CsGy6G026290 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G026290
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRNA-binding protein 39 isoform X1
LocationGy14Chr6: 25845505 .. 25853884 (-)
RNA-Seq ExpressionCsGy6G026290
SyntenyCsGy6G026290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGTTTTGGACTTAATTTGTAATACTAAAATCATCCCATTTTAGTAGTTCTCAACTGTATTTTAAAGGCATCTCAATTATACTGTTTATATTTTTGCCTCTTCATATAATGGCATTAGTAATTAGTAAATAGTAATGGTATTAAGTCACGCGTATGTATAAGTAATGGCATTGGAAGACAACGCAAAGTGAATACTAATTTTTCAATTTTACATTGGAAAATCTGATCTGTTTTCATCCATATAAAAACAACAACCCCAGTCTCCAACTCTTCACTCGCGGATTATTGTGAAGCCAAGCCAACCAATAGTTCCTCTTCCAGAAACCCCTTCAAAAAACCCTAGAATTCTCAATTCCTCGAAATTTCATCCCTAGCTTAGCTTCGCTGATTTTGTTCCAACGCGAATTCCGGCGAGATCTCAAGCTTTTCGTTTCGCGGGAAACGAATTTCTGAAGGTTCGATGGACTTCGACGAGTACGATTACTTGGAGAAAGCCGTGGAGGAGCAAGATGATAGGGAGACGAAGAAACCAAAGAGGAGCGACAGTGAGAGGAACGAGAAAAGCACCAGAAAGAGAGAGGTAGACGAGGAAGCTGGCTCCGGTGGTCGCGAGGACGAGGAGGTGAAAGTCAAGCGGTCGAGAAGCGAGCATGAAAATGGGAAGGAGGATAGGGATCACTCGGGGCGAGCGAGGGATCGGCATCGAAGAGACAGAGAGGAGGAAACAGACGGGGGAAAAGAGAGGGATAAAGAAAGGAATCGTACGAGAGAGAGGGGTAGCAGTGAGAAGGAAAGGGAGAGAGACAGGGACAGAGAGGAGAGAGATAGAGATAGACATAAGGAGAAGGAGAGGGAGAGAGACAAGGATAGAAAGGATAAGGAAAGAGATAGGGAGAGGCATAAGGAGAAGGACAGAGAGAGGGACAAGGATAGGAGGGACAAGGAGAGGGAGAGGGAGAAGGAGAAGGAGAAAGAAAGAGAGAGGAGAGACAGGGAGAGGAGGGAGCGGGAGAGGGAAGAGGAGAGATCGAGGCGAAGCCGAAGCCGGTCAGTTCGGGAGCGAGAACGTGAAGTTGATGTCAGAGAAAGCAGGTAACTGTTCATTTATGTGCCTTACGTTGAACCGGGATCTTGAAAGCTTACAGTTGACTGTTGGCTGTTGCTTCTATACGTTTATTGTCCGTCTGTTTCTTATTATTCTTGAAAATTATAGGGCAGTGTGTTTGATCAAGAAACAAACTTATCATGGAAAATGTTCAAGGATAGAGACTCCTCAGTGGATTAAAAATAACCAATCAAGCAATAAAATAAAGAAAAGATCCCAGACATTTCAAGAGCCAAAAGATAAATAAAACATTTGAGAACATGAGGGAAAATACTTAACCATGAGAGAACAACTTGAGAGGTGAGCGAGGAAAAGCAACAGAAACGGCTTCCACCAAGCACCAAACACTGCCATGCTACAGGCTAAATGGAGATTAACTGGATAACTACCCAAAACTGGATAGAAAATTTCCCTCGTGAAACAAGCCATTAACTTTCCAACCAAAATCACTCATGCACACCAAATGAGCCACACACTAATGCTTCAACAAAGCACAGAACCATAAATAAGTTAATCTGGAAAAGCCACACTTGGTTGCTAATCCTTTCCTTTTAACTTCCAAGTCCTAAACCTCTTGGAATCCATAAGGTGATCTTCACAACGGTACACACCAGCCCACCTCGTTAGTTGAGATGAAGAGTTTGAGGCATAATAAATTTTTTTATGCCTATACAAAAATTGTTTACCAACATTGTTCTTAAATTTGAATTCGTTGTATGGAATTTGTCTCGTAAATAAATTGTTGTATTAAACTTGTGGCTTTGATTAGAATCCATTTATGCTTTGGATAGAGAAGCTTGTAAATATTAGAACTAGGCTATTGGGTTGGCATTATTGATAAACCAGATATTCCATGGAAATTAGACCTCTTTCAAAACCGGTAACGGCGGTAGATTTTATTTTATTCTATTTTTACTTGTTTGAATGGAATAAACACCAGTGTTCCGTTGACGAGTGCAAAGGCTTTCTCGACAGTTACCAAATTGGTATTTTGCAGCAAATAGATTAAGAAGTTGATAAATAACCAATAATAACCAACACCATGGTGTGGAAATCCTAGAAACCCATAATTTATTTATTTTTAATTTGCTCGGGATTTTCAATAATGAAGGCACCAAAATGGAATCATAAAAGTTTGGACATCTAAGTTGTTTTTATATGTTTACTATTCACGCCCTCTTCTTAGTACAGTGCATCGGCTAAATTGCTGATATACTGCGCTGAAAGTCTTGGTGATAAAATGTTTTAATTTTATCAATAACTATCCCTTGTAATATTGAGTGGAAAGAAGAAACTGAGTCATTCTAAAATTTTTAAATATTTGTTTTTACTTTAAATAACTGTATTTTCCTTCATTTTTACCTGATATTTTGGGTGTGTGAATGGCAGGAGAATGAAGGAAAAGAAAGACACGACAGAGCCTGAAGCGGATCCAGAGAGAGATCAAAGAACTGTATTTGCTTATCAGGTTAGTGGCTTCCCTTATTTTCCTTACATTTCATGTTCGGTTTATATTTTGCTTATCATTTTTGTTATCCTACTATTCTTTGTACAGATGCCTTTGAAGGCCACAGAGAGAGATGTTTACGAATTCTTTTCAAAAGCGGGAAAGGTATTTGAAACTTATTACTCAAGCGAAACATTTGTGTATTTATTTTTTCTTTTGCTATAATTGAACAACTAAAGGTGTTAGCAATCATACAGTCATCTATATTATTTTCAGTGTCATATGCATGCCCCTTGGACCTTGTACTTGTTCACCTCTGTGGCATGTATTCTATGTGTTGTGCATTTTTGTTGCAATGTTACTGCTAGAAATGTTATGATTGCATAGATATTGAGATAGATTTGCTTCATATTGCAGTTACTGTTCCTCTGCCTTCAGTTTCGAAACTATAATCAATTTCTTCTATCTCAACATTCTATTTATATGGGGTGAGTGAAAATGTATGAGTTCTGTCGTCATCTCACTGATGGCTGAATGGCTCTTTGCCTCGAGTGTAAAGAATAGAAACCTTCATTACTTCTTCATTGCTGGCTTCCTAAAACAACCTGTTTTCATTGTTCTTTCTATTTTCAGGTGAGAGATGTCCGGCTGATCATGGACAGAAATTCTAGACGGTCAAAAGGAGTTGGGTATGTGGTCTTGAGCGAGCAATTTTTGTATCGTATGCTTGTGATCTTGTTAATATGGTTATTAACATAGTAGTTTTCAAGTATCAAATTTAACTGTATTTTTAAATGAACTAGCAATGCGATAATGATGAGGGATGGTGGGAATACAATGCAGTCATGTTTAATCAATTCATGCTGCTTGTTCAAGGTAGATAACATAAACCTGAGGTTTCCTTTGTTGTTTTCCCCATCGTACTCCTAATTTTGCTCCTCTATGTTTTTGTGCAGATAAGAAACAGTCCTAACTCCTATGACTCTGTTATCTCTGGTCTTGGTTTTAGAATCATTTCTTTCTATTATGAAATTTTCTTGGTTCGAATTAACTTTTAAAGATTGTTTTATTACACTGTATTAAAATGAACATGCTTGGCTGGGTATCATCTACTTTCATTGTTTCTTTTTCCTGAAAAGTTGAAGAAATTGAGAAAGTTTGTTTTCTGTGGCATCTTGACTTCCCCATTGTGTTTACTGTGGACTAATATATATATATATTAAATTATTACTATAAAACACTGTCCAATTTTTAAACATGGAAATATGCTCATTGAAAAAATTAGAAAGGGTGATGAATAGTTACCCTACTTCTCGTCTAAGCTGGTCATCTGGTATTTGGTTATGTGTTGCTTCTTCATTTGATGAACTGATCTGACCATTAAATCAGTTGGAAGAAACTAAGAGGTCTCCGTGTATTTATTTATGCTTTGTCAATTTTGCTGCTTATTTTTGCCGTCTCATATTCTAATAAGTTTACTGTGAGGCATTGATTAAACTGCAGGTATGTTGAGTTTTATGATGCGATGTCTGTGCCTATGGCTATTGCTCTCTCTGGTCAACTACTTCTTGGGCAACCTGTAATGGTTAAACCTTCGGAGGCTGAGAAGAATCTTGTTCAATCAAATACAACTGGGGCCTCTGGTGCAGGTCCATATGGAGCAGTAGACAGGAAACTATATGTTGGAAATCTACACTTTAATATGACAGAAACTCACCTTCGAGAGGTACTAAGATCAATTAATCTGTGGAATTTTGTTTCAAGACGCTCATATTTGATTTCATCTCATATGCTGTTATTTTCTATACAAGTGACAACTATAGGATTCCATGAATAATAGGCCTATCGATGATTTAGAATTATTTGCTATGGCTCTTAAGTAACTGTAGCATTGTAACCTTTTGGCTCCGGTAGTTATTCCCTTTCGTTCAGATAGGTTTCACAGGAAATGACAGCCCAACTTGCCAAGGACAAACTTGTGAGGGCCATCCATCTCTCTGTAGAATCTGTTAATTACACAGAAAATGCACCTGTATCCTAGTTTTCAGAAAACACAGCATTCACTACATGTAAAGAAGATTCAGAACCAACTTAACTTCCCCATTTAAAATGTTCAAACAAGGAAATTAACTTCCCTAATCAAAATATTCAAACAAGGAAACCTAAGACTGACTTCTAAATATAGAAACAGGAAACAGCTACATTTCCATGTTTTCATTCATTGAATAAATTTTCTGGATTGGAAGTCTAACAGATCATCACTTCTTTTCTGATTAGATTTTTGAAGCATTTGGTCCTGTGGAGCTTGTGCAGTTACCTCTTGACCTTGAGTCCGGTCACTGTAAGGGTTTTGGATTTGTTCAAGTGGGTAATCATTTATTATCAACTTTTTCAAGTTTTTGATGATGTATCGTATCCATAGATTCGTAAGGCTCTGTCTTAATTTTTTGAATTCTTTCCAGTTTGCCCATCTAGAGCATGCAAAGGCTGCACAAAGCTTGAATGGGAAATTAGAAATTGCTGGCCGAACCATCAAGGTAGTGTTCTACTAGAACCTTTCAGATTTGACTTATGTTCAGTACTGATATTTTTATTTCTTATTAGTGCCTCTAAGGAATGATGGTGTCCTTGGTTTTGTGTGTTCTAAATAATGCTCTGTTTGTGCAGGTTTCATCTGTAACGGATCACATTGGAGCACAAGAGAGCGTTGCAAAATCAAACGACCTTGATGATGATGAAGGAGGCGGTCTGGTTGGTGTATAGTTTTCTTTTATGATTAAATAAATGTCTTTTTACAATTCTTTTAGCATGTTTTCTTTTTAGCACAAGAATTTGGTTTTTACTATAGTTGATGTTTGAAAATATTTAATGTGGCTGTCTCATAAGTGATTATCTCGTGTTTAAAGTATATTGCCCTTGTAATAATGATATAAAATTTGAAGACATTTTTGCTTTCAATTATGGAGACTAGGTGAGTTTCCTTTGTGTGAGCACCTACCATGAGTGTGTGCTTATAGCAACATTGCAATGGCCTGTCATCGTTTTAAATAATTGCAATGACTTTCCTCTCCATCTTCCCATCTTCCTATCATAATATAATTGCCCTTGGTGTTAGGTAATTCTTGTTTTATATAGGAGAAAAGAAGAAATGAAAAATGAGACTATTGACATCAGATTATGATCATGTGTCATATCATTTATTTGATGACTGTTGAACTGTGTGGCTGAATTTTCTCTTTATTCTCTTCCAACTATAGAGTGCTTGTACGTTTCATTACATTTATTAACATATTAATTTTCTGAAGAATTGATTGCTAATTGAAATGTCTAATTGCAGGCATTGAATGCTCAATCAAGAGCTCTGCTTATGCAGAAGCTTGACCGCACTGGCATTGCTACTAGGTTTGTCTCCCTTTTGGCATGATTAAGTAGCAGGATGTCCTAACTTTCCTCTGTAGTCGTTAGTGCGCTTATATCTTCTTTGGATGTATTTGTATTCTGTAAGAAAGAAATATTGGATCAATGGAAGTTAACTTTTTCATGGTTATTGCTTCATGGTTTCAGTATTGCAGGATCTCTTGGAGCTCCAGTGTTGAATGGGTCAGCCCCAAATCAGAGATCTACGAGCTTGCCTGTAAATGGTCAAGCTGCAGTTGCTGCACCAGTACTTCCGGCGAATTTTACTCCACCTGTTTTACAATCTGTTGGCAGTCCTAGTGAATGTTTACTATTGAAAAACATGTTTGATCCTTCGACGGAGGTACTGAGTACTTGTATTTTCTGTTTTCATCTTTCAAGCTGGATTATTTATTAGATGAATCATCTTGCAGACAGCACCAGATTTTGACATGGAGATCAAAGAAGATGTTGAAGAGGAGTGTTCTAAATACGGCCGCGTTAAACATATATATGTGGATAAGTGAGTATTTTTCTTGTCCCCATAATCATATTATATCTGGTCATATTATTGGAGAGGAGTTTTCTAAATACGGTCACGTTAAACATATATATGTGGATAACTGAGTATTTTTCTGTCCCCGTAATCATATCAATCATTTCTGGTCATATTATCAAGTGAAACTTTATTTATTTTTTGGTTCAAACTTATATTTCTGCTTTCTTTTTAAGTTACTCATATATTTCTACAACACTTAAAACAGGATGTTTCCTGTTCACATCTTTCTTGAATTTGTTCTGTTACGTGTTGGGGATTGACTTGGATCTTTGATCCTCATTTGCAGATACTTCCGGAATAGGGATGGAAAAAAATTACTAATGCCTTCATGGATGGGAGAATCTTATTTTCCCTATTTAATTTTAGGCTGGTTATGGAAAGGGCTATCTTATGCTGACATTAGCCTTTGTCATGCATTATCACAAATTTATAACTATACTTGAATGACAACATTTTCCATTTAGTTTATACACAGCCAGATTAGTTATTTAACTAGAACTAGTTGTAGTAATGATCGAACATTTAGATGGTACTTAAATTATTTGGACTTTTACATGGTTAGCTAATGATGGTTCGGGAAACTTACACTTTCTCACTGCAGCCCCACTGTCAATATATCTAGAAGTTAAAAGTTTAGGAATTTAAATAATATGCAGTTATTGCTTCCATAAAAAGAATGCAATTATTGTTAGGCTCATCATTTTATGTTGATGGTACTTGAATTAACGGAGAAGAGAGAGGGCAGGTAAAGGTAGGGGGGATAGTGTAGGGAATTGCTCTTACACTTCATGCATTTGCTAACGTATTAAGACTCCATTTGATAACTGTTGCGTTAAAAGTTTTAAGTTTTTGAAATCTACCTTCATCTTTGTATTTCTATATTATGTTCACTTTCTACTAATGTTTTCGAAAACTAAATGGGCAGCTTTTTAAATATAGTTTTTACTTTTAGATTTTGACTGAGAATTCAAATTTCTTTATAACAGTGTCATTAAATTGGGAGAAAACCTCTGAACCATAAGTGATGCTCTCTCCACCTTTATATCAGAGAACGAATCTTTCGATTACGTGATCAAATAGATGTTTGTTCTATCTTTTCATCGTTTTTCTTTTTCTTTTATTATTTTTCAATGTGCAGAAATAGCGCGGGATGTGTGTATCTGCAGTATGATACCGTGGAAGCGGCCATAAATGCTCAACGTGCAATGCACCTGAGATGGTTTGCAGGCAGACAGATATCTGTCTTGTTCATGGTTAGTTATTAACAAGAAATTGTGCTCTCTTGATTTATTTCTTTTGAAACTCGTTTCCTTTTGTTGGTCCTCAGTTTCTGCTTCTCAATATCATGTTGTTCTGTCTTGCAGCAACCGCAGGTGTATGAAGCTAAGTTTATAGGAGCTTGAATGCCGTCTGTGGTTCTTGTCACTTACGAGTAATCAGGAGATTCCTCTAGCCAATCCGTGCTCTATATTTTCTCGGGTGACATCCCATCCTGTCCCGTTCGGTCAATGTCTAATGTCTTCTCCTTTCTGTAATAGGTGGTTATAGAAGTACTGGTTAAAATTGGGTCAATTGTCTTAATAGAAAAGTAAAACGTTGGGTTCTTTTCATATGGGGGAGGATATTGGTACCTATTCTTAATTTCCTGCTTTGTAACACCCAGTGTCAAGCGAATACTTTTTGTTGGCTTGGATGCATTTAGTGTTGACTTCTTATGAACATTCCTCTTGTAATGCATTTTGTACAAGTTTTCCAGAAATTAGTAAACATTTCTTTGGAGTTGGGTTTTCTTGCATCTACAAGACTCATTTCTTCCAGTAAATCATTCTGAAGCCTTTAATTTATGCAATATTTTTCCATGTTTGTAAAAGGC

mRNA sequence

AGGTTTTGGACTTAATTTGTAATACTAAAATCATCCCATTTTAGTAGTTCTCAACTGTATTTTAAAGGCATCTCAATTATACTGTTTATATTTTTGCCTCTTCATATAATGGCATTAGTAATTAGTAAATAGTAATGGTATTAAGTCACGCGTATGTATAAGTAATGGCATTGGAAGACAACGCAAAGTGAATACTAATTTTTCAATTTTACATTGGAAAATCTGATCTGTTTTCATCCATATAAAAACAACAACCCCAGTCTCCAACTCTTCACTCGCGGATTATTGTGAAGCCAAGCCAACCAATAGTTCCTCTTCCAGAAACCCCTTCAAAAAACCCTAGAATTCTCAATTCCTCGAAATTTCATCCCTAGCTTAGCTTCGCTGATTTTGTTCCAACGCGAATTCCGGCGAGATCTCAAGCTTTTCGTTTCGCGGGAAACGAATTTCTGAAGGTTCGATGGACTTCGACGAGTACGATTACTTGGAGAAAGCCGTGGAGGAGCAAGATGATAGGGAGACGAAGAAACCAAAGAGGAGCGACAGTGAGAGGAACGAGAAAAGCACCAGAAAGAGAGAGGTAGACGAGGAAGCTGGCTCCGGTGGTCGCGAGGACGAGGAGGTGAAAGTCAAGCGGTCGAGAAGCGAGCATGAAAATGGGAAGGAGGATAGGGATCACTCGGGGCGAGCGAGGGATCGGCATCGAAGAGACAGAGAGGAGGAAACAGACGGGGGAAAAGAGAGGGATAAAGAAAGGAATCGTACGAGAGAGAGGGGTAGCAGTGAGAAGGAAAGGGAGAGAGACAGGGACAGAGAGGAGAGAGATAGAGATAGACATAAGGAGAAGGAGAGGGAGAGAGACAAGGATAGAAAGGATAAGGAAAGAGATAGGGAGAGGCATAAGGAGAAGGACAGAGAGAGGGACAAGGATAGGAGGGACAAGGAGAGGGAGAGGGAGAAGGAGAAGGAGAAAGAAAGAGAGAGGAGAGACAGGGAGAGGAGGGAGCGGGAGAGGGAAGAGGAGAGATCGAGGCGAAGCCGAAGCCGGTCAGTTCGGGAGCGAGAACGTGAAGTTGATGTCAGAGAAAGCAGGAGAATGAAGGAAAAGAAAGACACGACAGAGCCTGAAGCGGATCCAGAGAGAGATCAAAGAACTGTATTTGCTTATCAGATGCCTTTGAAGGCCACAGAGAGAGATGTTTACGAATTCTTTTCAAAAGCGGGAAAGGTGAGAGATGTCCGGCTGATCATGGACAGAAATTCTAGACGGTCAAAAGGAGTTGGGTATGTTGAGTTTTATGATGCGATGTCTGTGCCTATGGCTATTGCTCTCTCTGGTCAACTACTTCTTGGGCAACCTGTAATGGTTAAACCTTCGGAGGCTGAGAAGAATCTTGTTCAATCAAATACAACTGGGGCCTCTGGTGCAGGTCCATATGGAGCAGTAGACAGGAAACTATATGTTGGAAATCTACACTTTAATATGACAGAAACTCACCTTCGAGAGATTTTTGAAGCATTTGGTCCTGTGGAGCTTGTGCAGTTACCTCTTGACCTTGAGTCCGGTCACTGTAAGGGTTTTGGATTTGTTCAATTTGCCCATCTAGAGCATGCAAAGGCTGCACAAAGCTTGAATGGGAAATTAGAAATTGCTGGCCGAACCATCAAGGTTTCATCTGTAACGGATCACATTGGAGCACAAGAGAGCGTTGCAAAATCAAACGACCTTGATGATGATGAAGGAGGCGGTCTGGCATTGAATGCTCAATCAAGAGCTCTGCTTATGCAGAAGCTTGACCGCACTGGCATTGCTACTAGTATTGCAGGATCTCTTGGAGCTCCAGTGTTGAATGGGTCAGCCCCAAATCAGAGATCTACGAGCTTGCCTGTAAATGGTCAAGCTGCAGTTGCTGCACCAGTACTTCCGGCGAATTTTACTCCACCTGTTTTACAATCTGTTGGCAGTCCTAGTGAATGTTTACTATTGAAAAACATGTTTGATCCTTCGACGGAGACAGCACCAGATTTTGACATGGAGATCAAAGAAGATGTTGAAGAGGAGTGTTCTAAATACGGCCGCGTTAAACATATATATGTGGATAAATACTTCCGGAATAGGGATGGAAAAAAATTACTAATGCCTTCATGGATGGGAGAATCTTATTTTCCCTATTTAATTTTAGGCTGGTTATGGAAAGGGCTATCTTATGCTGACATTAGCCTTTGTCATGCATTATCACAAATTTATAACTATACTTGAATGACAACATTTTCCATTTAGTTTATACACAGCCAGATTAGTTATTTAACTAGAACTAGTTGTAGTAATGATCGAACATTTAGATGGTACTTAAATTATTTGGACTTTTACATGGTTAGCTAATGATGGTTCGGGAAACTTACACTTTCTCACTGCAGCCCCACTGTCAATATATCTAGAAGTTAAAAGTTTAGGAATTTAAATAATATGCAGTTATTGCTTCCATAAAAAGAATGCAATTATTGTTAGGCTCATCATTTTATGTTGATGGTACTTGAATTAACGGAGAAGAGAGAGGGCAGGTAAAGGTAGGGGGGATAGTGTAGGGAATTGCTCTTACACTTCATGCATTTGCTAACGTATTAAGACTCCATTTGATAACTGTTGCGTTAAAAGTTTTAAGTTTTTGAAATCTACCTTCATCTTTGTATTTCTATATTATGTTCACTTTCTACTAATGTTTTCGAAAACTAAATGGGCAGCTTTTTAAATATAGTTTTTACTTTTAGATTTTGACTGAGAATTCAAATTTCTTTATAACAGTGTCATTAAATTGGGAGAAAACCTCTGAACCATAAGTGATGCTCTCTCCACCTTTATATCAGAGAACGAATCTTTCGATTACGTGATCAAATAGATGTTTGTTCTATCTTTTCATCGTTTTTCTTTTTCTTTTATTATTTTTCAATGTGCAGAAATAGCGCGGGATGTGTGTATCTGCAGTATGATACCGTGGAAGCGGCCATAAATGCTCAACGTGCAATGCACCTGAGATGGTTTGCAGGCAGACAGATATCTGTCTTGTTCATGCAACCGCAGGTGTATGAAGCTAAGTTTATAGGAGCTTGAATGCCGTCTGTGGTTCTTGTCACTTACGAGTAATCAGGAGATTCCTCTAGCCAATCCGTGCTCTATATTTTCTCGGGTGACATCCCATCCTGTCCCGTTCGGTCAATGTCTAATGTCTTCTCCTTTCTGTAATAGGTGGTTATAGAAGTACTGGTTAAAATTGGGTCAATTGTCTTAATAGAAAAGTAAAACGTTGGGTTCTTTTCATATGGGGGAGGATATTGGTACCTATTCTTAATTTCCTGCTTTGTAACACCCAGTGTCAAGCGAATACTTTTTGTTGGCTTGGATGCATTTAGTGTTGACTTCTTATGAACATTCCTCTTGTAATGCATTTTGTACAAGTTTTCCAGAAATTAGTAAACATTTCTTTGGAGTTGGGTTTTCTTGCATCTACAAGACTCATTTCTTCCAGTAAATCATTCTGAAGCCTTTAATTTATGCAATATTTTTCCATGTTTGTAAAAGGC

Coding sequence (CDS)

ATGGACTTCGACGAGTACGATTACTTGGAGAAAGCCGTGGAGGAGCAAGATGATAGGGAGACGAAGAAACCAAAGAGGAGCGACAGTGAGAGGAACGAGAAAAGCACCAGAAAGAGAGAGGTAGACGAGGAAGCTGGCTCCGGTGGTCGCGAGGACGAGGAGGTGAAAGTCAAGCGGTCGAGAAGCGAGCATGAAAATGGGAAGGAGGATAGGGATCACTCGGGGCGAGCGAGGGATCGGCATCGAAGAGACAGAGAGGAGGAAACAGACGGGGGAAAAGAGAGGGATAAAGAAAGGAATCGTACGAGAGAGAGGGGTAGCAGTGAGAAGGAAAGGGAGAGAGACAGGGACAGAGAGGAGAGAGATAGAGATAGACATAAGGAGAAGGAGAGGGAGAGAGACAAGGATAGAAAGGATAAGGAAAGAGATAGGGAGAGGCATAAGGAGAAGGACAGAGAGAGGGACAAGGATAGGAGGGACAAGGAGAGGGAGAGGGAGAAGGAGAAGGAGAAAGAAAGAGAGAGGAGAGACAGGGAGAGGAGGGAGCGGGAGAGGGAAGAGGAGAGATCGAGGCGAAGCCGAAGCCGGTCAGTTCGGGAGCGAGAACGTGAAGTTGATGTCAGAGAAAGCAGGAGAATGAAGGAAAAGAAAGACACGACAGAGCCTGAAGCGGATCCAGAGAGAGATCAAAGAACTGTATTTGCTTATCAGATGCCTTTGAAGGCCACAGAGAGAGATGTTTACGAATTCTTTTCAAAAGCGGGAAAGGTGAGAGATGTCCGGCTGATCATGGACAGAAATTCTAGACGGTCAAAAGGAGTTGGGTATGTTGAGTTTTATGATGCGATGTCTGTGCCTATGGCTATTGCTCTCTCTGGTCAACTACTTCTTGGGCAACCTGTAATGGTTAAACCTTCGGAGGCTGAGAAGAATCTTGTTCAATCAAATACAACTGGGGCCTCTGGTGCAGGTCCATATGGAGCAGTAGACAGGAAACTATATGTTGGAAATCTACACTTTAATATGACAGAAACTCACCTTCGAGAGATTTTTGAAGCATTTGGTCCTGTGGAGCTTGTGCAGTTACCTCTTGACCTTGAGTCCGGTCACTGTAAGGGTTTTGGATTTGTTCAATTTGCCCATCTAGAGCATGCAAAGGCTGCACAAAGCTTGAATGGGAAATTAGAAATTGCTGGCCGAACCATCAAGGTTTCATCTGTAACGGATCACATTGGAGCACAAGAGAGCGTTGCAAAATCAAACGACCTTGATGATGATGAAGGAGGCGGTCTGGCATTGAATGCTCAATCAAGAGCTCTGCTTATGCAGAAGCTTGACCGCACTGGCATTGCTACTAGTATTGCAGGATCTCTTGGAGCTCCAGTGTTGAATGGGTCAGCCCCAAATCAGAGATCTACGAGCTTGCCTGTAAATGGTCAAGCTGCAGTTGCTGCACCAGTACTTCCGGCGAATTTTACTCCACCTGTTTTACAATCTGTTGGCAGTCCTAGTGAATGTTTACTATTGAAAAACATGTTTGATCCTTCGACGGAGACAGCACCAGATTTTGACATGGAGATCAAAGAAGATGTTGAAGAGGAGTGTTCTAAATACGGCCGCGTTAAACATATATATGTGGATAAATACTTCCGGAATAGGGATGGAAAAAAATTACTAATGCCTTCATGGATGGGAGAATCTTATTTTCCCTATTTAATTTTAGGCTGGTTATGGAAAGGGCTATCTTATGCTGACATTAGCCTTTGTCATGCATTATCACAAATTTATAACTATACTTGA

Protein sequence

MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRSRSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDREERDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERERRDRERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGRVKHIYVDKYFRNRDGKKLLMPSWMGESYFPYLILGWLWKGLSYADISLCHALSQIYNYT*
Homology
[Close]
BLAST of CsGy6G026290 vs. ExPASy Swiss-Prot
Match: Q5RC80 (RNA-binding protein 39 OS=Pongo abelii OX=9601 GN=RBM39 PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.4e-46
Identity = 196/481 (40.75%), Postives = 260/481 (54.05%), Query Frame = 0 

Query: 97  KERNRTRERGSSEKERERDRDREERDRDRHKEKERERDKDRKDKERDRERHKEKDRERDK 156
           K+ N+       E ER + R ++ + R R  E++R + K+RK + RDRER K K RER K
Sbjct: 17  KDENKLSSANGHE-ERSKKR-KKSKSRSRSHERKRSKSKERK-RSRDRERKKSKSRER-K 76

Query: 157 DRRDKEREREKEKEKERERRDRERREREREEERS----------------RRSRSRSVRE 216
             R KER R + + ++R  R R R      +  S                RRSRS+S   
Sbjct: 77  RSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRSRSKSPFR 136

Query: 217 REREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDV 276
           +++         ++E  D   PE   ERD RTVF  Q+  +   RD+ EFFS  GKVRDV
Sbjct: 137 KDKS-------PVREPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDV 196

Query: 277 RLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTT 336
           R+I DRNSRRSKG+ YVEF D  SVP+AI L+GQ +LG P++V+ S+AEKN     +N  
Sbjct: 197 RMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNL 256

Query: 337 GASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQ 396
               AGP      +LYVG+LHFN+TE  LR IFE FG +E +QL +D E+G  KG+GF+ 
Sbjct: 257 QKGSAGP-----MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFIT 316

Query: 397 FAHLEHA-KAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKSNDLDDDEGGGLALNAQS 456
           F+  E A KA + LNG  E+AGR +KV  VT+   A  S +   D D+ E  G+ L    
Sbjct: 317 FSDSECAKKALEQLNG-FELAGRPMKVGHVTERTDA-SSASSFLDSDELERTGIDLGTTG 376

Query: 457 RALLMQKL-DRTGI--------ATSIAGSLGAPVLNGSAPNQRSTSLPVNGQA-AVAAPV 516
           R  LM +L + TG+        A  ++GSL        A  Q   S      A A AA V
Sbjct: 377 RLQLMARLAEGTGLQIPPAAQQALQMSGSL---AFGAVADLQTRLSQQTEASALAAAASV 436

Query: 517 LPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGRVKHIYVD 549
            P              ++C  L NMF+P TE    +D EIK+DV EEC+K+G V HIYVD
Sbjct: 437 QPL------------ATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVD 461

[Close]
BLAST of CsGy6G026290 vs. ExPASy Swiss-Prot
Match: Q8VH51 (RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=2)

HSP 1 Score: 188.0 bits (476), Expect = 3.2e-46
Identity = 197/484 (40.70%), Postives = 262/484 (54.13%), Query Frame = 0 

Query: 97  KERNRTRERGSSEKERERDRDREERDRDRHKEKERERDKDRKDKERDRERHKEKDRERDK 156
           K+ N+       E ER + R ++ + R R  E++R + K+RK + RDRER K K RER K
Sbjct: 17  KDENKLNSANGHE-ERSKKR-KKSKSRSRSHERKRSKSKERK-RSRDRERKKSKSRER-K 76

Query: 157 DRRDKEREREKEKEKERERRDRERREREREEERS----------------RRSRSRSVRE 216
             R KER R + + ++R  R R R      +  S                RRSRS+S   
Sbjct: 77  RSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRSRSKSPFR 136

Query: 217 REREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDV 276
           +++         ++E  D   PE   ERD RTVF  Q+  +   RD+ EFFS  GKVRDV
Sbjct: 137 KDKS-------PVREPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDV 196

Query: 277 RLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTT 336
           R+I DRNSRRSKG+ YVEF D  SVP+AI L+GQ +LG P++V+ S+AEKN     +N  
Sbjct: 197 RMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNL 256

Query: 337 GASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQ 396
               AGP      +LYVG+LHFN+TE  LR IFE FG +E +QL +D E+G  KG+GF+ 
Sbjct: 257 QKGSAGP-----MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFIT 316

Query: 397 FAHLEHA-KAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKSNDLDDDEGGGLALNAQS 456
           F+  E A KA + LNG  E+AGR +KV  VT+   A  S +   D D+ E  G+ L    
Sbjct: 317 FSDSECAKKALEQLNG-FELAGRPMKVGHVTERTDA-SSASSFLDSDELERTGIDLGTTG 376

Query: 457 RALLMQKL-DRTGI--------ATSIAGSLG-APVLNGSAPNQRSTSLPVNGQA---AVA 516
           R  LM +L + TG+        A  ++GSL    V   S      T L    +A   A A
Sbjct: 377 RLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAA 436

Query: 517 APVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGRVKHI 549
           A V P              ++C  L NMF+P TE    +D EIK+DV EEC+K+G V HI
Sbjct: 437 ASVQPL------------ATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHI 467

[Close]
BLAST of CsGy6G026290 vs. ExPASy Swiss-Prot
Match: Q14498 (RNA-binding protein 39 OS=Homo sapiens OX=9606 GN=RBM39 PE=1 SV=2)

HSP 1 Score: 187.6 bits (475), Expect = 4.2e-46
Identity = 197/484 (40.70%), Postives = 262/484 (54.13%), Query Frame = 0 

Query: 97  KERNRTRERGSSEKERERDRDREERDRDRHKEKERERDKDRKDKERDRERHKEKDRERDK 156
           K+ N+       E ER + R ++ + R R  E++R + K+RK + RDRER K K RER K
Sbjct: 17  KDENKLSSANGHE-ERSKKR-KKSKSRSRSHERKRSKSKERK-RSRDRERKKSKSRER-K 76

Query: 157 DRRDKEREREKEKEKERERRDRERREREREEERS----------------RRSRSRSVRE 216
             R KER R + + ++R  R R R      +  S                RRSRS+S   
Sbjct: 77  RSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRSRSKSPFR 136

Query: 217 REREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDV 276
           +++         ++E  D   PE   ERD RTVF  Q+  +   RD+ EFFS  GKVRDV
Sbjct: 137 KDKS-------PVREPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDV 196

Query: 277 RLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTT 336
           R+I DRNSRRSKG+ YVEF D  SVP+AI L+GQ +LG P++V+ S+AEKN     +N  
Sbjct: 197 RMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNL 256

Query: 337 GASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQ 396
               AGP      +LYVG+LHFN+TE  LR IFE FG +E +QL +D E+G  KG+GF+ 
Sbjct: 257 QKGSAGP-----MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFIT 316

Query: 397 FAHLEHA-KAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKSNDLDDDEGGGLALNAQS 456
           F+  E A KA + LNG  E+AGR +KV  VT+   A  S +   D D+ E  G+ L    
Sbjct: 317 FSDSECAKKALEQLNG-FELAGRPMKVGHVTERTDA-SSASSFLDSDELERTGIDLGTTG 376

Query: 457 RALLMQKL-DRTGI--------ATSIAGSLG-APVLNGSAPNQRSTSLPVNGQA---AVA 516
           R  LM +L + TG+        A  ++GSL    V   S      T L    +A   A A
Sbjct: 377 RLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAA 436

Query: 517 APVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGRVKHI 549
           A V P              ++C  L NMF+P TE    +D EIK+DV EEC+K+G V HI
Sbjct: 437 ASVQPL------------ATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHI 467

[Close]
BLAST of CsGy6G026290 vs. ExPASy Swiss-Prot
Match: Q86U06 (Probable RNA-binding protein 23 OS=Homo sapiens OX=9606 GN=RBM23 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.7e-26
Identity = 153/446 (34.30%), Postives = 232/446 (52.02%), Query Frame = 0 

Query: 81  HRRDREEETDGGKERDKERNRTRERGSSEKERE-----RDRDREERDRDRHKEKERERDK 140
           ++++ +E+     ++D   N T    +S  E        +  +++R R  +K ++R+R +
Sbjct: 18  YKKEEDEQQRKEVKKDYPSNTTSSTSNSGNETSGSSTIGETSKKKRSRSHNKSRDRKRSR 77

Query: 141 DRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERERRDRERREREREEERSRRSRS 200
            R   +RDR R +   R R   R+ + R R  ++    E R R+ R  +R   RS    +
Sbjct: 78  SR---DRDRYR-RRNSRSRSPGRQCRHRSRSWDRRHGSESRSRDHRREDRVHYRSPPLAT 137

Query: 201 RSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAG 260
                  +    RE   ++E  D   PE   ERD RTVF  Q+  +   RD+ +FFS  G
Sbjct: 138 GYRYGHSKSPHFREKSPVREPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVG 197

Query: 261 KVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LV 320
           KVRDVR+I DRNSRRSKG+ YVEF +  SVP+AI L+GQ LLG P++V+ S+AEKN    
Sbjct: 198 KVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA 257

Query: 321 QSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKG 380
            +N       GP      +LYVG+LHFN+TE  LR IFE FG ++ + L  D ++G  KG
Sbjct: 258 MANNLQKGNGGP-----MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKG 317

Query: 381 FGFVQFAHLEHA-KAAQSLNGKLEIAGRTIKVSSVTDHI-GAQESVAKSNDLDDDEGGGL 440
           +GF+ F+  E A +A + LNG  E+AGR ++V  VT+ + G  +      D + D G   
Sbjct: 318 YGFITFSDSECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG--- 377

Query: 441 ALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQAAVAAPVLPAN 500
             +A  R  LM KL     A      L +     +A   ++ +L +NG   + A + PA 
Sbjct: 378 --SAGGRFQLMAKL-----AEGAGIQLPSTAAAAAAAAAQAAALQLNGAVPLGA-LNPAA 437

Query: 501 FTPPVLQSVGSPSECLLLKNMFDPST 518
            T  +  ++   S+C  L ++F P T
Sbjct: 438 LT-ALSPALNLASQCFQLSSLFTPQT 438

[Close]
BLAST of CsGy6G026290 vs. ExPASy Swiss-Prot
Match: O13845 (RNA-binding protein rsd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rsd1 PE=1 SV=2)

HSP 1 Score: 108.2 bits (269), Expect = 3.2e-22
Identity = 162/505 (32.08%), Postives = 239/505 (47.33%), Query Frame = 0 

Query: 58  KRSRSEHENGKED----RDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERE 117
           K+S    ++G  D       S R    HRR     +D G       +      S    R 
Sbjct: 89  KQSFQREDSGYNDDVVTNSSSHRTPRHHRRSYSPRSDYGSRSPSPHSSVDSHQSRSPVRS 148

Query: 118 RDRDREER-DRDRHKEKERERDKDRKDKERDRERHKEKDRERD---KDRRDKEREREKEK 177
           RDRDR  R  R RH                 R RH+  D  R      R  + R R +E+
Sbjct: 149 RDRDRSSRSSRSRHPS--------------SRSRHRYDDYSRSPPYSSRHSRSRRRYEER 208

Query: 178 EKERERRDRERREREREEERS-RRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPER 237
                R      E  R+++RS  R RSRS R RER      S ++ E+          ER
Sbjct: 209 SSRSSRAHDYDYEDLRDDDRSHERKRSRS-RPRER------SSKLSEE----------ER 268

Query: 238 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMA 297
           D+RTVF  Q+  + T R++Y+FF +AG VRD +++ D+ S RSKGV YVEF    SV  A
Sbjct: 269 DRRTVFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAA 328

Query: 298 IALSGQLLLGQPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLR 357
           IALSG+ LLG PV+V+ +EAEKN         + A        +L V N+HFN+T+  ++
Sbjct: 329 IALSGKRLLGLPVIVQLTEAEKNRKAREAAELARAASAEIPFHRLCVSNIHFNLTDEDVK 388

Query: 358 EIFEAFGPVELVQLPLDLESGHCKGFGFVQFAH-LEHAKAAQSLNGKLEIAGRTIKVSSV 417
            IFE FG +E V L  D +    KGFG++Q+ + +    A + +NG  ++AGR ++V   
Sbjct: 389 AIFEPFGDIEFVHLQRD-DQNRSKGFGYIQYRNPISARNALEKMNG-FDLAGRNMRVCLG 448

Query: 418 TDHIGAQESVAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSA 477
            D    + + +     D+       L  Q R+   Q+   +    S      AP+     
Sbjct: 449 NDKFTTETTSSMLKRFDE------TLARQERSQPSQRNGGSSTYESQDYREAAPLSPTEE 508

Query: 478 PNQRSTSLPVNGQAAVAAPV-----LPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPD 537
            ++  T   +  + A +  +     L +   PP+       S C LL+NMF+P+ ET+P+
Sbjct: 509 ESRPITRDELMKKLARSEDISDNSKLVSEPEPPI------RSRCALLENMFNPAEETSPN 548

Query: 538 FDMEIKEDVEEEC-SKYGRVKHIYV 547
           +  E+++DV+EEC  KYG+V HI V
Sbjct: 569 WVQELEQDVKEECDEKYGKVVHIAV 548

[Close]
BLAST of CsGy6G026290 vs. NCBI nr
Match: XP_011657783.1 (RNA-binding protein 39 isoform X2 [Cucumis sativus])

HSP 1 Score: 1071 bits (2769), Expect = 0.0
Identity = 599/599 (100.00%), Postives = 599/599 (100.00%), Query Frame = 0 

Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDREE 120
           RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDREE
Sbjct: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDREE 120

Query: 121 RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERERRDRER 180
           RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERERRDRER
Sbjct: 121 RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERERRDRER 180

Query: 181 REREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPL 240
           REREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPL
Sbjct: 181 REREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPL 240

Query: 241 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP 300
           KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP
Sbjct: 241 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP 300

Query: 301 VMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV 360
           VMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV
Sbjct: 301 VMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV 360

Query: 361 QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS 420
           QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS
Sbjct: 361 QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS 420

Query: 421 NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQ 480
           NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQ
Sbjct: 421 NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQ 480

Query: 481 AAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGR 540
           AAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGR
Sbjct: 481 AAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGR 540

Query: 541 VKHIYVDKYFRNRDGKKLLMPSWMGESYFPYLILGWLWKGLSYADISLCHALSQIYNYT 599
           VKHIYVDKYFRNRDGKKLLMPSWMGESYFPYLILGWLWKGLSYADISLCHALSQIYNYT
Sbjct: 541 VKHIYVDKYFRNRDGKKLLMPSWMGESYFPYLILGWLWKGLSYADISLCHALSQIYNYT 599

[Close]
BLAST of CsGy6G026290 vs. NCBI nr
Match: XP_008440992.1 (PREDICTED: RNA-binding protein 39 isoform X3 [Cucumis melo])

HSP 1 Score: 1052 bits (2720), Expect = 0.0
Identity = 588/599 (98.16%), Postives = 595/599 (99.33%), Query Frame = 0 

Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVEEQDDRETKKPKRS+SERNEKSTRKREVDEEAGSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSESERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDREE 120
           RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKER+RDRDREE
Sbjct: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120

Query: 121 RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERERRDRER 180
           RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKE+ERE+EKEKERERRDRER
Sbjct: 121 RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEKEREREKEKERERRDRER 180

Query: 181 REREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPL 240
           REREREEERSRRSRSRSVREREREVDVRESRRMKEKKDT EPEADPERDQRTVFAYQMPL
Sbjct: 181 REREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTAEPEADPERDQRTVFAYQMPL 240

Query: 241 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP 300
           KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP
Sbjct: 241 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP 300

Query: 301 VMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV 360
           VMVKPSEAEKNLVQSNT+GASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV
Sbjct: 301 VMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV 360

Query: 361 QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS 420
           QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS
Sbjct: 361 QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS 420

Query: 421 NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQ 480
           NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLP+NGQ
Sbjct: 421 NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPLNGQ 480

Query: 481 AAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGR 540
           AAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYG 
Sbjct: 481 AAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGH 540

Query: 541 VKHIYVDKYFRNRDGKKLLMPSWMGESYFPYLILGWLWKGLSYADISLCHALSQIYNYT 599
           VKHIYVDKYFRNRDGKKLLMPSWMGESYFPYLILGWLWKGLSYA+ISL HALSQIY YT
Sbjct: 541 VKHIYVDKYFRNRDGKKLLMPSWMGESYFPYLILGWLWKGLSYAEISLAHALSQIYKYT 599

[Close]
BLAST of CsGy6G026290 vs. NCBI nr
Match: XP_008440990.1 (PREDICTED: RNA-binding protein 39 isoform X1 [Cucumis melo])

HSP 1 Score: 1047 bits (2707), Expect = 0.0
Identity = 588/601 (97.84%), Postives = 595/601 (99.00%), Query Frame = 0 

Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVEEQDDRETKKPKRS+SERNEKSTRKREVDEEAGSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSESERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDREE 120
           RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKER+RDRDREE
Sbjct: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120

Query: 121 RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERERRDRER 180
           RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKE+ERE+EKEKERERRDRER
Sbjct: 121 RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEKEREREKEKERERRDRER 180

Query: 181 REREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPL 240
           REREREEERSRRSRSRSVREREREVDVRESRRMKEKKDT EPEADPERDQRTVFAYQMPL
Sbjct: 181 REREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTAEPEADPERDQRTVFAYQMPL 240

Query: 241 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP 300
           KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP
Sbjct: 241 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP 300

Query: 301 VMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV 360
           VMVKPSEAEKNLVQSNT+GASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV
Sbjct: 301 VMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV 360

Query: 361 QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS 420
           QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS
Sbjct: 361 QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS 420

Query: 421 NDLDDDEGGGL--ALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVN 480
           NDLDDDEGGGL  ALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLP+N
Sbjct: 421 NDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPLN 480

Query: 481 GQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKY 540
           GQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKY
Sbjct: 481 GQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKY 540

Query: 541 GRVKHIYVDKYFRNRDGKKLLMPSWMGESYFPYLILGWLWKGLSYADISLCHALSQIYNY 599
           G VKHIYVDKYFRNRDGKKLLMPSWMGESYFPYLILGWLWKGLSYA+ISL HALSQIY Y
Sbjct: 541 GHVKHIYVDKYFRNRDGKKLLMPSWMGESYFPYLILGWLWKGLSYAEISLAHALSQIYKY 600

[Close]
BLAST of CsGy6G026290 vs. NCBI nr
Match: XP_038881755.1 (RNA-binding protein 39 isoform X1 [Benincasa hispida])

HSP 1 Score: 1016 bits (2626), Expect = 0.0
Identity = 571/599 (95.33%), Postives = 586/599 (97.83%), Query Frame = 0 

Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVEEQDDRETKKPK+S+SERNEKS+RKREVDEEAGSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKKSESERNEKSSRKREVDEEAGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDREE 120
           RSEHENGKED+DHSGR RDRHRRDREEE DGGKERD+ERNRTRERGSSEKER+RDRDREE
Sbjct: 61  RSEHENGKEDKDHSGRGRDRHRRDREEEADGGKERDRERNRTRERGSSEKERDRDRDREE 120

Query: 121 RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERERRDRER 180
           RDRDRHKEKERERDKDR+DK+RDRERHKEKDRERDKDRRD++REREKEKE  RERR+RE+
Sbjct: 121 RDRDRHKEKERERDKDRRDKDRDRERHKEKDRERDKDRRDRDREREKEKE--RERREREK 180

Query: 181 REREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPL 240
           REREREEERSRRSRSRSVREREREVDVRE+RRMKEKKD  EPEADPERDQRTVFAYQMPL
Sbjct: 181 REREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQMPL 240

Query: 241 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP 300
           KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP
Sbjct: 241 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP 300

Query: 301 VMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV 360
           VMVKPSEAEKNLVQSNT+GASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV
Sbjct: 301 VMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV 360

Query: 361 QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS 420
           QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS
Sbjct: 361 QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS 420

Query: 421 NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQ 480
           NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLP+NGQ
Sbjct: 421 NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPLNGQ 480

Query: 481 AAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGR 540
            AVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGR
Sbjct: 481 VAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGR 540

Query: 541 VKHIYVDKYFRNRDGKKLLMPSWMGESYFPYLILGWLWKGLSYADISLCHALSQIYNYT 599
           VKHIYVDKYFRNRDGKKLLMP WMGESYFPYLILGWLWKGLSYADIS    L QIYNYT
Sbjct: 541 VKHIYVDKYFRNRDGKKLLMPPWMGESYFPYLILGWLWKGLSYADIS--PELLQIYNYT 595

[Close]
BLAST of CsGy6G026290 vs. NCBI nr
Match: XP_022949798.1 (RNA-binding protein 39-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 967 bits (2500), Expect = 0.0
Identity = 550/592 (92.91%), Postives = 571/592 (96.45%), Query Frame = 0 

Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVE+QDD+ETKK K+S+SERNEKS+RKREVDEEAGSGGR DEE+KVKRS
Sbjct: 1   MDFDEYDYLEKAVEDQDDKETKKAKKSESERNEKSSRKREVDEEAGSGGRVDEELKVKRS 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDREE 120
           +SEHENGKEDRDHSGRARDRHRRDREEETDG KERD+ERNRTR+RGSSEKER+RDRDREE
Sbjct: 61  KSEHENGKEDRDHSGRARDRHRRDREEETDGVKERDRERNRTRDRGSSEKERDRDRDREE 120

Query: 121 RDRDRHKEKE----RERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERERR 180
           RDR+RHKEKE    RERDKDR+DKERDRERHKEKDRERDKDRRDKEREREKEKE  RERR
Sbjct: 121 RDRERHKEKEKEKERERDKDRRDKERDRERHKEKDRERDKDRRDKEREREKEKE--RERR 180

Query: 181 DRERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAY 240
           +RE+REREREEERSRRSRSRSVRE+EREVDVRE+RRMKEKKD  EPEADPERDQRTVFAY
Sbjct: 181 EREKREREREEERSRRSRSRSVREKEREVDVRENRRMKEKKDMVEPEADPERDQRTVFAY 240

Query: 241 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL 300
           QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL
Sbjct: 241 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL 300

Query: 301 LGQPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGP 360
            GQPVMVKPSEAEKNLVQSNT+GASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGP
Sbjct: 301 FGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGP 360

Query: 361 VELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQES 420
           VELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQE+
Sbjct: 361 VELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQEN 420

Query: 421 VAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLP 480
           VAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLN SAPNQR+TSLP
Sbjct: 421 VAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNASAPNQRATSLP 480

Query: 481 VNGQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS 540
           +NGQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFD+EIKEDVEEECS
Sbjct: 481 LNGQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDLEIKEDVEEECS 540

Query: 541 KYGRVKHIYVDKYFRNRDGKKLLMPSWMGESYFPYLILGWLWKGLSYADISL 588
           KYG VKHIYVDKYFR RDGKKLLMP WMGESYFPYLILG LWK LSYA   L
Sbjct: 541 KYGHVKHIYVDKYFRIRDGKKLLMPPWMGESYFPYLILGRLWKWLSYASPEL 590

[Close]
BLAST of CsGy6G026290 vs. ExPASy TrEMBL
Match: A0A1S3B2F7 (RNA-binding protein 39 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103485239 PE=4 SV=1)

HSP 1 Score: 1052 bits (2720), Expect = 0.0
Identity = 588/599 (98.16%), Postives = 595/599 (99.33%), Query Frame = 0 

Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVEEQDDRETKKPKRS+SERNEKSTRKREVDEEAGSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSESERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDREE 120
           RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKER+RDRDREE
Sbjct: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120

Query: 121 RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERERRDRER 180
           RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKE+ERE+EKEKERERRDRER
Sbjct: 121 RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEKEREREKEKERERRDRER 180

Query: 181 REREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPL 240
           REREREEERSRRSRSRSVREREREVDVRESRRMKEKKDT EPEADPERDQRTVFAYQMPL
Sbjct: 181 REREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTAEPEADPERDQRTVFAYQMPL 240

Query: 241 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP 300
           KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP
Sbjct: 241 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP 300

Query: 301 VMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV 360
           VMVKPSEAEKNLVQSNT+GASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV
Sbjct: 301 VMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV 360

Query: 361 QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS 420
           QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS
Sbjct: 361 QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS 420

Query: 421 NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQ 480
           NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLP+NGQ
Sbjct: 421 NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPLNGQ 480

Query: 481 AAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGR 540
           AAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYG 
Sbjct: 481 AAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGH 540

Query: 541 VKHIYVDKYFRNRDGKKLLMPSWMGESYFPYLILGWLWKGLSYADISLCHALSQIYNYT 599
           VKHIYVDKYFRNRDGKKLLMPSWMGESYFPYLILGWLWKGLSYA+ISL HALSQIY YT
Sbjct: 541 VKHIYVDKYFRNRDGKKLLMPSWMGESYFPYLILGWLWKGLSYAEISLAHALSQIYKYT 599

[Close]
BLAST of CsGy6G026290 vs. ExPASy TrEMBL
Match: A0A1S3B359 (RNA-binding protein 39 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485239 PE=4 SV=1)

HSP 1 Score: 1047 bits (2707), Expect = 0.0
Identity = 588/601 (97.84%), Postives = 595/601 (99.00%), Query Frame = 0 

Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVEEQDDRETKKPKRS+SERNEKSTRKREVDEEAGSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSESERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDREE 120
           RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKER+RDRDREE
Sbjct: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDREE 120

Query: 121 RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERERRDRER 180
           RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKE+ERE+EKEKERERRDRER
Sbjct: 121 RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEKEREREKEKERERRDRER 180

Query: 181 REREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPL 240
           REREREEERSRRSRSRSVREREREVDVRESRRMKEKKDT EPEADPERDQRTVFAYQMPL
Sbjct: 181 REREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTAEPEADPERDQRTVFAYQMPL 240

Query: 241 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP 300
           KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP
Sbjct: 241 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP 300

Query: 301 VMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV 360
           VMVKPSEAEKNLVQSNT+GASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV
Sbjct: 301 VMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV 360

Query: 361 QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS 420
           QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS
Sbjct: 361 QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS 420

Query: 421 NDLDDDEGGGL--ALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVN 480
           NDLDDDEGGGL  ALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLP+N
Sbjct: 421 NDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPLN 480

Query: 481 GQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKY 540
           GQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKY
Sbjct: 481 GQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKY 540

Query: 541 GRVKHIYVDKYFRNRDGKKLLMPSWMGESYFPYLILGWLWKGLSYADISLCHALSQIYNY 599
           G VKHIYVDKYFRNRDGKKLLMPSWMGESYFPYLILGWLWKGLSYA+ISL HALSQIY Y
Sbjct: 541 GHVKHIYVDKYFRNRDGKKLLMPSWMGESYFPYLILGWLWKGLSYAEISLAHALSQIYKY 600

[Close]
BLAST of CsGy6G026290 vs. ExPASy TrEMBL
Match: A0A6J1GD41 (RNA-binding protein 39-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453086 PE=4 SV=1)

HSP 1 Score: 967 bits (2500), Expect = 0.0
Identity = 550/592 (92.91%), Postives = 571/592 (96.45%), Query Frame = 0 

Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVE+QDD+ETKK K+S+SERNEKS+RKREVDEEAGSGGR DEE+KVKRS
Sbjct: 1   MDFDEYDYLEKAVEDQDDKETKKAKKSESERNEKSSRKREVDEEAGSGGRVDEELKVKRS 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDREE 120
           +SEHENGKEDRDHSGRARDRHRRDREEETDG KERD+ERNRTR+RGSSEKER+RDRDREE
Sbjct: 61  KSEHENGKEDRDHSGRARDRHRRDREEETDGVKERDRERNRTRDRGSSEKERDRDRDREE 120

Query: 121 RDRDRHKEKE----RERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERERR 180
           RDR+RHKEKE    RERDKDR+DKERDRERHKEKDRERDKDRRDKEREREKEKE  RERR
Sbjct: 121 RDRERHKEKEKEKERERDKDRRDKERDRERHKEKDRERDKDRRDKEREREKEKE--RERR 180

Query: 181 DRERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAY 240
           +RE+REREREEERSRRSRSRSVRE+EREVDVRE+RRMKEKKD  EPEADPERDQRTVFAY
Sbjct: 181 EREKREREREEERSRRSRSRSVREKEREVDVRENRRMKEKKDMVEPEADPERDQRTVFAY 240

Query: 241 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL 300
           QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL
Sbjct: 241 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL 300

Query: 301 LGQPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGP 360
            GQPVMVKPSEAEKNLVQSNT+GASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGP
Sbjct: 301 FGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGP 360

Query: 361 VELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQES 420
           VELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQE+
Sbjct: 361 VELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQEN 420

Query: 421 VAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLP 480
           VAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLN SAPNQR+TSLP
Sbjct: 421 VAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNASAPNQRATSLP 480

Query: 481 VNGQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS 540
           +NGQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFD+EIKEDVEEECS
Sbjct: 481 LNGQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDLEIKEDVEEECS 540

Query: 541 KYGRVKHIYVDKYFRNRDGKKLLMPSWMGESYFPYLILGWLWKGLSYADISL 588
           KYG VKHIYVDKYFR RDGKKLLMP WMGESYFPYLILG LWK LSYA   L
Sbjct: 541 KYGHVKHIYVDKYFRIRDGKKLLMPPWMGESYFPYLILGRLWKWLSYASPEL 590

[Close]
BLAST of CsGy6G026290 vs. ExPASy TrEMBL
Match: A0A0A0KFB3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486730 PE=4 SV=1)

HSP 1 Score: 958 bits (2477), Expect = 0.0
Identity = 548/548 (100.00%), Postives = 548/548 (100.00%), Query Frame = 0 

Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDREE 120
           RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDREE
Sbjct: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDREE 120

Query: 121 RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERERRDRER 180
           RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERERRDRER
Sbjct: 121 RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERERRDRER 180

Query: 181 REREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPL 240
           REREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPL
Sbjct: 181 REREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPL 240

Query: 241 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP 300
           KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP
Sbjct: 241 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP 300

Query: 301 VMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV 360
           VMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV
Sbjct: 301 VMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV 360

Query: 361 QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS 420
           QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS
Sbjct: 361 QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS 420

Query: 421 NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQ 480
           NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQ
Sbjct: 421 NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQ 480

Query: 481 AAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGR 540
           AAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGR
Sbjct: 481 AAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGR 540

Query: 541 VKHIYVDK 548
           VKHIYVDK
Sbjct: 541 VKHIYVDK 548

[Close]
BLAST of CsGy6G026290 vs. ExPASy TrEMBL
Match: A0A6J1INV7 (RNA-binding protein 39-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478129 PE=4 SV=1)

HSP 1 Score: 956 bits (2472), Expect = 0.0
Identity = 544/585 (92.99%), Postives = 564/585 (96.41%), Query Frame = 0 

Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           MDFDEYDYLEKAVE+QDD+ETKK K+S+SERNEKS+RKREVDEEAGSGGR DEE+KVKRS
Sbjct: 1   MDFDEYDYLEKAVEDQDDKETKKAKKSESERNEKSSRKREVDEEAGSGGRVDEELKVKRS 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDREE 120
           +SEHENGKEDRDHSGRARDRHRRDREEETDG KERD+ERNRTR+RGSSEKER+RDRDRE 
Sbjct: 61  KSEHENGKEDRDHSGRARDRHRRDREEETDGVKERDRERNRTRDRGSSEKERDRDRDRE- 120

Query: 121 RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERERRDRER 180
             R + KEKERERDKDR+DKERDRERHKEKDRERDKDRRDKEREREKEKE  RERR+RE+
Sbjct: 121 --RHKEKEKERERDKDRRDKERDRERHKEKDRERDKDRRDKEREREKEKE--RERREREK 180

Query: 181 REREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPL 240
           REREREEERSRRSRSRSVRE+EREVDVRE+RRMKEKKD  EPEADPERDQRTVFAYQMPL
Sbjct: 181 REREREEERSRRSRSRSVREKEREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQMPL 240

Query: 241 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQP 300
           KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLL GQP
Sbjct: 241 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLFGQP 300

Query: 301 VMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV 360
           VMVKPSEAEKNLVQSNT+GASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV
Sbjct: 301 VMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV 360

Query: 361 QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKS 420
           QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQE+VAKS
Sbjct: 361 QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQENVAKS 420

Query: 421 NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQ 480
           NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLN SAPNQR+TSLP NGQ
Sbjct: 421 NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNASAPNQRATSLPQNGQ 480

Query: 481 AAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGR 540
           AAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPS ETAPDFD+EIKEDVEEECSKYG 
Sbjct: 481 AAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSMETAPDFDLEIKEDVEEECSKYGH 540

Query: 541 VKHIYVDKYFRNRDGKKLLMPSWMGESYFPYLILGWLWKGLSYAD 585
           VKHIYVDKYFR RDGKKLLMP WMGESYFPYLILG LWK LSYAD
Sbjct: 541 VKHIYVDKYFRIRDGKKLLMPPWMGESYFPYLILGRLWKWLSYAD 580

[Close]
BLAST of CsGy6G026290 vs. TAIR 10
Match: AT5G09880.1 (Splicing factor, CC1-like )

HSP 1 Score: 501.9 bits (1291), Expect = 7.1e-142
Identity = 342/553 (61.84%), Postives = 387/553 (69.98%), Query Frame = 0 

Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           M+FDEY+YLEK VEE      KK + S +ER+E+S RKRE  E  G  G E+E V    S
Sbjct: 1   MEFDEYEYLEKTVEE-GAGSNKKKEESGNERSERSYRKREGGERQGEEGGEEERVS---S 60

Query: 61  RSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDREE 120
           RS+                                 K R    E G  +++RER+R R  
Sbjct: 61  RSK---------------------------------KSRGDGEENGGGKRDRERERHRSS 120

Query: 121 RDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERERRDRER 180
           RD+DR ++K RE     +DKE DRER     +ERD+  RDK              RDRER
Sbjct: 121 RDKDRERDKVRE---GSRDKESDRER---SSKERDRSDRDKP-------------RDRER 180

Query: 181 REREREEERSRRSRSRSVR-EREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMP 240
           RERE      +RS SRS R E+E EV  R SRR ++KKD  EPEADPERDQRTVFAYQMP
Sbjct: 181 RERE------KRSSSRSRREEKEPEVVERGSRRHRDKKD--EPEADPERDQRTVFAYQMP 240

Query: 241 LKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQ 300
           LKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGY+EFYD MSVPMAIALSGQL LGQ
Sbjct: 241 LKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLFLGQ 300

Query: 301 PVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVEL 360
           PVMVKPSEAEKNL QSN+T   G GP    DRKLYVGNLHFNM+E  LR+IFEAFGPVEL
Sbjct: 301 PVMVKPSEAEKNLAQSNSTTVGGTGP---ADRKLYVGNLHFNMSELQLRQIFEAFGPVEL 360

Query: 361 VQLPLDLESGHCKGFGFVQFAHLEHAKAAQ-SLNGKLEIAGRTIKVSSVTDHIGAQESVA 420
           VQLPLD E+G CKGFGF+QF  LEH+KAAQ +LNGKLEIAGRTIKVSSV+DHIG Q+S  
Sbjct: 361 VQLPLDPETGQCKGFGFIQFVQLEHSKAAQIALNGKLEIAGRTIKVSSVSDHIGTQDSAP 420

Query: 421 KSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQ--RSTSLP 480
           KS D DDD+GGGLALNAQSRA+LMQKLDR+GIATSI GSLG P LNG+A NQ   + S P
Sbjct: 421 KSADFDDDDGGGLALNAQSRAMLMQKLDRSGIATSIVGSLGVPGLNGAAFNQPGMNPSFP 478

Query: 481 VNGQAAVAAPVLPANFTPP-VLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEEC 540
            +        VLP    P  V + VG PSECLLLKNMFDP+TET P+FD+EI++DV +EC
Sbjct: 481 TS--------VLPTTAIPSFVNEHVGLPSECLLLKNMFDPATETEPNFDLEIRDDVADEC 478

Query: 541 SKYGRVKHIYVDK 549
           SKYG V HIYVDK
Sbjct: 541 SKYGPVNHIYVDK 478

[Close]
BLAST of CsGy6G026290 vs. TAIR 10
Match: AT2G16940.1 (Splicing factor, CC1-like )

HSP 1 Score: 408.3 bits (1048), Expect = 1.1e-113
Identity = 312/568 (54.93%), Postives = 375/568 (66.02%), Query Frame = 0 

Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVKVKRS 60
           MDFDEY+YLEK VE                          ++ E G+GG  DE+VK    
Sbjct: 1   MDFDEYEYLEKTVENP-----------------------HLENEVGNGG-GDEKVK---- 60

Query: 61  RSEHENGKEDRDHSGRAR-DRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDRE 120
                 GKE      R+R  RHR D++      KERD++ +  R + S    R R RDRE
Sbjct: 61  ----SEGKE------RSRSSRHRGDKK------KERDEDEDGRRSKRSRSHHRSRSRDRE 120

Query: 121 ERDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKERE-REKEKEKERERRDR 180
              RDRH+     RD+DR +K+ D+E    KDRERD   RDK+R+ + ++ EK+R RR R
Sbjct: 121 ---RDRHRSSREHRDRDR-EKDVDKEERNGKDRERD---RDKDRDSKGRDHEKDRSRRSR 180

Query: 181 ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKK-DTTEPEADPERDQRTVFAYQ 240
            R ER R +ER  +S     +ERE +   R+ RR K+KK D  EPEADPERDQRTVFAYQ
Sbjct: 181 SRSERHRSQER-EKSLEIEPKERETKDRDRDRRRHKDKKEDKVEPEADPERDQRTVFAYQ 240

Query: 241 MPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLL 300
           + L+ATERDVYEFFS+AGKVRDVR+IMDR SRRS+G+GYVEFYD MSVPMAIALSGQ LL
Sbjct: 241 IALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMAIALSGQPLL 300

Query: 301 GQPVMVKPSEAEKNLVQSNTTGASGA----GPYGAVDRKLYVGNLHFNMTETHLREIFEA 360
           GQPVMVKPSEAEKNLVQS TT A+GA    GPY    R+LYVGNLH NM+E  LR++FE+
Sbjct: 301 GQPVMVKPSEAEKNLVQS-TTAAAGAGGMLGPYSGGARRLYVGNLHINMSEDDLRKVFES 360

Query: 361 FGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGA 420
           FG VELVQ+P D E+G CKGFGFVQFA LE A+ A +LNG+LEIAGR IKVS+VTD    
Sbjct: 361 FGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNALNLNGQLEIAGRAIKVSAVTDQTEV 420

Query: 421 QES--VAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQR 480
            E+     + DLDDD+GGGL+LNAQSRALLMQKLDR+G A+S  G   A   NG      
Sbjct: 421 PEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDRSGTASS-TGLTTAASFNGGVSTIS 480

Query: 481 STSLPVNGQAAVAA-----------PVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETA 540
           S + P   Q +  A            V+PA F P     +G PSECLLLKNMFDPSTET 
Sbjct: 481 SLAAPALVQGSFPAVAGLAGSGIIPGVIPAGFDP-----IGVPSECLLLKNMFDPSTETE 508

Query: 541 PDFDMEIKEDVEEECSKYGRVKHIYVDK 549
            DFD +IKEDV+EECSK+G++ HI+VDK
Sbjct: 541 DDFDEDIKEDVKEECSKFGKLNHIFVDK 508

[Close]
BLAST of CsGy6G026290 vs. TAIR 10
Match: AT2G16940.3 (Splicing factor, CC1-like )

HSP 1 Score: 380.6 bits (976), Expect = 2.4e-105
Identity = 299/586 (51.02%), Postives = 378/586 (64.51%), Query Frame = 0 

Query: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVK---V 60
           MDFDEY+YLEK VE                          ++ E G+GG  DE+VK    
Sbjct: 1   MDFDEYEYLEKTVENP-----------------------HLENEVGNGG-GDEKVKSEGK 60

Query: 61  KRSRSEHENG--KEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERD 120
           +RSRS    G  K++RD     R R +R R       ++R+++R+R+  R   +++RE+D
Sbjct: 61  ERSRSSRHRGDKKKERDEDEDGR-RSKRSRSHHRSRSRDRERDRHRS-SREHRDRDREKD 120

Query: 121 RDREERDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERER 180
            D+EER+    K++ER+RDKDR  K RD E+ + +   R + R ++ R +E+EK  E E 
Sbjct: 121 VDKEERN---GKDRERDRDKDRDSKGRDHEKDRSR---RSRSRSERHRSQEREKSLEIEP 180

Query: 181 RDRERREREREEERSRRSRSRSVR---EREREVDVRE----SRRMKEKKDTTEPEADPER 240
           ++RE ++R+R+           V    + +  +  R+     R   +K+D  EPEADPER
Sbjct: 181 KERETKDRDRDRRFILMLLGPLVLPSVQLDGALPCRDFSCFIRHKDKKEDKVEPEADPER 240

Query: 241 DQRTVFAYQMPLKATERDVYEFFSKAGK---------VRDVRLIMDRNSRRSKGVGYVEF 300
           DQRTVFAYQ+ L+ATERDVYEFFS+AGK         VRDVR+IMDR SRRS+G+GYVEF
Sbjct: 241 DQRTVFAYQIALRATERDVYEFFSRAGKVCPFLCRFHVRDVRIIMDRISRRSRGIGYVEF 300

Query: 301 YDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTGASGA----GPYGAVDRKLYV 360
           YD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQS TT A+GA    GPY    R+LYV
Sbjct: 301 YDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQS-TTAAAGAGGMLGPYSGGARRLYV 360

Query: 361 GNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKL 420
           GNLH NM+E  LR++FE+FG VELVQ+P D E+G CKGFGFVQFA LE A+ A +LNG+L
Sbjct: 361 GNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNALNLNGQL 420

Query: 421 EIAGRTIKVSSVTDHIGAQES--VAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATS 480
           EIAGR IKVS+VTD     E+     + DLDDD+GGGL+LNAQSRALLMQKLDR+G A+S
Sbjct: 421 EIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDRSGTASS 480

Query: 481 IAGSLGAPVLNGSAPNQRSTSLPVNGQAAVAA-----------PVLPANFTPPVLQSVGS 540
             G   A   NG      S + P   Q +  A            V+PA F P     +G 
Sbjct: 481 -TGLTTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPGVIPAGFDP-----IGV 540

Query: 541 PSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGRVKHIYVDK 549
           PSECLLLKNMFDPSTET  DFD +IKEDV+EECSK+G++ HI+VDK
Sbjct: 541 PSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDK 546

[Close]
BLAST of CsGy6G026290 vs. TAIR 10
Match: AT2G16940.2 (Splicing factor, CC1-like )

HSP 1 Score: 379.8 bits (974), Expect = 4.1e-105
Identity = 300/601 (49.92%), Postives = 373/601 (62.06%), Query Frame = 0 

Query: 1   MDFDEYDYLEKAVE----EQDDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEVK 60
           MDFDEY+YLEK VE    E +       ++  SE  E+S   R   ++      +++  +
Sbjct: 1   MDFDEYEYLEKTVENPHLENEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDGRR 60

Query: 61  VKRSRSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDR 120
            KRSRS H +   DR+     RDRHR  RE                      +++RE+D 
Sbjct: 61  SKRSRSHHRSRSRDRE-----RDRHRSSREHR--------------------DRDREKDV 120

Query: 121 DREERD-RDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKE-KERE 180
           D+EER+ +DR ++++++RD   +D E+DR R   + R R +  R +ERE+  E E KERE
Sbjct: 121 DKEERNGKDRERDRDKDRDSKGRDHEKDRSR---RSRSRSERHRSQEREKSLEIEPKERE 180

Query: 181 RRDRERREREREE------------------------------ERSRRSRSRSVRERERE 240
            +DR+R  R   E                              E + R+       R+R 
Sbjct: 181 TKDRDRDRRYTSELVIDFIIYVHWYCLLYNLMGHVPFKIIIVIEGTSRASCVYAYWRKRH 240

Query: 241 VDVRESRRMKEKKDTTEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIM 300
            D        +K+D  EPEADPERDQRTVFAYQ+ L+ATERDVYEFFS+AGKVRDVR+IM
Sbjct: 241 KD--------KKEDKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIM 300

Query: 301 DRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTGASGA- 360
           DR SRRS+G+GYVEFYD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQS TT A+GA 
Sbjct: 301 DRISRRSRGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQS-TTAAAGAG 360

Query: 361 ---GPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFA 420
              GPY    R+LYVGNLH NM+E  LR++FE+FG VELVQ+P D E+G CKGFGFVQFA
Sbjct: 361 GMLGPYSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFA 420

Query: 421 HLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQES--VAKSNDLDDDEGGGLALNAQSR 480
            LE A+ A +LNG+LEIAGR IKVS+VTD     E+     + DLDDD+GGGL+LNAQSR
Sbjct: 421 RLEDARNALNLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSR 480

Query: 481 ALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQAAVAA-----------PV 540
           ALLMQKLDR+G A+S  G   A   NG      S + P   Q +  A            V
Sbjct: 481 ALLMQKLDRSGTASS-TGLTTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPGV 540

Query: 541 LPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGRVKHIYVD 549
           +PA F P     +G PSECLLLKNMFDPSTET  DFD +IKEDV+EECSK+G++ HI+VD
Sbjct: 541 IPAGFDP-----IGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVD 557

The following BLAST results are available for this feature:
BLAST of CsGy6G026290 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5RC802.4e-4640.75RNA-binding protein 39 OS=Pongo abelii OX=9601 GN=RBM39 PE=2 SV=1[more]
Q8VH513.2e-4640.70RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=2[more]
Q144984.2e-4640.70RNA-binding protein 39 OS=Homo sapiens OX=9606 GN=RBM39 PE=1 SV=2[more]
Q86U061.7e-2634.30Probable RNA-binding protein 23 OS=Homo sapiens OX=9606 GN=RBM23 PE=1 SV=1[more]
O138453.2e-2232.08RNA-binding protein rsd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ... [more]
BLAST of CsGy6G026290 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011657783.10.0100.00RNA-binding protein 39 isoform X2 [Cucumis sativus][more]
XP_008440992.10.098.16PREDICTED: RNA-binding protein 39 isoform X3 [Cucumis melo][more]
XP_008440990.10.097.84PREDICTED: RNA-binding protein 39 isoform X1 [Cucumis melo][more]
XP_038881755.10.095.33RNA-binding protein 39 isoform X1 [Benincasa hispida][more]
XP_022949798.10.092.91RNA-binding protein 39-like isoform X2 [Cucurbita moschata][more]
BLAST of CsGy6G026290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3B2F70.098.16RNA-binding protein 39 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103485239 PE=4 S... [more]
A0A1S3B3590.097.84RNA-binding protein 39 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485239 PE=4 S... [more]
A0A6J1GD410.092.91RNA-binding protein 39-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11145... [more]
A0A0A0KFB30.0100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486730 PE=4 SV=1[more]
A0A6J1INV70.092.99RNA-binding protein 39-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114781... [more]
BLAST of CsGy6G026290 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G09880.17.1e-14261.84Splicing factor, CC1-like [more]
AT2G16940.11.1e-11354.93Splicing factor, CC1-like [more]
AT2G16940.32.4e-10551.02Splicing factor, CC1-like [more]
AT2G16940.24.1e-10549.92Splicing factor, CC1-like [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 152..196
NoneNo IPR availableCOILSCoilCoilcoord: 109..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..230
NoneNo IPR availablePANTHERPTHR48036SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATEDcoord: 84..548
NoneNo IPR availablePANTHERPTHR48036SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATEDcoord: 1..105
NoneNo IPR availablePANTHERPTHR48036:SF5CC1-LIKE SPLICING FACTORcoord: 84..548
NoneNo IPR availablePANTHERPTHR48036:SF5CC1-LIKE SPLICING FACTORcoord: 1..105
NoneNo IPR availableCDDcd12285RRM3_RBM39_likecoord: 504..548
e-value: 4.48428E-21
score: 85.674
NoneNo IPR availableCDDcd12283RRM1_RBM39_likecoord: 232..304
e-value: 1.33447E-45
score: 153.531
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 232..304
e-value: 2.6E-17
score: 73.5
coord: 332..405
e-value: 1.8E-24
score: 97.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 238..300
e-value: 3.4E-11
score: 42.8
coord: 333..403
e-value: 1.9E-18
score: 66.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 231..308
score: 15.562085
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 331..409
score: 17.915731
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 501..559
e-value: 2.8E-14
score: 54.9
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 164..318
e-value: 2.6E-28
score: 100.9
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 326..422
e-value: 9.8E-25
score: 88.8
IPR029123Splicing factor RBM39, linkerPFAMPF15519RBM39linkercoord: 423..522
e-value: 1.5E-23
score: 83.6
IPR006509Splicing factor, RBM39-likeTIGRFAMTIGR01622TIGR01622coord: 109..555
e-value: 6.0E-151
score: 501.8
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 330..407
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 224..315
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 502..549

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G026290.2CsGy6G026290.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006397 mRNA processing
cellular_component GO:0005634 nucleus
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding