CsGy6G011855 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G011855
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr6: 10347098 .. 10347451 (+)
RNA-Seq Expression	CsGy6G011855
Synteny	CsGy6G011855

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAATAACCTTTACCTTATGATCATGGCTTCTCTTTTCCCATATTTCTTCATTTATCTCCTCTTCCTCCTTCTTCTATCTTCTCCTACTCAATCTATGTGTGCTCGTTGTGTCCCTCCAAGCGCCCCTAGCACCATCGTTAGACCGCTTGCCACGCCCGACAATGCTGAAGCCTACGAGACTGTGAAGCCTCAACTTATTAACCGAAAGAGGCTGGTTTTTGGTGGCAATGAAGTCAAGAGCTGCCTCCCTAAAGGCTTTCGACGATCCTCTGCCCCTAGTCGATTTGTTAATTACCATACTTCTGGTGGTTGTTCTCCGACCACTGATCATTCTATTAACACCAACCCTTGAG

mRNA sequence

ACAATAACCTTTACCTTATGATCATGGCTTCTCTTTTCCCATATTTCTTCATTTATCTCCTCTTCCTCCTTCTTCTATCTTCTCCTACTCAATCTATGTGTGCTCGTTGTGTCCCTCCAAGCGCCCCTAGCACCATCGTTAGACCGCTTGCCACGCCCGACAATGCTGAAGCCTACGAGACTGTGAAGCCTCAACTTATTAACCGAAAGAGGCTGGTTTTTGGTGGCAATGAAGTCAAGAGCTGCCTCCCTAAAGGCTTTCGACGATCCTCTGCCCCTAGTCGATTTGTTAATTACCATACTTCTGGTGGTTGTTCTCCGACCACTGATCATTCTATTAACACCAACCCTTGAG

Coding sequence (CDS)

ATGATCATGGCTTCTCTTTTCCCATATTTCTTCATTTATCTCCTCTTCCTCCTTCTTCTATCTTCTCCTACTCAATCTATGTGTGCTCGTTGTGTCCCTCCAAGCGCCCCTAGCACCATCGTTAGACCGCTTGCCACGCCCGACAATGCTGAAGCCTACGAGACTGTGAAGCCTCAACTTATTAACCGAAAGAGGCTGGTTTTTGGTGGCAATGAAGTCAAGAGCTGCCTCCCTAAAGGCTTTCGACGATCCTCTGCCCCTAGTCGATTTGTTAATTACCATACTTCTGGTGGTTGTTCTCCGACCACTGATCATTCTATTAACACCAACCCTTGA

Protein sequence

MIMASLFPYFFIYLLFLLLLSSPTQSMCARCVPPSAPSTIVRPLATPDNAEAYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINTNP*

Homology

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BLAST of CsGy6G011855 vs. NCBI nr
Match: KAE8646888.1 (hypothetical protein Csa_020968, partial [Cucumis sativus])

HSP 1 Score: 213 bits (541), Expect = 2.81e-69
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MIMASLFPYFFIYLLFLLLLSSPTQSMCARCVPPSAPSTIVRPLATPDNAEAYETVKPQL 60
           MIMASLFPYFFIYLLFLLLLSSPTQSMCARCVPPSAPSTIVRPLATPDNAEAYETVKPQL
Sbjct: 1   MIMASLFPYFFIYLLFLLLLSSPTQSMCARCVPPSAPSTIVRPLATPDNAEAYETVKPQL 60

Query: 61  INRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHS 106
           INRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHS
Sbjct: 61  INRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHS 106

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BLAST of CsGy6G011855 vs. NCBI nr
Match: KAG6570806.1 (hypothetical protein SDJN03_29721, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 177 bits (448), Expect = 3.91e-55
Identity = 95/107 (88.79%), Postives = 98/107 (91.59%), Query Frame = 0


Query: 3   MASLFPYFFIYLLFLLLLSSPTQSMCARCVPPSAPSTIVRPLATPDNAEAYETVKPQLIN 62
           MASLFP+ F YLLFLLLLSSP+ SM ARCVPPSAPSTIV PLATP+ AE YETVKPQL N
Sbjct: 1   MASLFPFLF-YLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPE-AEDYETVKPQL-N 60

Query: 63  RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINT 109
           RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCS TTDHSINT
Sbjct: 61  RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTDHSINT 104

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BLAST of CsGy6G011855 vs. NCBI nr
Match: KAA0035234.1 (hypothetical protein E6C27_scaffold228G00110 [Cucumis melo var. makuwa] >TYK22389.1 hypothetical protein E5676_scaffold173G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 173 bits (438), Expect = 7.29e-54
Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 0


Query: 27  MCARCVPPSAPSTIVRPLA-TPDNAEAYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS 86
           MCARCVPPSAPSTIVRPLA TPDNAE YETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS
Sbjct: 1   MCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS 60

Query: 87  APSRFVNYHTSGGCSPTTDHSINTNP 111
           APSRFVNYHTSGGCSPTTDHSINTNP
Sbjct: 61  APSRFVNYHTSGGCSPTTDHSINTNP 86

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BLAST of CsGy6G011855 vs. NCBI nr
Match: KAF3961747.1 (hypothetical protein CMV_013666 [Castanea mollissima])

HSP 1 Score: 97.4 bits (241), Expect = 1.20e-23
Identity = 56/90 (62.22%), Postives = 63/90 (70.00%), Query Frame = 0


Query: 9  YFFIYLLFLLLLSSPTQSMCARCVPPSAPSTIVRPLATPDNAEAYETVKPQLINRKRLVF 68
          Y+ + L  LLLLSS   +M AR +P SAPSTIVRPL +   A+ Y T+KP L   K  VF
Sbjct: 6  YYTLVLCLLLLLSSIDTNMAARKIPSSAPSTIVRPLVS--EAQDYVTMKP-LFKHKHRVF 65

Query: 69 GGNEVKSCLPKGFRRSSAPSRFVNYHTSGG 98
           G EVKSCLPKGFR SSAPSRFVNYH  GG
Sbjct: 66 RGKEVKSCLPKGFRHSSAPSRFVNYHALGG 92

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BLAST of CsGy6G011855 vs. NCBI nr
Match: PQQ20695.1 (hypothetical protein Pyn_14613 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 93.6 bits (231), Expect = 4.07e-22
Identity = 47/76 (61.84%), Postives = 58/76 (76.32%), Query Frame = 0


Query: 26  SMCARCVPPSAPSTIVRPLATPDNAEAYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS 85
           S+ AR +P SAPST+VRPL T +  + Y ++KPQ +N K+ VF G EVK CLPKGFR +S
Sbjct: 23  SLAARNIPSSAPSTMVRPLVT-EGLDHYASMKPQDLNHKQQVFHGTEVKDCLPKGFRHAS 82

Query: 86  APSRFVNYHTSG-GCS 100
           APSR+VNYHT G GCS
Sbjct: 83  APSRYVNYHTLGQGCS 97

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BLAST of CsGy6G011855 vs. ExPASy TrEMBL
Match: A0A0A0KDD3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147570 PE=4 SV=1)

HSP 1 Score: 221 bits (562), Expect = 8.80e-73
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 3   MASLFPYFFIYLLFLLLLSSPTQSMCARCVPPSAPSTIVRPLATPDNAEAYETVKPQLIN 62
           MASLFPYFFIYLLFLLLLSSPTQSMCARCVPPSAPSTIVRPLATPDNAEAYETVKPQLIN
Sbjct: 1   MASLFPYFFIYLLFLLLLSSPTQSMCARCVPPSAPSTIVRPLATPDNAEAYETVKPQLIN 60

Query: 63  RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINTNP 111
           RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINTNP
Sbjct: 61  RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINTNP 109

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BLAST of CsGy6G011855 vs. ExPASy TrEMBL
Match: A0A5D3DGK4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00130 PE=4 SV=1)

HSP 1 Score: 173 bits (438), Expect = 3.53e-54
Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 0


Query: 27  MCARCVPPSAPSTIVRPLA-TPDNAEAYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS 86
           MCARCVPPSAPSTIVRPLA TPDNAE YETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS
Sbjct: 1   MCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS 60

Query: 87  APSRFVNYHTSGGCSPTTDHSINTNP 111
           APSRFVNYHTSGGCSPTTDHSINTNP
Sbjct: 61  APSRFVNYHTSGGCSPTTDHSINTNP 86

[Close]

BLAST of CsGy6G011855 vs. ExPASy TrEMBL
Match: A0A314ZL66 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_14613 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.97e-22
Identity = 47/76 (61.84%), Postives = 58/76 (76.32%), Query Frame = 0


Query: 26  SMCARCVPPSAPSTIVRPLATPDNAEAYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS 85
           S+ AR +P SAPST+VRPL T +  + Y ++KPQ +N K+ VF G EVK CLPKGFR +S
Sbjct: 23  SLAARNIPSSAPSTMVRPLVT-EGLDHYASMKPQDLNHKQQVFHGTEVKDCLPKGFRHAS 82

Query: 86  APSRFVNYHTSG-GCS 100
           APSR+VNYHT G GCS
Sbjct: 83  APSRYVNYHTLGQGCS 97

[Close]

BLAST of CsGy6G011855 vs. ExPASy TrEMBL
Match: A0A314YWA3 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_04778 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.79e-22
Identity = 47/76 (61.84%), Postives = 58/76 (76.32%), Query Frame = 0


Query: 26  SMCARCVPPSAPSTIVRPLATPDNAEAYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS 85
           S+ AR +P SAPST+VRPL T +  + Y ++KPQ +N K+ VF G EVK CLPKGFR +S
Sbjct: 23  SLAARNIPSSAPSTMVRPLVT-EGLDHYVSMKPQDLNHKQQVFHGTEVKDCLPKGFRHAS 82

Query: 86  APSRFVNYHTSG-GCS 100
           APSR+VNYHT G GCS
Sbjct: 83  APSRYVNYHTLGQGCS 97

[Close]

BLAST of CsGy6G011855 vs. ExPASy TrEMBL
Match: A0A2P5CZN8 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_109280 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.61e-22
Identity = 52/97 (53.61%), Postives = 63/97 (64.95%), Query Frame = 0


Query: 5   SLFPYFFIYLLFLLLLSSPTQSMCARCVPPSAPSTIVRPLATPDNAEAYETVKPQLINRK 64
           SL+    +Y + LLLLSS   SM  R +P SAPST+VRPL T D  + Y +++P L   +
Sbjct: 27  SLYVMILLYSIILLLLSSFDVSMAGRAIPSSAPSTVVRPLVT-DADQDYVSLRPHLNPGQ 86

Query: 65  RLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSP 101
             VF G E K CLPKGFR +SAPSRFVNYH  G  SP
Sbjct: 87  NQVFRGREFKGCLPKGFRHASAPSRFVNYHPLGALSP 122

The following BLAST results are available for this feature:

BLAST of CsGy6G011855 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G011855 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646888.1	2.81e-69	100.00	hypothetical protein Csa_020968, partial [Cucumis sativus]	[more]
KAG6570806.1	3.91e-55	88.79	hypothetical protein SDJN03_29721, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0035234.1	7.29e-54	97.67	hypothetical protein E6C27_scaffold228G00110 [Cucumis melo var. makuwa] >TYK2238...	[more]
KAF3961747.1	1.20e-23	62.22	hypothetical protein CMV_013666 [Castanea mollissima]	[more]
PQQ20695.1	4.07e-22	61.84	hypothetical protein Pyn_14613 [Prunus yedoensis var. nudiflora]	[more]

BLAST of CsGy6G011855 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDD3	8.80e-73	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147570 PE=4 SV=1	[more]
A0A5D3DGK4	3.53e-54	97.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A314ZL66	1.97e-22	61.84	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_146...	[more]
A0A314YWA3	2.79e-22	61.84	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_047...	[more]
A0A2P5CZN8	4.61e-22	53.61	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]

BLAST of CsGy6G011855 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36619	OS04G0208900 PROTEIN	coord: 3..104
None	No IPR available	PANTHER	PTHR36619:SF2	OS04G0208900 PROTEIN	coord: 3..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G011855.1	CsGy6G011855.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane