CsGy6G012290 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G012290
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	histone deacetylase HDT1-like
Location	Gy14Chr6: 10684210 .. 10687783 (-)
RNA-Seq Expression	CsGy6G012290
Synteny	CsGy6G012290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTAAACATTTCCATCATCGTTTTCTCGCATTCCATTTTCTTTCGAGGCTTCTCTAAACCTAGCGTCTCTTTTTCTTACTCATCAATGGAGTTTTGGGGTAAGCTATTCTTCCTTTTCTCTCTTTTTGGTTTAACCAACTAGAGCTAATGAGGTTCATCCATGCTTTACGTTTCCCCCCACTCGTTTTGGCCTTTGTTTATCCGGTTCTCCTTGTAATATATGTGAGTGCTAATCTGTATTGTATGTCATGCTTGGTTTCTCCTTCTTTCTTCCATTCTTCTCATATCTTTCAGTTCGAGTAGGCTTTAGTTCAGAAATGATGTTTGCCTCGTTATATTTGGATTGTGAAATGTTGACAGGGGTTGTTTAGTTCGTGGCTAATGAACTAAAACTTTGTGGTTTTTGGGTTGCAGGTGTTGAAGTCAAGGCTGGTCAGTCACTTATTGTGAAACCTGGAAATGAGAAATTGATTCATCTATCACAGGTATGTTTCTTGTTATAATGATAATGTGTGTATGTGTGTTTTCTCAGTTTTACTGTAGATTCTTGGTTTAGTTAACTTTTCCCATGGACCGGATATGATGAAATGATTTTATGCAGGCAACACTAGGTGAAATAAAGAAGGAAAAAGCAAATGAAAATGTGACTATTTTTTTGAAAATTGGTGACCAGAAGCTTGTTTTGGGTATTCTCTCTGGAGAGAAGTTTCCTCAGCTCTCATTTGATCTTGTGTTTGAGAAGGAATTTGAGCTTTCCCACAATGGGAAGAGTGGAAGTGTGTACTGTGCTGGATACCAGGCTTACGGGGATGATCATGAACAATATCCTTCCTTTCAAATTTGATATTTTTTATTTGCCCTCTAGACGATAATGTGAAGCCTTTGAATTGTTTGATAAATTAACTTGACTTGTTACCTTTTATTGCCTCGTGGCCAACCCTAAAATTTGAAGTATTTAATTAGTATTTTGGAATTGTTTTCTTTTAGTTGATTAAAAATCTTAATAAATGCATCTTTAAATCAATTATCTTAGTAAGAAATTTTATAATTGTATCATATGATGTTGAAGAGACTATAATCCTATGATCATGTGTTAATTTTATAATTTGGTTTCCTAGACCTGTATCTATAAACTTGATCATGTATTACACCTAAATTTTATAAATTTTATAAAAGTCTAAAGATGGCATTTAAGAGACTATAATCGTATGATCATGTATTAATACGTATGGATAGTTATCTAAGTTAGTATGGTCAAGTATTGGCAGTCATTTAGAAAAAACATTGATGTTTTTACAATGGCTTGTAGTATTTCTCTATTTTCAGTAGTTTGCAACTTACATTGGTTTCCTTGACCTGCTCTTTTCTCCTTACCACGGATGGTTATCTTGGTAAGTTGAATGTTTTTTTTACAAACATCAGATCCATTGTCTTCGTATTTACTTCTGGCTTCTTTTATTAGTTTGAGTAGTCAATTGACTTAGTGTTTGTTATTTCTTTTAAGATTCTGATTCTGCCTCGGAAGATGAAGAACTTCCCTTGGTCTCTGCTCCAAACGGTAAAGGCATCACATTATGACAATGTTAGTATTCTTGGCTGTAGGGTGTTTTGTGCATTTATTTTGTTGTTATGTACTTTCAGGAAAACCAAGCCCGAAGGGGGTGAAGCCTGGTTTGGTTGAAAGTAATGATGCAAAGAAAGCTTCTCTGAAGAAGCCTTTGAAACCAAGCAAGGATGATGATGAAGATTCGGAGGATGATGAATCTGATGGTGATGAAGATTCAGATGACGAATCTGATGAGGTAGTATAAGAAAGATTCTCTCTCTTTTGTTGCATTCAGTAAGAACTGTTCCATACCAACCAAATATAAGTGATTCATGGCAAGAATTTTAATCAATTTGATTTTTATTTGAGTGGAAATCTTGTGTTATGGTTAGGCCCATTAAAAATTCCTTGGTTTCTATTTCCTAACAAAAGAATAAACAAAACCTTACTCCCATTGCTGATTCTGGTTGTCCTTTTCAGTTAACTTTGTGAGGTGATCAGGACATGGGATTTGATGTATTTTGGTCCATATGTCCTGTTCTGTTCTTGGGCTTCTCATTTACATGACATATTTCAACCAAGGCCATGGCCGTTTGGTTGTAATTGGATCTCTACCACAAAGGCATTATTGTCTTCTGTGAATCATGTTGCAAATATTTTTAATCGGGATTACAATAGTTTTTTCGAGGATAGTTGATGATGACAATCTGAGGGTTGAATGTTGACACGTACATTTGTGACAAATTGTAGGAAATGCTTGACGGAGACAATTCTGATGAAGAAGATGATGACTCTGAAAGTGATGAGGAGACGCCAAAGAAGGTGTTGTGGGTCAATGTGACTGTTGTCATCTTTTTGTATCTGTTTTATTGTTTAAACATTTTATCCTTAGTCGAACATAGATGGCATGATTTTGATTCTCTTGTCCTTGCAGGTTGAATCAGCCAAGAAGAGGTTGAATGAGTCTGCCACCAAGACTACACCCGTTCCTGCTAAGAAGGCAAAGTTAGCTACGCCTGAAAAGACTGGTAATTTTTTTTGGCCATTTATTTATTTCATATGGTATGGTAACATCCTGGCATATAAGCATTCTTTACAATTGTTACCTTTGCTCTAGAATATCAAATTATAGTTGTTACCATTGCTCTTTCAAGCGTTGTTTGTGCCACCAACTTTAAGTTGGTGGAGTGTTATAACTCCATTCCAATGTTTGGGATCCTTTACAGTGTGTTGAACTATTATAACCATAGTTTATTATTTGGTACCGTGTTTACTATTTTCTATCATTGTTCTCACTTCTAAATTCAATTTCCATCTAAGTACTTCCTAACCTGTCGGTTGTCTGATGCAGATTCAAAAAAGGGGGGCCATACGGCTACTCCTCATCCAGCCAAAAAAACTGGTAAAACTCCTGCTGCTAAGTTGGAGACCCCAAAATCTGGTGGCCAGTTCTCTTGCAAATCCTGTGACAGGTAACATTTGTCTTTATTGATTATTTACTGAAACTGGAAGCATTTTTATGCTGCTGATATTTCGTTCTCCCCAATATTTAGGTCGTTTGGTTCCGATGTTGCACTTCAGTCACACAGTAAAGCTAAGCATGGGGGTAAGTAAAACGAAGAGTAGCATATATTTGAACAGGTTCAATATGTTTTTTTTCTAGATAGGTTGAAATTTTGTTGAGAGTTGGGAATGTAGAACGAGAAATGATTGTTCAACCTGAGGGAGATCAATTGATTATGTTAAATGTGTGCTTGGTTTGATGGTCTAGTTATGGTGTGTACTCGCAATTATTATTCTTCCAAACAATGAATGATGTAGAATTTCGCCTTCTTCATGGGGCCTGCATTCCCCATCTTGGAACTCTATTTTTTTCTCTGTGGCAATGGAAGTCAAAAAATGTTTGGTAAAATTTTACAACAATGTTACCAACCACTGATGAGAACTGTAAAAATTTTCATTTGAATATCATGCGCTTGAATATTTGACGATGGCAAAATCAATCTTAGATTTATGATGTGTACCAC

mRNA sequence

CTTTAAACATTTCCATCATCGTTTTCTCGCATTCCATTTTCTTTCGAGGCTTCTCTAAACCTAGCGTCTCTTTTTCTTACTCATCAATGGAGTTTTGGGGTGTTGAAGTCAAGGCTGGTCAGTCACTTATTGTGAAACCTGGAAATGAGAAATTGATTCATCTATCACAGGCAACACTAGGTGAAATAAAGAAGGAAAAAGCAAATGAAAATGTGACTATTTTTTTGAAAATTGGTGACCAGAAGCTTGTTTTGGGTATTCTCTCTGGAGAGAAGTTTCCTCAGCTCTCATTTGATCTTGTGTTTGAGAAGGAATTTGAGCTTTCCCACAATGGGAAGAGTGGAAGTGTGTACTGTGCTGGATACCAGGCTTACGGGGATGATCATGAACAGGATGGTTATCTTGATTCTGATTCTGCCTCGGAAGATGAAGAACTTCCCTTGGTCTCTGCTCCAAACGGAAAACCAAGCCCGAAGGGGGTGAAGCCTGGTTTGGTTGAAAGTAATGATGCAAAGAAAGCTTCTCTGAAGAAGCCTTTGAAACCAAGCAAGGATGATGATGAAGATTCGGAGGATGATGAATCTGATGGTGATGAAGATTCAGATGACGAATCTGATGAGGAAATGCTTGACGGAGACAATTCTGATGAAGAAGATGATGACTCTGAAAGTGATGAGGAGACGCCAAAGAAGGTTGAATCAGCCAAGAAGAGGTTGAATGAGTCTGCCACCAAGACTACACCCGTTCCTGCTAAGAAGGCAAAGTTAGCTACGCCTGAAAAGACTGATTCAAAAAAGGGGGGCCATACGGCTACTCCTCATCCAGCCAAAAAAACTGGTAAAACTCCTGCTGCTAAGTTGGAGACCCCAAAATCTGGTGGCCAGTTCTCTTGCAAATCCTGTGACAGGTCGTTTGGTTCCGATGTTGCACTTCAGTCACACAGTAAAGCTAAGCATGGGGGTAAGTAAAACGAAGAGTAGCATATATTTGAACAGGTTCAATATGTTTTTTTTCTAGATAGGTTGAAATTTTGTTGAGAGTTGGGAATGTAGAACGAGAAATGATTGTTCAACCTGAGGGAGATCAATTGATTATGTTAAATGTGTGCTTGGTTTGATGGTCTAGTTATGGTGTGTACTCGCAATTATTATTCTTCCAAACAATGAATGATGTAGAATTTCGCCTTCTTCATGGGGCCTGCATTCCCCATCTTGGAACTCTATTTTTTTCTCTGTGGCAATGGAAGTCAAAAAATGTTTGGTAAAATTTTACAACAATGTTACCAACCACTGATGAGAACTGTAAAAATTTTCATTTGAATATCATGCGCTTGAATATTTGACGATGGCAAAATCAATCTTAGATTTATGATGTGTACCAC

Coding sequence (CDS)

ATGGAGTTTTGGGGTGTTGAAGTCAAGGCTGGTCAGTCACTTATTGTGAAACCTGGAAATGAGAAATTGATTCATCTATCACAGGCAACACTAGGTGAAATAAAGAAGGAAAAAGCAAATGAAAATGTGACTATTTTTTTGAAAATTGGTGACCAGAAGCTTGTTTTGGGTATTCTCTCTGGAGAGAAGTTTCCTCAGCTCTCATTTGATCTTGTGTTTGAGAAGGAATTTGAGCTTTCCCACAATGGGAAGAGTGGAAGTGTGTACTGTGCTGGATACCAGGCTTACGGGGATGATCATGAACAGGATGGTTATCTTGATTCTGATTCTGCCTCGGAAGATGAAGAACTTCCCTTGGTCTCTGCTCCAAACGGAAAACCAAGCCCGAAGGGGGTGAAGCCTGGTTTGGTTGAAAGTAATGATGCAAAGAAAGCTTCTCTGAAGAAGCCTTTGAAACCAAGCAAGGATGATGATGAAGATTCGGAGGATGATGAATCTGATGGTGATGAAGATTCAGATGACGAATCTGATGAGGAAATGCTTGACGGAGACAATTCTGATGAAGAAGATGATGACTCTGAAAGTGATGAGGAGACGCCAAAGAAGGTTGAATCAGCCAAGAAGAGGTTGAATGAGTCTGCCACCAAGACTACACCCGTTCCTGCTAAGAAGGCAAAGTTAGCTACGCCTGAAAAGACTGATTCAAAAAAGGGGGGCCATACGGCTACTCCTCATCCAGCCAAAAAAACTGGTAAAACTCCTGCTGCTAAGTTGGAGACCCCAAAATCTGGTGGCCAGTTCTCTTGCAAATCCTGTGACAGGTCGTTTGGTTCCGATGTTGCACTTCAGTCACACAGTAAAGCTAAGCATGGGGGTAAGTAA

Protein sequence

MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILSGEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEQDGYLDSDSASEDEELPLVSAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDESDEEMLDGDNSDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPEKTDSKKGGHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKHGGK*

Homology

[Close]

BLAST of CsGy6G012290 vs. ExPASy Swiss-Prot
Match: Q8LJS2 (Histone deacetylase HDT1 OS=Glycine max OX=3847 GN=HDT1 PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 5.2e-58
Identity = 161/302 (53.31%), Postives = 196/302 (64.90%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGN--EKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGI 60
           MEFWGVEVK GQ++ V P +  +  IH+SQ  LGE KK+K NE V ++LK+G+QK+VLG 
Sbjct: 1   MEFWGVEVKVGQTVTVDPMDPVDSYIHISQVALGEAKKDKPNEPVVLYLKVGEQKIVLGT 60

Query: 61  LSGEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAY-GDDHEQDGYLDSDSASEDEEL 120
           LS +  P LS DLV + + ELSH  KS SV+  GY+   G+D+  D    SDS+ EDEEL
Sbjct: 61  LSRDGIPHLSLDLVLDSDSELSHTSKSASVFFCGYKVLTGNDNASD---FSDSSEEDEEL 120

Query: 121 PLVSAPNGKPSPK--GVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDE 180
            L    NGKP  K  G K      +  K  +  K   P KD+D+DS DDESD D   +DE
Sbjct: 121 ALEGQDNGKPELKAEGAKVTKPSKSIPKIGAPAKAADPKKDEDDDS-DDESDDDLAGEDE 180

Query: 181 --SDEEMLDGDNSDEEDDDSESDEETP-KKVESAKKRLNESATKTTPVPAKKAKLATPEK 240
             S +EM D  NS+EE D    DEETP KKV+  KKR NESA K TP+ AKKAK ATPEK
Sbjct: 181 SGSSDEMDDDSNSEEESDG--DDEETPAKKVDQGKKRPNESAAK-TPISAKKAKTATPEK 240

Query: 241 TDSKKGGHTATPHPAKKTGKTP-AAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKHG 294
           TD KK  H ATPHP+KK GKTP + K +TP S GQ SC SC +SF ++  LQ H KAKHG
Sbjct: 241 TDGKKSVHVATPHPSKKGGKTPNSTKGQTPNSAGQLSCASCKKSFTNEAGLQQHKKAKHG 295

[Close]

BLAST of CsGy6G012290 vs. ExPASy Swiss-Prot
Match: Q6V9I6 (Histone deacetylase HDT1 OS=Solanum chacoense OX=4108 GN=HDT1 PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.0e-57
Identity = 145/291 (49.83%), Postives = 189/291 (64.95%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60
           MEFWG EVK+G+ L V+PG+  ++HLSQA+LGE+KK+K +E+V + + I  +KLVLG L+
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDK-SESVCLSVNIDGKKLVLGTLN 60

Query: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEQDGYLDSDSASEDEELPLV 120
            EK PQ  FDLVF+++FELSHN KSGSVY  GY+A     E++   D D    DE++PL 
Sbjct: 61  SEKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEEEDDED-DYDESDEDIPLT 120

Query: 121 SAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDESDEEM 180
            A +GKP PK         + A      + ++P+KDD+++S DD+               
Sbjct: 121 LANSGKPEPKEAGKSNAGKDSASGKQKVRIVEPTKDDEDESSDDD--------------- 180

Query: 181 LDGDNSDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPEKTDSKK-GG 240
            D D  ++EDD  +S+EETPKK E AK+R  +SATK TPV  KKAKL TP+KTD KK GG
Sbjct: 181 -DSDMGEDEDDSDDSEEETPKKAEPAKRRKADSATK-TPVTDKKAKLTTPQKTDGKKGGG 240

Query: 241 HTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKH 291
           H ATPHP+K+  K       TPKS G   CK C+RSFGS+ AL SHSKAKH
Sbjct: 241 HVATPHPSKQASK-------TPKSAGSHHCKPCNRSFGSEGALDSHSKAKH 265

[Close]

BLAST of CsGy6G012290 vs. ExPASy Swiss-Prot
Match: Q9M4U5 (Histone deacetylase HDT2 OS=Zea mays OX=4577 GN=HDT2 PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 4.9e-48
Identity = 152/312 (48.72%), Postives = 205/312 (65.71%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60
           MEFWG+EVK G ++  +PG+  ++H+SQA LGE KK   +++  +++K+ D+KL +G LS
Sbjct: 1   MEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK---SDSALMYVKVDDKKLAIGTLS 60

Query: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEQDGYLDSDSASEDEELPL- 120
            +K+PQ+ FDLVF KEFELSH  K+ SV+ +GY+   +   +   +D DS  E+EEL + 
Sbjct: 61  IDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKV--EQPIEGDEMDLDSEDEEEELNIP 120

Query: 121 VSAPNGKPSPKGVKPGLVE--SNDAKKASLKKPLKPSKDDDEDSEDDES-DGDEDSDDES 180
           V   NGK   K  +    +  +  A K+SL    K SKDD +DS++DES D DED  D+S
Sbjct: 121 VIKENGKADGKEEQKNQEKAVAATASKSSLGLE-KKSKDDSDDSDEDESDDSDEDDSDDS 180

Query: 181 DE------EMLDGDNSDEED--DDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLA 240
           DE      +  D D+SDE+D  DD E +  TPKK E+ KKR  E+A K TP+  KKAK+A
Sbjct: 181 DEGEGLSPDEGDDDSSDEDDTSDDDEEETPTPKKPEAGKKRGAENALK-TPLSDKKAKVA 240

Query: 241 TP--EKTDSKKGG-HTATPHPAKKTGKTPA--AKL--ETPKSGGQFSCKSCDRSFGSDVA 294
           TP  +KT  KKG  H ATPHPAK  GKTPA   KL  ++PKSGG   CKSC ++F S++A
Sbjct: 241 TPPAQKTGGKKGATHVATPHPAK--GKTPANNDKLTEKSPKSGGSVPCKSCSKTFNSEMA 300

[Close]

BLAST of CsGy6G012290 vs. ExPASy Swiss-Prot
Match: Q9M4U4 (Histone deacetylase HDT3 OS=Zea mays OX=4577 GN=HDT3 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.7e-46
Identity = 147/309 (47.57%), Postives = 185/309 (59.87%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60
           MEFWG+EVK G ++  +PG   ++HLSQA LGE KK   ++N  +++KI DQKL +G LS
Sbjct: 1   MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKK---SDNALMYVKIDDQKLAIGTLS 60

Query: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEQDGYLDSDSASEDEELPLV 120
            +K P + FDL+F+KEFELSH  K+ SV+  GY+      E +  +D DS  EDEEL + 
Sbjct: 61  VDKNPHIQFDLIFDKEFELSHTSKTTSVFFTGYKVEQPFEEDE--MDLDSEDEDEELNVP 120

Query: 121 SA-PNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDESDE- 180
           +   NGK   K  K    E   A  +      K SKDDD+  ED+  D DED  D+SDE 
Sbjct: 121 AVKENGKADEK--KQKSQEKAVAAPSKSSPDSKKSKDDDDSDEDETDDSDEDETDDSDEG 180

Query: 181 ---EMLDGDNSDEED--DDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATP--E 240
              E  D D+SDE+D  DD E D  TPKK E  KKR  ES+   TP+  KKAK+ATP  +
Sbjct: 181 LSPEEGDDDSSDEDDTSDDEEEDTPTPKKPEVGKKRAAESSVLKTPLSDKKAKVATPSSQ 240

Query: 241 KTDSKKGG--HTATPHPAK-----KTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQS 294
           KT  KKG   H ATPHPAK        K+  +    PKSG    CKSC +SF S+ A Q+
Sbjct: 241 KTGGKKGAAVHVATPHPAKGKTIVNNDKSVKSPKSAPKSG--VPCKSCSKSFISETAPQA 300

[Close]

BLAST of CsGy6G012290 vs. ExPASy Swiss-Prot
Match: O24591 (Histone deacetylase HDT1 OS=Zea mays OX=4577 GN=HDT1 PE=1 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 4.6e-46
Identity = 145/307 (47.23%), Postives = 183/307 (59.61%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60
           MEFWG+EVK G ++  +PG   ++HLSQA LGE KK   ++N  +++KI DQKL +G LS
Sbjct: 1   MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKK---SDNALMYVKIDDQKLAIGTLS 60

Query: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEQDGYLDSDSASEDEELPL- 120
            +K P + FDL+F+KEFELSH  K+ SV+  GY+      E +  +D DS  EDEEL + 
Sbjct: 61  VDKNPHIQFDLIFDKEFELSHTSKTTSVFFTGYKVEQPFEEDE--MDLDSEDEDEELNVP 120

Query: 121 VSAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDESDE- 180
           V   NGK   K  K    E   A  +      K SKDDD+  ED+  D DED  D+SDE 
Sbjct: 121 VVKENGKADEK--KQKSQEKAVAAPSKSSPDSKKSKDDDDSDEDETDDSDEDETDDSDEG 180

Query: 181 ---EMLDGDNSDEED--DDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATP--E 240
              E  D D+SDE+D  DD E D  TPKK E  KKR  ES+   TP+  KKAK+ATP  +
Sbjct: 181 LSSEEGDDDSSDEDDTSDDEEEDTPTPKKPEVGKKRPAESSVLKTPLSDKKAKVATPSSQ 240

Query: 241 KTDSKKGG--HTATPHPAK-----KTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQS 292
           KT  KKG   H ATPHPAK        K+  +    PKSGG   CK C +SF S+ ALQ+
Sbjct: 241 KTGGKKGAAVHVATPHPAKGKTIVNNDKSVKSPKSAPKSGGSVPCKPCSKSFISETALQA 300

[Close]

BLAST of CsGy6G012290 vs. NCBI nr
Match: XP_004145780.1 (histone deacetylase HDT1 isoform X2 [Cucumis sativus])

HSP 1 Score: 539 bits (1388), Expect = 2.26e-192
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60
           MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS
Sbjct: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60

Query: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEQDGYLDSDSASEDEELPLV 120
           GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEQDGYLDSDSASEDEELPLV
Sbjct: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEQDGYLDSDSASEDEELPLV 120

Query: 121 SAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDESDEEM 180
           SAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDESDEEM
Sbjct: 121 SAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDESDEEM 180

Query: 181 LDGDNSDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPEKTDSKKGGH 240
           LDGDNSDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPEKTDSKKGGH
Sbjct: 181 LDGDNSDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPEKTDSKKGGH 240

Query: 241 TATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKHGGK 293
           TATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKHGGK
Sbjct: 241 TATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKHGGK 293

[Close]

BLAST of CsGy6G012290 vs. NCBI nr
Match: XP_011657054.1 (histone deacetylase HDT1 isoform X1 [Cucumis sativus])

HSP 1 Score: 532 bits (1371), Expect = 9.14e-190
Identity = 292/294 (99.32%), Postives = 292/294 (99.32%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60
           MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS
Sbjct: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60

Query: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEQ-DGYLDSDSASEDEELPL 120
           GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHE  DGYLDSDSASEDEELPL
Sbjct: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEHTDGYLDSDSASEDEELPL 120

Query: 121 VSAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDESDEE 180
           VSAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDESDEE
Sbjct: 121 VSAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDESDEE 180

Query: 181 MLDGDNSDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPEKTDSKKGG 240
           MLDGDNSDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPEKTDSKKGG
Sbjct: 181 MLDGDNSDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPEKTDSKKGG 240

Query: 241 HTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKHGGK 293
           HTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKHGGK
Sbjct: 241 HTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKHGGK 294

[Close]

BLAST of CsGy6G012290 vs. NCBI nr
Match: XP_008458629.1 (PREDICTED: histone deacetylase HDT1-like [Cucumis melo])

HSP 1 Score: 488 bits (1257), Expect = 2.22e-172
Identity = 271/295 (91.86%), Postives = 281/295 (95.25%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60
           MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKK+KA+ENVTIFLKIGDQKLVLGILS
Sbjct: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60

Query: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEQDGYLDSDSASEDEELPLV 120
            EKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHE DGYLDSD+ S+DEELPL 
Sbjct: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEHDGYLDSDAGSDDEELPLA 120

Query: 121 SAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDESDEEM 180
           SA NGKPS K VKPGLVESN+AKKASLKKPLKPSKD+D+ SEDDESD DEDSDDESDEEM
Sbjct: 121 SAQNGKPSSKDVKPGLVESNNAKKASLKKPLKPSKDEDDVSEDDESDDDEDSDDESDEEM 180

Query: 181 LDGDN--SDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPEKTDSKKG 240
           L+GD+  SDEEDDDSESDEETPKKVESAKKRLNESATKTTP+PAKKAKLATPEKTDSKKG
Sbjct: 181 LEGDSGDSDEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKKAKLATPEKTDSKKG 240

Query: 241 GHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKHGGK 293
           GHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSF SD ALQSHSKAKHG K
Sbjct: 241 GHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFVSDGALQSHSKAKHGAK 295

[Close]

BLAST of CsGy6G012290 vs. NCBI nr
Match: KAE8646904.1 (hypothetical protein Csa_020859 [Cucumis sativus])

HSP 1 Score: 482 bits (1240), Expect = 3.87e-170
Identity = 272/293 (92.83%), Postives = 273/293 (93.17%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60
           MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS
Sbjct: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60

Query: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEQDGYLDSDSASEDEELPLV 120
           GEKFPQLSFDLVFEKEFELSHNGKSG+                    SDSASEDEELPLV
Sbjct: 61  GEKFPQLSFDLVFEKEFELSHNGKSGN--------------------SDSASEDEELPLV 120

Query: 121 SAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDESDEEM 180
           SAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDESDEEM
Sbjct: 121 SAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDESDEEM 180

Query: 181 LDGDNSDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPEKTDSKKGGH 240
           LDGDNSDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPEKTDSKKGGH
Sbjct: 181 LDGDNSDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPEKTDSKKGGH 240

Query: 241 TATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKHGGK 293
           TATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKHGGK
Sbjct: 241 TATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKHGGK 273

[Close]

BLAST of CsGy6G012290 vs. NCBI nr
Match: XP_023513047.1 (histone deacetylase HDT1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 424 bits (1089), Expect = 1.00e-146
Identity = 243/300 (81.00%), Postives = 263/300 (87.67%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60
           MEFWGVEVK+G+ L+VKPG +K +HLSQATLGEIKK+KANENVTIFLKIGDQKLVLGILS
Sbjct: 1   MEFWGVEVKSGKPLVVKPGIQKYLHLSQATLGEIKKDKANENVTIFLKIGDQKLVLGILS 60

Query: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEQDGYLDSDSASEDEELPLV 120
            EKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQA+ +D EQDGY DSDS SEDEEL L 
Sbjct: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAFAEDQEQDGYFDSDSGSEDEELALP 120

Query: 121 SAPNGKPSPKGVKPGLVESNDAKKASLKKP----LKPSKD-DDEDSEDDESDGDEDSDDE 180
            A NGKPS K  K    +SN AK ASLKKP    L+PSKD DDE  +DDESD DEDSDDE
Sbjct: 121 PAQNGKPSQKEEKSISDKSNGAKAASLKKPNVKPLEPSKDEDDESDDDDESDEDEDSDDE 180

Query: 181 SDEEML--DGDNSDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPEKT 240
           SDEEML  DG +SD+EDDDS+SDEETPKK+E  KKR NESATK+TP+PAKKAKLA+P KT
Sbjct: 181 SDEEMLNADGGDSDDEDDDSDSDEETPKKIEPTKKRSNESATKSTPLPAKKAKLASPGKT 240

Query: 241 DSKKGGHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKHGGK 293
           DSKKGGHTATPHPAKKTGKTPAAKLE+PKSGGQFSCKSCDR+FGSD ALQSHSKAKHGGK
Sbjct: 241 DSKKGGHTATPHPAKKTGKTPAAKLESPKSGGQFSCKSCDRAFGSDGALQSHSKAKHGGK 300

[Close]

BLAST of CsGy6G012290 vs. ExPASy TrEMBL
Match: A0A0A0KB05 (Histone deacetylase 2a OS=Cucumis sativus OX=3659 GN=Csa_6G150540 PE=3 SV=1)

HSP 1 Score: 493 bits (1270), Expect = 1.16e-174
Identity = 280/302 (92.72%), Postives = 281/302 (93.05%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60
           MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS
Sbjct: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60

Query: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVY---------CAGYQAYGDDHEQDGYLDSDSA 120
           GEKFPQLSFDLVFEKEFELSHNGKSGSV          C+           DGYLDSDSA
Sbjct: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVSLQLTLVSLTCSFLLT------TDGYLDSDSA 120

Query: 121 SEDEELPLVSAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDED 180
           SEDEELPLVSAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDED
Sbjct: 121 SEDEELPLVSAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDED 180

Query: 181 SDDESDEEMLDGDNSDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPE 240
           SDDESDEEMLDGDNSDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPE
Sbjct: 181 SDDESDEEMLDGDNSDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPE 240

Query: 241 KTDSKKGGHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKHG 293
           KTDSKKGGHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKHG
Sbjct: 241 KTDSKKGGHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKHG 296

[Close]

BLAST of CsGy6G012290 vs. ExPASy TrEMBL
Match: A0A1S3C9I8 (histone deacetylase HDT1-like OS=Cucumis melo OX=3656 GN=LOC103497976 PE=3 SV=1)

HSP 1 Score: 488 bits (1257), Expect = 1.07e-172
Identity = 271/295 (91.86%), Postives = 281/295 (95.25%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60
           MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKK+KA+ENVTIFLKIGDQKLVLGILS
Sbjct: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60

Query: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEQDGYLDSDSASEDEELPLV 120
            EKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHE DGYLDSD+ S+DEELPL 
Sbjct: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEHDGYLDSDAGSDDEELPLA 120

Query: 121 SAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDESDEEM 180
           SA NGKPS K VKPGLVESN+AKKASLKKPLKPSKD+D+ SEDDESD DEDSDDESDEEM
Sbjct: 121 SAQNGKPSSKDVKPGLVESNNAKKASLKKPLKPSKDEDDVSEDDESDDDEDSDDESDEEM 180

Query: 181 LDGDN--SDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPEKTDSKKG 240
           L+GD+  SDEEDDDSESDEETPKKVESAKKRLNESATKTTP+PAKKAKLATPEKTDSKKG
Sbjct: 181 LEGDSGDSDEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKKAKLATPEKTDSKKG 240

Query: 241 GHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKHGGK 293
           GHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSF SD ALQSHSKAKHG K
Sbjct: 241 GHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFVSDGALQSHSKAKHGAK 295

[Close]

BLAST of CsGy6G012290 vs. ExPASy TrEMBL
Match: A0A6J1FU30 (histone deacetylase HDT1-like OS=Cucurbita moschata OX=3662 GN=LOC111448146 PE=3 SV=1)

HSP 1 Score: 423 bits (1088), Expect = 6.89e-147
Identity = 243/300 (81.00%), Postives = 263/300 (87.67%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60
           MEFWGVEVK+G+ L+VKPG +K +HLSQATLGEIKK+KANENVTIFLKIGDQKLVLGILS
Sbjct: 1   MEFWGVEVKSGKPLVVKPGIQKYLHLSQATLGEIKKDKANENVTIFLKIGDQKLVLGILS 60

Query: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEQDGYLDSDSASEDEELPLV 120
            EKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQA+ +D EQDGY DSDS SEDEEL L 
Sbjct: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAFAEDQEQDGYFDSDSGSEDEELALP 120

Query: 121 SAPNGKPSPKGVKPGLVESNDAKKASLKKP----LKPSKD-DDEDSEDDESDGDEDSDDE 180
            A NGKPS K  K    +SN AK ASLKKP    L+PSKD DDE  +DDESD DEDSDDE
Sbjct: 121 PAQNGKPSQKEEKSISDKSNGAKAASLKKPNVKPLEPSKDEDDESDDDDESDEDEDSDDE 180

Query: 181 SDEEMLDGDN--SDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPEKT 240
           SDEEML+ D+  SD+EDDDS+SDEETPKK+E  KKR NESATKTTP+PAKKAKLA+P KT
Sbjct: 181 SDEEMLNADSGDSDDEDDDSDSDEETPKKIEPTKKRPNESATKTTPLPAKKAKLASPGKT 240

Query: 241 DSKKGGHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKHGGK 293
           DSKKGGHTATPHPAKKTGKTPAAKLE+PKSGGQFSCKSCDR+FGSD ALQSHSKAKHGGK
Sbjct: 241 DSKKGGHTATPHPAKKTGKTPAAKLESPKSGGQFSCKSCDRAFGSDGALQSHSKAKHGGK 300

[Close]

BLAST of CsGy6G012290 vs. ExPASy TrEMBL
Match: A0A6J1JAV1 (histone deacetylase HDT1-like OS=Cucurbita maxima OX=3661 GN=LOC111484116 PE=3 SV=1)

HSP 1 Score: 417 bits (1073), Expect = 1.32e-144
Identity = 240/300 (80.00%), Postives = 260/300 (86.67%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60
           MEFWGVEVK+G+ L+VKPG +K +HLSQATLGEIKK+KANENVTIFLKIG QKLVLGILS
Sbjct: 1   MEFWGVEVKSGKPLVVKPGIQKYLHLSQATLGEIKKDKANENVTIFLKIGGQKLVLGILS 60

Query: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEQDGYLDSDSASEDEELPLV 120
            EKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQA+ +D E DGY DSDS SEDEEL L 
Sbjct: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAFAEDQEHDGYFDSDSGSEDEELALP 120

Query: 121 SAPNGKPSPKGVKPGLVESNDAKKASLKKP----LKPSKD-DDEDSEDDESDGDEDSDDE 180
            A NGKPS K  K    +SN AK ASLKKP    L+PSKD DDE  EDDESD D+DSDDE
Sbjct: 121 PAQNGKPSQKEEKSISDKSNGAKAASLKKPNVKPLEPSKDEDDESDEDDESDEDDDSDDE 180

Query: 181 SDEEMLDGDN--SDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPEKT 240
           SDEEML+ D+  SD+EDDDS+SDEETPKK+E  KKR NESATKTTP+PAKKAKLA+P KT
Sbjct: 181 SDEEMLNADSGDSDDEDDDSDSDEETPKKIEPTKKRSNESATKTTPLPAKKAKLASPGKT 240

Query: 241 DSKKGGHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKHGGK 293
           DSKKGGHTATPHPAKKTGKTP AKLE+PKSGGQFSCKSCDR+FGSD ALQSHSKAKHGGK
Sbjct: 241 DSKKGGHTATPHPAKKTGKTPVAKLESPKSGGQFSCKSCDRAFGSDGALQSHSKAKHGGK 300

[Close]

BLAST of CsGy6G012290 vs. ExPASy TrEMBL
Match: A0A6J1H225 (histone deacetylase HDT1-like OS=Cucurbita moschata OX=3662 GN=LOC111459657 PE=3 SV=1)

HSP 1 Score: 392 bits (1006), Expect = 1.85e-134
Identity = 231/299 (77.26%), Postives = 250/299 (83.61%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60
           MEFWGVEVK GQSL+VKPG ++ +HLSQATLGE KK+KANENVTIFLKIG QKLVLGILS
Sbjct: 1   MEFWGVEVKPGQSLVVKPGIQQYLHLSQATLGETKKDKANENVTIFLKIGGQKLVLGILS 60

Query: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEQDGYLDSDSASEDEELPLV 120
            EKFPQLSFDLVFEKEFELSHNGK GSVYCAGYQAY +D +   Y DSDS SEDEEL L 
Sbjct: 61  AEKFPQLSFDLVFEKEFELSHNGKGGSVYCAGYQAYAEDQDPGDYFDSDSGSEDEELELP 120

Query: 121 SAPNGKPSPKGVKPGLVESNDAKKASLKK----PLKPSKDDDEDSEDDESDGDEDSDDES 180
            A NGK + K  K    +SN AK  SLKK    PLKPSKD+D+  +DDESD DED DDES
Sbjct: 121 LAQNGKATQKE-KAIADKSNAAKALSLKKSDAKPLKPSKDEDDSEDDDESDEDEDFDDES 180

Query: 181 DEEMLDGDNSD--EEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPEKTD 240
           DEEML+ D+SD  +EDDD+ESDEETPKKVE  KKR NESA+KTTP+PAKKAKLA+PEKTD
Sbjct: 181 DEEMLNADSSDSDDEDDDTESDEETPKKVEPTKKRPNESASKTTPLPAKKAKLASPEKTD 240

Query: 241 SKKGGHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKHGGK 293
           SKKGGHTATPHP KK  KTPA K ETPKSGGQFSCKSCDRSFGSD ALQSHSKAKHGGK
Sbjct: 241 SKKGGHTATPHPTKKNAKTPA-KSETPKSGGQFSCKSCDRSFGSDGALQSHSKAKHGGK 297

[Close]

BLAST of CsGy6G012290 vs. TAIR 10
Match: AT5G03740.1 (histone deacetylase 2C )

HSP 1 Score: 181.4 bits (459), Expect = 1.0e-45
Identity = 131/311 (42.12%), Postives = 182/311 (58.52%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60
           MEFWGVEVK G+ L + PG ++L+H+SQ  LGE  K    E + +++ +G  KL++G LS
Sbjct: 1   MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGE-SKNNVTEPIQLYVTVGSDKLLIGTLS 60

Query: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEQDGYLDSDSASEDEELPLV 120
            EKFPQLS ++V E+ F LSH  K+GSV+ +GY+    D E +  +D            +
Sbjct: 61  HEKFPQLSTEIVLERNFALSHTWKNGSVFFSGYKVDASDPEPEDLIDDQ----------L 120

Query: 121 SAPNGKPSPKGVKPGLVESNDAKKASLKKP---LKPSKDDDEDSEDDESDGDEDSDDESD 180
            A   K +PK           AK+ + + P   +K  +DDD D  +++S  D+DS++  D
Sbjct: 121 EAAGFKAAPKSA---------AKQVNFQLPNEDVKAKQDDDADGSEEDSSDDDDSENSGD 180

Query: 181 EE---------MLDGDNSDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLA 240
           EE           + D+SD+E+DDS S+EETPKK E  KKR  E  +   P   KKAK  
Sbjct: 181 EEEEKVTAESDSEEDDSSDDEEDDS-SEEETPKKPEEPKKRSAEPNSSKNPASNKKAKFV 240

Query: 241 TPEKTDSKKGG-HTATPHPAKKTGKT--------PAAKLETPKSGGQFSCKSCDRSFGSD 291
           TP+KTDSKK   H ATPHP+K+ GK          + + +TPKS G F CKSC R+F S+
Sbjct: 241 TPQKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSAGAFGCKSCTRTFTSE 290

[Close]

BLAST of CsGy6G012290 vs. TAIR 10
Match: AT3G44750.1 (histone deacetylase 3 )

HSP 1 Score: 165.6 bits (418), Expect = 5.9e-41
Identity = 133/291 (45.70%), Postives = 169/291 (58.08%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60
           MEFWG+EVK+G+ + V P    LIH+SQA+LGE K +K  E V + +K+G+Q LVLG LS
Sbjct: 1   MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKK-GEFVPLHVKVGNQNLVLGTLS 60

Query: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEQDGYLDSDSASEDEELPLV 120
            E  PQL  DLVF+KEFELSH    GSVY  GY+    + E  GY + +   E+EE+P  
Sbjct: 61  TENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKT--PNIEPQGYSEEEE-EEEEEVPAG 120

Query: 121 SAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDESDEEM 180
           +A      PK           AK A     +KP+ DD+E              DESD + 
Sbjct: 121 NAAKAVAKPK-----------AKPAE----VKPAVDDEE--------------DESDSDG 180

Query: 181 LDGDNSDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLA-TPEKTDSKKGG 240
           +D D+SD E  DSE +E TPKK  S+KKR NE+  K  PV AKKAK+A TP+KTD KK G
Sbjct: 181 MDEDDSDGE--DSEEEEPTPKKPASSKKRANETTPK-APVSAKKAKVAVTPQKTDEKKKG 240

Query: 241 HTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKH 291
                      GK   A  ++PKS  Q SC SC ++F S  AL+SH+KAKH
Sbjct: 241 -----------GK---AANQSPKSASQVSCGSCKKTFNSGNALESHNKAKH 241

[Close]

BLAST of CsGy6G012290 vs. TAIR 10
Match: AT3G44750.2 (histone deacetylase 3 )

HSP 1 Score: 165.2 bits (417), Expect = 7.7e-41
Identity = 134/291 (46.05%), Postives = 168/291 (57.73%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60
           MEFWG+EVK+G+ + V P    LIH+SQA+LGE K +K  E V + +K+G+Q LVLG LS
Sbjct: 1   MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKK-GEFVPLHVKVGNQNLVLGTLS 60

Query: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEQDGYLDSDSASEDEELPLV 120
            E  PQL  DLVF+KEFELSH    GSVY  GY+    + E  GY    S  E+EE+P  
Sbjct: 61  TENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKT--PNIEPQGY----SEEEEEEVPAG 120

Query: 121 SAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDESDEEM 180
           +A      PK           AK A     +KP+ DD+E              DESD + 
Sbjct: 121 NAAKAVAKPK-----------AKPAE----VKPAVDDEE--------------DESDSDG 180

Query: 181 LDGDNSDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLA-TPEKTDSKKGG 240
           +D D+SD E  DSE +E TPKK  S+KKR NE+  K  PV AKKAK+A TP+KTD KK G
Sbjct: 181 MDEDDSDGE--DSEEEEPTPKKPASSKKRANETTPK-APVSAKKAKVAVTPQKTDEKKKG 238

Query: 241 HTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSFGSDVALQSHSKAKH 291
                      GK   A  ++PKS  Q SC SC ++F S  AL+SH+KAKH
Sbjct: 241 -----------GK---AANQSPKSASQVSCGSCKKTFNSGNALESHNKAKH 238

[Close]

BLAST of CsGy6G012290 vs. TAIR 10
Match: AT5G22650.2 (histone deacetylase 2B )

HSP 1 Score: 164.9 bits (416), Expect = 1.0e-40
Identity = 127/279 (45.52%), Postives = 171/279 (61.29%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60
           MEFWGV V    +  V P  + L+H+SQA+L      K+ E+V + + +G  KLV+G LS
Sbjct: 1   MEFWGVAVTPKNATKVTPEEDSLVHISQASLD--CTVKSGESVVLSVTVGGAKLVIGTLS 60

Query: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEQDGYLDSDSASEDEELPLV 120
            +KFPQ+SFDLVF+KEFELSH+G   +V+  GY++   + EQD +  SD     E +P  
Sbjct: 61  QDKFPQISFDLVFDKEFELSHSGTKANVHFIGYKS--PNIEQDDFTSSDDEDVPEAVP-A 120

Query: 121 SAPNGKPSPKGVKPGLVESN---DAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDES- 180
            AP    +       +V+++    AK A +K   +  + D+ED  DDE + +ED D E  
Sbjct: 121 PAPTAVTANGNAGAAVVKADTKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDDSEKG 180

Query: 181 -DEEMLDGDNSDEEDDDSESDEETPKKVESA-KKRLNESATKTTPVPAKKAKLA-----T 240
            D +  D D+ +EED + E +EETPKK E   KKR NES +K TPV  KKAK A     T
Sbjct: 181 MDVDEDDSDDDEEEDSEDEEEEETPKKPEPINKKRPNESVSK-TPVSGKKAKPAAAPAST 240

Query: 241 PEKTDSKKGGHTATPHPAKKTGKTPAAKLETPKSGGQFS 269
           P+KT+ KKGGHTATPHPAKK GK+P    ++PKSGGQ S
Sbjct: 241 PQKTEKKKGGHTATPHPAKKGGKSPVNANQSPKSGGQSS 273

[Close]

BLAST of CsGy6G012290 vs. TAIR 10
Match: AT5G22650.1 (histone deacetylase 2B )

HSP 1 Score: 160.2 bits (404), Expect = 2.5e-39
Identity = 127/280 (45.36%), Postives = 171/280 (61.07%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60
           MEFWGV V    +  V P  + L+H+SQA+L      K+ E+V + + +G  KLV+G LS
Sbjct: 1   MEFWGVAVTPKNATKVTPEEDSLVHISQASLD--CTVKSGESVVLSVTVGGAKLVIGTLS 60

Query: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEQDGYLDSDSASEDEELPLV 120
            +KFPQ+SFDLVF+KEFELSH+G   +V+  GY++   + EQD +  SD     E +P  
Sbjct: 61  QDKFPQISFDLVFDKEFELSHSGTKANVHFIGYKS--PNIEQDDFTSSDDEDVPEAVP-A 120

Query: 121 SAPNGKPSPKGVKPGLVESN---DAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDES- 180
            AP    +       +V+++    AK A +K   +  + D+ED  DDE + +ED D E  
Sbjct: 121 PAPTAVTANGNAGAAVVKADTKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDDSEKG 180

Query: 181 -DEEMLDGDNSDEEDDDSESDEETPKKVESA-KKRLNESATKTTPVPAKKAKLA-----T 240
            D +  D D+ +EED + E +EETPKK E   KKR NES +K TPV  KKAK A     T
Sbjct: 181 MDVDEDDSDDDEEEDSEDEEEEETPKKPEPINKKRPNESVSK-TPVSGKKAKPAAAPAST 240

Query: 241 PEKT-DSKKGGHTATPHPAKKTGKTPAAKLETPKSGGQFS 269
           P+KT + KKGGHTATPHPAKK GK+P    ++PKSGGQ S
Sbjct: 241 PQKTEEKKKGGHTATPHPAKKGGKSPVNANQSPKSGGQSS 274

The following BLAST results are available for this feature:

BLAST of CsGy6G012290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LJS2	5.2e-58	53.31	Histone deacetylase HDT1 OS=Glycine max OX=3847 GN=HDT1 PE=2 SV=1	[more]
Q6V9I6	2.0e-57	49.83	Histone deacetylase HDT1 OS=Solanum chacoense OX=4108 GN=HDT1 PE=2 SV=1	[more]
Q9M4U5	4.9e-48	48.72	Histone deacetylase HDT2 OS=Zea mays OX=4577 GN=HDT2 PE=1 SV=1	[more]
Q9M4U4	2.7e-46	47.57	Histone deacetylase HDT3 OS=Zea mays OX=4577 GN=HDT3 PE=2 SV=1	[more]
O24591	4.6e-46	47.23	Histone deacetylase HDT1 OS=Zea mays OX=4577 GN=HDT1 PE=1 SV=1	[more]

BLAST of CsGy6G012290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145780.1	2.26e-192	100.00	histone deacetylase HDT1 isoform X2 [Cucumis sativus]	[more]
XP_011657054.1	9.14e-190	99.32	histone deacetylase HDT1 isoform X1 [Cucumis sativus]	[more]
XP_008458629.1	2.22e-172	91.86	PREDICTED: histone deacetylase HDT1-like [Cucumis melo]	[more]
KAE8646904.1	3.87e-170	92.83	hypothetical protein Csa_020859 [Cucumis sativus]	[more]
XP_023513047.1	1.00e-146	81.00	histone deacetylase HDT1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy6G012290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KB05	1.16e-174	92.72	Histone deacetylase 2a OS=Cucumis sativus OX=3659 GN=Csa_6G150540 PE=3 SV=1	[more]
A0A1S3C9I8	1.07e-172	91.86	histone deacetylase HDT1-like OS=Cucumis melo OX=3656 GN=LOC103497976 PE=3 SV=1	[more]
A0A6J1FU30	6.89e-147	81.00	histone deacetylase HDT1-like OS=Cucurbita moschata OX=3662 GN=LOC111448146 PE=3...	[more]
A0A6J1JAV1	1.32e-144	80.00	histone deacetylase HDT1-like OS=Cucurbita maxima OX=3661 GN=LOC111484116 PE=3 S...	[more]
A0A6J1H225	1.85e-134	77.26	histone deacetylase HDT1-like OS=Cucurbita moschata OX=3662 GN=LOC111459657 PE=3...	[more]

BLAST of CsGy6G012290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03740.1	1.0e-45	42.12	histone deacetylase 2C	[more]
AT3G44750.1	5.9e-41	45.70	histone deacetylase 3	[more]
AT3G44750.2	7.7e-41	46.05	histone deacetylase 3	[more]
AT5G22650.2	1.0e-40	45.52	histone deacetylase 2B	[more]
AT5G22650.1	2.5e-39	45.36	histone deacetylase 2B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.120.340	Nucleoplasmin core domain	coord: 1..100 e-value: 6.9E-15 score: 57.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..197
None	No IPR available	PANTHER	PTHR31802:SF12	HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1	coord: 1..289
None	No IPR available	PANTHER	PTHR31802	32 KDA HEAT SHOCK PROTEIN-RELATED	coord: 1..289
IPR041232	Nucleoplasmin-like domain	PFAM	PF17800	NPL	coord: 3..93 e-value: 5.1E-11 score: 43.2
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 269..290
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 267..293 score: 11.489214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G012290.2	CsGy6G012290.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005730	nucleolus