CsGy6G028945 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G028945
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr6: 27700546 .. 27700846 (-)
RNA-Seq ExpressionCsGy6G028945
SyntenyCsGy6G028945
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTAGCATCTCTGTTATCATCACCCTAACGTCTGCTATCACAGATTTGGTGGCGTTTGTGGATGTAGAGTAGTTTGTTTGCTCCATCCAGGAGTTAGGAATGGTATTTTCTTTCCATTTTCTTTAATTTCCCCAGAATGTTGTATAAGTATGATTTTCAGGCTGTAAGGAGAGTGGTAGTGGCTAGTGAGCCCCAAGAATGCCTCTTCAGGACCTCCGATGTACTTATAATTAGGGTTGTACAGGGAATGAATGACGCAGACTCACTGAAGCTGAGAAATGGTCCACAAAAACGCTGA

mRNA sequence

ATGCTTAGCATCTCTGTTATCATCACCCTAACGTCTGCTATCACAGATTTGGTGGCGTTTGTGGATGCTGTAAGGAGAGTGGTAGTGGCTAGTGAGCCCCAAGAATGCCTCTTCAGGACCTCCGATGTACTTATAATTAGGGTTGTACAGGGAATGAATGACGCAGACTCACTGAAGCTGAGAAATGGTCCACAAAAACGCTGA

Coding sequence (CDS)

ATGCTTAGCATCTCTGTTATCATCACCCTAACGTCTGCTATCACAGATTTGGTGGCGTTTGTGGATGCTGTAAGGAGAGTGGTAGTGGCTAGTGAGCCCCAAGAATGCCTCTTCAGGACCTCCGATGTACTTATAATTAGGGTTGTACAGGGAATGAATGACGCAGACTCACTGAAGCTGAGAAATGGTCCACAAAAACGCTGA

Protein sequence

MLSISVIITLTSAITDLVAFVDAVRRVVVASEPQECLFRTSDVLIIRVVQGMNDADSLKLRNGPQKR*
Homology
[Close]
BLAST of CsGy6G028945 vs. NCBI nr
Match: KGN48662.1 (hypothetical protein Csa_004196 [Cucumis sativus])

HSP 1 Score: 122 bits (307), Expect = 6.70e-35
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MLSISVIITLTSAITDLVAFVDAVRRVVVASEPQECLFRTSDVLIIRVVQGMNDADSLKL 60
          MLSISVIITLTSAITDLVAFVDAVRRVVVASEPQECLFRTSDVLIIRVVQGMNDADSLKL
Sbjct: 1  MLSISVIITLTSAITDLVAFVDAVRRVVVASEPQECLFRTSDVLIIRVVQGMNDADSLKL 60

Query: 61 RNGPQKR 67
          RNGPQKR
Sbjct: 61 RNGPQKR 67

[Close]
BLAST of CsGy6G028945 vs. ExPASy TrEMBL
Match: A0A0A0KJU0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497130 PE=4 SV=1)

HSP 1 Score: 122 bits (307), Expect = 3.24e-35
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MLSISVIITLTSAITDLVAFVDAVRRVVVASEPQECLFRTSDVLIIRVVQGMNDADSLKL 60
          MLSISVIITLTSAITDLVAFVDAVRRVVVASEPQECLFRTSDVLIIRVVQGMNDADSLKL
Sbjct: 1  MLSISVIITLTSAITDLVAFVDAVRRVVVASEPQECLFRTSDVLIIRVVQGMNDADSLKL 60

Query: 61 RNGPQKR 67
          RNGPQKR
Sbjct: 61 RNGPQKR 67

The following BLAST results are available for this feature:
BLAST of CsGy6G028945 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy6G028945 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN48662.16.70e-35100.00hypothetical protein Csa_004196 [Cucumis sativus][more]
BLAST of CsGy6G028945 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJU03.24e-35100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497130 PE=4 SV=1[more]
BLAST of CsGy6G028945 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G028945.1CsGy6G028945.1mRNA