CsGy6G016040 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G016040
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Protein kinase domain-containing protein
Location	Gy14Chr6: 15117825 .. 15118574 (+)
RNA-Seq Expression	CsGy6G016040
Synteny	CsGy6G016040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCAGAGAGCTATCCGTACAACAACCGACGATCCTTGCACCATAATGAACTCCACTCTATCACAAGATCAGCCTCAAGGAATTAGATTATCAATGGACGATTTCACTGCCGCTGGTGATCTTCTTCCAGTTTCCGATCCTCGTTTCTGGATAAGGAAGCGAGATCGCAATTCACGCTACAGATTCCGCGTGCATTGGATTCATTTGATTCCTTTGATTCTGCTCCTCATCCTCTTTATTCTCTGGTGGTCATCTTATCCAGGTAAATTTCCTCAATAATACATTATTATTCTGTTTATCTTAGGTACATTCACGTAATTTTCTTCAATCGATAAATCTCATCCGTTGACAATTCGTTTCTGATTCTTCTTGCATGTATAATTTAGCACTTTCTTTCACTTTCCGATATATATTCTGATTTTATCAAGAATTTTCAAGTACTTACTCTTTTTCTTGATTTCATGATCTTGTTCTTTCTTGCCTCCTCTGTTGTTGATCAGTAATTTCTAAATCGATTTACTAATACTTGTGCTCTTTTTCTCATGCGAACACATGAATTTAGCGATCAAGGATGGAGGAATTAGGGCAGTTGATGAGAAGGATCGGTTTCCGGAGGTGCCGAAGTACGTTGATCATACCGAACTTGCCGTTCTTGGAGATGCTGGAATGGATATTGCTTCGAGTCCTTTGAATCTAACCAGCGTTGGCGATCGAGATTCACGAATAATACCAAGTAAAATCGATTGA

mRNA sequence

ATGCAGCAGAGAGCTATCCGTACAACAACCGACGATCCTTGCACCATAATGAACTCCACTCTATCACAAGATCAGCCTCAAGGAATTAGATTATCAATGGACGATTTCACTGCCGCTGGTGATCTTCTTCCAGTTTCCGATCCTCGTTTCTGGATAAGGAAGCGAGATCGCAATTCACGCTACAGATTCCGCGTGCATTGGATTCATTTGATTCCTTTGATTCTGCTCCTCATCCTCTTTATTCTCTGGTGGTCATCTTATCCAGCGATCAAGGATGGAGGAATTAGGGCAGTTGATGAGAAGGATCGGTTTCCGGAGGTGCCGAAGTACGTTGATCATACCGAACTTGCCGTTCTTGGAGATGCTGGAATGGATATTGCTTCGAGTCCTTTGAATCTAACCAGCGTTGGCGATCGAGATTCACGAATAATACCAAGTAAAATCGATTGA

Coding sequence (CDS)

ATGCAGCAGAGAGCTATCCGTACAACAACCGACGATCCTTGCACCATAATGAACTCCACTCTATCACAAGATCAGCCTCAAGGAATTAGATTATCAATGGACGATTTCACTGCCGCTGGTGATCTTCTTCCAGTTTCCGATCCTCGTTTCTGGATAAGGAAGCGAGATCGCAATTCACGCTACAGATTCCGCGTGCATTGGATTCATTTGATTCCTTTGATTCTGCTCCTCATCCTCTTTATTCTCTGGTGGTCATCTTATCCAGCGATCAAGGATGGAGGAATTAGGGCAGTTGATGAGAAGGATCGGTTTCCGGAGGTGCCGAAGTACGTTGATCATACCGAACTTGCCGTTCTTGGAGATGCTGGAATGGATATTGCTTCGAGTCCTTTGAATCTAACCAGCGTTGGCGATCGAGATTCACGAATAATACCAAGTAAAATCGATTGA

Protein sequence

MQQRAIRTTTDDPCTIMNSTLSQDQPQGIRLSMDDFTAAGDLLPVSDPRFWIRKRDRNSRYRFRVHWIHLIPLILLLILFILWWSSYPAIKDGGIRAVDEKDRFPEVPKYVDHTELAVLGDAGMDIASSPLNLTSVGDRDSRIIPSKID*

Homology

[Close]

BLAST of CsGy6G016040 vs. NCBI nr
Match: XP_004148247.1 (uncharacterized protein LOC101221086 [Cucumis sativus] >KGN47331.1 hypothetical protein Csa_022941 [Cucumis sativus])

HSP 1 Score: 305 bits (780), Expect = 1.84e-104
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MQQRAIRTTTDDPCTIMNSTLSQDQPQGIRLSMDDFTAAGDLLPVSDPRFWIRKRDRNSR 60
           MQQRAIRTTTDDPCTIMNSTLSQDQPQGIRLSMDDFTAAGDLLPVSDPRFWIRKRDRNSR
Sbjct: 1   MQQRAIRTTTDDPCTIMNSTLSQDQPQGIRLSMDDFTAAGDLLPVSDPRFWIRKRDRNSR 60

Query: 61  YRFRVHWIHLIPLILLLILFILWWSSYPAIKDGGIRAVDEKDRFPEVPKYVDHTELAVLG 120
           YRFRVHWIHLIPLILLLILFILWWSSYPAIKDGGIRAVDEKDRFPEVPKYVDHTELAVLG
Sbjct: 61  YRFRVHWIHLIPLILLLILFILWWSSYPAIKDGGIRAVDEKDRFPEVPKYVDHTELAVLG 120

Query: 121 DAGMDIASSPLNLTSVGDRDSRIIPSKID 149
           DAGMDIASSPLNLTSVGDRDSRIIPSKID
Sbjct: 121 DAGMDIASSPLNLTSVGDRDSRIIPSKID 149

[Close]

BLAST of CsGy6G016040 vs. NCBI nr
Match: XP_008463866.1 (PREDICTED: uncharacterized protein LOC103501898 isoform X2 [Cucumis melo] >KAA0035282.1 uncharacterized protein E6C27_scaffold228G00740 [Cucumis melo var. makuwa] >TYK14354.1 uncharacterized protein E5676_scaffold84G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 249 bits (637), Expect = 1.18e-82
Identity = 128/150 (85.33%), Postives = 135/150 (90.00%), Query Frame = 0


Query: 1   MQQRAIRTTTDDPCTIMNSTLSQDQPQGIRLSM-DDFTAAGDLLPVSDPRFWIRKRDRNS 60
           MQQRA R TTD+ C++M ST S++ PQGIR SM DDFTAAGDLLP+SDPRF IRKRDRNS
Sbjct: 1   MQQRAFRPTTDNHCSVMISTTSRE-PQGIRSSMEDDFTAAGDLLPISDPRFSIRKRDRNS 60

Query: 61  RYRFRVHWIHLIPLILLLILFILWWSSYPAIKDGGIRAVDEKDRFPEVPKYVDHTELAVL 120
           RYRF VHWIHLIPLILLLILFILWWSSYP IKDGGIRA  EK+R PEVPKYVDHTELAVL
Sbjct: 61  RYRFHVHWIHLIPLILLLILFILWWSSYPVIKDGGIRADYEKERLPEVPKYVDHTELAVL 120

Query: 121 GDAGMDIASSPLNLTSVGDRDSRIIPSKID 149
           GDAGM IASSPLNLTSVGDRDSRIIPSKID
Sbjct: 121 GDAGMHIASSPLNLTSVGDRDSRIIPSKID 149

[Close]

BLAST of CsGy6G016040 vs. NCBI nr
Match: XP_008463865.1 (PREDICTED: uncharacterized protein LOC103501898 isoform X1 [Cucumis melo])

HSP 1 Score: 242 bits (618), Expect = 3.10e-79
Identity = 124/146 (84.93%), Postives = 131/146 (89.73%), Query Frame = 0


Query: 1   MQQRAIRTTTDDPCTIMNSTLSQDQPQGIRLSM-DDFTAAGDLLPVSDPRFWIRKRDRNS 60
           MQQRA R TTD+ C++M ST S++ PQGIR SM DDFTAAGDLLP+SDPRF IRKRDRNS
Sbjct: 1   MQQRAFRPTTDNHCSVMISTTSRE-PQGIRSSMEDDFTAAGDLLPISDPRFSIRKRDRNS 60

Query: 61  RYRFRVHWIHLIPLILLLILFILWWSSYPAIKDGGIRAVDEKDRFPEVPKYVDHTELAVL 120
           RYRF VHWIHLIPLILLLILFILWWSSYP IKDGGIRA  EK+R PEVPKYVDHTELAVL
Sbjct: 61  RYRFHVHWIHLIPLILLLILFILWWSSYPVIKDGGIRADYEKERLPEVPKYVDHTELAVL 120

Query: 121 GDAGMDIASSPLNLTSVGDRDSRIIP 145
           GDAGM IASSPLNLTSVGDRDSRIIP
Sbjct: 121 GDAGMHIASSPLNLTSVGDRDSRIIP 145

[Close]

BLAST of CsGy6G016040 vs. NCBI nr
Match: XP_038902298.1 (uncharacterized protein LOC120088933 [Benincasa hispida])

HSP 1 Score: 181 bits (460), Expect = 1.51e-55
Identity = 103/163 (63.19%), Postives = 115/163 (70.55%), Query Frame = 0


Query: 1   MQQRAI---RTTTD-DPCTIMNSTLSQDQPQGIR-------LSMDDFTAAGDLLPVSDPR 60
           MQQRA+   R T D D C IM  +    +P+G R       + MDD  A   LLP+SDPR
Sbjct: 1   MQQRALSSFRATNDHDHCNIMIFSTPTQEPRGRRSPPSRSSILMDDSNAG--LLPISDPR 60

Query: 61  FWIRKRDRNSRYRFRVHWIHLIPLILLLILFILWWSSYPA---IKDGGIRAVDEKDRFPE 120
           F  +KRD NSRYRF   WIHLIPLILLLILFILWWSSYP    IKDG I AV   D+FPE
Sbjct: 61  FSTKKRDHNSRYRFAERWIHLIPLILLLILFILWWSSYPVNMVIKDGAISAVYTNDQFPE 120

Query: 121 VPKYVDHTELAVLGDAGMDIASSPLNLTSVGDRDSRIIPSKID 149
            PKY+DH ELAVLGDAGM IASSPLN+TS+GDRD RI PSK+D
Sbjct: 121 APKYIDHVELAVLGDAGMQIASSPLNVTSIGDRDLRI-PSKVD 160

[Close]

BLAST of CsGy6G016040 vs. NCBI nr
Match: XP_022986954.1 (uncharacterized protein LOC111484535 isoform X2 [Cucurbita maxima])

HSP 1 Score: 164 bits (415), Expect = 7.88e-49
Identity = 98/155 (63.23%), Postives = 110/155 (70.97%), Query Frame = 0


Query: 1   MQQRA-----IRTTTDDPCTIMNSTLSQDQPQG-----IRLSMDDFTAAGDLLPVSDPRF 60
           MQQR+      R TTDD C+I+ S   +  PQG     IR SMDD  ++G  LPVSDP  
Sbjct: 1   MQQRSSTSSSFRATTDDHCSIIFSPAQE--PQGRCSPEIR-SMDD--SSGSFLPVSDPS- 60

Query: 61  WIRKRDRNSRYRFRVHWIHLIPLILLLILFILWWSSYPA---IKDGGIRAVDEKDRFPEV 120
             RKRD NSRY+F   WIHLIPLILLL+LFILWWSSYP    IKDGGI+AV   + FPE 
Sbjct: 61  -CRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGGIKAVYASE-FPEA 120

Query: 121 PKYVDHTELAVLGDAGMDIASSPLNLTSVGDRDSR 142
           PKY+DH ELA+LGDAGM IASSPLNLTSVG RD R
Sbjct: 121 PKYIDHVELAILGDAGMQIASSPLNLTSVGARDLR 147

[Close]

BLAST of CsGy6G016040 vs. ExPASy TrEMBL
Match: A0A0A0KHS9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301010 PE=4 SV=1)

HSP 1 Score: 305 bits (780), Expect = 8.92e-105
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MQQRAIRTTTDDPCTIMNSTLSQDQPQGIRLSMDDFTAAGDLLPVSDPRFWIRKRDRNSR 60
           MQQRAIRTTTDDPCTIMNSTLSQDQPQGIRLSMDDFTAAGDLLPVSDPRFWIRKRDRNSR
Sbjct: 1   MQQRAIRTTTDDPCTIMNSTLSQDQPQGIRLSMDDFTAAGDLLPVSDPRFWIRKRDRNSR 60

Query: 61  YRFRVHWIHLIPLILLLILFILWWSSYPAIKDGGIRAVDEKDRFPEVPKYVDHTELAVLG 120
           YRFRVHWIHLIPLILLLILFILWWSSYPAIKDGGIRAVDEKDRFPEVPKYVDHTELAVLG
Sbjct: 61  YRFRVHWIHLIPLILLLILFILWWSSYPAIKDGGIRAVDEKDRFPEVPKYVDHTELAVLG 120

Query: 121 DAGMDIASSPLNLTSVGDRDSRIIPSKID 149
           DAGMDIASSPLNLTSVGDRDSRIIPSKID
Sbjct: 121 DAGMDIASSPLNLTSVGDRDSRIIPSKID 149

[Close]

BLAST of CsGy6G016040 vs. ExPASy TrEMBL
Match: A0A5D3CTN8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00940 PE=4 SV=1)

HSP 1 Score: 249 bits (637), Expect = 5.70e-83
Identity = 128/150 (85.33%), Postives = 135/150 (90.00%), Query Frame = 0


Query: 1   MQQRAIRTTTDDPCTIMNSTLSQDQPQGIRLSM-DDFTAAGDLLPVSDPRFWIRKRDRNS 60
           MQQRA R TTD+ C++M ST S++ PQGIR SM DDFTAAGDLLP+SDPRF IRKRDRNS
Sbjct: 1   MQQRAFRPTTDNHCSVMISTTSRE-PQGIRSSMEDDFTAAGDLLPISDPRFSIRKRDRNS 60

Query: 61  RYRFRVHWIHLIPLILLLILFILWWSSYPAIKDGGIRAVDEKDRFPEVPKYVDHTELAVL 120
           RYRF VHWIHLIPLILLLILFILWWSSYP IKDGGIRA  EK+R PEVPKYVDHTELAVL
Sbjct: 61  RYRFHVHWIHLIPLILLLILFILWWSSYPVIKDGGIRADYEKERLPEVPKYVDHTELAVL 120

Query: 121 GDAGMDIASSPLNLTSVGDRDSRIIPSKID 149
           GDAGM IASSPLNLTSVGDRDSRIIPSKID
Sbjct: 121 GDAGMHIASSPLNLTSVGDRDSRIIPSKID 149

[Close]

BLAST of CsGy6G016040 vs. ExPASy TrEMBL
Match: A0A1S3CKP4 (uncharacterized protein LOC103501898 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501898 PE=4 SV=1)

HSP 1 Score: 249 bits (637), Expect = 5.70e-83
Identity = 128/150 (85.33%), Postives = 135/150 (90.00%), Query Frame = 0


Query: 1   MQQRAIRTTTDDPCTIMNSTLSQDQPQGIRLSM-DDFTAAGDLLPVSDPRFWIRKRDRNS 60
           MQQRA R TTD+ C++M ST S++ PQGIR SM DDFTAAGDLLP+SDPRF IRKRDRNS
Sbjct: 1   MQQRAFRPTTDNHCSVMISTTSRE-PQGIRSSMEDDFTAAGDLLPISDPRFSIRKRDRNS 60

Query: 61  RYRFRVHWIHLIPLILLLILFILWWSSYPAIKDGGIRAVDEKDRFPEVPKYVDHTELAVL 120
           RYRF VHWIHLIPLILLLILFILWWSSYP IKDGGIRA  EK+R PEVPKYVDHTELAVL
Sbjct: 61  RYRFHVHWIHLIPLILLLILFILWWSSYPVIKDGGIRADYEKERLPEVPKYVDHTELAVL 120

Query: 121 GDAGMDIASSPLNLTSVGDRDSRIIPSKID 149
           GDAGM IASSPLNLTSVGDRDSRIIPSKID
Sbjct: 121 GDAGMHIASSPLNLTSVGDRDSRIIPSKID 149

[Close]

BLAST of CsGy6G016040 vs. ExPASy TrEMBL
Match: A0A1S3CK66 (uncharacterized protein LOC103501898 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501898 PE=4 SV=1)

HSP 1 Score: 242 bits (618), Expect = 1.50e-79
Identity = 124/146 (84.93%), Postives = 131/146 (89.73%), Query Frame = 0


Query: 1   MQQRAIRTTTDDPCTIMNSTLSQDQPQGIRLSM-DDFTAAGDLLPVSDPRFWIRKRDRNS 60
           MQQRA R TTD+ C++M ST S++ PQGIR SM DDFTAAGDLLP+SDPRF IRKRDRNS
Sbjct: 1   MQQRAFRPTTDNHCSVMISTTSRE-PQGIRSSMEDDFTAAGDLLPISDPRFSIRKRDRNS 60

Query: 61  RYRFRVHWIHLIPLILLLILFILWWSSYPAIKDGGIRAVDEKDRFPEVPKYVDHTELAVL 120
           RYRF VHWIHLIPLILLLILFILWWSSYP IKDGGIRA  EK+R PEVPKYVDHTELAVL
Sbjct: 61  RYRFHVHWIHLIPLILLLILFILWWSSYPVIKDGGIRADYEKERLPEVPKYVDHTELAVL 120

Query: 121 GDAGMDIASSPLNLTSVGDRDSRIIP 145
           GDAGM IASSPLNLTSVGDRDSRIIP
Sbjct: 121 GDAGMHIASSPLNLTSVGDRDSRIIP 145

[Close]

BLAST of CsGy6G016040 vs. ExPASy TrEMBL
Match: A0A6J1JHI4 (uncharacterized protein LOC111484535 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484535 PE=4 SV=1)

HSP 1 Score: 164 bits (415), Expect = 3.81e-49
Identity = 98/155 (63.23%), Postives = 110/155 (70.97%), Query Frame = 0


Query: 1   MQQRA-----IRTTTDDPCTIMNSTLSQDQPQG-----IRLSMDDFTAAGDLLPVSDPRF 60
           MQQR+      R TTDD C+I+ S   +  PQG     IR SMDD  ++G  LPVSDP  
Sbjct: 1   MQQRSSTSSSFRATTDDHCSIIFSPAQE--PQGRCSPEIR-SMDD--SSGSFLPVSDPS- 60

Query: 61  WIRKRDRNSRYRFRVHWIHLIPLILLLILFILWWSSYPA---IKDGGIRAVDEKDRFPEV 120
             RKRD NSRY+F   WIHLIPLILLL+LFILWWSSYP    IKDGGI+AV   + FPE 
Sbjct: 61  -CRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGGIKAVYASE-FPEA 120

Query: 121 PKYVDHTELAVLGDAGMDIASSPLNLTSVGDRDSR 142
           PKY+DH ELA+LGDAGM IASSPLNLTSVG RD R
Sbjct: 121 PKYIDHVELAILGDAGMQIASSPLNLTSVGARDLR 147

[Close]

BLAST of CsGy6G016040 vs. TAIR 10
Match: AT4G16840.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35658.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 9.2e-06
Identity = 28/48 (58.33%), Postives = 33/48 (68.75%), Query Frame = 0


Query: 42 LLPVSDPRFWIRKRDRNSRYRFRVHWIHLIPLILLLILFILWWSSYPA 90
          LLP  DP     KR++ SR+RF  + IHLIPLILLL + ILW SSY A
Sbjct: 37 LLPRYDPNSQAGKREK-SRFRFSENVIHLIPLILLLCVAILWLSSYSA 83

The following BLAST results are available for this feature:

BLAST of CsGy6G016040 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G016040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148247.1	1.84e-104	100.00	uncharacterized protein LOC101221086 [Cucumis sativus] >KGN47331.1 hypothetical ...	[more]
XP_008463866.1	1.18e-82	85.33	PREDICTED: uncharacterized protein LOC103501898 isoform X2 [Cucumis melo] >KAA00...	[more]
XP_008463865.1	3.10e-79	84.93	PREDICTED: uncharacterized protein LOC103501898 isoform X1 [Cucumis melo]	[more]
XP_038902298.1	1.51e-55	63.19	uncharacterized protein LOC120088933 [Benincasa hispida]	[more]
XP_022986954.1	7.88e-49	63.23	uncharacterized protein LOC111484535 isoform X2 [Cucurbita maxima]	[more]

BLAST of CsGy6G016040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHS9	8.92e-105	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301010 PE=4 SV=1	[more]
A0A5D3CTN8	5.70e-83	85.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CKP4	5.70e-83	85.33	uncharacterized protein LOC103501898 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CK66	1.50e-79	84.93	uncharacterized protein LOC103501898 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1JHI4	3.81e-49	63.23	uncharacterized protein LOC111484535 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CsGy6G016040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16840.1	9.2e-06	58.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34189	TRANSMEMBRANE PROTEIN	coord: 1..147
None	No IPR available	PANTHER	PTHR34189:SF7	SERINE/THREONINE-KINASE RLCKVII PROTEIN	coord: 1..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G016040.1	CsGy6G016040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane