CsGy6G026870 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G026870
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	HTH-type transcriptional regulator protein ptxE
Location	Gy14Chr6: 26310095 .. 26310867 (-)
RNA-Seq Expression	CsGy6G026870
Synteny	CsGy6G026870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGTGTTCTCTCTAATTACCTCTGCCGTGCCTCGCCGCCGTTAATGGGTATTTGCAGTTCTTCGGAATCTACTGCCGTTGCCACTGCTAAATTGATCCTTCACGACGGAAGTCTGCAGGAATTTTCGTATCCGGTTAAAGTTTCGTACGTTCTTCAAAAGAACCCGTCCTGCTTCATATGTAACTCCGACGAAATGGATTTCGACGATGCTTTGTCAGCCATTAACGACGACGAGGAGCTTCAACTTGGACAGCTGTATTTTGCGCTGCCATTGAATAGGCTGAAGCAGCCGCTTCAGGCTGAAGAAATGGCGGCATTGGCTGTCAAGGCCAACTCTGCGCTAATGAAATGTAGCGGGGGAGATAAATGTGGCCACCGACGGAGATCGGTGTCTCCGGTGGTTTTTACGGTTGAGGAACTGAAGACTCGTAAACGAGTGGCGGCCGGCCGTGGTGGCGCCGGTGGAAGAAAAAAGTTCGCGGCGAATTTGATGGCGATCCCCGAGTAGGGTCCTTTTTGGAAAATGTGATGGGCTTGTTGTGTAAATAACGGAAAACAGGGGCTTCGTGGTTTAGGTTTTTTTATTTGTTTTTTCTTTAAAAAAAAAAAAAGAAGACAAAAAACAAAAACAAAACAATTGGACATTTGGACCTGTTTATTATTATTTTAAAAGTAGCACTAGCAGAATAGGGCATCCCACAAATGAAAAAGATAAATGTAGATTAGTCCATCTCATTTATCTTTGATGAGACTTCACATATTTTGATGACAC

mRNA sequence

GTTGTGTTCTCTCTAATTACCTCTGCCGTGCCTCGCCGCCGTTAATGGGTATTTGCAGTTCTTCGGAATCTACTGCCGTTGCCACTGCTAAATTGATCCTTCACGACGGAAGTCTGCAGGAATTTTCGTATCCGGTTAAAGTTTCGTACGTTCTTCAAAAGAACCCGTCCTGCTTCATATGTAACTCCGACGAAATGGATTTCGACGATGCTTTGTCAGCCATTAACGACGACGAGGAGCTTCAACTTGGACAGCTGTATTTTGCGCTGCCATTGAATAGGCTGAAGCAGCCGCTTCAGGCTGAAGAAATGGCGGCATTGGCTGTCAAGGCCAACTCTGCGCTAATGAAATGTAGCGGGGGAGATAAATGTGGCCACCGACGGAGATCGGTGTCTCCGGTGGTTTTTACGGTTGAGGAACTGAAGACTCGTAAACGAGTGGCGGCCGGCCGTGGTGGCGCCGGTGGAAGAAAAAAGTTCGCGGCGAATTTGATGGCGATCCCCGAGTAGGGTCCTTTTTGGAAAATGTGATGGGCTTGTTGTGTAAATAACGGAAAACAGGGGCTTCGTGGTTTAGGTTTTTTTATTTGTTTTTTCTTTAAAAAAAAAAAAAGAAGACAAAAAACAAAAACAAAACAATTGGACATTTGGACCTGTTTATTATTATTTTAAAAGTAGCACTAGCAGAATAGGGCATCCCACAAATGAAAAAGATAAATGTAGATTAGTCCATCTCATTTATCTTTGATGAGACTTCACATATTTTGATGACAC

Coding sequence (CDS)

ATGGGTATTTGCAGTTCTTCGGAATCTACTGCCGTTGCCACTGCTAAATTGATCCTTCACGACGGAAGTCTGCAGGAATTTTCGTATCCGGTTAAAGTTTCGTACGTTCTTCAAAAGAACCCGTCCTGCTTCATATGTAACTCCGACGAAATGGATTTCGACGATGCTTTGTCAGCCATTAACGACGACGAGGAGCTTCAACTTGGACAGCTGTATTTTGCGCTGCCATTGAATAGGCTGAAGCAGCCGCTTCAGGCTGAAGAAATGGCGGCATTGGCTGTCAAGGCCAACTCTGCGCTAATGAAATGTAGCGGGGGAGATAAATGTGGCCACCGACGGAGATCGGTGTCTCCGGTGGTTTTTACGGTTGAGGAACTGAAGACTCGTAAACGAGTGGCGGCCGGCCGTGGTGGCGCCGGTGGAAGAAAAAAGTTCGCGGCGAATTTGATGGCGATCCCCGAGTAG

Protein sequence

MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE*

Homology

[Close]

BLAST of CsGy6G026870 vs. NCBI nr
Match: XP_004141948.1 (uncharacterized protein LOC101203564 [Cucumis sativus] >KGN48462.1 hypothetical protein Csa_004291 [Cucumis sativus])

HSP 1 Score: 305 bits (781), Expect = 1.89e-104
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI
Sbjct: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120
           NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV
Sbjct: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120

Query: 121 FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE 154
           FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE
Sbjct: 121 FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE 154

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BLAST of CsGy6G026870 vs. NCBI nr
Match: XP_008440178.1 (PREDICTED: uncharacterized protein LOC103484721 [Cucumis melo] >TYK12939.1 HTH-type transcriptional regulator protein ptxE [Cucumis melo var. makuwa])

HSP 1 Score: 301 bits (771), Expect = 6.34e-103
Identity = 151/154 (98.05%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSSSES AVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI
Sbjct: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120
           NDDEELQ+GQLYFALPLNRL+QPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV
Sbjct: 61  NDDEELQIGQLYFALPLNRLRQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120

Query: 121 FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE 154
           FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE
Sbjct: 121 FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE 154

[Close]

BLAST of CsGy6G026870 vs. NCBI nr
Match: XP_038883003.1 (uncharacterized protein LOC120074082 [Benincasa hispida])

HSP 1 Score: 294 bits (753), Expect = 3.53e-100
Identity = 148/154 (96.10%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSSSES AVATAKLILHDGSLQEFSYPVKVSYVLQ NPSCFICNSDEMDFDDALSAI
Sbjct: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQNNPSCFICNSDEMDFDDALSAI 60

Query: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120
           +DDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKC GGDKC HRRRSVSPVV
Sbjct: 61  SDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCGGGDKCSHRRRSVSPVV 120

Query: 121 FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE 154
           FTVEELKTRKRVAAGRGGAGGR+KFAANLMAIPE
Sbjct: 121 FTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE 154

[Close]

BLAST of CsGy6G026870 vs. NCBI nr
Match: XP_022963140.1 (uncharacterized protein LOC111463438 [Cucurbita moschata])

HSP 1 Score: 285 bits (728), Expect = 2.29e-96
Identity = 143/154 (92.86%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSSSESTAVATAKLIL+DGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI
Sbjct: 1   MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120
           ND+EELQLGQLYFALPL+RLKQPLQAEEMAALAVKANSALMKC  GDKC HRRRSVSP+V
Sbjct: 61  NDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPLV 120

Query: 121 FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE 154
           FTVEELKTRKR++AGR GAGGRKKFAANL AIPE
Sbjct: 121 FTVEELKTRKRLSAGRSGAGGRKKFAANLSAIPE 154

[Close]

BLAST of CsGy6G026870 vs. NCBI nr
Match: XP_023518464.1 (uncharacterized protein LOC111781952 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283 bits (724), Expect = 9.32e-96
Identity = 143/154 (92.86%), Postives = 148/154 (96.10%), Query Frame = 0


Query: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSSSESTAVATAKLIL+DGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI
Sbjct: 1   MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120
           +DDEELQLGQLYFALPL+RLKQPLQAEEMAALAVKANSALMKC  GDKC HRRRSVSPVV
Sbjct: 61  SDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPVV 120

Query: 121 FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE 154
           FTVEELKTRKR++AGR GAGGR KFAANL AIPE
Sbjct: 121 FTVEELKTRKRLSAGRSGAGGRTKFAANLSAIPE 154

[Close]

BLAST of CsGy6G026870 vs. ExPASy TrEMBL
Match: A0A0A0KJB4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G488320 PE=4 SV=1)

HSP 1 Score: 305 bits (781), Expect = 9.16e-105
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI
Sbjct: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120
           NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV
Sbjct: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120

Query: 121 FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE 154
           FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE
Sbjct: 121 FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE 154

[Close]

BLAST of CsGy6G026870 vs. ExPASy TrEMBL
Match: A0A5D3CRH4 (HTH-type transcriptional regulator protein ptxE OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005340 PE=4 SV=1)

HSP 1 Score: 301 bits (771), Expect = 3.07e-103
Identity = 151/154 (98.05%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSSSES AVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI
Sbjct: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120
           NDDEELQ+GQLYFALPLNRL+QPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV
Sbjct: 61  NDDEELQIGQLYFALPLNRLRQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120

Query: 121 FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE 154
           FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE
Sbjct: 121 FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE 154

[Close]

BLAST of CsGy6G026870 vs. ExPASy TrEMBL
Match: A0A1S3B0H3 (uncharacterized protein LOC103484721 OS=Cucumis melo OX=3656 GN=LOC103484721 PE=4 SV=1)

HSP 1 Score: 301 bits (771), Expect = 3.07e-103
Identity = 151/154 (98.05%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSSSES AVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI
Sbjct: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120
           NDDEELQ+GQLYFALPLNRL+QPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV
Sbjct: 61  NDDEELQIGQLYFALPLNRLRQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120

Query: 121 FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE 154
           FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE
Sbjct: 121 FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE 154

[Close]

BLAST of CsGy6G026870 vs. ExPASy TrEMBL
Match: A0A6J1HH54 (uncharacterized protein LOC111463438 OS=Cucurbita moschata OX=3662 GN=LOC111463438 PE=4 SV=1)

HSP 1 Score: 285 bits (728), Expect = 1.11e-96
Identity = 143/154 (92.86%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSSSESTAVATAKLIL+DGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI
Sbjct: 1   MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120
           ND+EELQLGQLYFALPL+RLKQPLQAEEMAALAVKANSALMKC  GDKC HRRRSVSP+V
Sbjct: 61  NDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPLV 120

Query: 121 FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE 154
           FTVEELKTRKR++AGR GAGGRKKFAANL AIPE
Sbjct: 121 FTVEELKTRKRLSAGRSGAGGRKKFAANLSAIPE 154

[Close]

BLAST of CsGy6G026870 vs. ExPASy TrEMBL
Match: A0A6J1KPP1 (uncharacterized protein LOC111497150 OS=Cucurbita maxima OX=3661 GN=LOC111497150 PE=4 SV=1)

HSP 1 Score: 278 bits (711), Expect = 4.33e-94
Identity = 138/154 (89.61%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSSSESTAVATAKLIL+DG+LQEFSYPVKVSY+LQKNPSCFICNSDEMDFDDALSAI
Sbjct: 1   MGICSSSESTAVATAKLILNDGTLQEFSYPVKVSYILQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120
           +D+EELQLGQLYFALPL+RLKQPLQAEEMAALAVKANSALMKC  GDKC HRRRSVSPVV
Sbjct: 61  SDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPVV 120

Query: 121 FTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE 154
           F +EELKTRKR++AGR GAGGR KFAANL AIPE
Sbjct: 121 FAIEELKTRKRLSAGRSGAGGRNKFAANLTAIPE 154

[Close]

BLAST of CsGy6G026870 vs. TAIR 10
Match: AT2G23690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 183.3 bits (464), Expect = 1.4e-46
Identity = 102/164 (62.20%), Postives = 119/164 (72.56%), Query Frame = 0


Query: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSS EST VATAKLILHDG + EF+ PVKV YVLQKNP CFICNSD+MDFD+ +SAI
Sbjct: 1   MGICSSYESTQVATAKLILHDGRMMEFTSPVKVGYVLQKNPMCFICNSDDMDFDNVVSAI 60

Query: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGG---DKCGHRRRSVS 120
           + DEE QLGQLYFALPL+ L   L+AEEMAALAVKA+SALM+  G    DKC  RR+ VS
Sbjct: 61  SADEEFQLGQLYFALPLSSLHHSLKAEEMAALAVKASSALMRSGGSCGRDKCRCRRKCVS 120

Query: 121 PVVFTVEEL-------KTRKRVAAGRGGAGGRKKFAANLMAIPE 155
           PV+F+   +       +TR     G GG  GR+K+AA L  I E
Sbjct: 121 PVIFSARRVAAVGANGETRNGKRRG-GGGSGRRKYAAKLSKIEE 163

[Close]

BLAST of CsGy6G026870 vs. TAIR 10
Match: AT4G37240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 167.5 bits (423), Expect = 8.2e-42
Identity = 96/147 (65.31%), Postives = 111/147 (75.51%), Query Frame = 0


Query: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MGICSSSEST VATAKLIL DG + EF+ PVKV YVL K P CFICNSD+MDFDDA++AI
Sbjct: 1   MGICSSSESTQVATAKLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVAAI 60

Query: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120
           + DEELQLGQ+YFALPL  L+QPL+AEEMAALAVKA+SALM+  GG   G RR+ V P+V
Sbjct: 61  SADEELQLGQIYFALPLCWLRQPLKAEEMAALAVKASSALMRGGGG---GCRRKCVEPIV 120

Query: 121 FTVEELKTRKRVAAGR---GGAGGRKK 145
                 K R RV +G    G   GR+K
Sbjct: 121 SD----KLRMRVGSGDDTVGSGSGRRK 140

[Close]

BLAST of CsGy6G026870 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 145.6 bits (366), Expect = 3.3e-35
Identity = 87/161 (54.04%), Postives = 105/161 (65.22%), Query Frame = 0


Query: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MG C+S ES    +AKLIL DG+LQEFS PVKV  +LQKNP+ F+CNSDEMDFDDA+SA+
Sbjct: 1   MGACASRESLRSDSAKLILLDGTLQEFSSPVKVWQILQKNPTSFVCNSDEMDFDDAVSAV 60

Query: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120
             +EEL+ GQLYF LPL  L  PL+AEEMAALAVKA+SAL K  G         S    V
Sbjct: 61  AGNEELRSGQLYFVLPLTWLNHPLRAEEMAALAVKASSALTKSGGVGWV-----SGDDDV 120

Query: 121 FTVEELKTRKRVA-------AGRGGAGGRKKFAANLMAIPE 155
            T E+   +K +A        GRG   G+++F ANL  I E
Sbjct: 121 TTSEKTYQKKNIAGVKTNGGGGRGCGKGKRRFTANLSTIAE 156

[Close]

BLAST of CsGy6G026870 vs. TAIR 10
Match: AT3G50800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66580.1); Has 249 Blast hits to 249 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 142.1 bits (357), Expect = 3.7e-34
Identity = 84/155 (54.19%), Postives = 102/155 (65.81%), Query Frame = 0


Query: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60
           MG C+S ES    TAKLIL DG+LQEFS PVKV  +LQKNP+ F+CNSD+MDFDDA+ A+
Sbjct: 1   MGACASRESRRTETAKLILPDGTLQEFSTPVKVWQILQKNPTSFVCNSDDMDFDDAVLAV 60

Query: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120
              E+L+ G+LYF LPL  L  PL+A+EMAALAVKA+SAL K SGG    +    V    
Sbjct: 61  PGSEDLRPGELYFVLPLTWLNHPLRADEMAALAVKASSALAK-SGGGGLSYNDEDVGEC- 120

Query: 121 FTVEELKTRKRVAAGRGGAG-GRKKFAANLMAIPE 155
             V  +K       G GG G GR+KF A L +I E
Sbjct: 121 -RVRRVKRNGCGGRGCGGGGKGRRKFTAELSSIAE 152

[Close]

BLAST of CsGy6G026870 vs. TAIR 10
Match: AT1G76600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21010.1); Has 220 Blast hits to 220 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 88.2 bits (217), Expect = 6.3e-18
Identity = 65/166 (39.16%), Postives = 93/166 (56.02%), Query Frame = 0


Query: 1   MGICSSSES----TAVATAKLILHDGSLQEFSYPVKVSYVLQ----------KNPSCFIC 60
           MG+C S       ++  TAK++  +G L+E+  PV  S VL+           + S F+C
Sbjct: 1   MGLCVSVNRNEYVSSSTTAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSSSYFLC 60

Query: 61  NSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGG 120
           NSD + +DD + AI  DE LQ  Q+YF LP+++ +  L A +MAALAVKA+ A+ K +G 
Sbjct: 61  NSDSLYYDDFIPAIESDEILQANQIYFVLPISKRQYRLSASDMAALAVKASVAIEKAAG- 120

Query: 121 DKCGHRRRS--VSPVVFTVEELKTRKRVAAGRGGAGGRKKFAANLM 151
            K   RRRS  +SPVV T+ +     R+AA     GG    A N+M
Sbjct: 121 -KKNRRRRSGRISPVV-TLNQAND-NRIAAVNNRIGGE---ATNMM 159

The following BLAST results are available for this feature:

BLAST of CsGy6G026870 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G026870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141948.1	1.89e-104	100.00	uncharacterized protein LOC101203564 [Cucumis sativus] >KGN48462.1 hypothetical ...	[more]
XP_008440178.1	6.34e-103	98.05	PREDICTED: uncharacterized protein LOC103484721 [Cucumis melo] >TYK12939.1 HTH-t...	[more]
XP_038883003.1	3.53e-100	96.10	uncharacterized protein LOC120074082 [Benincasa hispida]	[more]
XP_022963140.1	2.29e-96	92.86	uncharacterized protein LOC111463438 [Cucurbita moschata]	[more]
XP_023518464.1	9.32e-96	92.86	uncharacterized protein LOC111781952 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy6G026870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJB4	9.16e-105	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G488320 PE=4 SV=1	[more]
A0A5D3CRH4	3.07e-103	98.05	HTH-type transcriptional regulator protein ptxE OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3B0H3	3.07e-103	98.05	uncharacterized protein LOC103484721 OS=Cucumis melo OX=3656 GN=LOC103484721 PE=...	[more]
A0A6J1HH54	1.11e-96	92.86	uncharacterized protein LOC111463438 OS=Cucurbita moschata OX=3662 GN=LOC1114634...	[more]
A0A6J1KPP1	4.33e-94	89.61	uncharacterized protein LOC111497150 OS=Cucurbita maxima OX=3661 GN=LOC111497150...	[more]

BLAST of CsGy6G026870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23690.1	1.4e-46	62.20	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT4G37240.1	8.2e-42	65.31	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G66580.1	3.3e-35	54.04	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT3G50800.1	3.7e-34	54.19	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G76600.1	6.3e-18	39.16	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..129 e-value: 5.1E-26 score: 92.2
None	No IPR available	PANTHER	PTHR33052:SF128	HTH-TYPE TRANSCRIPTIONAL REGULATOR	coord: 1..152
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 1..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G026870.1	CsGy6G026870.1	mRNA