CsGy6G023380 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTCTCCTTCTCCTTCTCCCTTGCTTGCTTAGGAGGGTGAAGGTGAGAAAAAATATCAAAAGGTGAGTTTGGGTTGTTAACCTCTCAATTTAGTTCACCTTTGTTATTGTCTCATTAATTATATATATACTTATTGTTACTATATCAATCATCATGATATGTTGTGAGTTCTTTTACTATACCATCACGCGTGTTTAAGAAATGTTGGGTTTAGAATTTGGTGAAAGATGGTCGAGTGAGATTTGTTGTATGGATTGAAACTTAAGGCCGAGTGGTTAGACACTAAGTTGATTGTGAAGTTTGGAGTCAATATGTTGAAGTTAAGAAGTTCTATATTTGAGGTGTAGAGTTTGAAAAATAAAATTATTTGATAAATGTACAAACGCTTCCTAAATGATCACAAGAGAGACGTTTGTGTGTTTAAGAAATTAAAGTATTGGGTTTAAAGTGCAAGTTTAAGAAAATAGTTTATTATATGTTTAGAAATTGGTGCCGGATTGAGTGAGGTTTGTTTACGATTGAAACTTATGAGGTGTTTAGGCTCTAGGTTGAAAATTAAGAAGTTTATGTTTGAGATGTAGAGTTGTTAAGGTAAAATTACTCGATAAACGTAAATACAGTGGATAAAGAGAAGATAAAGTTTTTTGATAAATGTGTAAACTTAACACACAATTACCATTAAAATTCAATTGTTTAACACCGATATACATATAAAAAACAATCAAATAAATTAACAAACACTTAATTTTATTAACTCGATCATAATCGACACAATTTTTTAGTTTTCTTTTGTATGATTATTGTAGTAATGAAATCTGACACGTGCGAGGCATGTCATGTGACCCGATCGATAATGGGTCCACTCATAAATCATATTGGGCCGTTTATATTTCAGCCCATAGAAAACATTATGGGCCGAGCCCAATAATACTATTACTCTATTTTTTTCATTGATGTGATTTATAGTATAGTTTTTCATTTGCATATATCTTCACAGGTTTAATTTCATTTCAATATTTTCTATCCTAATTATACATTTTAATACCAATACTGCCTAATTTATTTCAACAATCATGATACCTAAGTAAATAAAGTTAAACATAACAATTTCACTCGTTTTCCACTCAGGGATGGATCCAAGCAATTCAAAAATCGATCCATCAGGTTCGTTTCAATTTTTTTCAAACTTTTAGATTTATCGTTAGTTTAATATAACCGTTTAGTGAACGATTGAAATATTTGTATAATAGAGTTTGAGGCGGTGCCTTCGGAGTTGAAAACCTTAGAAAGGGAGCTCGAGGAAAAGATGAAGAAGATGGAAGAAATGAAGAAGAAGATTGAGGGTAAGAAGGTTTGTTTAGAAAAGAAGAAGGATGGTGTGAAGTTTTCAAGGAAAGAAATGGAAGTTTTTAAAGGGTTATGTGGAAAATACAAGAGCTTGAGAAAGGAATACAATGAAGCATGGGAGAAAGAGAGAAGAGAATCCTAGGAAATGTGTAATTAATGACCAAAGACTTGAATGTCT CCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTCTCCTTCTCCTTCTCCCTTGCTTGCTTAGGAGGGTGAAGGTGAGAAAAAATATCAAAAGGGATGGATCCAAGCAATTCAAAAATCGATCCATCAGAGTTTGAGGCGGTGCCTTCGGAGTTGAAAACCTTAGAAAGGGAGCTCGAGGAAAAGATGAAGAAGATGGAAGAAATGAAGAAGAAGATTGAGGGTAAGAAGGTTTGTTTAGAAAAGAAGAAGGATGGTGTGAAGTTTTCAAGGAAAGAAATGGAAGTTTTTAAAGGGTTATGTGGAAAATACAAGAGCTTGAGAAAGGAATACAATGAAGCATGGGAGAAAGAGAGAAGAGAATCCTAGGAAATGTGTAATTAATGACCAAAGACTTGAATGTCT ATGGATCCAAGCAATTCAAAAATCGATCCATCAGAGTTTGAGGCGGTGCCTTCGGAGTTGAAAACCTTAGAAAGGGAGCTCGAGGAAAAGATGAAGAAGATGGAAGAAATGAAGAAGAAGATTGAGGGTAAGAAGGTTTGTTTAGAAAAGAAGAAGGATGGTGTGAAGTTTTCAAGGAAAGAAATGGAAGTTTTTAAAGGGTTATGTGGAAAATACAAGAGCTTGAGAAAGGAATACAATGAAGCATGGGAGAAAGAGAGAAGAGAATCCTAG MDPSNSKIDPSEFEAVPSELKTLERELEEKMKKMEEMKKKIEGKKVCLEKKKDGVKFSRKEMEVFKGLCGKYKSLRKEYNEAWEKERRES* Homology
BLAST of CsGy6G023380 vs. NCBI nr
Match: KGN48117.1 (hypothetical protein Csa_003321 [Cucumis sativus]) HSP 1 Score: 167 bits (423), Expect = 6.76e-52 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of CsGy6G023380 vs. NCBI nr
Match: KAG7035874.1 (hypothetical protein SDJN02_02673, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 78.6 bits (192), Expect = 9.50e-17 Identity = 51/90 (56.67%), Postives = 66/90 (73.33%), Query Frame = 0
BLAST of CsGy6G023380 vs. NCBI nr
Match: XP_022958532.1 (uncharacterized protein LOC111459736 [Cucurbita moschata]) HSP 1 Score: 63.5 bits (153), Expect = 1.29e-09 Identity = 43/79 (54.43%), Postives = 56/79 (70.89%), Query Frame = 0
BLAST of CsGy6G023380 vs. NCBI nr
Match: PON89126.1 (hypothetical protein TorRG33x02_149890 [Trema orientale]) HSP 1 Score: 50.8 bits (120), Expect = 8.62e-06 Identity = 35/87 (40.23%), Postives = 55/87 (63.22%), Query Frame = 0
BLAST of CsGy6G023380 vs. NCBI nr
Match: KAF9844917.1 (hypothetical protein H0E87_018911 [Populus deltoides]) HSP 1 Score: 50.1 bits (118), Expect = 1.65e-05 Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of CsGy6G023380 vs. ExPASy TrEMBL
Match: A0A0A0KIA6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G434370 PE=4 SV=1) HSP 1 Score: 167 bits (423), Expect = 3.27e-52 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of CsGy6G023380 vs. ExPASy TrEMBL
Match: A0A6J1H234 (uncharacterized protein LOC111459736 OS=Cucurbita moschata OX=3662 GN=LOC111459736 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 6.24e-10 Identity = 43/79 (54.43%), Postives = 56/79 (70.89%), Query Frame = 0
BLAST of CsGy6G023380 vs. ExPASy TrEMBL
Match: A0A2P5EUD0 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_149890 PE=4 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 4.17e-06 Identity = 35/87 (40.23%), Postives = 55/87 (63.22%), Query Frame = 0
BLAST of CsGy6G023380 vs. ExPASy TrEMBL
Match: A0A2K1Z2Z1 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G050500 PE=4 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 1.59e-05 Identity = 35/72 (48.61%), Postives = 48/72 (66.67%), Query Frame = 0
BLAST of CsGy6G023380 vs. ExPASy TrEMBL
Match: A0A1R3IGR8 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_12215 PE=4 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 9.32e-05 Identity = 32/64 (50.00%), Postives = 44/64 (68.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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