CsGy6G027980 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G027980
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPentatricopeptide repeat
LocationGy14Chr6: 27007391 .. 27009339 (-)
RNA-Seq ExpressionCsGy6G027980
SyntenyCsGy6G027980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAATGATTGAATGAACACCCAAACGATGTCGTCTTCTTCCATTTTCACGGCGTCACATCCATCGCCGCCGTCAATTTTCACTACCAACCGTTCATCTGTCTTACCATCTTCTTCATCCACCGCCAGAACCTCCGATCGTTTCCAAGAAGTAGAAAGGTTTGCTTCACTTATCGATAAATCGAAATCCGTTGCCCATCTGCTTCAAATCCACGCTTCTCTTCTCCGTCGCGGTCTTTACCACAACCCCATCTTAAATTTCAAGCTCCAACGTTCATACGCTGCTCTCGGACGCCTTGATTGCTCCGTATTCGTTTTTAACACCTTCGATGAACCCAATGTCTTTTCGTTCAGTGCAATTATCCACAGCCACGTACAATCCCGCTTATTTGACCGAGCTTTCGGTTACTATTCTCAAATGCTAAGCTGTGGTGTGGAGCCCAATGCTTTCACCTTCTCCTCAGTCTTAAAATCCTGCTCGCTCGAATCCGGAAAGGTCCTCCATTGCCAAGCAATAAAGCTCGGATTAGGCTCTGATTTGTATGTCAGAACAGGACTGGTCGATGTATACGCGAGAGGGGGCGATGTTGTGTGCGCACGGCAACTGTTTGATAAAATGCCTGAGAGAAGTTTGGTTTCTTTAACGACCATGCTTACTTGTTACTCGAAGATGGGGGAGCTTGACAAGGCACGGTCTTTGTTCGAAGGAATGAAAGAGAGGGACGTGGTTTGTTGGAATGTGATGATTGGTGGCTATGCGCAAAGTGGTGTACCTAACGAGTCGTTGAAGCTTTTCAGGCGAATGTTGGTGGCGAAAGCCATCCCCAATGAAGTTACAGTTCTAGCTGTGCTTTCAGCATGTGGGCAACTTGGAGCCCTCGAATCAGGAAGGTGGATTCATTCGTATATTGAGAATAAGGGCATTCAAATAAATGTTCATGTGGGCACCGCACTTATTGATATGTATAGCAAATGTGGTAGCTTGGAAGATGCACGTTTGGTATTTGATAGGATTAGGGATAAGGATGTGGTCGCCTGGAATTCAATGATTGTTGGGTATGCAATGCACGGATTTAGCCAACATGCGTTGCAGTTGTTCGAGGAAATGACTGAGACCGGACACAAGCCAACTGATATCACTTTCATTGGCATTTTGAGTGCCTGCGGCCATGGTGGATTGGTAGAGGAGGGAAGGAGCTTCTTCAGATTGATGAGAGATAAATACGGAATTGAACCGAAGATCGAGCATTATGGATGTATGGTTAATCTTCTAGGACGTGCAGGACATCTTGAAGAAGCATATGGACTCGTGAAAAATATGACAATCGCAGCTGACCCGGTGTTATGGGGAACGTTACTTGGGTGTTGTAGACTCCATGTTAACATTAAATTGGGAGAAGAAATTGCTAAGTTTCTTGTTGATCAGAAGCTTGCAAATTCAGGGACTTATGTTCTTCTATCCAATATGTATGCTGCAACAGGCAATTGGGAAGGGGTTGCAAAGATGAGGACATTGATGAAAGAACATGGCATCGAGAAGGAGCATGGTTGCAGCTCAATTGAAGTCGATAATAAGGTGCATGAGTTTGTTGCTGGTGAGCGGAAACATCCCAAAAGCAAAGAAATATATGTGATGTTGAATGAGATAAATAGCTGGCTCAAGGCTCGCGGATACACACCACAGACCGATGTCGTTTTACATGATCTCAGGGAGGAACAGAAAGAGCAATCGCTCGAAGTTCACAGCGAGAAGCTAGCTATTGCCTTTGGGCTTATCAGTACTAAACCAGGAACCACCGTCAAAATTGTTAAGAACCTCCGAGTTTGTTCTGATTGTCATACCGTGATGAAGATGATATCAGAAATCACTGGACGTAAAATAGTAATGAGGGACCGGAATCGCTTCCATCACTTTGAAGATGGATTGTGTTCATGTGGAGATTACTGGTGA

mRNA sequence

CAAATGATTGAATGAACACCCAAACGATGTCGTCTTCTTCCATTTTCACGGCGTCACATCCATCGCCGCCGTCAATTTTCACTACCAACCGTTCATCTGTCTTACCATCTTCTTCATCCACCGCCAGAACCTCCGATCGTTTCCAAGAAGTAGAAAGGTTTGCTTCACTTATCGATAAATCGAAATCCGTTGCCCATCTGCTTCAAATCCACGCTTCTCTTCTCCGTCGCGGTCTTTACCACAACCCCATCTTAAATTTCAAGCTCCAACGTTCATACGCTGCTCTCGGACGCCTTGATTGCTCCGTATTCGTTTTTAACACCTTCGATGAACCCAATGTCTTTTCGTTCAGTGCAATTATCCACAGCCACGTACAATCCCGCTTATTTGACCGAGCTTTCGGTTACTATTCTCAAATGCTAAGCTGTGGTGTGGAGCCCAATGCTTTCACCTTCTCCTCAGTCTTAAAATCCTGCTCGCTCGAATCCGGAAAGGTCCTCCATTGCCAAGCAATAAAGCTCGGATTAGGCTCTGATTTGTATGTCAGAACAGGACTGGTCGATGTATACGCGAGAGGGGGCGATGTTGTGTGCGCACGGCAACTGTTTGATAAAATGCCTGAGAGAAGTTTGGTTTCTTTAACGACCATGCTTACTTGTTACTCGAAGATGGGGGAGCTTGACAAGGCACGGTCTTTGTTCGAAGGAATGAAAGAGAGGGACGTGGTTTGTTGGAATGTGATGATTGGTGGCTATGCGCAAAGTGGTGTACCTAACGAGTCGTTGAAGCTTTTCAGGCGAATGTTGGTGGCGAAAGCCATCCCCAATGAAGTTACAGTTCTAGCTGTGCTTTCAGCATGTGGGCAACTTGGAGCCCTCGAATCAGGAAGGTGGATTCATTCGTATATTGAGAATAAGGGCATTCAAATAAATGTTCATGTGGGCACCGCACTTATTGATATGTATAGCAAATGTGGTAGCTTGGAAGATGCACGTTTGGTATTTGATAGGATTAGGGATAAGGATGTGGTCGCCTGGAATTCAATGATTGTTGGGTATGCAATGCACGGATTTAGCCAACATGCGTTGCAGTTGTTCGAGGAAATGACTGAGACCGGACACAAGCCAACTGATATCACTTTCATTGGCATTTTGAGTGCCTGCGGCCATGGTGGATTGGTAGAGGAGGGAAGGAGCTTCTTCAGATTGATGAGAGATAAATACGGAATTGAACCGAAGATCGAGCATTATGGATGTATGGTTAATCTTCTAGGACGTGCAGGACATCTTGAAGAAGCATATGGACTCGTGAAAAATATGACAATCGCAGCTGACCCGGTGTTATGGGGAACGTTACTTGGGTGTTGTAGACTCCATGTTAACATTAAATTGGGAGAAGAAATTGCTAAGTTTCTTGTTGATCAGAAGCTTGCAAATTCAGGGACTTATGTTCTTCTATCCAATATGTATGCTGCAACAGGCAATTGGGAAGGGGTTGCAAAGATGAGGACATTGATGAAAGAACATGGCATCGAGAAGGAGCATGGTTGCAGCTCAATTGAAGTCGATAATAAGGTGCATGAGTTTGTTGCTGGTGAGCGGAAACATCCCAAAAGCAAAGAAATATATGTGATGTTGAATGAGATAAATAGCTGGCTCAAGGCTCGCGGATACACACCACAGACCGATGTCGTTTTACATGATCTCAGGGAGGAACAGAAAGAGCAATCGCTCGAAGTTCACAGCGAGAAGCTAGCTATTGCCTTTGGGCTTATCAGTACTAAACCAGGAACCACCGTCAAAATTGTTAAGAACCTCCGAGTTTGTTCTGATTGTCATACCGTGATGAAGATGATATCAGAAATCACTGGACGTAAAATAGTAATGAGGGACCGGAATCGCTTCCATCACTTTGAAGATGGATTGTGTTCATGTGGAGATTACTGGTGA

Coding sequence (CDS)

ATGAACACCCAAACGATGTCGTCTTCTTCCATTTTCACGGCGTCACATCCATCGCCGCCGTCAATTTTCACTACCAACCGTTCATCTGTCTTACCATCTTCTTCATCCACCGCCAGAACCTCCGATCGTTTCCAAGAAGTAGAAAGGTTTGCTTCACTTATCGATAAATCGAAATCCGTTGCCCATCTGCTTCAAATCCACGCTTCTCTTCTCCGTCGCGGTCTTTACCACAACCCCATCTTAAATTTCAAGCTCCAACGTTCATACGCTGCTCTCGGACGCCTTGATTGCTCCGTATTCGTTTTTAACACCTTCGATGAACCCAATGTCTTTTCGTTCAGTGCAATTATCCACAGCCACGTACAATCCCGCTTATTTGACCGAGCTTTCGGTTACTATTCTCAAATGCTAAGCTGTGGTGTGGAGCCCAATGCTTTCACCTTCTCCTCAGTCTTAAAATCCTGCTCGCTCGAATCCGGAAAGGTCCTCCATTGCCAAGCAATAAAGCTCGGATTAGGCTCTGATTTGTATGTCAGAACAGGACTGGTCGATGTATACGCGAGAGGGGGCGATGTTGTGTGCGCACGGCAACTGTTTGATAAAATGCCTGAGAGAAGTTTGGTTTCTTTAACGACCATGCTTACTTGTTACTCGAAGATGGGGGAGCTTGACAAGGCACGGTCTTTGTTCGAAGGAATGAAAGAGAGGGACGTGGTTTGTTGGAATGTGATGATTGGTGGCTATGCGCAAAGTGGTGTACCTAACGAGTCGTTGAAGCTTTTCAGGCGAATGTTGGTGGCGAAAGCCATCCCCAATGAAGTTACAGTTCTAGCTGTGCTTTCAGCATGTGGGCAACTTGGAGCCCTCGAATCAGGAAGGTGGATTCATTCGTATATTGAGAATAAGGGCATTCAAATAAATGTTCATGTGGGCACCGCACTTATTGATATGTATAGCAAATGTGGTAGCTTGGAAGATGCACGTTTGGTATTTGATAGGATTAGGGATAAGGATGTGGTCGCCTGGAATTCAATGATTGTTGGGTATGCAATGCACGGATTTAGCCAACATGCGTTGCAGTTGTTCGAGGAAATGACTGAGACCGGACACAAGCCAACTGATATCACTTTCATTGGCATTTTGAGTGCCTGCGGCCATGGTGGATTGGTAGAGGAGGGAAGGAGCTTCTTCAGATTGATGAGAGATAAATACGGAATTGAACCGAAGATCGAGCATTATGGATGTATGGTTAATCTTCTAGGACGTGCAGGACATCTTGAAGAAGCATATGGACTCGTGAAAAATATGACAATCGCAGCTGACCCGGTGTTATGGGGAACGTTACTTGGGTGTTGTAGACTCCATGTTAACATTAAATTGGGAGAAGAAATTGCTAAGTTTCTTGTTGATCAGAAGCTTGCAAATTCAGGGACTTATGTTCTTCTATCCAATATGTATGCTGCAACAGGCAATTGGGAAGGGGTTGCAAAGATGAGGACATTGATGAAAGAACATGGCATCGAGAAGGAGCATGGTTGCAGCTCAATTGAAGTCGATAATAAGGTGCATGAGTTTGTTGCTGGTGAGCGGAAACATCCCAAAAGCAAAGAAATATATGTGATGTTGAATGAGATAAATAGCTGGCTCAAGGCTCGCGGATACACACCACAGACCGATGTCGTTTTACATGATCTCAGGGAGGAACAGAAAGAGCAATCGCTCGAAGTTCACAGCGAGAAGCTAGCTATTGCCTTTGGGCTTATCAGTACTAAACCAGGAACCACCGTCAAAATTGTTAAGAACCTCCGAGTTTGTTCTGATTGTCATACCGTGATGAAGATGATATCAGAAATCACTGGACGTAAAATAGTAATGAGGGACCGGAATCGCTTCCATCACTTTGAAGATGGATTGTGTTCATGTGGAGATTACTGGTGA

Protein sequence

MNTQTMSSSSIFTASHPSPPSIFTTNRSSVLPSSSSTARTSDRFQEVERFASLIDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW*
Homology
BLAST of CsGy6G027980 vs. ExPASy Swiss-Prot
Match: Q9SZT8 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)

HSP 1 Score: 754.2 bits (1946), Expect = 1.2e-216
Identity = 370/616 (60.06%), Postives = 474/616 (76.95%), Query Frame = 0

Query: 35  SSTARTSDRFQEVERFASLIDKSKSVAHLLQIHASLLRRGLY---HNPILNFKLQRSYAA 94
           S+TA    R    E+ A LIDKS+SV  +LQIHA++LR  L      P+LN KL R+YA+
Sbjct: 17  STTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYAS 76

Query: 95  LGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSV 154
            G++  S+ +F+   +P++F F+A I++   + L D+AF  Y Q+LS  + PN FTFSS+
Sbjct: 77  HGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSL 136

Query: 155 LKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLT 214
           LKSCS +SGK++H   +K GLG D YV TGLVDVYA+GGDVV A+++FD+MPERSLVS T
Sbjct: 137 LKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSST 196

Query: 215 TMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLV-AKAI 274
            M+TCY+K G ++ AR+LF+ M ERD+V WNVMI GYAQ G PN++L LF+++L   K  
Sbjct: 197 AMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPK 256

Query: 275 PNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLV 334
           P+E+TV+A LSAC Q+GALE+GRWIH ++++  I++NV V T LIDMYSKCGSLE+A LV
Sbjct: 257 PDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLV 316

Query: 335 FDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTE-TGHKPTDITFIGILSACGHGGL 394
           F+    KD+VAWN+MI GYAMHG+SQ AL+LF EM   TG +PTDITFIG L AC H GL
Sbjct: 317 FNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGL 376

Query: 395 VEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLL 454
           V EG   F  M  +YGI+PKIEHYGC+V+LLGRAG L+ AY  +KNM + AD VLW ++L
Sbjct: 377 VNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVL 436

Query: 455 GCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEK 514
           G C+LH +  LG+EIA++L+   + NSG YVLLSN+YA+ G++EGVAK+R LMKE GI K
Sbjct: 437 GSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVK 496

Query: 515 EHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQ 574
           E G S+IE++NKVHEF AG+R+H KSKEIY ML +I+  +K+ GY P T+ VL DL E +
Sbjct: 497 EPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETE 556

Query: 575 KEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRDRN 634
           KEQSL+VHSE+LAIA+GLISTKPG+ +KI KNLRVCSDCHTV K+IS+ITGRKIVMRDRN
Sbjct: 557 KEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRN 616

Query: 635 RFHHFEDGLCSCGDYW 646
           RFHHF DG CSCGD+W
Sbjct: 617 RFHHFTDGSCSCGDFW 632

BLAST of CsGy6G027980 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 1.4e-148
Identity = 278/639 (43.51%), Postives = 397/639 (62.13%), Query Frame = 0

Query: 32  PSSSSTARTSDRFQEVERFASLIDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAA 91
           P+SS  +  S  F +       I+  +++  L QIHA  ++ G   + +   ++ R  A 
Sbjct: 15  PASSPASHPSSLFPQ-------INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCAT 74

Query: 92  LG----RLDCSVFVFNTFDEPNVFSFSAIIHSHVQS---RLFDRAFGYYSQMLSCGVEPN 151
                  LD +  +FN   + N FS++ II    +S   +       +Y  M    VEPN
Sbjct: 75  SDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPN 134

Query: 152 AFTFSSVLKSCS----LESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFD 211
            FTF SVLK+C+    ++ GK +H  A+K G G D +V + LV +Y   G +  AR LF 
Sbjct: 135 RFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFY 194

Query: 212 K-MPERSLVSLT-------------TMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIG 271
           K + E+ +V +T              M+  Y ++G+   AR LF+ M++R VV WN MI 
Sbjct: 195 KNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMIS 254

Query: 272 GYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQI 331
           GY+ +G   +++++FR M      PN VT+++VL A  +LG+LE G W+H Y E+ GI+I
Sbjct: 255 GYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRI 314

Query: 332 NVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMT 391
           +  +G+ALIDMYSKCG +E A  VF+R+  ++V+ W++MI G+A+HG +  A+  F +M 
Sbjct: 315 DDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMR 374

Query: 392 ETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHL 451
           + G +P+D+ +I +L+AC HGGLVEEGR +F  M    G+EP+IEHYGCMV+LLGR+G L
Sbjct: 375 QAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLL 434

Query: 452 EEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMY 511
           +EA   + NM I  D V+W  LLG CR+  N+++G+ +A  L+D    +SG YV LSNMY
Sbjct: 435 DEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMY 494

Query: 512 AATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEIN 571
           A+ GNW  V++MR  MKE  I K+ GCS I++D  +HEFV  +  HPK+KEI  ML EI+
Sbjct: 495 ASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEIS 554

Query: 572 SWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVCS 631
             L+  GY P T  VL +L EE KE  L  HSEK+A AFGLIST PG  ++IVKNLR+C 
Sbjct: 555 DKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICE 614

Query: 632 DCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 646
           DCH+ +K+IS++  RKI +RDR RFHHF+DG CSC DYW
Sbjct: 615 DCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646

BLAST of CsGy6G027980 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 1.6e-144
Identity = 285/728 (39.15%), Postives = 400/728 (54.95%), Query Frame = 0

Query: 31  LPSSSSTARTSDRFQEVERFASLIDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQR--S 90
           LPSSS     S R        SL+   K++  L  IHA +++ GL++    N+ L +   
Sbjct: 20  LPSSSDPPYDSIRNHP---SLSLLHNCKTLQSLRIIHAQMIKIGLHNT---NYALSKLIE 79

Query: 91  YAALG----RLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPN 150
           +  L      L  ++ VF T  EPN+  ++ +   H  S     A   Y  M+S G+ PN
Sbjct: 80  FCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPN 139

Query: 151 AFTFSSVLKSC----SLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFD 210
           ++TF  VLKSC    + + G+ +H   +KLG   DLYV T L+ +Y + G +  A ++FD
Sbjct: 140 SYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD 199

Query: 211 KMPERSLVSLT------------------------------------------------- 270
           K P R +VS T                                                 
Sbjct: 200 KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 259

Query: 271 --------------TMLT--------------------------------------CYSK 330
                         TM+T                                       YSK
Sbjct: 260 FKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSK 319

Query: 331 MGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAV 390
            GEL+ A  LFE +  +DV+ WN +IGGY    +  E+L LF+ ML +   PN+VT+L++
Sbjct: 320 CGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 379

Query: 391 LSACGQLGALESGRWIHSYIEN--KGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDK 450
           L AC  LGA++ GRWIH YI+   KG+     + T+LIDMY+KCG +E A  VF+ I  K
Sbjct: 380 LPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 439

Query: 451 DVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFF 510
            + +WN+MI G+AMHG +  +  LF  M + G +P DITF+G+LSAC H G+++ GR  F
Sbjct: 440 SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIF 499

Query: 511 RLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVN 570
           R M   Y + PK+EHYGCM++LLG +G  +EA  ++  M +  D V+W +LL  C++H N
Sbjct: 500 RTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGN 559

Query: 571 IKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIE 630
           ++LGE  A+ L+  +  N G+YVLLSN+YA+ G W  VAK R L+ + G++K  GCSSIE
Sbjct: 560 VELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIE 619

Query: 631 VDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVH 646
           +D+ VHEF+ G++ HP+++EIY ML E+   L+  G+ P T  VL ++ EE KE +L  H
Sbjct: 620 IDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHH 679

BLAST of CsGy6G027980 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 7.5e-142
Identity = 249/605 (41.16%), Postives = 378/605 (62.48%), Query Frame = 0

Query: 50  FASLIDKSKSVAHL---LQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFD 109
           F  LI  +  V+ L     +H   ++  +  +  +   L   Y + G LD +  VF T  
Sbjct: 134 FPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK 193

Query: 110 EPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSC----SLESGKV 169
           E +V S++++I+  VQ    D+A   + +M S  V+ +  T   VL +C    +LE G+ 
Sbjct: 194 EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQ 253

Query: 170 LHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGE 229
           +     +  +  +L +   ++D+Y + G +  A++LFD M E+  V+ TTML  Y+   +
Sbjct: 254 VCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 313

Query: 230 LDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIP-NEVTVLAVLS 289
            + AR +   M ++D+V WN +I  Y Q+G PNE+L +F  + + K +  N++T+++ LS
Sbjct: 314 YEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLS 373

Query: 290 ACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVA 349
           AC Q+GALE GRWIHSYI+  GI++N HV +ALI MYSKCG LE +R VF+ +  +DV  
Sbjct: 374 ACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFV 433

Query: 350 WNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMR 409
           W++MI G AMHG    A+ +F +M E   KP  +TF  +  AC H GLV+E  S F  M 
Sbjct: 434 WSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 493

Query: 410 DKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLG 469
             YGI P+ +HY C+V++LGR+G+LE+A   ++ M I     +WG LLG C++H N+ L 
Sbjct: 494 SNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLA 553

Query: 470 EEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNK 529
           E     L++ +  N G +VLLSN+YA  G WE V+++R  M+  G++KE GCSSIE+D  
Sbjct: 554 EMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGM 613

Query: 530 VHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQ-KEQSLEVHSEK 589
           +HEF++G+  HP S+++Y  L+E+   LK+ GY P+   VL  + EE+ KEQSL +HSEK
Sbjct: 614 IHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEK 673

Query: 590 LAIAFGLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCS 646
           LAI +GLIST+    ++++KNLRVC DCH+V K+IS++  R+I++RDR RFHHF +G CS
Sbjct: 674 LAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCS 733

BLAST of CsGy6G027980 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 2.2e-141
Identity = 259/604 (42.88%), Postives = 368/604 (60.93%), Query Frame = 0

Query: 52  SLIDKSKSVAHLLQIHASLLRRGLYHN-----PILNFKLQRSYAALGRLDCSVFVFNTFD 111
           S + +      L QIHA +L+ GL  +       L+F +  S  +   L  +  VF+ FD
Sbjct: 19  SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCI--SSTSSDFLPYAQIVFDGFD 78

Query: 112 EPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKV 171
            P+ F ++ +I     S   +R+   Y +ML      NA+TF S+LK+CS     E    
Sbjct: 79  RPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQ 138

Query: 172 LHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGE 231
           +H Q  KLG  +D+Y    L++ YA  G+   A  LFD++PE   VS  +++  Y K G+
Sbjct: 139 IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGK 198

Query: 232 LDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSA 291
           +D A +LF  M E++ + W  MI GY Q+ +  E+L+LF  M  +   P+ V++   LSA
Sbjct: 199 MDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSA 258

Query: 292 CGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAW 351
           C QLGALE G+WIHSY+    I+++  +G  LIDMY+KCG +E+A  VF  I+ K V AW
Sbjct: 259 CAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAW 318

Query: 352 NSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRD 411
            ++I GYA HG  + A+  F EM + G KP  ITF  +L+AC + GLVEEG+  F  M  
Sbjct: 319 TALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMER 378

Query: 412 KYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGE 471
            Y ++P IEHYGC+V+LLGRAG L+EA   ++ M +  + V+WG LL  CR+H NI+LGE
Sbjct: 379 DYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGE 438

Query: 472 EIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKV 531
           EI + L+     + G YV  +N++A    W+  A+ R LMKE G+ K  GCS+I ++   
Sbjct: 439 EIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTT 498

Query: 532 HEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDL-REEQKEQSLEVHSEKL 591
           HEF+AG+R HP+ ++I      +   L+  GY P+ + +L DL  ++++E  +  HSEKL
Sbjct: 499 HEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKL 558

Query: 592 AIAFGLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSC 646
           AI +GLI TKPGT ++I+KNLRVC DCH V K+IS+I  R IVMRDR RFHHF DG CSC
Sbjct: 559 AITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSC 618

BLAST of CsGy6G027980 vs. NCBI nr
Match: XP_004141894.1 (pentatricopeptide repeat-containing protein ELI1, chloroplastic [Cucumis sativus])

HSP 1 Score: 1293 bits (3345), Expect = 0.0
Identity = 645/645 (100.00%), Postives = 645/645 (100.00%), Query Frame = 0

Query: 1   MNTQTMSSSSIFTASHPSPPSIFTTNRSSVLPSSSSTARTSDRFQEVERFASLIDKSKSV 60
           MNTQTMSSSSIFTASHPSPPSIFTTNRSSVLPSSSSTARTSDRFQEVERFASLIDKSKSV
Sbjct: 1   MNTQTMSSSSIFTASHPSPPSIFTTNRSSVLPSSSSTARTSDRFQEVERFASLIDKSKSV 60

Query: 61  AHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSH 120
           AHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSH
Sbjct: 61  AHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSH 120

Query: 121 VQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRT 180
           VQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRT
Sbjct: 121 VQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRT 180

Query: 181 GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVC 240
           GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVC
Sbjct: 181 GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVC 240

Query: 241 WNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIE 300
           WNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIE
Sbjct: 241 WNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIE 300

Query: 301 NKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQ 360
           NKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQ
Sbjct: 301 NKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQ 360

Query: 361 LFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLL 420
           LFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLL
Sbjct: 361 LFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLL 420

Query: 421 GRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYV 480
           GRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYV
Sbjct: 421 GRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYV 480

Query: 481 LLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYV 540
           LLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYV
Sbjct: 481 LLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYV 540

Query: 541 MLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVK 600
           MLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVK
Sbjct: 541 MLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVK 600

Query: 601 NLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
           NLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
Sbjct: 601 NLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645

BLAST of CsGy6G027980 vs. NCBI nr
Match: XP_008440332.1 (PREDICTED: pentatricopeptide repeat-containing protein ELI1, chloroplastic [Cucumis melo])

HSP 1 Score: 1230 bits (3183), Expect = 0.0
Identity = 614/645 (95.19%), Postives = 628/645 (97.36%), Query Frame = 0

Query: 1   MNTQTMSSSSIFTASHPSPPSIFTTNRSSVLPSSSSTARTSDRFQEVERFASLIDKSKSV 60
           MN+QTMSSSS FTAS PSPPSIFTTNRSSV PSSSSTA+TS RFQ+VERFA LIDKSKSV
Sbjct: 1   MNSQTMSSSSFFTASPPSPPSIFTTNRSSVSPSSSSTAKTSGRFQQVERFALLIDKSKSV 60

Query: 61  AHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSH 120
           AHLLQIHASLLR GLYHNPILNFKLQRSYAALGRLDCSV VFNTFDEPNVFSFSAIIHSH
Sbjct: 61  AHLLQIHASLLRHGLYHNPILNFKLQRSYAALGRLDCSVVVFNTFDEPNVFSFSAIIHSH 120

Query: 121 VQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRT 180
           VQSRLFDRAFGYYSQMLS GVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRT
Sbjct: 121 VQSRLFDRAFGYYSQMLSRGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRT 180

Query: 181 GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVC 240
           GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELD+ARSLFEGMKERDVVC
Sbjct: 181 GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDEARSLFEGMKERDVVC 240

Query: 241 WNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIE 300
           WNVMIGGYAQ+GVPNESLKLFRRMLV+KAIPNEVTVLAVLSACGQLGALESGRW+HSYIE
Sbjct: 241 WNVMIGGYAQNGVPNESLKLFRRMLVSKAIPNEVTVLAVLSACGQLGALESGRWVHSYIE 300

Query: 301 NKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQ 360
           NK IQINVHVGTAL+DMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQ
Sbjct: 301 NKSIQINVHVGTALVDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQ 360

Query: 361 LFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLL 420
           LF EMTETGH+PTDITFIGILSAC HGGLVEEGRS FRLMRDKYGIEPKIEHYGCMVNLL
Sbjct: 361 LFGEMTETGHQPTDITFIGILSACAHGGLVEEGRSLFRLMRDKYGIEPKIEHYGCMVNLL 420

Query: 421 GRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYV 480
           GRAGHLEEAY LVKNMTIAADPVLWGTLLG CRLHVNIKLGEEIA+FLVDQKLA+SGTYV
Sbjct: 421 GRAGHLEEAYALVKNMTIAADPVLWGTLLGSCRLHVNIKLGEEIAEFLVDQKLAHSGTYV 480

Query: 481 LLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYV 540
           LLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEV+NKVHEFVAGERKHPKSKEIYV
Sbjct: 481 LLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVNNKVHEFVAGERKHPKSKEIYV 540

Query: 541 MLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVK 600
           M NEINSWLKARGYT QTDVVLHDLREEQKEQ LEVHSEKLAIAFGLISTKPGTT+KIVK
Sbjct: 541 MSNEINSWLKARGYTSQTDVVLHDLREEQKEQLLEVHSEKLAIAFGLISTKPGTTIKIVK 600

Query: 601 NLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
           NLRVCSDCHTVMK+ISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
Sbjct: 601 NLRVCSDCHTVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645

BLAST of CsGy6G027980 vs. NCBI nr
Match: TYK12851.1 (pentatricopeptide repeat-containing protein ELI1 [Cucumis melo var. makuwa])

HSP 1 Score: 1225 bits (3170), Expect = 0.0
Identity = 613/645 (95.04%), Postives = 626/645 (97.05%), Query Frame = 0

Query: 1   MNTQTMSSSSIFTASHPSPPSIFTTNRSSVLPSSSSTARTSDRFQEVERFASLIDKSKSV 60
           MN+QTMSSSS FTAS PSPPSIFTTNR SV PSSSSTARTS RFQ+VERFA LIDKSKSV
Sbjct: 1   MNSQTMSSSSFFTASPPSPPSIFTTNRFSVSPSSSSTARTSGRFQQVERFALLIDKSKSV 60

Query: 61  AHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSH 120
           AHLLQIHASLLR GLYHN ILNFKLQRSYAALGRLDCSV VFNTFDEPNVFSFSAIIHSH
Sbjct: 61  AHLLQIHASLLRHGLYHNLILNFKLQRSYAALGRLDCSVVVFNTFDEPNVFSFSAIIHSH 120

Query: 121 VQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRT 180
           VQSRLFDRAFGYYSQMLS GVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRT
Sbjct: 121 VQSRLFDRAFGYYSQMLSRGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRT 180

Query: 181 GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVC 240
           GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELD+ARSLFEGMKERDVVC
Sbjct: 181 GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDEARSLFEGMKERDVVC 240

Query: 241 WNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIE 300
           WNVMIGGYAQ+GVPNESLKLFRRMLV+KAIPNEVTVLAVLSACGQLGALESGRW+HSYIE
Sbjct: 241 WNVMIGGYAQNGVPNESLKLFRRMLVSKAIPNEVTVLAVLSACGQLGALESGRWVHSYIE 300

Query: 301 NKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQ 360
           NK IQINVHVGTAL+DMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQ ALQ
Sbjct: 301 NKSIQINVHVGTALVDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQRALQ 360

Query: 361 LFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLL 420
           LF EMTETGH+PTDITFIGILSAC HGGLVEEGRS FRLMRDKYGIEPKIEHYGCMVNLL
Sbjct: 361 LFGEMTETGHQPTDITFIGILSACAHGGLVEEGRSLFRLMRDKYGIEPKIEHYGCMVNLL 420

Query: 421 GRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYV 480
           GRAGHLEEAY LVKNMTIAADPVLWGTLLG CRLHVNIKLGEEIA+FLVDQKLA+SGTYV
Sbjct: 421 GRAGHLEEAYALVKNMTIAADPVLWGTLLGSCRLHVNIKLGEEIAEFLVDQKLAHSGTYV 480

Query: 481 LLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYV 540
           LLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEV+NKVHEFVAGERKHPKSKEIYV
Sbjct: 481 LLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVNNKVHEFVAGERKHPKSKEIYV 540

Query: 541 MLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVK 600
           M NEINSWLKARGYTPQTDVVLHDLREEQKEQ LEVHSEKLAIAFGLISTKPGTT+KIVK
Sbjct: 541 MSNEINSWLKARGYTPQTDVVLHDLREEQKEQLLEVHSEKLAIAFGLISTKPGTTIKIVK 600

Query: 601 NLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
           NLRVCSDCHTVMK+ISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
Sbjct: 601 NLRVCSDCHTVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645

BLAST of CsGy6G027980 vs. NCBI nr
Match: XP_038882525.1 (pentatricopeptide repeat-containing protein ELI1, chloroplastic [Benincasa hispida])

HSP 1 Score: 1164 bits (3011), Expect = 0.0
Identity = 579/640 (90.47%), Postives = 605/640 (94.53%), Query Frame = 0

Query: 6   MSSSSIFTASHPSPPSIFTTNRSSVLPSSSSTARTSDRFQEVERFASLIDKSKSVAHLLQ 65
           M SSS  TAS P PP IFTTNRSSVLPSSSSTARTSD FQ+VERFA LIDKSKS+  LLQ
Sbjct: 1   MPSSSFLTASPPPPPPIFTTNRSSVLPSSSSTARTSDPFQQVERFALLIDKSKSIPRLLQ 60

Query: 66  IHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRL 125
           IHASLLR  LYHNPILNFKLQRSYAALGRLD SV VFNT DEPNVFSFSAIIHSHVQ RL
Sbjct: 61  IHASLLRHRLYHNPILNFKLQRSYAALGRLDYSVAVFNTSDEPNVFSFSAIIHSHVQCRL 120

Query: 126 FDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVDV 185
           FD+A GYYSQML+ GVEPN FTFSSVLKSCSLE GKVLHCQAIKLG  SDLYVRTGLVDV
Sbjct: 121 FDQALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDLYVRTGLVDV 180

Query: 186 YARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMI 245
           YARGGDVVCARQLFDKMPERSLVSLT MLTCY+K+GELD+AR+LF+GMKERDVVCWNVMI
Sbjct: 181 YARGGDVVCARQLFDKMPERSLVSLTAMLTCYAKLGELDEARALFDGMKERDVVCWNVMI 240

Query: 246 GGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQ 305
           GGYAQ+G+PNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRW+HSYIEN+GIQ
Sbjct: 241 GGYAQNGLPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWVHSYIENEGIQ 300

Query: 306 INVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEM 365
           INVHVGTAL+DMYSKCGSLEDARL+FD IRDKDVVAWNSMIVGYA+HGFSQHALQLFEEM
Sbjct: 301 INVHVGTALVDMYSKCGSLEDARLIFDGIRDKDVVAWNSMIVGYALHGFSQHALQLFEEM 360

Query: 366 TETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGH 425
           TETG++PTDITFIGILSAC HGGLVEEGRSFFRLMRDKYGIEPK+EHYGCMVNLLGRAGH
Sbjct: 361 TETGYRPTDITFIGILSACSHGGLVEEGRSFFRLMRDKYGIEPKVEHYGCMVNLLGRAGH 420

Query: 426 LEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNM 485
           LEEAY LVKNMTIAADPVLWGTLLG CRLH NIKLGEEIA+FLVDQ+LANSGTYVLLSN 
Sbjct: 421 LEEAYELVKNMTIAADPVLWGTLLGSCRLHGNIKLGEEIAEFLVDQRLANSGTYVLLSNT 480

Query: 486 YAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEI 545
           YAATGNWEGVAKMRTLMKEHGIEKE GCSSIEV+NKVHEFVAGERKHPKSKEIY+MLNEI
Sbjct: 481 YAATGNWEGVAKMRTLMKEHGIEKEPGCSSIEVNNKVHEFVAGERKHPKSKEIYMMLNEI 540

Query: 546 NSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVC 605
           N WLKAR YTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLIST+PGTT+KIVKNLRVC
Sbjct: 541 NGWLKARRYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVC 600

Query: 606 SDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
            DCH VMK+ISEIT RKIVMRDRNRFHHFEDGLCSCGDYW
Sbjct: 601 LDCHAVMKLISEITKRKIVMRDRNRFHHFEDGLCSCGDYW 640

BLAST of CsGy6G027980 vs. NCBI nr
Match: XP_022950238.1 (pentatricopeptide repeat-containing protein ELI1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1122 bits (2901), Expect = 0.0
Identity = 559/637 (87.76%), Postives = 592/637 (92.94%), Query Frame = 0

Query: 9   SSIFTASHPSPPSIFTTNRSSVLPSSSSTARTSDRFQEVERFASLIDKSKSVAHLLQIHA 68
           SS  TAS  SPP IFTTN SSVL SS STARTSDRFQ+VE FA LIDKSKSV  LLQIHA
Sbjct: 3   SSFLTASPASPPPIFTTNCSSVLRSSCSTARTSDRFQQVESFAMLIDKSKSVDRLLQIHA 62

Query: 69  SLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDR 128
           S+LR GLYHNPILNFKLQRSYAALGRLD SV VFNT DEPNVFSFSAIIHSHVQ  LFDR
Sbjct: 63  SVLRHGLYHNPILNFKLQRSYAALGRLDYSVAVFNTSDEPNVFSFSAIIHSHVQCGLFDR 122

Query: 129 AFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVDVYAR 188
           A  YY QML+ GVEPN FTFSSVLKSCSLE GKVLHCQAIKLG  SDLYVRTGLVDVYAR
Sbjct: 123 ALDYYLQMLNGGVEPNVFTFSSVLKSCSLELGKVLHCQAIKLGFDSDLYVRTGLVDVYAR 182

Query: 189 GGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGY 248
           GGDVVCARQLFDKM ERSLVSLT MLTCY K+GEL +AR+LF+GMKERDVVCWNVMIGGY
Sbjct: 183 GGDVVCARQLFDKMSERSLVSLTAMLTCYVKLGELGEARTLFDGMKERDVVCWNVMIGGY 242

Query: 249 AQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINV 308
           AQ+GVPNESLKLFRRML+AK +PNEVTVLAVLSACGQLGALESGRW+HSYIENKGIQ+NV
Sbjct: 243 AQNGVPNESLKLFRRMLMAKVMPNEVTVLAVLSACGQLGALESGRWVHSYIENKGIQMNV 302

Query: 309 HVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTET 368
           HVGTAL+DMYSKCGSLEDARLVFD+IRDKDVVAWNSMIVGYAMHGFSQ ALQLFEEM+E 
Sbjct: 303 HVGTALVDMYSKCGSLEDARLVFDQIRDKDVVAWNSMIVGYAMHGFSQDALQLFEEMSEI 362

Query: 369 GHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEE 428
           G++PTDITFIGILSAC HGGLVEEGRS+FRLMRDKY IEPK+EHYGC+VNLLGRAGHLEE
Sbjct: 363 GYQPTDITFIGILSACSHGGLVEEGRSYFRLMRDKYRIEPKVEHYGCIVNLLGRAGHLEE 422

Query: 429 AYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAA 488
           AY LVKNM +AADPV+WGTLLG CRLH NIKLGEEIA+FLVDQKLANSGTYVLLSN+YAA
Sbjct: 423 AYELVKNMRVAADPVIWGTLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYAA 482

Query: 489 TGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSW 548
           TGNWEGV+KMRTLMKEHGIEKE GCSSIEV+NKVHEF+AGERKHPKSKEIYVMLNEINSW
Sbjct: 483 TGNWEGVSKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINSW 542

Query: 549 LKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVCSDC 608
           LKA  YTPQTDVVLHDL EEQKE+SLEVHSEKLA+AFGLIST+PGTT+KIVKNLRVCSDC
Sbjct: 543 LKAHRYTPQTDVVLHDLGEEQKERSLEVHSEKLAVAFGLISTQPGTTIKIVKNLRVCSDC 602

Query: 609 HTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
           H VMK+IS+ITGRKIVMRDRNRFHHFEDGLCSCG YW
Sbjct: 603 HAVMKLISKITGRKIVMRDRNRFHHFEDGLCSCGGYW 639

BLAST of CsGy6G027980 vs. ExPASy TrEMBL
Match: A0A0A0KGF1 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G492280 PE=3 SV=1)

HSP 1 Score: 1293 bits (3345), Expect = 0.0
Identity = 645/645 (100.00%), Postives = 645/645 (100.00%), Query Frame = 0

Query: 1   MNTQTMSSSSIFTASHPSPPSIFTTNRSSVLPSSSSTARTSDRFQEVERFASLIDKSKSV 60
           MNTQTMSSSSIFTASHPSPPSIFTTNRSSVLPSSSSTARTSDRFQEVERFASLIDKSKSV
Sbjct: 1   MNTQTMSSSSIFTASHPSPPSIFTTNRSSVLPSSSSTARTSDRFQEVERFASLIDKSKSV 60

Query: 61  AHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSH 120
           AHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSH
Sbjct: 61  AHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSH 120

Query: 121 VQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRT 180
           VQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRT
Sbjct: 121 VQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRT 180

Query: 181 GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVC 240
           GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVC
Sbjct: 181 GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVC 240

Query: 241 WNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIE 300
           WNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIE
Sbjct: 241 WNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIE 300

Query: 301 NKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQ 360
           NKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQ
Sbjct: 301 NKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQ 360

Query: 361 LFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLL 420
           LFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLL
Sbjct: 361 LFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLL 420

Query: 421 GRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYV 480
           GRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYV
Sbjct: 421 GRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYV 480

Query: 481 LLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYV 540
           LLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYV
Sbjct: 481 LLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYV 540

Query: 541 MLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVK 600
           MLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVK
Sbjct: 541 MLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVK 600

Query: 601 NLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
           NLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
Sbjct: 601 NLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645

BLAST of CsGy6G027980 vs. ExPASy TrEMBL
Match: A0A1S3B0U7 (pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484813 PE=3 SV=1)

HSP 1 Score: 1230 bits (3183), Expect = 0.0
Identity = 614/645 (95.19%), Postives = 628/645 (97.36%), Query Frame = 0

Query: 1   MNTQTMSSSSIFTASHPSPPSIFTTNRSSVLPSSSSTARTSDRFQEVERFASLIDKSKSV 60
           MN+QTMSSSS FTAS PSPPSIFTTNRSSV PSSSSTA+TS RFQ+VERFA LIDKSKSV
Sbjct: 1   MNSQTMSSSSFFTASPPSPPSIFTTNRSSVSPSSSSTAKTSGRFQQVERFALLIDKSKSV 60

Query: 61  AHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSH 120
           AHLLQIHASLLR GLYHNPILNFKLQRSYAALGRLDCSV VFNTFDEPNVFSFSAIIHSH
Sbjct: 61  AHLLQIHASLLRHGLYHNPILNFKLQRSYAALGRLDCSVVVFNTFDEPNVFSFSAIIHSH 120

Query: 121 VQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRT 180
           VQSRLFDRAFGYYSQMLS GVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRT
Sbjct: 121 VQSRLFDRAFGYYSQMLSRGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRT 180

Query: 181 GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVC 240
           GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELD+ARSLFEGMKERDVVC
Sbjct: 181 GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDEARSLFEGMKERDVVC 240

Query: 241 WNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIE 300
           WNVMIGGYAQ+GVPNESLKLFRRMLV+KAIPNEVTVLAVLSACGQLGALESGRW+HSYIE
Sbjct: 241 WNVMIGGYAQNGVPNESLKLFRRMLVSKAIPNEVTVLAVLSACGQLGALESGRWVHSYIE 300

Query: 301 NKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQ 360
           NK IQINVHVGTAL+DMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQ
Sbjct: 301 NKSIQINVHVGTALVDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQ 360

Query: 361 LFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLL 420
           LF EMTETGH+PTDITFIGILSAC HGGLVEEGRS FRLMRDKYGIEPKIEHYGCMVNLL
Sbjct: 361 LFGEMTETGHQPTDITFIGILSACAHGGLVEEGRSLFRLMRDKYGIEPKIEHYGCMVNLL 420

Query: 421 GRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYV 480
           GRAGHLEEAY LVKNMTIAADPVLWGTLLG CRLHVNIKLGEEIA+FLVDQKLA+SGTYV
Sbjct: 421 GRAGHLEEAYALVKNMTIAADPVLWGTLLGSCRLHVNIKLGEEIAEFLVDQKLAHSGTYV 480

Query: 481 LLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYV 540
           LLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEV+NKVHEFVAGERKHPKSKEIYV
Sbjct: 481 LLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVNNKVHEFVAGERKHPKSKEIYV 540

Query: 541 MLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVK 600
           M NEINSWLKARGYT QTDVVLHDLREEQKEQ LEVHSEKLAIAFGLISTKPGTT+KIVK
Sbjct: 541 MSNEINSWLKARGYTSQTDVVLHDLREEQKEQLLEVHSEKLAIAFGLISTKPGTTIKIVK 600

Query: 601 NLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
           NLRVCSDCHTVMK+ISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
Sbjct: 601 NLRVCSDCHTVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645

BLAST of CsGy6G027980 vs. ExPASy TrEMBL
Match: A0A5D3CM09 (Pentatricopeptide repeat-containing protein ELI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004430 PE=3 SV=1)

HSP 1 Score: 1225 bits (3170), Expect = 0.0
Identity = 613/645 (95.04%), Postives = 626/645 (97.05%), Query Frame = 0

Query: 1   MNTQTMSSSSIFTASHPSPPSIFTTNRSSVLPSSSSTARTSDRFQEVERFASLIDKSKSV 60
           MN+QTMSSSS FTAS PSPPSIFTTNR SV PSSSSTARTS RFQ+VERFA LIDKSKSV
Sbjct: 1   MNSQTMSSSSFFTASPPSPPSIFTTNRFSVSPSSSSTARTSGRFQQVERFALLIDKSKSV 60

Query: 61  AHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSH 120
           AHLLQIHASLLR GLYHN ILNFKLQRSYAALGRLDCSV VFNTFDEPNVFSFSAIIHSH
Sbjct: 61  AHLLQIHASLLRHGLYHNLILNFKLQRSYAALGRLDCSVVVFNTFDEPNVFSFSAIIHSH 120

Query: 121 VQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRT 180
           VQSRLFDRAFGYYSQMLS GVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRT
Sbjct: 121 VQSRLFDRAFGYYSQMLSRGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRT 180

Query: 181 GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVC 240
           GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELD+ARSLFEGMKERDVVC
Sbjct: 181 GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDEARSLFEGMKERDVVC 240

Query: 241 WNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIE 300
           WNVMIGGYAQ+GVPNESLKLFRRMLV+KAIPNEVTVLAVLSACGQLGALESGRW+HSYIE
Sbjct: 241 WNVMIGGYAQNGVPNESLKLFRRMLVSKAIPNEVTVLAVLSACGQLGALESGRWVHSYIE 300

Query: 301 NKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQ 360
           NK IQINVHVGTAL+DMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQ ALQ
Sbjct: 301 NKSIQINVHVGTALVDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQRALQ 360

Query: 361 LFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLL 420
           LF EMTETGH+PTDITFIGILSAC HGGLVEEGRS FRLMRDKYGIEPKIEHYGCMVNLL
Sbjct: 361 LFGEMTETGHQPTDITFIGILSACAHGGLVEEGRSLFRLMRDKYGIEPKIEHYGCMVNLL 420

Query: 421 GRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYV 480
           GRAGHLEEAY LVKNMTIAADPVLWGTLLG CRLHVNIKLGEEIA+FLVDQKLA+SGTYV
Sbjct: 421 GRAGHLEEAYALVKNMTIAADPVLWGTLLGSCRLHVNIKLGEEIAEFLVDQKLAHSGTYV 480

Query: 481 LLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYV 540
           LLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEV+NKVHEFVAGERKHPKSKEIYV
Sbjct: 481 LLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVNNKVHEFVAGERKHPKSKEIYV 540

Query: 541 MLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVK 600
           M NEINSWLKARGYTPQTDVVLHDLREEQKEQ LEVHSEKLAIAFGLISTKPGTT+KIVK
Sbjct: 541 MSNEINSWLKARGYTPQTDVVLHDLREEQKEQLLEVHSEKLAIAFGLISTKPGTTIKIVK 600

Query: 601 NLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
           NLRVCSDCHTVMK+ISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
Sbjct: 601 NLRVCSDCHTVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645

BLAST of CsGy6G027980 vs. ExPASy TrEMBL
Match: A0A6J1GED1 (pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111453386 PE=3 SV=1)

HSP 1 Score: 1122 bits (2901), Expect = 0.0
Identity = 559/637 (87.76%), Postives = 592/637 (92.94%), Query Frame = 0

Query: 9   SSIFTASHPSPPSIFTTNRSSVLPSSSSTARTSDRFQEVERFASLIDKSKSVAHLLQIHA 68
           SS  TAS  SPP IFTTN SSVL SS STARTSDRFQ+VE FA LIDKSKSV  LLQIHA
Sbjct: 3   SSFLTASPASPPPIFTTNCSSVLRSSCSTARTSDRFQQVESFAMLIDKSKSVDRLLQIHA 62

Query: 69  SLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDR 128
           S+LR GLYHNPILNFKLQRSYAALGRLD SV VFNT DEPNVFSFSAIIHSHVQ  LFDR
Sbjct: 63  SVLRHGLYHNPILNFKLQRSYAALGRLDYSVAVFNTSDEPNVFSFSAIIHSHVQCGLFDR 122

Query: 129 AFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVDVYAR 188
           A  YY QML+ GVEPN FTFSSVLKSCSLE GKVLHCQAIKLG  SDLYVRTGLVDVYAR
Sbjct: 123 ALDYYLQMLNGGVEPNVFTFSSVLKSCSLELGKVLHCQAIKLGFDSDLYVRTGLVDVYAR 182

Query: 189 GGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGY 248
           GGDVVCARQLFDKM ERSLVSLT MLTCY K+GEL +AR+LF+GMKERDVVCWNVMIGGY
Sbjct: 183 GGDVVCARQLFDKMSERSLVSLTAMLTCYVKLGELGEARTLFDGMKERDVVCWNVMIGGY 242

Query: 249 AQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINV 308
           AQ+GVPNESLKLFRRML+AK +PNEVTVLAVLSACGQLGALESGRW+HSYIENKGIQ+NV
Sbjct: 243 AQNGVPNESLKLFRRMLMAKVMPNEVTVLAVLSACGQLGALESGRWVHSYIENKGIQMNV 302

Query: 309 HVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTET 368
           HVGTAL+DMYSKCGSLEDARLVFD+IRDKDVVAWNSMIVGYAMHGFSQ ALQLFEEM+E 
Sbjct: 303 HVGTALVDMYSKCGSLEDARLVFDQIRDKDVVAWNSMIVGYAMHGFSQDALQLFEEMSEI 362

Query: 369 GHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEE 428
           G++PTDITFIGILSAC HGGLVEEGRS+FRLMRDKY IEPK+EHYGC+VNLLGRAGHLEE
Sbjct: 363 GYQPTDITFIGILSACSHGGLVEEGRSYFRLMRDKYRIEPKVEHYGCIVNLLGRAGHLEE 422

Query: 429 AYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAA 488
           AY LVKNM +AADPV+WGTLLG CRLH NIKLGEEIA+FLVDQKLANSGTYVLLSN+YAA
Sbjct: 423 AYELVKNMRVAADPVIWGTLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNIYAA 482

Query: 489 TGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSW 548
           TGNWEGV+KMRTLMKEHGIEKE GCSSIEV+NKVHEF+AGERKHPKSKEIYVMLNEINSW
Sbjct: 483 TGNWEGVSKMRTLMKEHGIEKEPGCSSIEVNNKVHEFLAGERKHPKSKEIYVMLNEINSW 542

Query: 549 LKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVCSDC 608
           LKA  YTPQTDVVLHDL EEQKE+SLEVHSEKLA+AFGLIST+PGTT+KIVKNLRVCSDC
Sbjct: 543 LKAHRYTPQTDVVLHDLGEEQKERSLEVHSEKLAVAFGLISTQPGTTIKIVKNLRVCSDC 602

Query: 609 HTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
           H VMK+IS+ITGRKIVMRDRNRFHHFEDGLCSCG YW
Sbjct: 603 HAVMKLISKITGRKIVMRDRNRFHHFEDGLCSCGGYW 639

BLAST of CsGy6G027980 vs. ExPASy TrEMBL
Match: A0A6J1BWF5 (pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005343 PE=3 SV=1)

HSP 1 Score: 1118 bits (2892), Expect = 0.0
Identity = 551/640 (86.09%), Postives = 592/640 (92.50%), Query Frame = 0

Query: 6   MSSSSIFTASHPSPPSIFTTNRSSVLPSSSSTARTSDRFQEVERFASLIDKSKSVAHLLQ 65
           MSSSS FTA  PSPP + TTNRSS+LPSS STA TSDR Q+VERFASLIDKS+SV  LLQ
Sbjct: 1   MSSSSFFTAPPPSPPPLVTTNRSSLLPSSPSTATTSDRSQQVERFASLIDKSRSVIRLLQ 60

Query: 66  IHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRL 125
           IHASLLR+GLYH+PILNFKLQRSYA +GRLD SV VFNT D+PNVFS+S+IIHSH Q  L
Sbjct: 61  IHASLLRQGLYHHPILNFKLQRSYATVGRLDYSVAVFNTSDDPNVFSYSSIIHSHAQCGL 120

Query: 126 FDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVDV 185
           FD+A  +YSQML+ GVEPN FTFSSVLKSCSLE GK LHCQAIKLG  SDLYVRTGLVDV
Sbjct: 121 FDQALDFYSQMLTRGVEPNVFTFSSVLKSCSLEPGKALHCQAIKLGFDSDLYVRTGLVDV 180

Query: 186 YARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMI 245
           YARGG+VVCARQLFDKMPERSLVSLT MLTCY+K+GELD+AR+LF+GMKERDVVCWNVMI
Sbjct: 181 YARGGEVVCARQLFDKMPERSLVSLTAMLTCYTKLGELDEARALFDGMKERDVVCWNVMI 240

Query: 246 GGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQ 305
           GGYAQ+GVPNESLKLFRRMLVAK  PNEVTVLAVLSACGQLGALESGRW+HSYIENKGI+
Sbjct: 241 GGYAQNGVPNESLKLFRRMLVAKVKPNEVTVLAVLSACGQLGALESGRWVHSYIENKGIE 300

Query: 306 INVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEM 365
           +NVHVGTAL+DMYSKCGSLEDARLVFD IRDKDVVAWNSMIVGYAMHGF QH LQLFEEM
Sbjct: 301 MNVHVGTALVDMYSKCGSLEDARLVFDGIRDKDVVAWNSMIVGYAMHGFFQHVLQLFEEM 360

Query: 366 TETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGH 425
           T  G++PTDITFIGILSAC HGG+VEEGR F  LMR +YGIEPK+EHYGCMVNLLG AGH
Sbjct: 361 TAIGYQPTDITFIGILSACSHGGMVEEGRRFLSLMRKEYGIEPKVEHYGCMVNLLGHAGH 420

Query: 426 LEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNM 485
           LEEAY LVKNMT+AADPVLWGTLLG CRLH NIKLGEEIA+FLVDQKLANSGTYVLLSN+
Sbjct: 421 LEEAYNLVKNMTVAADPVLWGTLLGSCRLHGNIKLGEEIAEFLVDQKLANSGTYVLLSNI 480

Query: 486 YAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEI 545
           YAATGNWEGVAK+RTLMKEHGIEKE GCSSIEV+NKVHEFVAGERKHPK+KEIY+MLNEI
Sbjct: 481 YAATGNWEGVAKIRTLMKEHGIEKEPGCSSIEVNNKVHEFVAGERKHPKTKEIYMMLNEI 540

Query: 546 NSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVC 605
           N WL+A GY PQTD+VLHDL EEQKEQSLEVHSEKLAIAFGLIST+PGTTVKIVKNLRVC
Sbjct: 541 NRWLRAHGYAPQTDIVLHDLGEEQKEQSLEVHSEKLAIAFGLISTQPGTTVKIVKNLRVC 600

Query: 606 SDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
           SDCH VMK+IS+ITGRKIVMRDRNRFHHFEDGLCSCGDYW
Sbjct: 601 SDCHAVMKLISKITGRKIVMRDRNRFHHFEDGLCSCGDYW 640

BLAST of CsGy6G027980 vs. TAIR 10
Match: AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 754.2 bits (1946), Expect = 8.6e-218
Identity = 370/616 (60.06%), Postives = 474/616 (76.95%), Query Frame = 0

Query: 35  SSTARTSDRFQEVERFASLIDKSKSVAHLLQIHASLLRRGLY---HNPILNFKLQRSYAA 94
           S+TA    R    E+ A LIDKS+SV  +LQIHA++LR  L      P+LN KL R+YA+
Sbjct: 17  STTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYAS 76

Query: 95  LGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSV 154
            G++  S+ +F+   +P++F F+A I++   + L D+AF  Y Q+LS  + PN FTFSS+
Sbjct: 77  HGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSL 136

Query: 155 LKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLT 214
           LKSCS +SGK++H   +K GLG D YV TGLVDVYA+GGDVV A+++FD+MPERSLVS T
Sbjct: 137 LKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSST 196

Query: 215 TMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLV-AKAI 274
            M+TCY+K G ++ AR+LF+ M ERD+V WNVMI GYAQ G PN++L LF+++L   K  
Sbjct: 197 AMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPK 256

Query: 275 PNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLV 334
           P+E+TV+A LSAC Q+GALE+GRWIH ++++  I++NV V T LIDMYSKCGSLE+A LV
Sbjct: 257 PDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLV 316

Query: 335 FDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTE-TGHKPTDITFIGILSACGHGGL 394
           F+    KD+VAWN+MI GYAMHG+SQ AL+LF EM   TG +PTDITFIG L AC H GL
Sbjct: 317 FNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGL 376

Query: 395 VEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLL 454
           V EG   F  M  +YGI+PKIEHYGC+V+LLGRAG L+ AY  +KNM + AD VLW ++L
Sbjct: 377 VNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVL 436

Query: 455 GCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEK 514
           G C+LH +  LG+EIA++L+   + NSG YVLLSN+YA+ G++EGVAK+R LMKE GI K
Sbjct: 437 GSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVK 496

Query: 515 EHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQ 574
           E G S+IE++NKVHEF AG+R+H KSKEIY ML +I+  +K+ GY P T+ VL DL E +
Sbjct: 497 EPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETE 556

Query: 575 KEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRDRN 634
           KEQSL+VHSE+LAIA+GLISTKPG+ +KI KNLRVCSDCHTV K+IS+ITGRKIVMRDRN
Sbjct: 557 KEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRN 616

Query: 635 RFHHFEDGLCSCGDYW 646
           RFHHF DG CSCGD+W
Sbjct: 617 RFHHFTDGSCSCGDFW 632

BLAST of CsGy6G027980 vs. TAIR 10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 528.1 bits (1359), Expect = 1.0e-149
Identity = 278/639 (43.51%), Postives = 397/639 (62.13%), Query Frame = 0

Query: 32  PSSSSTARTSDRFQEVERFASLIDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAA 91
           P+SS  +  S  F +       I+  +++  L QIHA  ++ G   + +   ++ R  A 
Sbjct: 15  PASSPASHPSSLFPQ-------INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCAT 74

Query: 92  LG----RLDCSVFVFNTFDEPNVFSFSAIIHSHVQS---RLFDRAFGYYSQMLSCGVEPN 151
                  LD +  +FN   + N FS++ II    +S   +       +Y  M    VEPN
Sbjct: 75  SDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPN 134

Query: 152 AFTFSSVLKSCS----LESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFD 211
            FTF SVLK+C+    ++ GK +H  A+K G G D +V + LV +Y   G +  AR LF 
Sbjct: 135 RFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFY 194

Query: 212 K-MPERSLVSLT-------------TMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIG 271
           K + E+ +V +T              M+  Y ++G+   AR LF+ M++R VV WN MI 
Sbjct: 195 KNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMIS 254

Query: 272 GYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQI 331
           GY+ +G   +++++FR M      PN VT+++VL A  +LG+LE G W+H Y E+ GI+I
Sbjct: 255 GYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRI 314

Query: 332 NVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMT 391
           +  +G+ALIDMYSKCG +E A  VF+R+  ++V+ W++MI G+A+HG +  A+  F +M 
Sbjct: 315 DDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMR 374

Query: 392 ETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHL 451
           + G +P+D+ +I +L+AC HGGLVEEGR +F  M    G+EP+IEHYGCMV+LLGR+G L
Sbjct: 375 QAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLL 434

Query: 452 EEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMY 511
           +EA   + NM I  D V+W  LLG CR+  N+++G+ +A  L+D    +SG YV LSNMY
Sbjct: 435 DEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMY 494

Query: 512 AATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEIN 571
           A+ GNW  V++MR  MKE  I K+ GCS I++D  +HEFV  +  HPK+KEI  ML EI+
Sbjct: 495 ASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEIS 554

Query: 572 SWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVCS 631
             L+  GY P T  VL +L EE KE  L  HSEK+A AFGLIST PG  ++IVKNLR+C 
Sbjct: 555 DKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICE 614

Query: 632 DCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 646
           DCH+ +K+IS++  RKI +RDR RFHHF+DG CSC DYW
Sbjct: 615 DCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646

BLAST of CsGy6G027980 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 514.6 bits (1324), Expect = 1.1e-145
Identity = 285/728 (39.15%), Postives = 400/728 (54.95%), Query Frame = 0

Query: 31  LPSSSSTARTSDRFQEVERFASLIDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQR--S 90
           LPSSS     S R        SL+   K++  L  IHA +++ GL++    N+ L +   
Sbjct: 20  LPSSSDPPYDSIRNHP---SLSLLHNCKTLQSLRIIHAQMIKIGLHNT---NYALSKLIE 79

Query: 91  YAALG----RLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPN 150
           +  L      L  ++ VF T  EPN+  ++ +   H  S     A   Y  M+S G+ PN
Sbjct: 80  FCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPN 139

Query: 151 AFTFSSVLKSC----SLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFD 210
           ++TF  VLKSC    + + G+ +H   +KLG   DLYV T L+ +Y + G +  A ++FD
Sbjct: 140 SYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD 199

Query: 211 KMPERSLVSLT------------------------------------------------- 270
           K P R +VS T                                                 
Sbjct: 200 KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 259

Query: 271 --------------TMLT--------------------------------------CYSK 330
                         TM+T                                       YSK
Sbjct: 260 FKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSK 319

Query: 331 MGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAV 390
            GEL+ A  LFE +  +DV+ WN +IGGY    +  E+L LF+ ML +   PN+VT+L++
Sbjct: 320 CGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 379

Query: 391 LSACGQLGALESGRWIHSYIEN--KGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDK 450
           L AC  LGA++ GRWIH YI+   KG+     + T+LIDMY+KCG +E A  VF+ I  K
Sbjct: 380 LPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 439

Query: 451 DVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFF 510
            + +WN+MI G+AMHG +  +  LF  M + G +P DITF+G+LSAC H G+++ GR  F
Sbjct: 440 SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIF 499

Query: 511 RLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVN 570
           R M   Y + PK+EHYGCM++LLG +G  +EA  ++  M +  D V+W +LL  C++H N
Sbjct: 500 RTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGN 559

Query: 571 IKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIE 630
           ++LGE  A+ L+  +  N G+YVLLSN+YA+ G W  VAK R L+ + G++K  GCSSIE
Sbjct: 560 VELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIE 619

Query: 631 VDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVH 646
           +D+ VHEF+ G++ HP+++EIY ML E+   L+  G+ P T  VL ++ EE KE +L  H
Sbjct: 620 IDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHH 679

BLAST of CsGy6G027980 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 505.8 bits (1301), Expect = 5.3e-143
Identity = 249/605 (41.16%), Postives = 378/605 (62.48%), Query Frame = 0

Query: 50  FASLIDKSKSVAHL---LQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFD 109
           F  LI  +  V+ L     +H   ++  +  +  +   L   Y + G LD +  VF T  
Sbjct: 134 FPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK 193

Query: 110 EPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSC----SLESGKV 169
           E +V S++++I+  VQ    D+A   + +M S  V+ +  T   VL +C    +LE G+ 
Sbjct: 194 EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQ 253

Query: 170 LHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGE 229
           +     +  +  +L +   ++D+Y + G +  A++LFD M E+  V+ TTML  Y+   +
Sbjct: 254 VCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 313

Query: 230 LDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIP-NEVTVLAVLS 289
            + AR +   M ++D+V WN +I  Y Q+G PNE+L +F  + + K +  N++T+++ LS
Sbjct: 314 YEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLS 373

Query: 290 ACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVA 349
           AC Q+GALE GRWIHSYI+  GI++N HV +ALI MYSKCG LE +R VF+ +  +DV  
Sbjct: 374 ACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFV 433

Query: 350 WNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMR 409
           W++MI G AMHG    A+ +F +M E   KP  +TF  +  AC H GLV+E  S F  M 
Sbjct: 434 WSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 493

Query: 410 DKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLG 469
             YGI P+ +HY C+V++LGR+G+LE+A   ++ M I     +WG LLG C++H N+ L 
Sbjct: 494 SNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLA 553

Query: 470 EEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNK 529
           E     L++ +  N G +VLLSN+YA  G WE V+++R  M+  G++KE GCSSIE+D  
Sbjct: 554 EMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGM 613

Query: 530 VHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQ-KEQSLEVHSEK 589
           +HEF++G+  HP S+++Y  L+E+   LK+ GY P+   VL  + EE+ KEQSL +HSEK
Sbjct: 614 IHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEK 673

Query: 590 LAIAFGLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCS 646
           LAI +GLIST+    ++++KNLRVC DCH+V K+IS++  R+I++RDR RFHHF +G CS
Sbjct: 674 LAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCS 733

BLAST of CsGy6G027980 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 504.2 bits (1297), Expect = 1.5e-142
Identity = 259/604 (42.88%), Postives = 368/604 (60.93%), Query Frame = 0

Query: 52  SLIDKSKSVAHLLQIHASLLRRGLYHN-----PILNFKLQRSYAALGRLDCSVFVFNTFD 111
           S + +      L QIHA +L+ GL  +       L+F +  S  +   L  +  VF+ FD
Sbjct: 19  SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCI--SSTSSDFLPYAQIVFDGFD 78

Query: 112 EPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKV 171
            P+ F ++ +I     S   +R+   Y +ML      NA+TF S+LK+CS     E    
Sbjct: 79  RPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQ 138

Query: 172 LHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGE 231
           +H Q  KLG  +D+Y    L++ YA  G+   A  LFD++PE   VS  +++  Y K G+
Sbjct: 139 IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGK 198

Query: 232 LDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSA 291
           +D A +LF  M E++ + W  MI GY Q+ +  E+L+LF  M  +   P+ V++   LSA
Sbjct: 199 MDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSA 258

Query: 292 CGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAW 351
           C QLGALE G+WIHSY+    I+++  +G  LIDMY+KCG +E+A  VF  I+ K V AW
Sbjct: 259 CAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAW 318

Query: 352 NSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRD 411
            ++I GYA HG  + A+  F EM + G KP  ITF  +L+AC + GLVEEG+  F  M  
Sbjct: 319 TALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMER 378

Query: 412 KYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGE 471
            Y ++P IEHYGC+V+LLGRAG L+EA   ++ M +  + V+WG LL  CR+H NI+LGE
Sbjct: 379 DYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGE 438

Query: 472 EIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKV 531
           EI + L+     + G YV  +N++A    W+  A+ R LMKE G+ K  GCS+I ++   
Sbjct: 439 EIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTT 498

Query: 532 HEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDL-REEQKEQSLEVHSEKL 591
           HEF+AG+R HP+ ++I      +   L+  GY P+ + +L DL  ++++E  +  HSEKL
Sbjct: 499 HEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKL 558

Query: 592 AIAFGLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSC 646
           AI +GLI TKPGT ++I+KNLRVC DCH V K+IS+I  R IVMRDR RFHHF DG CSC
Sbjct: 559 AITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSC 618

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SZT81.2e-21660.06Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t... [more]
Q9FI801.4e-14843.51Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... [more]
Q9LN011.6e-14439.15Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
O823807.5e-14241.16Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9FJY72.2e-14142.88Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
XP_004141894.10.0100.00pentatricopeptide repeat-containing protein ELI1, chloroplastic [Cucumis sativus... [more]
XP_008440332.10.095.19PREDICTED: pentatricopeptide repeat-containing protein ELI1, chloroplastic [Cucu... [more]
TYK12851.10.095.04pentatricopeptide repeat-containing protein ELI1 [Cucumis melo var. makuwa][more]
XP_038882525.10.090.47pentatricopeptide repeat-containing protein ELI1, chloroplastic [Benincasa hispi... [more]
XP_022950238.10.087.76pentatricopeptide repeat-containing protein ELI1, chloroplastic [Cucurbita mosch... [more]
Match NameE-valueIdentityDescription
A0A0A0KGF10.0100.00DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G4922... [more]
A0A1S3B0U70.095.19pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Cucumis melo ... [more]
A0A5D3CM090.095.04Pentatricopeptide repeat-containing protein ELI1 OS=Cucumis melo var. makuwa OX=... [more]
A0A6J1GED10.087.76pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Cucurbita mos... [more]
A0A6J1BWF50.086.09pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Momordica cha... [more]
Match NameE-valueIdentityDescription
AT4G37380.18.6e-21860.06Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G48910.11.0e-14943.51Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G08070.11.1e-14539.15Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G29760.15.3e-14341.16Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G66520.11.5e-14242.88Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 108..155
e-value: 4.5E-10
score: 39.6
coord: 337..384
e-value: 2.6E-10
score: 40.3
coord: 236..283
e-value: 1.7E-7
score: 31.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 181..205
e-value: 0.064
score: 13.5
coord: 412..436
e-value: 0.034
score: 14.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 312..340
e-value: 0.0016
score: 16.4
coord: 208..239
e-value: 4.9E-7
score: 27.5
coord: 112..145
e-value: 3.7E-6
score: 24.8
coord: 376..408
e-value: 5.6E-4
score: 17.9
coord: 239..272
e-value: 2.0E-5
score: 22.5
coord: 340..373
e-value: 5.8E-7
score: 27.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 237..271
score: 10.98328
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 206..236
score: 9.54735
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 338..372
score: 12.441133
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 109..143
score: 10.270796
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 238..337
e-value: 6.7E-21
score: 77.0
coord: 30..157
e-value: 5.1E-12
score: 47.9
coord: 158..237
e-value: 2.0E-13
score: 52.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 338..579
e-value: 1.0E-32
score: 115.7
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 512..635
e-value: 2.8E-39
score: 133.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR47926PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 35..631
NoneNo IPR availablePANTHERPTHR47926:SF226PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN ELI1, CHLOROPLASTICcoord: 35..631

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G027980.2CsGy6G027980.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding