CsGy6G029540 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G029540
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	40S ribosomal protein S6
Location	Gy14Chr6: 28137320 .. 28139352 (+)
RNA-Seq Expression	CsGy6G029540
Synteny	CsGy6G029540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGTTCGGGCTCGTTTCGAATCCAGACCTCAGGGAGTCTCGTCAATGGCTCAAGCCCACACACTCATCGAATATCGTAAACCAATTCACAAAAGGCCGCACTGTTTTGTGGAAAAAAGAACAACGTTCTCAATTCTTTCTCATCACGCATCGGCTAAAATGTAATATACCCTCAAAGTCAAAGCACAATATCCCTAATTCGTTGCCAAGATGAAGGTTTGTATGAATCTCCATTCTTCTCGTACTGAGCTATTGCACTGTCCAATTTTTTTTTATGTAGAATTTGACACGTTTTCTACTCCTTCCCTTTCAGTTCAACATTGCTACTCCCACTACTGGGTGCCAGAAAAAGCTCCAAATCGATGACGATGCTAAACTGTAAGGAATTTTCTTTGTATATCGTACTGTTACCATCTCATTCTTCTTTCATTCTGTTGGTGGAAGTATCGGTTTTAGGGGTCCAACAATATGAAACTTGGGATGCTTATAGCACAAAGTTTTTTCTTACTGATTTTAACAATGTGTTTTTTGCTCGAAGGATTAGGAAGCAATGAACATGCTGCTTATTTTTATTTATTTAATTTCTTTATATTGTTCAGTAATTGTTTCATTAGTATGTATGATATTTCGTTTGGGGAACTTATAATTATCTGTGGAGTTGGCCTGCAAACTGGAAGCCTTTTCTTTTGCATTTCGTTACGACGTTAGTCTTTTTGTTCACACATTATCACAGATCCCCATTCTCGCTTAAATTTCCGTCTTTAGAAATGGAAGTTTCTTCTATTATTCCAAAATCATGGATATTATAGGAGATTTGATTACTTTTCTCACAAAACAAATTATCTGAAATCTAAACATAGCTGGATTCTGGTATCTGGTTTCGTGGGATTATTTGACTCTCTTAGTATCAAGTTTTTCATGTAGTGTTAGCTGTGACGAATTTGACTTGACTTGTCATATTGGGACAAGTGGGTCTCTCATTTGGAATATCCTTACAGTTCATTAGAATTTGTAGTCACACTTTAATATTCTTAATGCAGCCGACCATTTTGGGACAAGAGGATCTCCCAAGAAGTTAATGGAGATGCGCTTGGTGAAGTAAGTTTTCTGTTGGTATCTTTTTCATTACATTATAATCAAGTATTTTTCATTTCATCTGTCATGTTATTAACTTAGATGATTTTTGGCAGGAGTTTAAAAAGGTTATATTTTAAAAATAATGGGGGGTTTGTGACAAGCAAGTTTTTCCAATGAAACAAGGTGTCTTGACCACTGGCCATGTTCGCCTTTTGCTGCACAGAGGTATAATTTTTTTTTTTAATCTTACTGGTTCTGGCTGTAGTTTCAATAGAGCGGAGTGACTTACTTCTATATATGGAAAGCGAAGTATAAGTTTCGAGTCCTTGAACAGGTACTCCTTGTTTTCGTGGTTATGGTAGGAGGAAAGGTAAGAGAAGGAGGAAATCTGTCCGAGGTTGCATTGTTAATCCAGACCTCTCTGTTTTGAATTTGGTGACTGTGAAGAAGGGCGAGAATGACCTACCTGGCCTAACAGGTATTGAGAAGCCAAGAATGCGAGGTCCGAAAAGGGCATCTAAAATCCGGAAACTCTTCAATCTCTCCAAGGATGATGATGTTCGAAAGTATGTCAACACATACCGCAGAACCTTCACAAATAAACTTGGCGGGTTTGCTTACCAGTGTTCTGATACATAGTTGGTAACAGGGAATCAAGTAGAAACAATGTGATTGGTTATACTTGAGCTCAAATACATTGTTATCTGGTTGGCTGCTAAGAAATGTAGTAAAGCCCCCAAAATCCAGAGGCTGGTAACCCCCTTGGCTCTGCAAGATAAGCGAGGATGGATTTCTGAAAAGAAAAAGAGAATTGCCCAAGCCAAGTCAGAAGCAGCCGAGTGTCAGAAGCTTTTGGCATCACGTGTGAAAGAACAACGCGAGCGCCGCAGTGAGAGCTTAGCAAAGAGAAGATCCACGCTCTCTGCTGCCTCCAAGCCTTCTAGTGCTGCTTAG

mRNA sequence

ATGTGGTTCGGGCTCGTTTCGAATCCAGACCTCAGGGAGTCTCGTCAATGGCTCAAGCCCACACACTCATCGAATATCTTCAACATTGCTACTCCCACTACTGGGTGCCAGAAAAAGCTCCAAATCGATGACGATGCTAAACTGAGATTTGATTACTTTTCTCACAAAACAAATTATCTGAAATCTAAACATAGCTGGATTCTGTCACACTTTAATATTCTTAATGCAGCCGACCATTTTGGGACAAGAGGATCTCCCAAGAAGTTAATGGAGATGCGCTTGGTGAAGAGTTTAAAAAGAGGTACTCCTTGTTTTCGTGGTTATGGTAGGAGGAAAGGTAAGAGAAGGAGGAAATCTGTCCGAGGTTGCATTGTTAATCCAGACCTCTCTGTTTTGAATTTGGTGACTGTGAAGAAGGGCGAGAATGACCTACCTGGCCTAACAGGTATTGAGAAGCCAAGAATGCGAGGTCCGAAAAGGGCATCTAAAATCCGGAAACTCTTCAATCTCTCCAAGGATGATGATGTTCGAAAGTATGTCAACACATACCGCAGAACCTTCACAAATAAACTTGGCGGTAAAGCCCCCAAAATCCAGAGGCTGGTAACCCCCTTGGCTCTGCAAGATAAGCGAGGATGGATTTCTGAAAAGAAAAAGAGAATTGCCCAAGCCAAGTCAGAAGCAGCCGAGTGTCAGAAGCTTTTGGCATCACGTGTGAAAGAACAACGCGAGCGCCGCAGTGAGAGCTTAGCAAAGAGAAGATCCACGCTCTCTGCTGCCTCCAAGCCTTCTAGTGCTGCTTAG

Coding sequence (CDS)

ATGTGGTTCGGGCTCGTTTCGAATCCAGACCTCAGGGAGTCTCGTCAATGGCTCAAGCCCACACACTCATCGAATATCTTCAACATTGCTACTCCCACTACTGGGTGCCAGAAAAAGCTCCAAATCGATGACGATGCTAAACTGAGATTTGATTACTTTTCTCACAAAACAAATTATCTGAAATCTAAACATAGCTGGATTCTGTCACACTTTAATATTCTTAATGCAGCCGACCATTTTGGGACAAGAGGATCTCCCAAGAAGTTAATGGAGATGCGCTTGGTGAAGAGTTTAAAAAGAGGTACTCCTTGTTTTCGTGGTTATGGTAGGAGGAAAGGTAAGAGAAGGAGGAAATCTGTCCGAGGTTGCATTGTTAATCCAGACCTCTCTGTTTTGAATTTGGTGACTGTGAAGAAGGGCGAGAATGACCTACCTGGCCTAACAGGTATTGAGAAGCCAAGAATGCGAGGTCCGAAAAGGGCATCTAAAATCCGGAAACTCTTCAATCTCTCCAAGGATGATGATGTTCGAAAGTATGTCAACACATACCGCAGAACCTTCACAAATAAACTTGGCGGTAAAGCCCCCAAAATCCAGAGGCTGGTAACCCCCTTGGCTCTGCAAGATAAGCGAGGATGGATTTCTGAAAAGAAAAAGAGAATTGCCCAAGCCAAGTCAGAAGCAGCCGAGTGTCAGAAGCTTTTGGCATCACGTGTGAAAGAACAACGCGAGCGCCGCAGTGAGAGCTTAGCAAAGAGAAGATCCACGCTCTCTGCTGCCTCCAAGCCTTCTAGTGCTGCTTAG

Protein sequence

MWFGLVSNPDLRESRQWLKPTHSSNIFNIATPTTGCQKKLQIDDDAKLRFDYFSHKTNYLKSKHSWILSHFNILNAADHFGTRGSPKKLMEMRLVKSLKRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLGGKAPKIQRLVTPLALQDKRGWISEKKKRIAQAKSEAAECQKLLASRVKEQRERRSESLAKRRSTLSAASKPSSAA*

Homology

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BLAST of CsGy6G029540 vs. ExPASy Swiss-Prot
Match: Q9M3V8 (40S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 8.3e-79
Identity = 169/246 (68.70%), Postives = 189/246 (76.83%), Query Frame = 0


Query: 27  FNIATPTTGCQKKLQIDDDAKLRFDY---FSHKTNYLKSKHSWILSHFNILNAADHFGTR 86
           FNIA PTTGCQKKL+IDDD KLR  Y    S + +       +    F I+   D  G  
Sbjct: 3   FNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFP 62

Query: 87  GSPKKLMEMRLVKSLKRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 146
                L   R+   L RGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKGEND
Sbjct: 63  MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 122

Query: 147 LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG---GKAPKIQR 206
           LPGLT +EKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYRRTFTNK G    KAPKIQR
Sbjct: 123 LPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKGKTCSKAPKIQR 182

Query: 207 LVTPLALQDKRGWISEKKKRIAQAKSEAAECQKLLASRVKEQRERRSESLAKRRSTLSAA 266
           LVTPL LQ KR  I+EKKKR+A+AKSEAAE QKLLASR+KEQR+RRSESLAK+RS LSAA
Sbjct: 183 LVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKEQRDRRSESLAKKRSRLSAA 242

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BLAST of CsGy6G029540 vs. ExPASy Swiss-Prot
Match: O48549 (40S ribosomal protein S6-1 OS=Arabidopsis thaliana OX=3702 GN=RPS6A PE=1 SV=2)

HSP 1 Score: 278.5 bits (711), Expect = 8.0e-74
Identity = 164/248 (66.13%), Postives = 184/248 (74.19%), Query Frame = 0


Query: 27  FNIATPTTGCQKKLQIDDDAKLRFDY---FSHKTNYLKSKHSWILSHFNILNAADHFGTR 86
           FN+A PTTGCQKKL+IDDD KLR  Y    S + +       +    F I    D  G  
Sbjct: 3   FNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQGFP 62

Query: 87  GSPKKLMEMRLVKSLKRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 146
                L   R+   L RGTPCFRG+GRR G+RRRKSVRGCIV+PDLSVLNLV VKKGEND
Sbjct: 63  MKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 122

Query: 147 LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG---GKAPKIQR 206
           LPGLT  EKPRMRGPKRASKIRKLFNL K+DDVR YVNTYRR FTNK G    KAPKIQR
Sbjct: 123 LPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKIQR 182

Query: 207 LVTPLALQDKRGWISEKKKRIAQAKSEAAECQKLLASRVKEQRERRSESLAKRRSTL-SA 266
           LVTPL LQ KR  I++KKK+IA+A S+AA+ QKLLASR+KEQR+RRSESLAK+RS L SA
Sbjct: 183 LVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLSSA 242

Query: 267 ASKPSSAA 268
           A+KPS  A
Sbjct: 243 AAKPSVTA 250

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BLAST of CsGy6G029540 vs. ExPASy Swiss-Prot
Match: P51430 (40S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3)

HSP 1 Score: 278.1 bits (710), Expect = 1.0e-73
Identity = 164/247 (66.40%), Postives = 187/247 (75.71%), Query Frame = 0


Query: 27  FNIATPTTGCQKKLQIDDDAKLR--FD-YFSHKTNYLKSKHSWILSHFNILNAADHFGTR 86
           FN+A PTTGCQKKL+IDDD KLR  FD   S + +       +    F I+   D  G  
Sbjct: 3   FNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQGFP 62

Query: 87  GSPKKLMEMRLVKSLKRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 146
                L   R+   L RGTPCFRG+GRR G+RRRKSVRGCIV+PDLSVLNLV VKKG +D
Sbjct: 63  MKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGVSD 122

Query: 147 LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG---GKAPKIQR 206
           LPGLT  EKPRMRGPKRASKIRKLFNL K+DDVRKYVNTYRRTFTNK G    KAPKIQR
Sbjct: 123 LPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKIQR 182

Query: 207 LVTPLALQDKRGWISEKKKRIAQAKSEAAECQKLLASRVKEQRERRSESLAKRRSTLSAA 266
           LVTPL LQ KR  I++KKKRIA+A S+AA+ QKLLASR+KEQR+RRSESLAK+RS LS+A
Sbjct: 183 LVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLSSA 242

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BLAST of CsGy6G029540 vs. ExPASy Swiss-Prot
Match: P29345 (40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPS6 PE=2 SV=2)

HSP 1 Score: 230.7 bits (587), Expect = 1.9e-59
Identity = 134/197 (68.02%), Postives = 148/197 (75.13%), Query Frame = 0


Query: 71  FNILNAADHFGTRGSPKKLMEMRLVKSLKRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLS 130
           F I+   D  G       L   R+   L RGTPCFRGYGRR G+RRRKSVRGCIV+PDLS
Sbjct: 5   FKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVSPDLS 64

Query: 131 VLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNK 190
           VLNLV VKKGENDLPGLT  EKPRMRGP+   +   L+   K+DDVRKYVNT     T  
Sbjct: 65  VLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALY--FKEDDVRKYVNTTAEFTTKW 124

Query: 191 LGGKAPKIQRLVTPLALQDKRGWISEKKKRIAQAKSEAAECQKLLASRVKEQRERRSESL 250
            G KAPKIQRLVTPL LQ KR  I++KKKRIA+AKSEAAE QKLLASR+KEQRE+RSESL
Sbjct: 125 KGSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQREKRSESL 184

Query: 251 AKRRSTLSAASKPSSAA 268
           AK+RS LSAASKPS AA
Sbjct: 185 AKKRSRLSAASKPSIAA 199

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BLAST of CsGy6G029540 vs. ExPASy Swiss-Prot
Match: P62753 (40S ribosomal protein S6 OS=Homo sapiens OX=9606 GN=RPS6 PE=1 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.3e-44
Identity = 123/249 (49.40%), Postives = 153/249 (61.45%), Query Frame = 0


Query: 28  NIATPTTGCQKKLQIDDDAKLRFDYFSHKTNYLKSK---HSWILSHFNILNAADHFGTRG 87
           NI+ P TGCQK +++DD+ KLR  Y       + +      W      I    D  G   
Sbjct: 4   NISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPM 63

Query: 88  SPKKLMEMRLVKSLKRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDL 147
               L   R+   L +G  C+R   RR G+R+RKSVRGCIV+ +LSVLNLV VKKGE D+
Sbjct: 64  KQGVLTHGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 123

Query: 148 PGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG----GKAPKIQR 207
           PGLT    PR  GPKRAS+IRKLFNLSK+DDVR+YV    R   NK G     KAPKIQR
Sbjct: 124 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRKPLNKEGKKPRTKAPKIQR 183

Query: 208 LVTPLALQDKRGWISEKKKRIAQAKSEAAECQKLLASRVKEQRERRSESLAKRR--STLS 267
           LVTP  LQ KR  I+ KK+R  + K EAAE  KLLA R+KE +E+R E +AKRR  S+L 
Sbjct: 184 LVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLR 243

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BLAST of CsGy6G029540 vs. NCBI nr
Match: KGN49149.2 (hypothetical protein Csa_004089 [Cucumis sativus])

HSP 1 Score: 429 bits (1104), Expect = 2.03e-150
Identity = 233/267 (87.27%), Postives = 235/267 (88.01%), Query Frame = 0


Query: 1   MWFGLVSNPDLRESRQWLKPTHSSNIFNIATPTTGCQKKLQIDDDAKLRFDYFSHKTNYL 60
           MWFGLVSNPDLRESRQWLKPTHSSNIFNIATPTTGCQKKLQIDDDAKLRFDYFSH+TNYL
Sbjct: 1   MWFGLVSNPDLRESRQWLKPTHSSNIFNIATPTTGCQKKLQIDDDAKLRFDYFSHETNYL 60

Query: 61  KSKHSWILSHFNILNAADHFGTRGSPKKLMEMRLVKSLKRGTPCFRGYGRRKGKRRRKSV 120
           KSKHSWILSHFN+LNAADHFGTRGSPKKLMEMRLVK              R GKRRRKSV
Sbjct: 61  KSKHSWILSHFNVLNAADHFGTRGSPKKLMEMRLVK--------------RNGKRRRKSV 120

Query: 121 RGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYV 180
           RGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVR   
Sbjct: 121 RGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVR--- 180

Query: 181 NTYRRTFTNKLGGKAPKIQRLVTPLALQDKRGWISEKKKRIAQAKSEAAECQKLLASRVK 240
                        KAPKIQRLVTPLALQ KRGWISEKKKRIAQAKSEAAECQKLLASRVK
Sbjct: 181 ------------NKAPKIQRLVTPLALQRKRGWISEKKKRIAQAKSEAAECQKLLASRVK 238

Query: 241 EQRERRSESLAKRRSTLSAASKPSSAA 267
           EQRERRSESLAKRRSTLSAASKPSSAA
Sbjct: 241 EQRERRSESLAKRRSTLSAASKPSSAA 238

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BLAST of CsGy6G029540 vs. NCBI nr
Match: XP_038882784.1 (40S ribosomal protein S6-like [Benincasa hispida])

HSP 1 Score: 303 bits (775), Expect = 3.47e-100
Identity = 178/244 (72.95%), Postives = 189/244 (77.46%), Query Frame = 0


Query: 27  FNIATPTTGCQKKLQIDDDAKLRFDY---FSHKTNYLKSKHSWILSHFNILNAADHFGTR 86
           FNIA PTTGCQKKL+IDDDAKLR  +    S + N       +    F I+   D  G  
Sbjct: 3   FNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFP 62

Query: 87  GSPKKLMEMRLVKSLKRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 146
                L   R+   L RGTPCFRGYGRR G+RRRKSVRGCIVNPDLSVLNLV VKKGEND
Sbjct: 63  MKQGVLTTGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVNPDLSVLNLVIVKKGEND 122

Query: 147 LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG---GKAPKIQR 206
           LPGLT I+KPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNK G    KAPKIQR
Sbjct: 123 LPGLTDIDKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKAGKKCSKAPKIQR 182

Query: 207 LVTPLALQDKRGWISEKKKRIAQAKSEAAECQKLLASRVKEQRERRSESLAKRRSTLSAA 264
           LVTP  LQ KRG I+EKKKRIA+AKSEAAE QKLLASR+KEQRERRSESLAKRRS LS A
Sbjct: 183 LVTPFTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGA 242

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BLAST of CsGy6G029540 vs. NCBI nr
Match: XP_022133330.1 (40S ribosomal protein S6-like [Momordica charantia])

HSP 1 Score: 299 bits (766), Expect = 8.07e-99
Identity = 180/249 (72.29%), Postives = 192/249 (77.11%), Query Frame = 0


Query: 27  FNIATPTTGCQKKLQIDDDAKLRFDYFSHKTNYLKSKHSWILSHFN-----ILNAADHFG 86
           FNIA PTTGCQKKL+IDDDAKLR   F  K    +     +   FN     I+   D  G
Sbjct: 3   FNIANPTTGCQKKLEIDDDAKLRA--FWDKRISQEVSGDALGEEFNGYVFKIMGGCDKQG 62

Query: 87  TRGSPKKLMEMRLVKSLKRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGE 146
                  L   R+   L RGTPCFRG+GRR G+RRRKSVRGCIV+PDLSVLNLV VKKGE
Sbjct: 63  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 122

Query: 147 NDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG---GKAPKI 206
           NDLPGLT IEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFT K G    KAPKI
Sbjct: 123 NDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKI 182

Query: 207 QRLVTPLALQDKRGWISEKKKRIAQAKSEAAECQKLLASRVKEQRERRSESLAKRRSTLS 266
           QRLVTPL LQ KRG I+EKKKRIA+AKSEAAE QKLLASR+KEQRERRSESLAKRRS LS
Sbjct: 183 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLS 242

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BLAST of CsGy6G029540 vs. NCBI nr
Match: XP_042402741.1 (40S ribosomal protein S6-like [Zingiber officinale] >XP_042406276.1 40S ribosomal protein S6-like [Zingiber officinale] >KAG6499563.1 hypothetical protein ZIOFF_039353 [Zingiber officinale])

HSP 1 Score: 299 bits (766), Expect = 8.07e-99
Identity = 179/247 (72.47%), Postives = 190/247 (76.92%), Query Frame = 0


Query: 27  FNIATPTTGCQKKLQIDDDAKLRFDY---FSHKTNYLKSKHSWILSHFNILNAADHFGTR 86
           FNIA PTTGCQKKL+IDDD KLR  Y    S + +       +    F I+   D  G  
Sbjct: 3   FNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFP 62

Query: 87  GSPKKLMEMRLVKSLKRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 146
                L   R+   L RGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKGEND
Sbjct: 63  MKQGVLTTGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 122

Query: 147 LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG---GKAPKIQR 206
           LPGLT IEKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYRRTFT K G    KAPKIQR
Sbjct: 123 LPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKRSKAPKIQR 182

Query: 207 LVTPLALQDKRGWISEKKKRIAQAKSEAAECQKLLASRVKEQRERRSESLAKRRSTLSAA 266
           LVTPL LQ KR  ISEKKKRIA+AKSEAAE QKLLASR+KEQRERRSESLAKRRS LSAA
Sbjct: 183 LVTPLTLQRKRSRISEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSAA 242

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BLAST of CsGy6G029540 vs. NCBI nr
Match: KAG0492429.1 (hypothetical protein HPP92_005827 [Vanilla planifolia])

HSP 1 Score: 298 bits (764), Expect = 1.80e-98
Identity = 176/245 (71.84%), Postives = 189/245 (77.14%), Query Frame = 0


Query: 27  FNIATPTTGCQKKLQIDDDAKLRFDY---FSHKTNYLKSKHSWILSHFNILNAADHFGTR 86
           FNIA PTTGCQKKL+IDDD KLR  Y    S + +       +    F I+   D  G  
Sbjct: 3   FNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSVDALGEEFKGYVFKIMGGCDKQGFP 62

Query: 87  GSPKKLMEMRLVKSLKRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 146
                L   R+   L RGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKGEND
Sbjct: 63  MKQGVLTPGRVRLLLSRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 122

Query: 147 LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG----GKAPKIQ 206
           LPGLT IEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFT+K G     KAPKIQ
Sbjct: 123 LPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTSKTGKKKCSKAPKIQ 182

Query: 207 RLVTPLALQDKRGWISEKKKRIAQAKSEAAECQKLLASRVKEQRERRSESLAKRRSTLSA 264
           RLVTPL LQ KR  I++KKKRIA+AKSEAAE QKLLASR+KEQRERRSESLAKRRS LSA
Sbjct: 183 RLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSA 242

[Close]

BLAST of CsGy6G029540 vs. ExPASy TrEMBL
Match: A0A6J1BUY4 (40S ribosomal protein S6 OS=Momordica charantia OX=3673 GN=LOC111005938 PE=3 SV=1)

HSP 1 Score: 299 bits (766), Expect = 3.91e-99
Identity = 180/249 (72.29%), Postives = 192/249 (77.11%), Query Frame = 0


Query: 27  FNIATPTTGCQKKLQIDDDAKLRFDYFSHKTNYLKSKHSWILSHFN-----ILNAADHFG 86
           FNIA PTTGCQKKL+IDDDAKLR   F  K    +     +   FN     I+   D  G
Sbjct: 3   FNIANPTTGCQKKLEIDDDAKLRA--FWDKRISQEVSGDALGEEFNGYVFKIMGGCDKQG 62

Query: 87  TRGSPKKLMEMRLVKSLKRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGE 146
                  L   R+   L RGTPCFRG+GRR G+RRRKSVRGCIV+PDLSVLNLV VKKGE
Sbjct: 63  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 122

Query: 147 NDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG---GKAPKI 206
           NDLPGLT IEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFT K G    KAPKI
Sbjct: 123 NDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKSGKKCSKAPKI 182

Query: 207 QRLVTPLALQDKRGWISEKKKRIAQAKSEAAECQKLLASRVKEQRERRSESLAKRRSTLS 266
           QRLVTPL LQ KRG I+EKKKRIA+AKSEAAE QKLLASR+KEQRERRSESLAKRRS LS
Sbjct: 183 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLS 242

[Close]

BLAST of CsGy6G029540 vs. ExPASy TrEMBL
Match: M5VZU7 (40S ribosomal protein S6 OS=Prunus persica OX=3760 GN=PRUPE_6G192100 PE=3 SV=1)

HSP 1 Score: 296 bits (758), Expect = 6.20e-98
Identity = 173/246 (70.33%), Postives = 191/246 (77.64%), Query Frame = 0


Query: 27  FNIATPTTGCQKKLQIDDDAKLRFDY---FSHKTNYLKSKHSWILSHFNILNAADHFGTR 86
           FNIA PTTGCQKKL+IDDDAKLR  +    S + N       +    F I+   D  G  
Sbjct: 3   FNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFP 62

Query: 87  GSPKKLMEMRLVKSLKRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 146
                L   R+   L RGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKG+ND
Sbjct: 63  MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGDND 122

Query: 147 LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG---GKAPKIQR 206
           LPGLT +EKPRMRGPKRASKIRKLFNL+KDDDVRKYVNTYRRTFT+K G    KAPKIQR
Sbjct: 123 LPGLTDVEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRTFTSKTGKKCSKAPKIQR 182

Query: 207 LVTPLALQDKRGWISEKKKRIAQAKSEAAECQKLLASRVKEQRERRSESLAKRRSTLSAA 266
           LVTPL LQ KR  I+EKKKR+A+AKSEAAE QKLLASR+KEQR+RRSESLAKRRS LS A
Sbjct: 183 LVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKEQRDRRSESLAKRRSRLSGA 242

[Close]

BLAST of CsGy6G029540 vs. ExPASy TrEMBL
Match: A0A6J5XSH6 (40S ribosomal protein S6 OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS38971 PE=3 SV=1)

HSP 1 Score: 296 bits (758), Expect = 6.20e-98
Identity = 173/246 (70.33%), Postives = 191/246 (77.64%), Query Frame = 0


Query: 27  FNIATPTTGCQKKLQIDDDAKLRFDY---FSHKTNYLKSKHSWILSHFNILNAADHFGTR 86
           FNIA PTTGCQKKL+IDDDAKLR  +    S + N       +    F I+   D  G  
Sbjct: 3   FNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFP 62

Query: 87  GSPKKLMEMRLVKSLKRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 146
                L   R+   L RGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKG+ND
Sbjct: 63  MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGDND 122

Query: 147 LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG---GKAPKIQR 206
           LPGLT +EKPRMRGPKRASKIRKLFNL+KDDDVRKYVNTYRRTFT+K G    KAPKIQR
Sbjct: 123 LPGLTDVEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRTFTSKTGKKCSKAPKIQR 182

Query: 207 LVTPLALQDKRGWISEKKKRIAQAKSEAAECQKLLASRVKEQRERRSESLAKRRSTLSAA 266
           LVTPL LQ KR  I+EKKKR+A+AKSEAAE QKLLASR+KEQR+RRSESLAKRRS LS A
Sbjct: 183 LVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKEQRDRRSESLAKRRSRLSGA 242

[Close]

BLAST of CsGy6G029540 vs. ExPASy TrEMBL
Match: A0A6P5SRV1 (40S ribosomal protein S6 OS=Prunus avium OX=42229 GN=LOC110758777 PE=3 SV=1)

HSP 1 Score: 296 bits (758), Expect = 6.20e-98
Identity = 173/246 (70.33%), Postives = 191/246 (77.64%), Query Frame = 0


Query: 27  FNIATPTTGCQKKLQIDDDAKLRFDY---FSHKTNYLKSKHSWILSHFNILNAADHFGTR 86
           FNIA PTTGCQKKL+IDDDAKLR  +    S + N       +    F I+   D  G  
Sbjct: 3   FNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVNGDALGEEFKGYLFKIMGGCDKQGFP 62

Query: 87  GSPKKLMEMRLVKSLKRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 146
                L   R+   L RGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKG+ND
Sbjct: 63  MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGDND 122

Query: 147 LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG---GKAPKIQR 206
           LPGLT +EKPRMRGPKRASKIRKLFNL+KDDDVRKYVNTYRRTFT+K G    KAPKIQR
Sbjct: 123 LPGLTDVEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRTFTSKTGKKCSKAPKIQR 182

Query: 207 LVTPLALQDKRGWISEKKKRIAQAKSEAAECQKLLASRVKEQRERRSESLAKRRSTLSAA 266
           LVTPL LQ KR  I+EKKKR+A+AKSEAAE QKLLASR+KEQR+RRSESLAKRRS LS A
Sbjct: 183 LVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKEQRDRRSESLAKRRSRLSGA 242

[Close]

BLAST of CsGy6G029540 vs. ExPASy TrEMBL
Match: A0A6J1BQQ2 (40S ribosomal protein S6 OS=Momordica charantia OX=3673 GN=LOC111004918 PE=3 SV=1)

HSP 1 Score: 296 bits (757), Expect = 9.09e-98
Identity = 177/248 (71.37%), Postives = 191/248 (77.02%), Query Frame = 0


Query: 27  FNIATPTTGCQKKLQIDDDAKLRFDYFSHKTNYLKSKHSWILSH----FNILNAADHFGT 86
           FNIA PTTGCQKKL+IDDD KLR  +F  + +   S  S         F I+   D  G 
Sbjct: 3   FNIANPTTGCQKKLEIDDDQKLRA-FFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGF 62

Query: 87  RGSPKKLMEMRLVKSLKRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEN 146
                 L   R+   L RGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKG+N
Sbjct: 63  PMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGDN 122

Query: 147 DLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG---GKAPKIQ 206
           DLPGLT  EKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYRRTFT K G    KAPKIQ
Sbjct: 123 DLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQ 182

Query: 207 RLVTPLALQDKRGWISEKKKRIAQAKSEAAECQKLLASRVKEQRERRSESLAKRRSTLSA 266
           RLVTPL LQ KRG I+EKKKRIA+AKSEAAE QKLLASR+KEQRERRSESLAK+RS LSA
Sbjct: 183 RLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSA 242

[Close]

BLAST of CsGy6G029540 vs. TAIR 10
Match: AT4G31700.1 (ribosomal protein S6 )

HSP 1 Score: 278.5 bits (711), Expect = 5.7e-75
Identity = 164/248 (66.13%), Postives = 184/248 (74.19%), Query Frame = 0


Query: 27  FNIATPTTGCQKKLQIDDDAKLRFDY---FSHKTNYLKSKHSWILSHFNILNAADHFGTR 86
           FN+A PTTGCQKKL+IDDD KLR  Y    S + +       +    F I    D  G  
Sbjct: 3   FNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQGFP 62

Query: 87  GSPKKLMEMRLVKSLKRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 146
                L   R+   L RGTPCFRG+GRR G+RRRKSVRGCIV+PDLSVLNLV VKKGEND
Sbjct: 63  MKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 122

Query: 147 LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG---GKAPKIQR 206
           LPGLT  EKPRMRGPKRASKIRKLFNL K+DDVR YVNTYRR FTNK G    KAPKIQR
Sbjct: 123 LPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKIQR 182

Query: 207 LVTPLALQDKRGWISEKKKRIAQAKSEAAECQKLLASRVKEQRERRSESLAKRRSTL-SA 266
           LVTPL LQ KR  I++KKK+IA+A S+AA+ QKLLASR+KEQR+RRSESLAK+RS L SA
Sbjct: 183 LVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLSSA 242

Query: 267 ASKPSSAA 268
           A+KPS  A
Sbjct: 243 AAKPSVTA 250

[Close]

BLAST of CsGy6G029540 vs. TAIR 10
Match: AT5G10360.1 (Ribosomal protein S6e )

HSP 1 Score: 278.1 bits (710), Expect = 7.5e-75
Identity = 164/247 (66.40%), Postives = 187/247 (75.71%), Query Frame = 0


Query: 27  FNIATPTTGCQKKLQIDDDAKLR--FD-YFSHKTNYLKSKHSWILSHFNILNAADHFGTR 86
           FN+A PTTGCQKKL+IDDD KLR  FD   S + +       +    F I+   D  G  
Sbjct: 3   FNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQGFP 62

Query: 87  GSPKKLMEMRLVKSLKRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 146
                L   R+   L RGTPCFRG+GRR G+RRRKSVRGCIV+PDLSVLNLV VKKG +D
Sbjct: 63  MKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGVSD 122

Query: 147 LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG---GKAPKIQR 206
           LPGLT  EKPRMRGPKRASKIRKLFNL K+DDVRKYVNTYRRTFTNK G    KAPKIQR
Sbjct: 123 LPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKIQR 182

Query: 207 LVTPLALQDKRGWISEKKKRIAQAKSEAAECQKLLASRVKEQRERRSESLAKRRSTLSAA 266
           LVTPL LQ KR  I++KKKRIA+A S+AA+ QKLLASR+KEQR+RRSESLAK+RS LS+A
Sbjct: 183 LVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLSSA 242

[Close]

BLAST of CsGy6G029540 vs. TAIR 10
Match: AT4G31700.2 (ribosomal protein S6 )

HSP 1 Score: 246.5 bits (628), Expect = 2.4e-65
Identity = 137/174 (78.74%), Postives = 151/174 (86.78%), Query Frame = 0


Query: 98  LKRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRG 157
           L RGTPCFRG+GRR G+RRRKSVRGCIV+PDLSVLNLV VKKGENDLPGLT  EKPRMRG
Sbjct: 15  LHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDTEKPRMRG 74

Query: 158 PKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLG---GKAPKIQRLVTPLALQDKRGWI 217
           PKRASKIRKLFNL K+DDVR YVNTYRR FTNK G    KAPKIQRLVTPL LQ KR  I
Sbjct: 75  PKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARI 134

Query: 218 SEKKKRIAQAKSEAAECQKLLASRVKEQRERRSESLAKRRSTL-SAASKPSSAA 268
           ++KKK+IA+A S+AA+ QKLLASR+KEQR+RRSESLAK+RS L SAA+KPS  A
Sbjct: 135 ADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPSVTA 188

[Close]

BLAST of CsGy6G029540 vs. TAIR 10
Match: AT5G10360.2 (Ribosomal protein S6e )

HSP 1 Score: 171.4 bits (433), Expect = 9.8e-43
Identity = 120/244 (49.18%), Postives = 141/244 (57.79%), Query Frame = 0


Query: 27  FNIATPTTGCQKKLQIDDDAKLR--FD-YFSHKTNYLKSKHSWILSHFNILNAADHFGTR 86
           FN+A PTTGCQKKL+IDDD KLR  FD   S + +       +    F I+   D  G  
Sbjct: 3   FNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQGFP 62

Query: 87  GSPKKLMEMRLVKSLKRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGEND 146
                L   R+   L RGTPCFRG+GRR G+RRRKSVRGCIV+PDLSVLNLV VKKG   
Sbjct: 63  MKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKG--- 122

Query: 147 LPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLGGKAPKIQRLVT 206
                                                         K   KAPKIQRLVT
Sbjct: 123 ----------------------------------------------KKVSKAPKIQRLVT 182

Query: 207 PLALQDKRGWISEKKKRIAQAKSEAAECQKLLASRVKEQRERRSESLAKRRSTLSAA-SK 266
           PL LQ KR  I++KKKRIA+A S+AA+ QKLLASR+KEQR+RRSESLAK+RS LS+A +K
Sbjct: 183 PLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAPAK 197

The following BLAST results are available for this feature:

BLAST of CsGy6G029540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3V8	8.3e-79	68.70	40S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1	[more]
O48549	8.0e-74	66.13	40S ribosomal protein S6-1 OS=Arabidopsis thaliana OX=3702 GN=RPS6A PE=1 SV=2	[more]
P51430	1.0e-73	66.40	40S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3	[more]
P29345	1.9e-59	68.02	40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPS6 PE=2 SV...	[more]
P62753	1.3e-44	49.40	40S ribosomal protein S6 OS=Homo sapiens OX=9606 GN=RPS6 PE=1 SV=1	[more]

BLAST of CsGy6G029540 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN49149.2	2.03e-150	87.27	hypothetical protein Csa_004089 [Cucumis sativus]	[more]
XP_038882784.1	3.47e-100	72.95	40S ribosomal protein S6-like [Benincasa hispida]	[more]
XP_022133330.1	8.07e-99	72.29	40S ribosomal protein S6-like [Momordica charantia]	[more]
XP_042402741.1	8.07e-99	72.47	40S ribosomal protein S6-like [Zingiber officinale] >XP_042406276.1 40S ribosoma...	[more]
KAG0492429.1	1.80e-98	71.84	hypothetical protein HPP92_005827 [Vanilla planifolia]	[more]

BLAST of CsGy6G029540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BUY4	3.91e-99	72.29	40S ribosomal protein S6 OS=Momordica charantia OX=3673 GN=LOC111005938 PE=3 SV=...	[more]
M5VZU7	6.20e-98	70.33	40S ribosomal protein S6 OS=Prunus persica OX=3760 GN=PRUPE_6G192100 PE=3 SV=1	[more]
A0A6J5XSH6	6.20e-98	70.33	40S ribosomal protein S6 OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS38971 PE=3 ...	[more]
A0A6P5SRV1	6.20e-98	70.33	40S ribosomal protein S6 OS=Prunus avium OX=42229 GN=LOC110758777 PE=3 SV=1	[more]
A0A6J1BQQ2	9.09e-98	71.37	40S ribosomal protein S6 OS=Momordica charantia OX=3673 GN=LOC111004918 PE=3 SV=...	[more]

BLAST of CsGy6G029540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31700.1	5.7e-75	66.13	ribosomal protein S6	[more]
AT5G10360.1	7.5e-75	66.40	Ribosomal protein S6e	[more]
AT4G31700.2	2.4e-65	78.74	ribosomal protein S6	[more]
AT5G10360.2	9.8e-43	49.18	Ribosomal protein S6e	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 214..234
None	No IPR available	GENE3D	1.20.5.2650		coord: 154..252 e-value: 1.4E-33 score: 117.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 253..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..267
None	No IPR available	PANTHER	PTHR11502:SF22	40S RIBOSOMAL PROTEIN S6-LIKE	coord: 27..267
IPR001377	Ribosomal protein S6e	SMART	SM01405	Ribosomal_S6e_2	coord: 25..149 e-value: 5.1E-17 score: 72.5
IPR001377	Ribosomal protein S6e	PFAM	PF01092	Ribosomal_S6e	coord: 27..149 e-value: 1.1E-18 score: 67.4
IPR001377	Ribosomal protein S6e	PANTHER	PTHR11502	40S RIBOSOMAL PROTEIN S6	coord: 27..267
IPR014401	Ribosomal protein S6, eukaryotic	PIRSF	PIRSF002129	RPS6e	coord: 26..267 e-value: 1.1E-69 score: 232.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G029540.2	CsGy6G029540.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome