CsGy6G012120 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G012120
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	lysosomal Pro-X carboxypeptidase-like
Location	Gy14Chr6: 10535096 .. 10538854 (+)
RNA-Seq Expression	CsGy6G012120
Synteny	CsGy6G012120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTGAGTAGGTACAAAAATAGTCCATAATCTTATTTACTTAATGTAACTATTTTCAAAATGTGGAATAGAGATTTGAATTACATATTTGATCCGAGTTGATTTGTGCTTATTTTGAGTCTTAAGTTTCTTAAAACCTGGGATTAAACTGTATCTTATGTTAAAAGGGTAGCCTAAATTTCATTTTTCCAAAACAAAGATTACGAAAACCGGTGTGATTTTAAATACAAGTTCGCGCGCTAGCCCTAGCCGCATCCCCGCTATTTTCCCCCATCTCTCTCAATTCTTCTTTGTCGCTCAACTATTTGCGATTCTTTCTCCTTAATTTCCAGGTTACTGAAGGATTCGAAGCGGTTTGCCATCACTTTTTGGGCATTTTTAAGCTGCCATTCCATGGGTACATTCTCTCTACTTTTGAGCTTGTTTTTTAGTATTTTGGTTATTTTGGAGTAGAATAAATCTGGGTAGGAATGTTTTTTTGTGGATTTTTGTGTTAGACATTTCGAATTTGAATTGTGAGGTAGATTGGCGTGACATTTCTTGAGTTCATATGCGATTTGGGGCTGTTTCCTTTGTTTTTTGGGTTGTGCTTGTATGATGAGTTCCAAAACTAAAAGAGCTCGATCCGCACTTTCCTCGGAAGGGGCTTTCAATCGCCATAAATTTATTAGTAAGGATGCTGCCGATCGGTATAGGAAACTTGTTGTTAAGAGTAGTGTTATACCGGAAAGGGGATTGGCTCCGTGCGAAGTTCATCAACCCCAACTATTTCAGAATATTATGCAACGGGGTTGGTCTGATTTTGTGAAACAGCCTGAGCCGGCAGTGCTTTCCATTGTTCGTGAATTTTATGCTAATATGGTTGAGGGCAGTTCTCGATCGTTTGTACGTGGTCGTCAGGTTTCCTTCGACTATGGCACAATCAATCGGTACTATCACTTACCTAACTTTGAGCGTGATGAATATGATATCTACGCTAGTGAACATGTGGATGTTCACCAGATCATTCGTGAGCTCTGCCAACCTGGAGCTGAATGGGTTATTAATCCAGGCGAGCCAATTAGATTTAAATCTTCAAACTTGACTGTTTCTAACCAAGTGTGGCACAAATTTATCTGTGCTAAGTTACTTCCTGTGGCTCATACGAGTAGTGTCACGAAAGAGAGGGCGATTCTTCTTTACGCTATTGCCACTAAGAGGTCTGTGGATGTTGGTAAAGTCATTCAGAAGTCCTTATGCAACATCCGTAAGAGTGGCATGACTGGAGGACTTGGTCATTCATCTCTAATTACAGCCTTGTGTAGGAATGAAGGCGTCGTGTGGAACGAAAAGGAGGAGTTGGTTGACCCTAAGCCCATCATGGATAAGAGTTTTATTATGGAAATTCCTGGTTGGAGTTTTGAGCCCATGGGTGCAGGCCACTGTGATGAGACTGCTGGCACAAGCCACTGCAATAAGACGACCGATGCAGGCCACAATGATGAGCCAAGTGACCAGGATGAGGCAGAACCCATTCGAGAGGTACGGCAAACCCTGACCATAGATCTTCCTAGGCAGACACAAAGGCCTCTATCCCTTGACGAGCAAATTCGACGATTGGAACGTCGTGTTCGCAGCTACCATAGACGCTCAGAGGAAAGATTCGATCATCTCTACAAGTGTTTGTTTGCTCTGCATGATCGTGGAGTCATGCATGTGTTTCCCCCTCGCATGCAACCATATGTATCTTCAGATGATGATTCCTGAGACTTCATTTCTTACGGAGCAGTGTTGTTTACCCCTAGTCATGTTGTTTGTACTCTTTATTTTGTAATTACTTTGATCTATTCTTACTCCATTAAAGGTAGTGTAAAGTTTGAGGAGTGGTTAGCTCTATTGTGCATGCAATTTAGTTATCACTAATACAGATTCGTTGAATGCAATTTTTGATATCTTGGGTTTTTTGATATTGATGCTGCATTATTTTTCTGATTATGACAGAATTTATTATTGATTCAGGTTGGATTTAAATTTTTCCTTGGACTCCCTTGCCATATTGTGGATGGTCTTGCCTACTTTTGGTTTAGAAAGCTTAGAACTGGGTTATATAGTCCAACTTTTGTTATGACTTTGAAATGATTTAGAAACTGATTAGAAGGTTAATTGAAATGATAGTGATGTTACACTTCAGAGAAGTTGCTTTATTAATTCTCTATATCTCTTTGTGTTGTGCGAGTGAGGTGTCATATAGATAATTCTATGTATCTCCATAGTCAGTGAGGTATGTGTTGTTTCTCTCCTCTCGTCTCTTTGTTTCTATCAATCATTTGCAAAACAGAAGTTGGAAAGATCAATTTTGTTAAAGTACATCAAGAGAGTCTGTAACTTTCCTCTGCCAACATATTTTCATTTCAGCCATTATATATGACCTACTTTTTCTCACTAATATACCTTACTTTTGATTTTCATTAGAAAAACATTAATATACTTTTGATTTTCATTAGAAAAACATTAATATACTTTGATTTAAAAAGAATGATTGATGCAATTTTGACTCAATTATATTAGTTTCTATGTTTCATTTAATATCTTGATGATTTTTGTTTGAAATATTTAAACATATGCAACTAAGGTGAACATGATAGATCGAAAAACTGAGTTTACTGAACCTAAAGTGATCAGTTGGAGATAAGGAGAGGTTCGGTTGATGTTAGTTAAAAAATTCCAAACTGAAACATTTTTAAAAAAATTCAAAGATTTAAAATGGTCAATTTGTACTTCTTCATGGTAGAAGTTGATTTGATAAAAAAACTAACTCCGACTTATTGAAGTAGATGAAATTGAGTGAGGAGATTATAGAAATTCAAGCTCAAGTTTGAGGGAGTGGCGAGGAGATTATAGAAATTCAAGCTCAAGTTTGAGGGAGTGGCATTGTGACGGCATACGCAAAACCAAGCAGCCCTGGTAGGTAACACTGTAACGTAACACTTAGGGTATGTTTGGCCATGGAGTATGTGCATCATACAGTCTATTGCAATGGCAATGATTGATGATGCTTTGAATGTCAAAAGGGTACGGTGGAAACGTATCATCTCTATGTTTTGAAAGCTTTTTATTGCCATTTATCATCTCTAGGTCCAAATGGTATGGAGGAACACCATACAATCCACAATCCAGATATATAGCTTGTGTCCTGGAGGATTTTCATTTATCAGAATGACATTACTTTTTAGTTTGTTTGACACCATAAAGAAAAAAAAATCTAAAAGGAAATTAATGGTCGAGTTTTTTACTCTCACTGATACATTGATTTCTGTAGGATCTCATTGCTTGGACATCTTAAAGGCACATGAAACTGATCCTGAATGGTTAGTGACACAGAGAAAGACTGAGGTTGGCATCGTAAAGGTTGGATCAGCAAGTATTATGCAGATTTGGAAAAGTACAAACAATAGAAATCACACTCAAAGGTGATTGAAGACATTCTTTTCTCCATTACAGTGTCTATACAAAAGGAAATAAAAAGCATTGTGAACTTGCAATATGAGCTATCGTTAGAGAATTTGAATTTGTAACCACCCATGGTAGAATGAGAAATAATAGATCCTCTTCTTGTATCTTATACCCACACCGAAAGTTTCAATTAATAAAGTCGACGCTTTCGTACTACTACTGTTATGCCTTTTCATTTTCTTTAAACGTCTGATGACACTATTCTAGTGATGATTGAACTTTAAGGAATTCAATCTTTACTAAAGAATGAAACTTCGCAGGTAA

mRNA sequence

ATGGATTTGAGTAGGTTACTGAAGGATTCGAAGCGGTTTGCCATCACTTTTTGGGCATTTTTAAGCTGCCATTCCATGGGATCTCATTGCTTGGACATCTTAAAGGCACATGAAACTGATCCTGAATGGTTAGTGACACAGAGAAAGACTGAGGTTGGCATCGTAAAGGTTGGATCAGCAAGTATTATGCAGATTTGGAAAAGTACAAACAATAGAAATCACACTCAAAGGTAA

Coding sequence (CDS)

ATGGATTTGAGTAGGTTACTGAAGGATTCGAAGCGGTTTGCCATCACTTTTTGGGCATTTTTAAGCTGCCATTCCATGGGATCTCATTGCTTGGACATCTTAAAGGCACATGAAACTGATCCTGAATGGTTAGTGACACAGAGAAAGACTGAGGTTGGCATCGTAAAGGTTGGATCAGCAAGTATTATGCAGATTTGGAAAAGTACAAACAATAGAAATCACACTCAAAGGTAA

Protein sequence

MDLSRLLKDSKRFAITFWAFLSCHSMGSHCLDILKAHETDPEWLVTQRKTEVGIVKVGSASIMQIWKSTNNRNHTQR*

Homology

[Close]

BLAST of CsGy6G012120 vs. NCBI nr
Match: XP_008458666.1 (PREDICTED: lysosomal Pro-X carboxypeptidase-like isoform X2 [Cucumis melo])

HSP 1 Score: 67.4 bits (163), Expect = 6.75e-11
Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 19  AFLSCHSM-GSHCLDILKAHETDPEWLVTQRKTEVGIVK 56
           + L+ H+  GSHCLDILKAHETDPEWLVTQRKTEVGI+K
Sbjct: 312 SLLAVHTTNGSHCLDILKAHETDPEWLVTQRKTEVGIIK 350

[Close]

BLAST of CsGy6G012120 vs. NCBI nr
Match: XP_008458665.2 (PREDICTED: lysosomal Pro-X carboxypeptidase-like isoform X1 [Cucumis melo] >KAA0033354.1 lysosomal Pro-X carboxypeptidase-like isoform X1 [Cucumis melo var. makuwa] >TYJ96638.1 lysosomal Pro-X carboxypeptidase-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 67.4 bits (163), Expect = 7.60e-11
Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 19  AFLSCHSM-GSHCLDILKAHETDPEWLVTQRKTEVGIVK 56
           + L+ H+  GSHCLDILKAHETDPEWLVTQRKTEVGI+K
Sbjct: 444 SLLAVHTTNGSHCLDILKAHETDPEWLVTQRKTEVGIIK 482

[Close]

BLAST of CsGy6G012120 vs. NCBI nr
Match: KGN46909.2 (hypothetical protein Csa_021082 [Cucumis sativus])

HSP 1 Score: 64.7 bits (156), Expect = 6.36e-10
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 0


Query: 27  GSHCLDILKAHETDPEWLVTQRKTEVGIVK 56
           GSHCLDILKAHETDPEWLV QRKTEVGI+K
Sbjct: 336 GSHCLDILKAHETDPEWLVRQRKTEVGIIK 365

[Close]

BLAST of CsGy6G012120 vs. NCBI nr
Match: XP_011657047.2 (lysosomal Pro-X carboxypeptidase [Cucumis sativus])

HSP 1 Score: 64.7 bits (156), Expect = 6.76e-10
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 0


Query: 27  GSHCLDILKAHETDPEWLVTQRKTEVGIVK 56
           GSHCLDILKAHETDPEWLV QRKTEVGI+K
Sbjct: 453 GSHCLDILKAHETDPEWLVRQRKTEVGIIK 482

[Close]

BLAST of CsGy6G012120 vs. NCBI nr
Match: KAF3957969.1 (hypothetical protein CMV_017070 [Castanea mollissima])

HSP 1 Score: 62.8 bits (151), Expect = 1.32e-09
Identity = 32/60 (53.33%), Postives = 41/60 (68.33%), Query Frame = 0


Query: 19  AFLSCHSM-GSHCLDILKAHETDPEWLVTQRKTEVGIVKVGSASIMQIWKSTNNRNHTQR 77
           A ++ H++ GSHCLDIL A +TDPEWLV QRK EV I+  GS S M I+  T N   +Q+
Sbjct: 163 AIVAVHTVNGSHCLDILFAKDTDPEWLVMQRKVEVRIINDGSLSTMLIFSPTRNELKSQQ 222

[Close]

BLAST of CsGy6G012120 vs. ExPASy TrEMBL
Match: A0A1S3C9M3 (lysosomal Pro-X carboxypeptidase-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497995 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.27e-11
Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 19  AFLSCHSM-GSHCLDILKAHETDPEWLVTQRKTEVGIVK 56
           + L+ H+  GSHCLDILKAHETDPEWLVTQRKTEVGI+K
Sbjct: 312 SLLAVHTTNGSHCLDILKAHETDPEWLVTQRKTEVGIIK 350

[Close]

BLAST of CsGy6G012120 vs. ExPASy TrEMBL
Match: A0A5A7SQ78 (Lysosomal Pro-X carboxypeptidase-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26G00030 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.68e-11
Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 19  AFLSCHSM-GSHCLDILKAHETDPEWLVTQRKTEVGIVK 56
           + L+ H+  GSHCLDILKAHETDPEWLVTQRKTEVGI+K
Sbjct: 444 SLLAVHTTNGSHCLDILKAHETDPEWLVTQRKTEVGIIK 482

[Close]

BLAST of CsGy6G012120 vs. ExPASy TrEMBL
Match: A0A1S3C8Z1 (lysosomal Pro-X carboxypeptidase-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497995 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.68e-11
Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 19  AFLSCHSM-GSHCLDILKAHETDPEWLVTQRKTEVGIVK 56
           + L+ H+  GSHCLDILKAHETDPEWLVTQRKTEVGI+K
Sbjct: 444 SLLAVHTTNGSHCLDILKAHETDPEWLVTQRKTEVGIIK 482

[Close]

BLAST of CsGy6G012120 vs. ExPASy TrEMBL
Match: A0A0A0KBK9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149390 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 3.28e-10
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 0


Query: 27  GSHCLDILKAHETDPEWLVTQRKTEVGIVK 56
           GSHCLDILKAHETDPEWLV QRKTEVGI+K
Sbjct: 467 GSHCLDILKAHETDPEWLVRQRKTEVGIIK 496

[Close]

BLAST of CsGy6G012120 vs. ExPASy TrEMBL
Match: A0A6J1JFP3 (lysosomal Pro-X carboxypeptidase-like OS=Cucurbita maxima OX=3661 GN=LOC111484085 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.14e-09
Identity = 27/30 (90.00%), Postives = 30/30 (100.00%), Query Frame = 0


Query: 27  GSHCLDILKAHETDPEWLVTQRKTEVGIVK 56
           GSHCLDILKA+ETDPEW+VTQRKTEVGI+K
Sbjct: 448 GSHCLDILKANETDPEWVVTQRKTEVGIIK 477

[Close]

BLAST of CsGy6G012120 vs. TAIR 10
Match: AT5G22860.1 (Serine carboxypeptidase S28 family protein )

HSP 1 Score: 42.4 bits (98), Expect = 2.0e-04
Identity = 16/29 (55.17%), Postives = 21/29 (72.41%), Query Frame = 0


Query: 27  GSHCLDILKAHETDPEWLVTQRKTEVGIV 56
           GSHCLDI    + DPEWLV QR+ E+ ++
Sbjct: 456 GSHCLDITLKSKEDPEWLVIQREKEIKVI 484

The following BLAST results are available for this feature:

BLAST of CsGy6G012120 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G012120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458666.1	6.75e-11	79.49	PREDICTED: lysosomal Pro-X carboxypeptidase-like isoform X2 [Cucumis melo]	[more]
XP_008458665.2	7.60e-11	79.49	PREDICTED: lysosomal Pro-X carboxypeptidase-like isoform X1 [Cucumis melo] >KAA0...	[more]
KGN46909.2	6.36e-10	93.33	hypothetical protein Csa_021082 [Cucumis sativus]	[more]
XP_011657047.2	6.76e-10	93.33	lysosomal Pro-X carboxypeptidase [Cucumis sativus]	[more]
KAF3957969.1	1.32e-09	53.33	hypothetical protein CMV_017070 [Castanea mollissima]	[more]

BLAST of CsGy6G012120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C9M3	3.27e-11	79.49	lysosomal Pro-X carboxypeptidase-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A5A7SQ78	3.68e-11	79.49	Lysosomal Pro-X carboxypeptidase-like isoform X1 OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3C8Z1	3.68e-11	79.49	lysosomal Pro-X carboxypeptidase-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0KBK9	3.28e-10	93.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149390 PE=3 SV=1	[more]
A0A6J1JFP3	1.14e-09	90.00	lysosomal Pro-X carboxypeptidase-like OS=Cucurbita maxima OX=3661 GN=LOC11148408...	[more]

BLAST of CsGy6G012120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22860.1	2.0e-04	55.17	Serine carboxypeptidase S28 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..23 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G012120.2	CsGy6G012120.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004180	carboxypeptidase activity
molecular_function	GO:0008236	serine-type peptidase activity