CsGy6G015545 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAGGGAAGTGGCGGAATTCGTTAGTAAGTGTCTAGTATGTCAGCAGGTTAAGGCACCTAGACAGAAACCAACAGGTTTGTTACAACCTTTAAGTGTGTCAGAGTGGAAGTGGGAGAATGTGTCGATGGATTTTATTTCAGGGCTGCCTAAGACCCTGAAGGGTTTCAGAGTGATTTTGGTTGTCGTAGACAGGCTTACGAAATCGGCACATTTTGTACCAGGGAAATCCACTTATACTGCTAGTAAGTGGGCACAGTTGTATTTAACTGAGGTTGTGAGACTGCATGGAGTGCCTGTATAG ATGAAAAGGGAAGTGGCGGAATTCGTTAGTAAGTGTCTAGTATGTCAGCAGGTTAAGGCACCTAGACAGAAACCAACAGGTTTGTTACAACCTTTAAGTGTGTCAGAGTGGAAGTGGGAGAATGTGTCGATGGATTTTATTTCAGGGCTGCCTAAGACCCTGAAGGGTTTCAGAGTGATTTTGGTTGTCGTAGACAGGCTTACGAAATCGGCACATTTTGTACCAGGGAAATCCACTTATACTGCTAGTAAGTGGGCACAGTTGTATTTAACTGAGGTTGTGAGACTGCATGGAGTGCCTGTATAG ATGAAAAGGGAAGTGGCGGAATTCGTTAGTAAGTGTCTAGTATGTCAGCAGGTTAAGGCACCTAGACAGAAACCAACAGGTTTGTTACAACCTTTAAGTGTGTCAGAGTGGAAGTGGGAGAATGTGTCGATGGATTTTATTTCAGGGCTGCCTAAGACCCTGAAGGGTTTCAGAGTGATTTTGGTTGTCGTAGACAGGCTTACGAAATCGGCACATTTTGTACCAGGGAAATCCACTTATACTGCTAGTAAGTGGGCACAGTTGTATTTAACTGAGGTTGTGAGACTGCATGGAGTGCCTGTATAG MKREVAEFVSKCLVCQQVKAPRQKPTGLLQPLSVSEWKWENVSMDFISGLPKTLKGFRVILVVVDRLTKSAHFVPGKSTYTASKWAQLYLTEVVRLHGVPV* Homology
BLAST of CsGy6G015545 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3) HSP 1 Score: 89.4 bits (220), Expect = 2.6e-17 Identity = 38/100 (38.00%), Postives = 62/100 (62.00%), Query Frame = 0
BLAST of CsGy6G015545 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2) HSP 1 Score: 89.4 bits (220), Expect = 2.6e-17 Identity = 38/100 (38.00%), Postives = 62/100 (62.00%), Query Frame = 0
BLAST of CsGy6G015545 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 2.1e-14 Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = 0
BLAST of CsGy6G015545 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 2.1e-14 Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = 0
BLAST of CsGy6G015545 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 2.1e-14 Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = 0
BLAST of CsGy6G015545 vs. NCBI nr
Match: KAA0045454.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 190 bits (483), Expect = 4.01e-59 Identity = 88/101 (87.13%), Postives = 96/101 (95.05%), Query Frame = 0
BLAST of CsGy6G015545 vs. NCBI nr
Match: KAA0053361.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 194 bits (493), Expect = 6.02e-59 Identity = 91/101 (90.10%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of CsGy6G015545 vs. NCBI nr
Match: KAA0032427.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 194 bits (493), Expect = 8.72e-59 Identity = 91/101 (90.10%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of CsGy6G015545 vs. NCBI nr
Match: KAA0053631.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 194 bits (493), Expect = 1.35e-58 Identity = 90/101 (89.11%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of CsGy6G015545 vs. NCBI nr
Match: KAA0043401.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 194 bits (493), Expect = 1.74e-58 Identity = 90/101 (89.11%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of CsGy6G015545 vs. ExPASy TrEMBL
Match: A0A5A7TQR2 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1770G00110 PE=4 SV=1) HSP 1 Score: 190 bits (483), Expect = 1.94e-59 Identity = 88/101 (87.13%), Postives = 96/101 (95.05%), Query Frame = 0
BLAST of CsGy6G015545 vs. ExPASy TrEMBL
Match: A0A5A7UIH1 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00150 PE=4 SV=1) HSP 1 Score: 194 bits (493), Expect = 2.92e-59 Identity = 91/101 (90.10%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of CsGy6G015545 vs. ExPASy TrEMBL
Match: A0A5A7SSN9 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2492G00090 PE=4 SV=1) HSP 1 Score: 194 bits (493), Expect = 4.22e-59 Identity = 91/101 (90.10%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of CsGy6G015545 vs. ExPASy TrEMBL
Match: A0A5A7UJG5 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold31080G00010 PE=4 SV=1) HSP 1 Score: 194 bits (493), Expect = 6.55e-59 Identity = 90/101 (89.11%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of CsGy6G015545 vs. ExPASy TrEMBL
Match: A0A5A7TPA9 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18932G00010 PE=4 SV=1) HSP 1 Score: 194 bits (493), Expect = 8.43e-59 Identity = 90/101 (89.11%), Postives = 97/101 (96.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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