CsGy6G018045 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G018045
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr6: 18858502 .. 18860976 (+)
RNA-Seq Expression	CsGy6G018045
Synteny	CsGy6G018045

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAACTATGAATGGCATAGTGATATTTAGCACCTCTTCAGGACAGAGCAAGAAGAAATTGATTGAAGCTGGCATACTCGTTGTGAGAGTCAAGCTCTCCTGTAGCTTGTTTAGAAGGTTCAATTCTCATCCTAGTAACTTTGATCTTTGGGTTATTAGCTCTTCTACTCAGTTGATTTCTCTTCATTTTAAAAGCTTACGGAACACTTGGTTTTCCACATAAATATTCTACACATATAAGGTTCACAATGAGGTTCAGACTTCAGCCTAACCTATTTGTGTGGGATTCAATCAATACTAACTTTATGTTCTTTCTTATCCTTCTTCAGAGAGTTGAAGTGATAATATCAAAGTAATTAGGTGGAAAAAATTTATCCGACATTCTTTTTCTGAGAGAATAATATAATATATTGACAAGGCCAAGGGAAACAATACCAGAAAATATGATGAGATCTCCTATTGAAAGGATAATAATGGTAGGTCCTTGACATTTCTATGGATATTGACAGAAAATAGCTCAGAATTAATTTGTACTACAATATAAACAGTGAAATTGCATTTACAGGTTACATGGAAATTTACAGTACTAAACCCCAAGCAACTTGAGAGGCTCCCAAAATTACTCTTCCAAATTCTTCCTATCCCTCTTCTCCATAATACTTTCTTACCTTTGTATTTATCTCTTTATTTATTATTGATTTTTGGATGAATTACCGAGCCAGATTTGTTGCTGAACCGTGGCGACCCTAGGGCAAGTTCTTTCAATCAAATAAGACTTCCATATATCGATCTTATCAAAAGATTTGTTGCTGAACCCCACAGAAAAATTTAAATTTAATAAGGGACCAAATATCACTTGGAGAACGCTCAAGCCTTTTAAAAATAAATATATTGTGCCTAATAATTACTGTAGTCCCACGAAACGTCCCCCTACATTATCTCACTGCTAATATCCTAATAATAAACCAAAGTTTTTCACACTAGTACACTATCAAGAAATTTTACTGTCTAAAGTACAAAAGCCTGAAAAATAGCCCTTAAACATAAGTTTATTGGTTGAAAGTTTATTATATTTGATATGAGTGATAAAATATATGTCAAAGCTGTCATTAGCAATTTGCAAACTGAACACAACTCCCTTAAGGAGATTTGCATTAAAACAATTGCCACCGAGGAATTTGTTAACATCAAGAATGCGGTGATGAACCTGTTTTATTGACTAACATTAGGAGTAAGTTGAACCTGTTCGAATCCAATATACCCAACATAGCTATTAGCCCCTTTCATTTTATGGACGTAAGTAGCAGGGTAAGCTTCTTTGCTGAAGTAAAAGCTGGTGCTCTCTTCAGCAATATTATTTGAATTGAAGGGTCACGGAAAAGAATGCTGGAACTATGGTGCACTCTTGGACAGTTTTGTTTGAAATTGAAGGGTGACAGTGAAAATCGTACTGGAACTTACAAAAGATCTGTTTGTGGTGGGTGGACAAAAATAAGTTGTATGTCAGGTTGTGCTACGTGGAAAATGTTCAATATATAGGGATTGGAATGCGGGTGTTACATTAGATGTGCCGAGAAGACCCTTTCAATGATGGATGGTTTGGAAACTTTCATTCAAACCAAAAGTAATTATTGTGGGTTGGCTCCTCTTGGGTTGTTGGGTTTTCTCTCTTTCAGTTGTTCTCCATGTGGACCATTTTGTCTTAGTATAGTTTTTTTTCCCTTTTAGAGACCAATAGCAATATCCTGGTTTTGCTTGTGCAGAGCTTGAACTTCTGAGTTCTTTGATCGGTTGACACAAAAATTGTGGTAAATTTAGTAATTTTGTGATCACCGAACTTCTTATTGGACAGTTGGTTGGCTCTTCTTACCAAATACATTATGTGTCAATGTCCAATTTGGTTAACACATGGCCATCAGATATATACTGTCTTCTGATTTTTTATATTAGGCGAGTACTTATACCTGCTGTCACAATGAACGCCAAACAAGTAGTTGACTCATCCTGGTTGCAGTGGTGTGGTACAGTCAAAGGTCTCACATTGTTTCAGGAGCAATGTAAGAGTAGCACTAGGCACAGCTGTGGTTGAAGGAGCGAGCAAAATTGTTGCAGTAAACGAAGGCACTGATGAAAAGAGAGATTTGAACATTCAAGCACTTGATATTAAATGTGTATGAGATTCATTGAACTACTGTAAACTATAAATTGAAAGTGTCCTGGGACTAATTAATTCTATAAATATGGCATCGGTCATTTGTCAATTCAAATATTTGACATGTTTTTTTTTTAAAATGTTTATTGTCATTTTAAGTGAGACTGGAATATAATCTTCTATTTTGATTGCAAGTTCCCTCCCCTGTAAAATAATAATGCAACTTAAAACTATTTAGAAGCTGGCTTAATATTATTTATGTGGACAGAATTGTTTCATGGTGACAGGCAAAGAGTTAACAAAGGAGAAAGGGCATGCTGA

mRNA sequence

ATGTCAACTATGAATGGCATAGTGATATTTAGCACCTCTTCAGGACAGAGCAAGAAGAAATTGATTGAAGCTGGCATACTCGTTGTGAGAGTCAAGCTCTCCTGTAGCTTGTTTAGAAGGCAAAGAGTTAACAAAGGAGAAAGGGCATGCTGA

Coding sequence (CDS)

ATGTCAACTATGAATGGCATAGTGATATTTAGCACCTCTTCAGGACAGAGCAAGAAGAAATTGATTGAAGCTGGCATACTCGTTGTGAGAGTCAAGCTCTCCTGTAGCTTGTTTAGAAGGCAAAGAGTTAACAAAGGAGAAAGGGCATGCTGA

Protein sequence

MSTMNGIVIFSTSSGQSKKKLIEAGILVVRVKLSCSLFRRQRVNKGERAC*

Homology

[Close]

BLAST of CsGy6G018045 vs. NCBI nr
Match: KGN47530.1 (hypothetical protein Csa_019046 [Cucumis sativus])

HSP 1 Score: 99.4 bits (246), Expect = 4.34e-26
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0


Query: 1  MSTMNGIVIFSTSSGQSKKKLIEAGILVVRVKLSCSLFRRQRVNKGERAC 50
          MSTMNGIVIFSTSSGQSKKKLIEAGILVVRVKLSCSLFRRQRVNKGERAC
Sbjct: 1  MSTMNGIVIFSTSSGQSKKKLIEAGILVVRVKLSCSLFRRQRVNKGERAC 50

[Close]

BLAST of CsGy6G018045 vs. ExPASy TrEMBL
Match: A0A0A0KCY5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G355980 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.10e-26
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0


Query: 1  MSTMNGIVIFSTSSGQSKKKLIEAGILVVRVKLSCSLFRRQRVNKGERAC 50
          MSTMNGIVIFSTSSGQSKKKLIEAGILVVRVKLSCSLFRRQRVNKGERAC
Sbjct: 1  MSTMNGIVIFSTSSGQSKKKLIEAGILVVRVKLSCSLFRRQRVNKGERAC 50

The following BLAST results are available for this feature:

BLAST of CsGy6G018045 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G018045 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN47530.1	4.34e-26	100.00	hypothetical protein Csa_019046 [Cucumis sativus]	[more]

BLAST of CsGy6G018045 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCY5	2.10e-26	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G355980 PE=4 SV=1	[more]

BLAST of CsGy6G018045 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G018045.1	CsGy6G018045.1	mRNA