CsGy6G027740 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G027740
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	U1 small nuclear ribonucleoprotein A isoform X2
Location	Gy14Chr6: 26842976 .. 26849450 (-)
RNA-Seq Expression	CsGy6G027740
Synteny	CsGy6G027740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCGGTCATACCCAACGATCAATTGGAGGAGTCGCAGCCCTTTGCCCAGCAGCCAACCCCACGGCCTCATCTAATAAGAAAGATTATATCCAAAAACAAAATGAAGCAACAACAACATTTTGGAGTTTATTAAAGCCATATGTGTTGTTATCCCATCGGCTAAGGTTAAGGTTGTTAGTTGAAAAACAATACAGTGGACTGAAATTGGGCCATTGGGAATTTGGCGTTTAATTGTGAGCCCATTTGAGTTTTGATGGACAATGGTTTATCACAATTGAAGGAATCCGACCCATAATTCAGGGCTACCAGCTCTCTTTCTCTCTCTCGCTCTCTCTCTCTCGCTACTTGGTCAGAGACTCGGAGGTAACAGCACTCCGATGGACGACATGACGAGCTACTATCCGCCACCGCAACCACCGCCGCAGCCTTCTGGTCTTGAACCTCCTCACTATCCCTATTACCAGGTGCCTCCTCCTCCTTCAGCACCCCCGTCTCAGCATTACCTCTCTCAACACCCGTCCACCTTCGCTTCCTATGCCTTACCTCTTTTACCTCACACAACCTCCATCAATGAGGTCCGTACCCTATTCATAGCTGGTCTTCCTGAAGATGTCAAGCCCCGAGAAATTTACAATCTCTTCCGGGAGTTTCCGGGATACGAGTCCTCTCATCTTCGGACCCCCACGCAGACGACCCAGGTCTTCTATTTTGCAAAATCGTTGTTGTTGGTGTTTTGATTTTTTTTTTTTTAATGGATTTTGTCTTTTTCTTCCGAGTGTGAATTGTTTCTGATTTAGGTGCCTGGGTGCCTACACTTTTTAAAATACGCTTAGCTTAAATTCGTGGGCATTCAGTTGCTTTCGTATCAAAGATGGAGATTAATGTTAGGATTGTACAAACAAAAGTCCCACATGAAGTGATTACAAACAAATACTAAATGATCATGGGTATGAAGTGTGGGCAATTGGGTGGTTCCAAAAGCAAAGCTTTGACAGTTTATGCTGCTATATCATACAATTGTAAAGATAGGTGGAGGTTTGGTTGTCCTTATCAATCAAACTCCGGTTCATAGACAATTCTGGCTAGATACCTGAATCTTTCCGAGTTCTGACTTTTGAAGAAGTTGAAGATGATAATGGTTAAACGAAATTAGCTTGGACCTGGTTTTTTGGGGCATTTACCTGAGATTTTTTCTTTTTTTGGCACCCAAATGTTGTTGTGTTAGCAGGACACGAAGTGTGTGCAACTAGTCCCAGCACTCATGGACATAAACGAAGGAATTTATTTCTCAAAACTTAATTCAACATCCCTTGAAACTCGCCCATGCCCACTGTGAGATTGTTAAATGAACTATAGATGTGCTGTGTCAAATTCTAACGGAATGTCATTATGAATATTGGTACCAATACAGCTGCTTATAGCCTAATACCGATGGCAATGTGAAATCTGATGCATAGTAGACTCCTTTGGCCTACTGAGTTTTAGTGGGATGCAAACATTTTATATTAACAAAATTTTACAAAATTGACATATTGCCATATCTATGGATTCTATCTTTGGCCTATATCCGTATTTGTGCTTCTTATGTTCTCGCTAGCTCAACGTAGGGACATTATCAACACGATCAGCGAGTTCTTCCTTCATCTGTTTTATTGTGAGAAGAGTTGTTTTGTTGGCTTTGTGGGGTGTGCTATTTTGTGGGATCTTTTGGGAGAACAAAATAGCAAAGTGTTTAGTGGGTTGGAGAGGGATCCTAGCAATATTTGGTCGTTTGTGTTAGATTTGGTGTTTCTATTTGGGCTTCGATTTTTAAAGATCATCTATACCTATTTACTTGGGGCACCTTTCTTTAGTGGGTTCCCCCTGTATGCCTTTTTGTTCTTTCATTTAGTTTCAATGAAAGTAGTTGTTATTATTAAAAAAAAATGATGTTTCTTTCTTTTGTTGCATTTAATTGGAAGATAGTGGCTTGTAATAGGACGTATGTGTTTTGTTATCAAGACAACAACCTGAAATATTTTTTTGGCAATGCTTAAACATGATTGCATTGTATTTGTGTTTAGTATCTATGTTTAAGGGTTCTCAAGTTAGGCGATGTACTCTTAGGTTCTGGGAATGGTGGAATTAGTCTCTATATTTTGACCAAGTCAAGATGTATGGAGACGAAGCATAAACTGATATGTTAATATCCCATGTTTTCAACTGCAAATGCTATGTTAATCTGTAGTTTCAAATCCAGTTAATATTGAAAATGAAAGCTTGGGAGCTTTATTGGTATTGGTAAAGGCAATATACCAGCTTTTCATATTTTCCAACCTACAATCTATATTTCTGCAATAAATTGTAGTAAATTTGTGCAAATACTATTCAAATATGTGTACTTTGTGCCTATGACTGTCACTTGAACTTTTAAAAGATTGTAATATTCTTTTTGCACTCTCATGTAATATCTTACGTATACAGCTTACCTATCACCGCTTGTGTTACTTTATTGATTAGTGTTATGTACGAATTTTCTTACAATTTTTTTGGTGTGGTTACAGCCATTTGCATTTGCTGTATTCTCAGACCAGCAGTCTGCCGTTGGTGCAATGCATGCTGTAAATGTAAGTGTGCTTGTTCCTTGCTTCTGTATTCCAAGTTCTTTTGTTAAGAAAATCATTTTGATGATCGAAGGAATTAGATAAAAGGAACTTGGAAGAAAGGCATGATGGGGGTGTGGAGTGAAGTAAGAAGAAAAATAAAGAAGAGAGGTTGCGATGAAAAAGTGATGGAAGAACGACAAGAAGAAGACATTACAATTTAGATTTGTAAGAGAGATGCAGATCTATGATAGGAGGTGGAGGGAAGAGGTTACATCAGTGGATGGGCAGCAACTGAGTGGAGAAAGAGGAAGGGGCCGGAGGGGAGGGGAAAGGGAAGGGCCAAAGGGGGTAGGTAGAGGTCGAGAGAGTTTTTTGTTTATCTCTAAATTATTATTATTATTTTCTTCTTATAATTATTTTTATTATGCCACATCATCTCTGCATTGGAGCTGTTAACCTAGGAACTAAATTGAACTATTTCCTAGCTTTGGGACTTGATTGTTTAATTTTAAAACCTAGGAACTAAATTGAGGCAAACCCTAAGCCTCATGGAGTAATTCATCCTTTTTTTTCTTTAGCATTTTTGCTTTCAATTGCTTGGTTGTTCTTTTGATGCTGCTAATAATAATTGTACCAAGGGGTTAGAGAGTTTTTTGGGTTACCTTCTTGGCAGCTTATAAAATTAGAAATTGCAAGGATGGAGATAAAAAGATTTTTACTATGGGTTAATGTATCACATTGGATTATTTAAACAATTGGTTGCTCTTTGTTGTAGGGCATGGTGTTTGATCTTGAGAAGCAGTCAGTGCTGTATGTTGATTTGGCTAAATCTAATTCAAGATCAAAACGGACGAGGACAGGTACATATCTTGATGGCTCTTCTACTACAAACTTATATTTATATTTTATTTAGTCATATAACCAGTTCGGAATATTTTCTTGATGTGTTCATCAAATGGTTAGAGGAGGAAAGATATGGATCAGATAAGAAAGCTAAAGTCTCTATCATTCCAAGGAGTACTCCTGATCCTGGTAAGATGATTTCCTAGCACTTCTTGTGCTTGTAAGCTATTTCTTATACAAGCTCTTTTGAAAAATAATAATAAAATAAAATAAATTCTCTGTTCTCTTGATGCCCCTTAGGGTATCTATTATTATGCTTATTTTTAATGTATAAATCTGCCCCCTCTGATTTATTTGAGGATGATTATGCGCTGTCTGTACAAACTCCTGGGGTAAGGAGTAATTGATTAGTCACGCAGAGGACACATTATTCTAAAAGCTCATTTTGCACATGTTTTGCACGCTTGGGGCACTAGCAGGTCTTGGCAGCACTCACATGTCTGGAATGGGTAATTCTGCTTACAACACGATTGGTTATCCATCTGCACAAAGGTCATCTGCACTACTTAGCACATCTTTATTATTGAAATGGTTAATTACAAGCTTATGTGAAGCTTATACATTATTGTCAAACAGTAATCACTAGTAGAATGTGTCCAAGGGCTTCAGTAAAAGGCTCTTACTATACGCCCTGACTCCTGTGTTAGGTTTTTAACTTTTGTATACTTGCTTTGTTATGTTTCTTCTTCTAAGTTCTAACTAACTAGTACTTTCTATCATCAGCCATGGAAGCTTTGATAACAAAACTGTAAACGATACAGTGGCTGCAAATGTGGTAAGGCTCCTCTATGTTACAATCTACGATTCTTCAGTCCCTATAAGCTGCCATACATCCTCTCTCTGTCCCAAAAGAATTATATGACCAATAATTGAATTGTTTATCCCATTATAAGTAGCAAGTAATTTTTTAACTTAATTATATACCAAATTGGGATAACAATTCGCACCATCAGCTAAAACTATTTTACTTTTCATTTTCTATCCACTTGAAATTGACTGTATTTTCCTTTAAATTTTTATTGTCCAATGACTCTATGGGCTCCATTGTTGTACTGTGGTTTATCTTGATGAAAAGGTATAGAATGGTTTTGAGGGTAGATAGGTTGTGGGAGTGGATATGTCACACTCTAATGCCCTCAAACTGGCTCGTAATTGATAATTTTTAATTGTTTTCTTTTGTATTACCATAGTTTGAGTTCTTTCTTGTAGGTTGCTTTGTATTTCACACTTCTTGTTTGGCCTTTTTGTGGGTTTCTTTTTGTACGTTTAGTGAAAAGTTAATTTTCCCATTTCAAAATAATTATGTAGGCAGGCTTAACTACTAGAACCAGGATTGGGTAAAATTTATTTACCTTGAACTTCTACAATAATATTTGCACTTATTTCTTTGATCTTTTATCATCTCTTTTCGAGAGCTGGGAAATTAGAATTCTGGGAATAAGGCTGCGACCATATTAAATAAAAGAAAAGCTGCAACCATATTAACGCTGGTGTACTTGAAGATTTTCTCATGAACAGAATGTAAAGAATCATAAATTATTGAATGTTGTATGTATTGCAGTACAATTCTGCCATGACATTTTGTATTTATGCATAAATACAGTCACCTATGGTCAAAATTATTTAGTTATGTTTGAAAAACAATTTGTAGCACAATGTATTTGGTGAATCCTGTTAACTTTAGGTGAATTTTTCTTCATGTTCAGATTCCTCAAAATCCCCCATGTCCAACACTTTTTGTGGCAAATCTAGGGCCAGGTTGCACCGAACAAGAGCTTATTCAAATTTTTTTGAGGTTAATAACTTTAGTGTACATTATTTAGGTTATGTTCTGAACATGTAAGAACATGCATCATCTGTTTCTTTGATAATTCCCACCAGATGCCCGGGATTCTTAAAACTAAAAATGCAGAGCACGTATGGAGCCCCAGTTGCTTTTGTTGATTTTCAGGTTAGGAGTGCCCTTCCTCTTCTCAATTATATTTTTCTCTAGCTGATGAATCTTTTTCTACTTAGCATTGAAATTCATAAATCAGACTCCATTCTGCGGTTTTTTTCAATTAGTTATGTGCAGACTATCTGCACTACCCACATCATCACGCTTATAGCTTTGTATTTTTTATTTCCCTGAACATTCACTCAACTTGTTGCTTTTTAGATACTCCCGGGAACTTTTTATTGGTGTAAAAATAATATTGGAAGTTCTATTTTGGTCTGTTGCTTCCATTGTTTCAAGTTCAGGCCATTAATTAAATCTTTCACGTAGTATTTATTTAAAAGGGAGACCAAGTTTTTTCTTTAAATGGAAAAGGTATCTGGGTCTTCCATTGTTATGTTGTGTGAAATGTGGAGTTACAATGTGTGCAGGATACGGCCTGTTCAACTGGAGCTCTGAACCATCTGCAAGGCTCAATTCTATACTCATCACCTCCTGGGGAGGGCATGCGGTTGGAGTATCCTTTTACAAGTTTATTTTTTGAAAAAAGAATTCTTTACAATTGTACTGTTACTACATCGTGCCTTCAAATATTTTGCTTAACCCAACATTTAGATACGCAAAATCAAGAATGGGTATGCGGAAGAAACCGAAATGAATAAAAACAATTCTTGCATTCAGTAAGGACTGGAGCCAACTAAGGAAGAAAATAGAGACCCCTCCCTCAGGCCATGTGCCTACAATGGTTTATGAAGGTCAGAAGTAGTGCATTACTTGTACCCTTATGTAGATGAGGAAATTAACAACATATACCATTCCCATATTTTTTTTTCATTGTATCAAATGCTGCCTTCTCAGTCTTAAACTTCAATTTTTTTTTTAATATCTTCAGAGCCCCATTAGTTCTACATTTATTACTGATAAAGAGTATCTTTTCCACTAACATGCCAGAAAAAAAAAAAGTAGTTTCCTTTGGAGCCGGATAACGTAGATTCGTTTGGATAGGTATTGTAATATTATGGTCAACCCACTTTTTTTTTTTTTTGTGTGT

mRNA sequence

GGCGGTCATACCCAACGATCAATTGGAGGAGTCGCAGCCCTTTGCCCAGCAGCCAACCCCACGGCCTCATCTAATAAGAAAGATTATATCCAAAAACAAAATGAAGCAACAACAACATTTTGGAGTTTATTAAAGCCATATGTGTTGTTATCCCATCGGCTAAGGTTAAGGTTGTTAGTTGAAAAACAATACAGTGGACTGAAATTGGGCCATTGGGAATTTGGCGTTTAATTGTGAGCCCATTTGAGTTTTGATGGACAATGGTTTATCACAATTGAAGGAATCCGACCCATAATTCAGGGCTACCAGCTCTCTTTCTCTCTCTCGCTCTCTCTCTCTCGCTACTTGGTCAGAGACTCGGAGGTAACAGCACTCCGATGGACGACATGACGAGCTACTATCCGCCACCGCAACCACCGCCGCAGCCTTCTGGTCTTGAACCTCCTCACTATCCCTATTACCAGGTGCCTCCTCCTCCTTCAGCACCCCCGTCTCAGCATTACCTCTCTCAACACCCGTCCACCTTCGCTTCCTATGCCTTACCTCTTTTACCTCACACAACCTCCATCAATGAGGTCCGTACCCTATTCATAGCTGGTCTTCCTGAAGATGTCAAGCCCCGAGAAATTTACAATCTCTTCCGGGAGTTTCCGGGATACGAGTCCTCTCATCTTCGGACCCCCACGCAGACGACCCAGCCATTTGCATTTGCTGTATTCTCAGACCAGCAGTCTGCCGTTGGTGCAATGCATGCTGTAAATGGCATGGTGTTTGATCTTGAGAAGCAGTCAGTGCTGTATGTTGATTTGGCTAAATCTAATTCAAGATCAAAACGGACGAGGACAGAGGAGGAAAGATATGGATCAGATAAGAAAGCTAAAGTCTCTATCATTCCAAGGAGTACTCCTGATCCTGGTCTTGGCAGCACTCACATGTCTGGAATGGGTAATTCTGCTTACAACACGATTGGTTATCCATCTGCACAAAGCCATGGAAGCTTTGATAACAAAACTGTAAACGATACAGTGGCTGCAAATGTGATTCCTCAAAATCCCCCATGTCCAACACTTTTTGTGGCAAATCTAGGGCCAGGTTGCACCGAACAAGAGCTTATTCAAATTTTTTTGAGATGCCCGGGATTCTTAAAACTAAAAATGCAGAGCACGTATGGAGCCCCAGTTGCTTTTGTTGATTTTCAGGATACGGCCTGTTCAACTGGAGCTCTGAACCATCTGCAAGGCTCAATTCTATACTCATCACCTCCTGGGGAGGGCATGCGGTTGGAATACGCAAAATCAAGAATGGGTATGCGGAAGAAACCGAAATGAATAAAAACAATTCTTGCATTCAGTAAGGACTGGAGCCAACTAAGGAAGAAAATAGAGACCCCTCCCTCAGGCCATGTGCCTACAATGGTTTATGAAGGTCAGAAGTAGTGCATTACTTGTACCCTTATGTAGATGAGGAAATTAACAACATATACCATTCCCATATTTTTTTTTCATTGTATCAAATGCTGCCTTCTCAGTCTTAAACTTCAATTTTTTTTTTAATATCTTCAGAGCCCCATTAGTTCTACATTTATTACTGATAAAGAGTATCTTTTCCACTAACATGCCAGAAAAAAAAAAAGTAGTTTCCTTTGGAGCCGGATAACGTAGATTCGTTTGGATAGGTATTGTAATATTATGGTCAACCCACTTTTTTTTTTTTTTGTGTGT

Coding sequence (CDS)

ATGGACGACATGACGAGCTACTATCCGCCACCGCAACCACCGCCGCAGCCTTCTGGTCTTGAACCTCCTCACTATCCCTATTACCAGGTGCCTCCTCCTCCTTCAGCACCCCCGTCTCAGCATTACCTCTCTCAACACCCGTCCACCTTCGCTTCCTATGCCTTACCTCTTTTACCTCACACAACCTCCATCAATGAGGTCCGTACCCTATTCATAGCTGGTCTTCCTGAAGATGTCAAGCCCCGAGAAATTTACAATCTCTTCCGGGAGTTTCCGGGATACGAGTCCTCTCATCTTCGGACCCCCACGCAGACGACCCAGCCATTTGCATTTGCTGTATTCTCAGACCAGCAGTCTGCCGTTGGTGCAATGCATGCTGTAAATGGCATGGTGTTTGATCTTGAGAAGCAGTCAGTGCTGTATGTTGATTTGGCTAAATCTAATTCAAGATCAAAACGGACGAGGACAGAGGAGGAAAGATATGGATCAGATAAGAAAGCTAAAGTCTCTATCATTCCAAGGAGTACTCCTGATCCTGGTCTTGGCAGCACTCACATGTCTGGAATGGGTAATTCTGCTTACAACACGATTGGTTATCCATCTGCACAAAGCCATGGAAGCTTTGATAACAAAACTGTAAACGATACAGTGGCTGCAAATGTGATTCCTCAAAATCCCCCATGTCCAACACTTTTTGTGGCAAATCTAGGGCCAGGTTGCACCGAACAAGAGCTTATTCAAATTTTTTTGAGATGCCCGGGATTCTTAAAACTAAAAATGCAGAGCACGTATGGAGCCCCAGTTGCTTTTGTTGATTTTCAGGATACGGCCTGTTCAACTGGAGCTCTGAACCATCTGCAAGGCTCAATTCTATACTCATCACCTCCTGGGGAGGGCATGCGGTTGGAATACGCAAAATCAAGAATGGGTATGCGGAAGAAACCGAAATGA

Protein sequence

MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRSTPDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGCTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGMRLEYAKSRMGMRKKPK*

Homology

[Close]

BLAST of CsGy6G027740 vs. ExPASy Swiss-Prot
Match: Q8VC52 (RNA-binding protein with multiple splicing 2 OS=Mus musculus OX=10090 GN=Rbpms2 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.9e-14
Identity = 39/90 (43.33%), Postives = 60/90 (66.67%), Query Frame = 0


Query: 66  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMH 125
           EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F +F  +  A  A +
Sbjct: 23  EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSR--QPVGFVIFDSRAGAEAAKN 82

Query: 126 AVNGMVFDLEKQSVLYVDLAKSNSRSKRTR 156
           A+NG+ FD E    L ++ AK+N++  +++
Sbjct: 83  ALNGIRFDPENPQTLRLEFAKANTKMAKSK 110

[Close]

BLAST of CsGy6G027740 vs. ExPASy Swiss-Prot
Match: Q6ZRY4 (RNA-binding protein with multiple splicing 2 OS=Homo sapiens OX=9606 GN=RBPMS2 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.8e-14
Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 66  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMH 125
           EVRTLF++GLP D+KPRE+Y LFR F GYE S ++   +  QP  F +F  +  A  A +
Sbjct: 29  EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTAR--QPVGFVIFDSRAGAEAAKN 88

Query: 126 AVNGMVFDLEKQSVLYVDLAKSNSRSKRTR 156
           A+NG+ FD E    L ++ AK+N++  +++
Sbjct: 89  ALNGIRFDPENPQTLRLEFAKANTKMAKSK 116

[Close]

BLAST of CsGy6G027740 vs. ExPASy Swiss-Prot
Match: Q6DH13 (RNA-binding protein, mRNA-processing factor 2a OS=Danio rerio OX=7955 GN=rbpms2a PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 5.0e-14
Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 66  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMH 125
           EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F  F  +  A  A +
Sbjct: 18  EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRSGAEAAKN 77

Query: 126 AVNGMVFDLEKQSVLYVDLAKSNSRSKRTR 156
           A+NG+ FD E    L ++ AK+N++  +++
Sbjct: 78  ALNGIRFDPESPQTLRLEFAKANTKMAKSK 105

[Close]

BLAST of CsGy6G027740 vs. ExPASy Swiss-Prot
Match: Q9W6I1 (RNA-binding protein with multiple splicing 2 OS=Gallus gallus OX=9031 GN=RBPMS2 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 6.5e-14
Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 66  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMH 125
           EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F  F  +  A  A +
Sbjct: 20  EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDSRAGAEAAKN 79

Query: 126 AVNGMVFDLEKQSVLYVDLAKSNSRSKRTR 156
           A+NG+ FD E    L ++ AK+N++  +++
Sbjct: 80  ALNGIRFDPENPQTLRLEFAKANTKMAKSK 107

[Close]

BLAST of CsGy6G027740 vs. ExPASy Swiss-Prot
Match: Q9YGP5 (RNA-binding protein with multiple splicing 2 OS=Xenopus laevis OX=8355 GN=rbpms2 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 8.5e-14
Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 66  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMH 125
           EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F  F ++  A  A +
Sbjct: 18  EVRTLFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSK--QPVGFVTFDNRAGAEAAKN 77

Query: 126 AVNGMVFDLEKQSVLYVDLAKSNSRSKRTR 156
           A+NG+ FD E    L ++ AK+N++  + +
Sbjct: 78  ALNGIRFDPENPQTLRLEFAKANTKMAKNK 105

[Close]

BLAST of CsGy6G027740 vs. NCBI nr
Match: XP_011657876.1 (U1 small nuclear ribonucleoprotein A isoform X2 [Cucumis sativus])

HSP 1 Score: 634 bits (1634), Expect = 4.27e-229
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0


Query: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALPLLPH 60
           MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALPLLPH
Sbjct: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALPLLPH 60

Query: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120
           TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA
Sbjct: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120

Query: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRSTPDPG 180
           VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRSTPDPG
Sbjct: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRSTPDPG 180

Query: 181 LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC 240
           LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC
Sbjct: 181 LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC 240

Query: 241 TEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM 300
           TEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM
Sbjct: 241 TEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM 300

Query: 301 RLEYAKSRMGMRKKPK 316
           RLEYAKSRMGMRKKPK
Sbjct: 301 RLEYAKSRMGMRKKPK 316

[Close]

BLAST of CsGy6G027740 vs. NCBI nr
Match: XP_011657875.1 (U1 small nuclear ribonucleoprotein A isoform X1 [Cucumis sativus] >KGN48541.1 hypothetical protein Csa_002833 [Cucumis sativus])

HSP 1 Score: 629 bits (1622), Expect = 2.99e-227
Identity = 316/317 (99.68%), Postives = 316/317 (99.68%), Query Frame = 0


Query: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALPLLPH 60
           MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALPLLPH
Sbjct: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALPLLPH 60

Query: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120
           TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA
Sbjct: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120

Query: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRSTPDP- 180
           VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRSTPDP 
Sbjct: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRSTPDPA 180

Query: 181 GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG 240
           GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG
Sbjct: 181 GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG 240

Query: 241 CTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG 300
           CTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG
Sbjct: 241 CTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG 300

Query: 301 MRLEYAKSRMGMRKKPK 316
           MRLEYAKSRMGMRKKPK
Sbjct: 301 MRLEYAKSRMGMRKKPK 317

[Close]

BLAST of CsGy6G027740 vs. NCBI nr
Match: XP_008440306.2 (PREDICTED: protein WHI4 isoform X2 [Cucumis melo])

HSP 1 Score: 623 bits (1606), Expect = 3.38e-224
Identity = 311/316 (98.42%), Postives = 312/316 (98.73%), Query Frame = 0


Query: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALPLLPH 60
           MDDMTSYYPPPQPPPQPSGLEP HYPYYQVPPPPSAPPSQHYLSQHP TFASY LPLLPH
Sbjct: 40  MDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLPLLPH 99

Query: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120
           TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA
Sbjct: 100 TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 159

Query: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRSTPDPG 180
           VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTE+ERYGSDKKAKVSII RSTPDPG
Sbjct: 160 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPG 219

Query: 181 LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC 240
           LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC
Sbjct: 220 LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC 279

Query: 241 TEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM 300
           TEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM
Sbjct: 280 TEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM 339

Query: 301 RLEYAKSRMGMRKKPK 316
           RLEYAKSRMGMRKKPK
Sbjct: 340 RLEYAKSRMGMRKKPK 355

[Close]

BLAST of CsGy6G027740 vs. NCBI nr
Match: XP_016899375.1 (PREDICTED: U1 small nuclear ribonucleoprotein A isoform X1 [Cucumis melo])

HSP 1 Score: 618 bits (1594), Expect = 2.37e-222
Identity = 311/317 (98.11%), Postives = 312/317 (98.42%), Query Frame = 0


Query: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALPLLPH 60
           MDDMTSYYPPPQPPPQPSGLEP HYPYYQVPPPPSAPPSQHYLSQHP TFASY LPLLPH
Sbjct: 40  MDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLPLLPH 99

Query: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120
           TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA
Sbjct: 100 TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 159

Query: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRSTPDP- 180
           VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTE+ERYGSDKKAKVSII RSTPDP 
Sbjct: 160 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPA 219

Query: 181 GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG 240
           GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG
Sbjct: 220 GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG 279

Query: 241 CTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG 300
           CTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG
Sbjct: 280 CTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG 339

Query: 301 MRLEYAKSRMGMRKKPK 316
           MRLEYAKSRMGMRKKPK
Sbjct: 340 MRLEYAKSRMGMRKKPK 356

[Close]

BLAST of CsGy6G027740 vs. NCBI nr
Match: XP_038881694.1 (protein WHI4 isoform X2 [Benincasa hispida])

HSP 1 Score: 597 bits (1540), Expect = 9.45e-215
Identity = 300/317 (94.64%), Postives = 303/317 (95.58%), Query Frame = 0


Query: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPS-APPSQHYLSQHPSTFASYALPLLP 60
           MDDM SYYP PQPPPQPSGLEPPHYP+YQVPPPPS APPSQHYLSQHP TFASY LP LP
Sbjct: 1   MDDMASYYPQPQPPPQPSGLEPPHYPFYQVPPPPSSAPPSQHYLSQHPPTFASYGLPFLP 60

Query: 61  HTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQS 120
           H  SINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQS
Sbjct: 61  HAASINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQS 120

Query: 121 AVGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRSTPDP 180
           A+GAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTE+ERYGSDKKAKVSI  RSTPDP
Sbjct: 121 AIGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIFSRSTPDP 180

Query: 181 GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG 240
           GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGP 
Sbjct: 181 GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPS 240

Query: 241 CTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG 300
           CTEQELIQIF RCPGFLKLKMQSTYGAPVAFVDFQDT CSTGALNHLQGSILYSSPPGEG
Sbjct: 241 CTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTGCSTGALNHLQGSILYSSPPGEG 300

Query: 301 MRLEYAKSRMGMRKKPK 316
           MRLEYAKSRMGMRKK K
Sbjct: 301 MRLEYAKSRMGMRKKLK 317

[Close]

BLAST of CsGy6G027740 vs. ExPASy TrEMBL
Match: A0A0A0KLD8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G491040 PE=4 SV=1)

HSP 1 Score: 629 bits (1622), Expect = 1.45e-227
Identity = 316/317 (99.68%), Postives = 316/317 (99.68%), Query Frame = 0


Query: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALPLLPH 60
           MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALPLLPH
Sbjct: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALPLLPH 60

Query: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120
           TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA
Sbjct: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120

Query: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRSTPDP- 180
           VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRSTPDP 
Sbjct: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRSTPDPA 180

Query: 181 GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG 240
           GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG
Sbjct: 181 GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG 240

Query: 241 CTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG 300
           CTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG
Sbjct: 241 CTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG 300

Query: 301 MRLEYAKSRMGMRKKPK 316
           MRLEYAKSRMGMRKKPK
Sbjct: 301 MRLEYAKSRMGMRKKPK 317

[Close]

BLAST of CsGy6G027740 vs. ExPASy TrEMBL
Match: A0A1S3B1E9 (protein WHI4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484791 PE=4 SV=1)

HSP 1 Score: 623 bits (1606), Expect = 1.64e-224
Identity = 311/316 (98.42%), Postives = 312/316 (98.73%), Query Frame = 0


Query: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALPLLPH 60
           MDDMTSYYPPPQPPPQPSGLEP HYPYYQVPPPPSAPPSQHYLSQHP TFASY LPLLPH
Sbjct: 40  MDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLPLLPH 99

Query: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120
           TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA
Sbjct: 100 TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 159

Query: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRSTPDPG 180
           VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTE+ERYGSDKKAKVSII RSTPDPG
Sbjct: 160 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPG 219

Query: 181 LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC 240
           LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC
Sbjct: 220 LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC 279

Query: 241 TEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM 300
           TEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM
Sbjct: 280 TEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM 339

Query: 301 RLEYAKSRMGMRKKPK 316
           RLEYAKSRMGMRKKPK
Sbjct: 340 RLEYAKSRMGMRKKPK 355

[Close]

BLAST of CsGy6G027740 vs. ExPASy TrEMBL
Match: A0A1S4DUH9 (U1 small nuclear ribonucleoprotein A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484791 PE=4 SV=1)

HSP 1 Score: 618 bits (1594), Expect = 1.15e-222
Identity = 311/317 (98.11%), Postives = 312/317 (98.42%), Query Frame = 0


Query: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALPLLPH 60
           MDDMTSYYPPPQPPPQPSGLEP HYPYYQVPPPPSAPPSQHYLSQHP TFASY LPLLPH
Sbjct: 40  MDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLPLLPH 99

Query: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120
           TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA
Sbjct: 100 TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 159

Query: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRSTPDP- 180
           VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTE+ERYGSDKKAKVSII RSTPDP 
Sbjct: 160 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPA 219

Query: 181 GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG 240
           GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG
Sbjct: 220 GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPG 279

Query: 241 CTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG 300
           CTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG
Sbjct: 280 CTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEG 339

Query: 301 MRLEYAKSRMGMRKKPK 316
           MRLEYAKSRMGMRKKPK
Sbjct: 340 MRLEYAKSRMGMRKKPK 356

[Close]

BLAST of CsGy6G027740 vs. ExPASy TrEMBL
Match: A0A5D3CNE3 (U1 small nuclear ribonucleoprotein A isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004640 PE=4 SV=1)

HSP 1 Score: 599 bits (1544), Expect = 6.17e-215
Identity = 298/308 (96.75%), Postives = 302/308 (98.05%), Query Frame = 0


Query: 1   MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALPLLPH 60
           MDDMTSYYPPPQPPPQPSGLEP HYPYYQVPPPPSAPPSQHYLSQHP TFASY LPLLPH
Sbjct: 41  MDDMTSYYPPPQPPPQPSGLEPSHYPYYQVPPPPSAPPSQHYLSQHPPTFASYGLPLLPH 100

Query: 61  TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 120
           TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA
Sbjct: 101 TTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSA 160

Query: 121 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRSTPDPG 180
           VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTE+ERYGSDKKAKVSII RSTPDPG
Sbjct: 161 VGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPG 220

Query: 181 LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC 240
           LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC
Sbjct: 221 LGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANLGPGC 280

Query: 241 TEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM 300
           TEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM
Sbjct: 281 TEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGM 340

Query: 301 RLEYAKSR 308
           RL+  ++R
Sbjct: 341 RLDQEENR 348

[Close]

BLAST of CsGy6G027740 vs. ExPASy TrEMBL
Match: A0A6J1GD02 (protein WHI4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453048 PE=4 SV=1)

HSP 1 Score: 579 bits (1492), Expect = 1.06e-207
Identity = 295/320 (92.19%), Postives = 301/320 (94.06%), Query Frame = 0


Query: 1   MDDMTSYYPPP---QPPPQPSGLEPPHYPYYQVPPPPS-APPSQHYLSQHPSTFASYALP 60
           MDD+TSYY PP   QPP QPSGLE PHYPYYQVPPPPS AP SQHYL+QHP TFASY LP
Sbjct: 1   MDDITSYYAPPPQPQPPSQPSGLEAPHYPYYQVPPPPSSAPSSQHYLAQHPPTFASYGLP 60

Query: 61  LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSD 120
            LPH  SINEVRTLFIAGLP+DVKPREIYNLFREFPGYESSHLR+PTQTTQPFAFAVFSD
Sbjct: 61  FLPHAASINEVRTLFIAGLPDDVKPREIYNLFREFPGYESSHLRSPTQTTQPFAFAVFSD 120

Query: 121 QQSAVGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRST 180
           QQSAVGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTE+ERYGSDKKAKVSI  RST
Sbjct: 121 QQSAVGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIFSRST 180

Query: 181 PDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANL 240
           PDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFD+KTVNDTVAANV PQNPPCPTLFVANL
Sbjct: 181 PDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDSKTVNDTVAANVTPQNPPCPTLFVANL 240

Query: 241 GPGCTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPP 300
           GP CTEQELIQIF RCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPP
Sbjct: 241 GPSCTEQELIQIFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPP 300

Query: 301 GEGMRLEYAKSRMGMRKKPK 316
           GEGMRLEYAKSRMGMRKK K
Sbjct: 301 GEGMRLEYAKSRMGMRKKLK 320

[Close]

BLAST of CsGy6G027740 vs. TAIR 10
Match: AT2G42240.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 293.1 bits (749), Expect = 2.6e-79
Identity = 176/318 (55.35%), Postives = 208/318 (65.41%), Query Frame = 0


Query: 1   MDDMTSYYP----PPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALP 60
           MDD+ +YY     P   PP P G          V P P       YL  H S  A     
Sbjct: 1   MDDLEAYYSHYNLPAMVPPPPPG----------VSPIPITSAHSVYLPTHVSIGAR---- 60

Query: 61  LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSD 120
                   +EVRTLF+AGLPEDVKPREIYNLFREFPGYE+SHLR+ +   +PFAFAVFSD
Sbjct: 61  --------DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRS-SDGAKPFAFAVFSD 120

Query: 121 QQSAVGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRST 180
            QSAV  MHA+NGMVFDLEK S L++DLAKSN +SKR+RT ++ + S KK K      +T
Sbjct: 121 LQSAVAVMHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRT-DDGWESLKKLKSW---NTT 180

Query: 181 PDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANL 240
            + G GS    GM +SAYNTIGY  AQS G   N       +        PCPTLF+AN+
Sbjct: 181 TESGFGSFQTPGMSSSAYNTIGYSPAQSQG-IANVAGRAPTSRKPSKAADPCPTLFIANM 240

Query: 241 GPGCTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPP 300
           GP CTE ELIQ+F RC GFLKLK+Q TYG PVAFVDFQD +CS+ AL+ LQG++LYSS  
Sbjct: 241 GPNCTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTLQGTVLYSSLT 290

Query: 301 GEGMRLEYAKSRMGMRKK 315
           GE +RL+YA+SRMGMRKK
Sbjct: 301 GEVLRLQYARSRMGMRKK 290

[Close]

BLAST of CsGy6G027740 vs. TAIR 10
Match: AT2G42240.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 282.3 bits (721), Expect = 4.7e-76
Identity = 174/318 (54.72%), Postives = 205/318 (64.47%), Query Frame = 0


Query: 1   MDDMTSYYP----PPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALP 60
           MDD+ +YY     P   PP P G          V P P       YL  H S  A     
Sbjct: 1   MDDLEAYYSHYNLPAMVPPPPPG----------VSPIPITSAHSVYLPTHVSIGAR---- 60

Query: 61  LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSD 120
                   +EVRTLF+AGLPEDVKPREIYNLFREFPGYE+SHLR+ +   +PFAFAVFSD
Sbjct: 61  --------DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRS-SDGAKPFAFAVFSD 120

Query: 121 QQSAVGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRST 180
            QSAV  MHA+NGMVFDLEK S L++DLAKSN +SKR+RT ++ + S KK K      +T
Sbjct: 121 LQSAVAVMHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRT-DDGWESLKKLKSW---NTT 180

Query: 181 PDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANL 240
            + G GS    GM +SAYNTIGY  AQS G   N       +        PCPTLF+AN+
Sbjct: 181 TESGFGSFQTPGMSSSAYNTIGYSPAQSQG-IANVAGRAPTSRKPSKAADPCPTLFIANM 240

Query: 241 GPGCTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPP 300
           GP CTE ELIQ+F RC GFLKLK+Q TYG PVAFVDFQD +CS+ AL+ LQG++LYSS  
Sbjct: 241 GPNCTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTLQGTVLYSSLT 287

Query: 301 GEGMRLEYAKSRMGMRKK 315
           GE +RL+   SRMGMRKK
Sbjct: 301 GEVLRLQ---SRMGMRKK 287

[Close]

BLAST of CsGy6G027740 vs. TAIR 10
Match: AT2G42240.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 276.2 bits (705), Expect = 3.4e-74
Identity = 167/308 (54.22%), Postives = 198/308 (64.29%), Query Frame = 0


Query: 1   MDDMTSYYP----PPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALP 60
           MDD+ +YY     P   PP P G          V P P       YL  H S  A     
Sbjct: 1   MDDLEAYYSHYNLPAMVPPPPPG----------VSPIPITSAHSVYLPTHVSIGAR---- 60

Query: 61  LLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSD 120
                   +EVRTLF+AGLPEDVKPREIYNLFREFPGYE+SHLR+ +   +PFAFAVFSD
Sbjct: 61  --------DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRS-SDGAKPFAFAVFSD 120

Query: 121 QQSAVGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRST 180
            QSAV  MHA+NGMVFDLEK S L++DLAKSN +SKR+RT ++ + S KK K      +T
Sbjct: 121 LQSAVAVMHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRT-DDGWESLKKLKSW---NTT 180

Query: 181 PDPGLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANVIPQNPPCPTLFVANL 240
            + G GS    GM +SAYNTIGY  AQS G   N       +        PCPTLF+AN+
Sbjct: 181 TESGFGSFQTPGMSSSAYNTIGYSPAQSQG-IANVAGRAPTSRKPSKAADPCPTLFIANM 240

Query: 241 GPGCTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPP 300
           GP CTE ELIQ+F RC GFLKLK+Q TYG PVAFVDFQD +CS+ AL+ LQG++LYSS  
Sbjct: 241 GPNCTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTLQGTVLYSSLT 280

Query: 301 GEGMRLEY 305
           GE +RL+Y
Sbjct: 301 GEVLRLQY 280

[Close]

BLAST of CsGy6G027740 vs. TAIR 10
Match: AT3G13700.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 149.1 bits (375), Expect = 6.2e-36
Identity = 111/308 (36.04%), Postives = 153/308 (49.68%), Query Frame = 0


Query: 23  PHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPR 82
           P Y Y     P   PP    L+  P                   + TLF++GLP DVK R
Sbjct: 9   PFYVYQLHSHPHHLPPQLPLLADEPGA-----------------INTLFVSGLPNDVKAR 68

Query: 83  EIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVNGMVFDLEKQSVLYV 142
           EI+NLFR   G+ES  L+   +  Q  AFA F+  + A+ AM+ +NG+ FD +  S L++
Sbjct: 69  EIHNLFRRRHGFESCQLKYTGRGDQVVAFATFTSHRFALAAMNELNGVKFDPQTGSNLHI 128

Query: 143 DLAKSNSRSKRTRTEEERYGSDKKAKVSIIPRSTPDPGLGSTHMSGMGNSAYNTIGYPSA 202
           +LA+SNSR K      ER GS       +I     +        S  G+S  + +     
Sbjct: 129 ELARSNSRRK------ERPGS---GPYVVIDNRNKEISKSQDDQSDEGDSDPDEV----- 188

Query: 203 QSHGSFDNKTVNDTV--AANVIPQNP-------------------PCPTLFVANLGPGCT 262
           Q  G+ D+   NDT    A+  P +                     C TLF+ANLGP CT
Sbjct: 189 QEPGNSDSPKENDTTKSEADSEPDSKAPSANGHLEKASEGGSGARACSTLFIANLGPNCT 248

Query: 263 EQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGSILYSSPPGEGMR 310
           E EL Q+  R PGF  LK+++  G PVAF DF++   +T A+NHLQG++L SS  G GM 
Sbjct: 249 EDELKQLLSRYPGFHILKIRARGGMPVAFADFEEIEQATDAMNHLQGNLLSSSDRG-GMH 284

[Close]

BLAST of CsGy6G027740 vs. TAIR 10
Match: AT3G21215.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 124.8 bits (312), Expect = 1.2e-28
Identity = 107/333 (32.13%), Postives = 154/333 (46.25%), Query Frame = 0


Query: 8   YPP---PQPPPQPSGLEPPH-YPYYQVPPPPSAPPSQHYLSQHPSTFASYALPLLPHTTS 67
           +PP   P PP   S   PPH  P +  PPPP      H                  +   
Sbjct: 13  WPPAGAPPPPAAVSSAAPPHPPPIHHHPPPPPVLVDNH------------------NRPP 72

Query: 68  INEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGA 127
            +E+RT+FIAGLP+DVK RE+ NL R  PGYE+S +    +  +P  FA+FS  Q A+ A
Sbjct: 73  YDELRTIFIAGLPDDVKERELLNLLRWLPGYEASQVNFKGE--KPMGFALFSTAQFAMAA 132

Query: 128 MHAVNGMVFDLEKQSVLYVDLAKSNSRSKR---------TRTEEERYGSDKKAKV-SIIP 187
              +  MVFD E +SV++ ++AK N   KR          +++  R G D    V S  P
Sbjct: 133 KDTLQHMVFDAESKSVIHTEMAKKNLFVKRGIVGDSNAYDQSKRLRTGGDCTHSVYSPSP 192

Query: 188 RSTPDPGL-GSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTV-----------NDTVAANV 247
              P P + G  H        Y     P    +  +    V           +  V    
Sbjct: 193 FHPPPPPVWGPPH-------GYMAPAPPPYDPYAGYHAPPVPMPTPPPIAAPSSYVPVQN 252

Query: 248 IPQNPPCPTLFVANLGPGCTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTG 307
           I  NPPC TLF+ NLG    E+EL  +    PGF ++K+       V F++F+D   +T 
Sbjct: 253 IKDNPPCNTLFIGNLGENINEEELRSLLSAQPGFKQMKILRQERHTVCFIEFEDVNSATN 312

Query: 308 ALNHLQGSILYSSPPGEGMRLEYAKSRMGMRKK 315
             ++LQG+++ SS    GMR++Y+K+  G RK+
Sbjct: 313 VHHNLQGAVIPSS-GSIGMRIQYSKNPYGKRKE 317

The following BLAST results are available for this feature:

BLAST of CsGy6G027740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VC52	2.9e-14	43.33	RNA-binding protein with multiple splicing 2 OS=Mus musculus OX=10090 GN=Rbpms2 ...	[more]
Q6ZRY4	3.8e-14	43.33	RNA-binding protein with multiple splicing 2 OS=Homo sapiens OX=9606 GN=RBPMS2 P...	[more]
Q6DH13	5.0e-14	43.33	RNA-binding protein, mRNA-processing factor 2a OS=Danio rerio OX=7955 GN=rbpms2a...	[more]
Q9W6I1	6.5e-14	43.33	RNA-binding protein with multiple splicing 2 OS=Gallus gallus OX=9031 GN=RBPMS2 ...	[more]
Q9YGP5	8.5e-14	43.33	RNA-binding protein with multiple splicing 2 OS=Xenopus laevis OX=8355 GN=rbpms2...	[more]

BLAST of CsGy6G027740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657876.1	4.27e-229	100.00	U1 small nuclear ribonucleoprotein A isoform X2 [Cucumis sativus]	[more]
XP_011657875.1	2.99e-227	99.68	U1 small nuclear ribonucleoprotein A isoform X1 [Cucumis sativus] >KGN48541.1 hy...	[more]
XP_008440306.2	3.38e-224	98.42	PREDICTED: protein WHI4 isoform X2 [Cucumis melo]	[more]
XP_016899375.1	2.37e-222	98.11	PREDICTED: U1 small nuclear ribonucleoprotein A isoform X1 [Cucumis melo]	[more]
XP_038881694.1	9.45e-215	94.64	protein WHI4 isoform X2 [Benincasa hispida]	[more]

BLAST of CsGy6G027740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLD8	1.45e-227	99.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G491040 PE=4 SV=1	[more]
A0A1S3B1E9	1.64e-224	98.42	protein WHI4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484791 PE=4 SV=1	[more]
A0A1S4DUH9	1.15e-222	98.11	U1 small nuclear ribonucleoprotein A isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3CNE3	6.17e-215	96.75	U1 small nuclear ribonucleoprotein A isoform X2 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A6J1GD02	1.06e-207	92.19	protein WHI4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453048 PE=4 SV=1	[more]

BLAST of CsGy6G027740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42240.1	2.6e-79	55.35	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G42240.3	4.7e-76	54.72	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G42240.2	3.4e-74	54.22	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G13700.2	6.2e-36	36.04	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G21215.1	1.2e-28	32.13	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 230..299 e-value: 0.0011 score: 28.2 coord: 69..141 e-value: 4.0E-8 score: 43.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 70..133 e-value: 4.9E-10 score: 39.1 coord: 231..293 e-value: 1.8E-7 score: 30.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 68..147 score: 12.236282
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 229..307 score: 11.008294
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 221..315 e-value: 1.3E-16 score: 62.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 64..157 e-value: 1.0E-20 score: 75.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..167
None	No IPR available	PANTHER	PTHR10501	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B	coord: 1..302
None	No IPR available	PANTHER	PTHR10501:SF43	RNA-BINDING PROTEIN-RELATED	coord: 1..302
None	No IPR available	CDD	cd12245	RRM_scw1_like	coord: 227..306 e-value: 1.50185E-39 score: 131.943
None	No IPR available	CDD	cd12420	RRM_RBPMS_like	coord: 68..143 e-value: 1.57822E-30 score: 108.511
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 67..294

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G027740.2	CsGy6G027740.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding