGGGTGTGGCAATGAGGTGTGAGGATAGAAGGTATCAGTTTTGAAATGAGGATACTTTGTGATTCTTGTGAAAGTGCTCCAGCTACTTTGTTTTGTGCTGCTGATGAGGCTGCTCTTTGTGCAATTTGTGATACAAAGGTTTTATGATCATAATTATTATGTTATCAAAAGCAACCAGTGTGTTTCTTTGTTTATTTTCATGATTTTATCGAAGTGTGTGTTTTCTTTTTTCTTTTGTTGATTTTTTGGATTGTTTTTATATGTATTTGGGAAAGGTACACATGTGCAATAAGCTTGCGAGCCGTCATGTAAGGGTTGGGCTTGCAAATCCAAGTGAAGTTCCTCGCTGTGATATTTGTGAAAATGCACCAGGTATAATTATATATATTGTTTTTTTTTTCCCTTTTTTTGTGTGAGGGTTTGGATGGTTTAACAATTATTCTTTGTGAAATTAATAATGTAATTTGCAGCTTTCTTTTACTGTGAGATAGATGGTAGTTCCTTGTGTTTACAATGCGACGTGATCGTTCATGTTGGTGGTAAAAGAATGCACAAGAGATATCTCCGTCTGAGGCAGAGAGTTGAGGTCTGTGATTTTTAATATCAAATCCTATAATGCAATGTTTTTTTTCTCATCACTTCATACAATATGCCTCCATATTTTGGATTAGTTGACCAATGTTGATAGAAAAAAGAAAAGAAAGAAAGTATATATTGAAGAATGATCAAAGGATATAGAATACTATAGTAATGGAAATATCTACCAATCTTGGTTAATGTTTCTGTTTAGCATGCATTCATACAGAATAATGTAAAGAGGACTAAGGTTTTGTTTGGTAATGAATCTTGCAGTTTCCAGGGGATAAACAAAATGATGTGAAGGACCTAAATGTAAAACCGACGGAACAGGTTGAGAAAGTAAAAAGCCAAAATGAAGAGAGGGGTGAGAATGAAAAGCATGAAGAGTTGAGGGTGTCAGGTGTTACAAAAGATTATTCAAATGGAGATGGGCATTCCAAGCGGCCTAATAAAGTGATTGATTTAAACATGTAGTGCTTCAATAAATTTAGATGCTTAATTTTGATTTTTGGAATATTTCCAGCAATAAGGTGGGAAACATTTTTCAAACAGTTTTAAGTTTAGGAAACGAGGTTGAAATGCTGTGATAAATCTCTACCGTTCTAAATTTTTATTTTGGAACTGAACCTAAGGCAAAGGCAAAGGCAAAGCCAAAGTTCCACTGTATTGTTCTCTTTCTTTTCTACCCGCATCATGAGTGATCCTAAAAAGATTCAACTTGAATTAGTGCTTTTAACAAAAGCACCTGTATTTATAAAGTAGTTTGTATTTCTGTA TGACACAAACCAAATCTTTCACTTCCTATTAATTCCTTAACATATTTTTTTTTCTCGAACTCTCCTCTTGCTGACAATTCCACCCACCTCATCTTCCTTTTATCCTTTCTTTTATATTATATTATCTTCTTCATCTTCTTCTTTCTTCTTCCTTTTTTTTCTCTTTCTATTATTGTGTGTCATTGTTCTACATTATTGTTATAACCTAACAACACCGGCCGACACCAAAGCAAAGATAATAGACATCATCATCAATTATCTGAAACTCGGGGGAAACGACCAAAAAGATTCAATTTTTAAGACACCCTTTATTAAATTTTCAGGTTTTTATTGATCTAGAGTTATGTGTGTGTTTTCTATGAGATGGGTTTTTGAGATTGAACGTAAAAGTTTTGATCTTTTTTAATGGTTTGTTTTTTTTTTATTTGTTTTTTTTTCATGTTTGTGGGGGTGTGGCAATGAGGTGTGAGGATAGAAGGTATCAGTTTTGAAATGAGGATACTTTGTGATTCTTGTGAAAGTGCTCCAGCTACTTTGTTTTGTGCTGCTGATGAGGCTGCTCTTTGTGCAATTTGTGATACAAAGGTACACATGTGCAATAAGCTTGCGAGCCGTCATGTAAGGGTTGGGCTTGCAAATCCAAGTGAAGTTCCTCGCTGTGATATTTGTGAAAATGCACCAGATGGTAGTTCCTTGTGTTTACAATGCGACGTGATCGTTCATGTTGGTGGTAAAAGAATGCACAAGAGATATCTCCGTCTGAGGCAGAGAGTTGAGTTTCCAGGGGATAAACAAAATGATGTGAAGGACCTAAATGTAAAACCGACGGAACAGGTTGAGAAAGTAAAAAGCCAAAATGAAGAGAGGGGTGAGAATGAAAAGCATGAAGAGTTGAGGGTGTCAGGTGTTACAAAAGATTATTCAAATGGAGATGGGCATTCCAAGCGGCCTAATAAAGTGATTGATTTAAACATGTAGTGCTTCAATAAATTTAGATGCTTAATTTTGATTTTTGGAATATTTCCAGCAATAAGGTGGGAAACATTTTTCAAACAGTTTTAAGTTTAGGAAACGAGGTTGAAATGCTGTGATAAATCTCTACCGTTCTAAATTTTTATTTTGGAACTGAACCTAAGGCAAAGGCAAAGGCAAAGCCAAAGTTCCACTGTATTGTTCTCTTTCTTTTCTACCCGCATCATGAGTGATCCTAAAAAGATTCAACTTGAATTAGTGCTTTTAACAAAAGCACCTGTATTTATAAAGTAGTTTGTATTTCTGTA ATGAGGATACTTTGTGATTCTTGTGAAAGTGCTCCAGCTACTTTGTTTTGTGCTGCTGATGAGGCTGCTCTTTGTGCAATTTGTGATACAAAGGTACACATGTGCAATAAGCTTGCGAGCCGTCATGTAAGGGTTGGGCTTGCAAATCCAAGTGAAGTTCCTCGCTGTGATATTTGTGAAAATGCACCAGATGGTAGTTCCTTGTGTTTACAATGCGACGTGATCGTTCATGTTGGTGGTAAAAGAATGCACAAGAGATATCTCCGTCTGAGGCAGAGAGTTGAGTTTCCAGGGGATAAACAAAATGATGTGAAGGACCTAAATGTAAAACCGACGGAACAGGTTGAGAAAGTAAAAAGCCAAAATGAAGAGAGGGGTGAGAATGAAAAGCATGAAGAGTTGAGGGTGTCAGGTGTTACAAAAGATTATTCAAATGGAGATGGGCATTCCAAGCGGCCTAATAAAGTGATTGATTTAAACATGTAG MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICENAPDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTEQVEKVKSQNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLNM* Homology
BLAST of CsGy6G031120 vs. ExPASy Swiss-Prot
Match: C0SVM5 (B-box zinc finger protein 19 OS=Arabidopsis thaliana OX=3702 GN=BBX19 PE=1 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 3.2e-41 Identity = 93/167 (55.69%), Postives = 107/167 (64.07%), Query Frame = 0
BLAST of CsGy6G031120 vs. ExPASy Swiss-Prot
Match: Q9SJU5 (B-box zinc finger protein 18 OS=Arabidopsis thaliana OX=3702 GN=BBX18 PE=1 SV=2) HSP 1 Score: 168.7 bits (426), Expect = 5.4e-41 Identity = 87/140 (62.14%), Postives = 102/140 (72.86%), Query Frame = 0
BLAST of CsGy6G031120 vs. ExPASy Swiss-Prot
Match: Q96288 (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 3.2e-17 Identity = 47/98 (47.96%), Postives = 60/98 (61.22%), Query Frame = 0
BLAST of CsGy6G031120 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2) HSP 1 Score: 89.0 bits (219), Expect = 5.5e-17 Identity = 55/133 (41.35%), Postives = 73/133 (54.89%), Query Frame = 0
BLAST of CsGy6G031120 vs. ExPASy Swiss-Prot
Match: Q9SID1 (B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2) HSP 1 Score: 83.2 bits (204), Expect = 3.0e-15 Identity = 57/135 (42.22%), Postives = 72/135 (53.33%), Query Frame = 0
BLAST of CsGy6G031120 vs. NCBI nr
Match: XP_031743620.1 (B-box zinc finger protein 18 isoform X2 [Cucumis sativus]) HSP 1 Score: 324 bits (830), Expect = 1.08e-111 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of CsGy6G031120 vs. NCBI nr
Match: XP_004134879.1 (B-box zinc finger protein 18 isoform X1 [Cucumis sativus] >XP_031743619.1 B-box zinc finger protein 18 isoform X1 [Cucumis sativus] >KGN48894.1 hypothetical protein Csa_004422 [Cucumis sativus]) HSP 1 Score: 317 bits (812), Expect = 7.67e-109 Identity = 161/168 (95.83%), Postives = 161/168 (95.83%), Query Frame = 0
BLAST of CsGy6G031120 vs. NCBI nr
Match: XP_038882861.1 (B-box zinc finger protein 18-like isoform X2 [Benincasa hispida]) HSP 1 Score: 306 bits (783), Expect = 1.59e-104 Identity = 153/161 (95.03%), Postives = 155/161 (96.27%), Query Frame = 0
BLAST of CsGy6G031120 vs. NCBI nr
Match: XP_008440796.1 (PREDICTED: B-box zinc finger protein 19-like isoform X2 [Cucumis melo]) HSP 1 Score: 304 bits (779), Expect = 6.48e-104 Identity = 152/161 (94.41%), Postives = 154/161 (95.65%), Query Frame = 0
BLAST of CsGy6G031120 vs. NCBI nr
Match: XP_038882860.1 (B-box zinc finger protein 18-like isoform X1 [Benincasa hispida]) HSP 1 Score: 299 bits (765), Expect = 1.12e-101 Identity = 153/168 (91.07%), Postives = 155/168 (92.26%), Query Frame = 0
BLAST of CsGy6G031120 vs. ExPASy TrEMBL
Match: A0A0A0KJB1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505230 PE=4 SV=1) HSP 1 Score: 317 bits (812), Expect = 3.71e-109 Identity = 161/168 (95.83%), Postives = 161/168 (95.83%), Query Frame = 0
BLAST of CsGy6G031120 vs. ExPASy TrEMBL
Match: A0A1S3B2Q2 (B-box zinc finger protein 19-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485108 PE=4 SV=1) HSP 1 Score: 304 bits (779), Expect = 3.14e-104 Identity = 152/161 (94.41%), Postives = 154/161 (95.65%), Query Frame = 0
BLAST of CsGy6G031120 vs. ExPASy TrEMBL
Match: A0A5A7SKM7 (B-box zinc finger protein 19-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001490 PE=4 SV=1) HSP 1 Score: 297 bits (761), Expect = 2.22e-101 Identity = 152/168 (90.48%), Postives = 154/168 (91.67%), Query Frame = 0
BLAST of CsGy6G031120 vs. ExPASy TrEMBL
Match: A0A1S3B2K6 (B-box zinc finger protein 19-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485108 PE=4 SV=1) HSP 1 Score: 297 bits (761), Expect = 2.22e-101 Identity = 152/168 (90.48%), Postives = 154/168 (91.67%), Query Frame = 0
BLAST of CsGy6G031120 vs. ExPASy TrEMBL
Match: A0A6J1IRU8 (B-box zinc finger protein 18-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478764 PE=4 SV=1) HSP 1 Score: 269 bits (687), Expect = 3.44e-90 Identity = 141/163 (86.50%), Postives = 145/163 (88.96%), Query Frame = 0
BLAST of CsGy6G031120 vs. TAIR 10
Match: AT4G38960.1 (B-box type zinc finger family protein ) HSP 1 Score: 169.5 bits (428), Expect = 2.3e-42 Identity = 93/167 (55.69%), Postives = 107/167 (64.07%), Query Frame = 0
BLAST of CsGy6G031120 vs. TAIR 10
Match: AT2G21320.1 (B-box zinc finger family protein ) HSP 1 Score: 168.7 bits (426), Expect = 3.9e-42 Identity = 87/140 (62.14%), Postives = 102/140 (72.86%), Query Frame = 0
BLAST of CsGy6G031120 vs. TAIR 10
Match: AT4G38960.3 (B-box type zinc finger family protein ) HSP 1 Score: 148.7 bits (374), Expect = 4.1e-36 Identity = 93/210 (44.29%), Postives = 107/210 (50.95%), Query Frame = 0
BLAST of CsGy6G031120 vs. TAIR 10
Match: AT4G38960.2 (B-box type zinc finger family protein ) HSP 1 Score: 119.0 bits (297), Expect = 3.5e-27 Identity = 68/134 (50.75%), Postives = 79/134 (58.96%), Query Frame = 0
BLAST of CsGy6G031120 vs. TAIR 10
Match: AT1G06040.2 (B-box zinc finger family protein ) HSP 1 Score: 89.7 bits (221), Expect = 2.3e-18 Identity = 47/98 (47.96%), Postives = 60/98 (61.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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