CsGy6G009470 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G009470
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionMetal ion binding protein, putative
LocationGy14Chr6: 7939949 .. 7940944 (+)
RNA-Seq ExpressionCsGy6G009470
SyntenyCsGy6G009470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACCCCTGTTTTCTCATTAACTCACACCTAAATACTTTCCTCTCTCTCTTCCTCTCTGTCTCTAAGTTTGTACGGACACTCCATTCTTTCTCATCAGTTTCAACAAAAATGAAGGTAGCTGCGTTGTTAAATACTATTTTAATCTATGAGTTTCTTTGTTTTCTTATCGGGAGTTTTTAAAATCTAAGTCAGAATTATCATAAGAAGAAGAAATGTTTTGCTCTTAAGATTTTGATCACACGTGATTTTTGAAATGGCACCAGCAAGAAACAAAAAAATAAAATAGACTACTTTTAACTTAGATCGTGTCTTTGCAGCAAAAGATAGTGATTCAAGTGTCCATGAAAAGGGGGCCCAAGTACCGCAGCAAAGCCTTGAAGATTGCAGCATCTGTCAAAGGTAATTAAAAACTATTGCATATATATATATATATTTATAACATAACTATAATCTATATTGATATAACTAATTAGTTTACAATGGAAATTACAGGGAGCATTGAGACAATTAGCTTGGTAGGAGACCATAAAGATAAAGTGGAGGTAGTTGGAGATTTAGATCCCATAGAACTCACTGAATTGCTAAGGAAGGGTTTCGGTTCCGCACAGTTGGAGTCAGTGAGCGCAGTTGAAGATAAAGAGAAAAAGAAAGATAAAGACGATGGCATAACATGGACATGCTCGTGGGGAGTGCCTCATCATTCATCTTATTGCTATTGCTACAACCTTCGCCCCTACCCTTCCCATTCCATATGGTGATTTATGCTTCCCACCACCAAAACTATTGATAATATATTTATAATTATAACAAAATTTTAGAATATATCAAGAATAGATACTCGTTGAAGTGTCTGTACGTGTAGCATATCGATTTTTCTAGTAAATTTTATTAAGTTGAAAAGTATCTTATTAAGTTATCGAGTTTCACTTCTATTTAATTTGTATATAGATACTACAAATTGGAATAAGATTTTAATGCATCTACCTCAAATTGCTG

mRNA sequence

AACCCCTGTTTTCTCATTAACTCACACCTAAATACTTTCCTCTCTCTCTTCCTCTCTGTCTCTAAGTTTGTACGGACACTCCATTCTTTCTCATCAGTTTCAACAAAAATGAAGCAAAAGATAGTGATTCAAGTGTCCATGAAAAGGGGGCCCAAGTACCGCAGCAAAGCCTTGAAGATTGCAGCATCTGTCAAAGGGAGCATTGAGACAATTAGCTTGGTAGGAGACCATAAAGATAAAGTGGAGGTAGTTGGAGATTTAGATCCCATAGAACTCACTGAATTGCTAAGGAAGGGTTTCGGTTCCGCACAGTTGGAGTCAGTGAGCGCAGTTGAAGATAAAGAGAAAAAGAAAGATAAAGACGATGGCATAACATGGACATGCTCGTGGGGAGTGCCTCATCATTCATCTTATTGCTATTGCTACAACCTTCGCCCCTACCCTTCCCATTCCATATGGTGATTTATGCTTCCCACCACCAAAACTATTGATAATATATTTATAATTATAACAAAATTTTAGAATATATCAAGAATAGATACTCGTTGAAGTGTCTGTACGTGTAGCATATCGATTTTTCTAGTAAATTTTATTAAGTTGAAAAGTATCTTATTAAGTTATCGAGTTTCACTTCTATTTAATTTGTATATAGATACTACAAATTGGAATAAGATTTTAATGCATCTACCTCAAATTGCTG

Coding sequence (CDS)

ATGAAGCAAAAGATAGTGATTCAAGTGTCCATGAAAAGGGGGCCCAAGTACCGCAGCAAAGCCTTGAAGATTGCAGCATCTGTCAAAGGGAGCATTGAGACAATTAGCTTGGTAGGAGACCATAAAGATAAAGTGGAGGTAGTTGGAGATTTAGATCCCATAGAACTCACTGAATTGCTAAGGAAGGGTTTCGGTTCCGCACAGTTGGAGTCAGTGAGCGCAGTTGAAGATAAAGAGAAAAAGAAAGATAAAGACGATGGCATAACATGGACATGCTCGTGGGGAGTGCCTCATCATTCATCTTATTGCTATTGCTACAACCTTCGCCCCTACCCTTCCCATTCCATATGGTGA

Protein sequence

MKQKIVIQVSMKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELLRKGFGSAQLESVSAVEDKEKKKDKDDGITWTCSWGVPHHSSYCYCYNLRPYPSHSIW*
Homology
[Close]
BLAST of CsGy6G009470 vs. NCBI nr
Match: XP_004140067.1 (uncharacterized protein LOC101216311 [Cucumis sativus] >KGN46623.1 hypothetical protein Csa_005620 [Cucumis sativus])

HSP 1 Score: 242 bits (617), Expect = 1.23e-80
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 

Query: 1   MKQKIVIQVSMKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELL 60
           MKQKIVIQVSMKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELL
Sbjct: 1   MKQKIVIQVSMKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELL 60

Query: 61  RKGFGSAQLESVSAVEDKEKKKDKDDGITWTCSWGVPHHSSYCYCYNLRPYPSHSIW 117
           RKGFGSAQLESVSAVEDKEKKKDKDDGITWTCSWGVPHHSSYCYCYNLRPYPSHSIW
Sbjct: 61  RKGFGSAQLESVSAVEDKEKKKDKDDGITWTCSWGVPHHSSYCYCYNLRPYPSHSIW 117

[Close]
BLAST of CsGy6G009470 vs. NCBI nr
Match: XP_008448137.1 (PREDICTED: uncharacterized protein LOC103490424 [Cucumis melo])

HSP 1 Score: 211 bits (538), Expect = 1.57e-68
Identity = 105/120 (87.50%), Postives = 112/120 (93.33%), Query Frame = 0 

Query: 1   MKQKIVIQVSMKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELL 60
           MKQKIVI+VSMKRGPKYRSKALKIAASVKGSIETISLVGD KDKVEVVGD+DP+ELTELL
Sbjct: 1   MKQKIVIRVSMKRGPKYRSKALKIAASVKGSIETISLVGDDKDKVEVVGDIDPMELTELL 60

Query: 61  RKGFGSAQLESVSAVEDKEKKKDKDD----GITWTCSWGVPHHSSYCYCYNLRPYPSHSI 116
           RKGFGSAQLE+V+AVEDK+K KDKD     GITWTCSWGVPHHSSYCYCYNL PYPS+SI
Sbjct: 61  RKGFGSAQLETVNAVEDKDKDKDKDKNKDGGITWTCSWGVPHHSSYCYCYNLGPYPSYSI 120

[Close]
BLAST of CsGy6G009470 vs. NCBI nr
Match: KAA0060862.1 (putative Heavy metal transport/detoxification superfamily protein [Cucumis melo var. makuwa] >TYK01088.1 putative Heavy metal transport/detoxification superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 197 bits (502), Expect = 3.52e-63
Identity = 97/110 (88.18%), Postives = 102/110 (92.73%), Query Frame = 0 

Query: 11  MKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELLRKGFGSAQLE 70
           MKRGPKYRSKALKIAASVKGSIETISLVGD KDKVEVVGD+DPIELTELLRKGFGSAQLE
Sbjct: 1   MKRGPKYRSKALKIAASVKGSIETISLVGDDKDKVEVVGDIDPIELTELLRKGFGSAQLE 60

Query: 71  SVSAVEDKEKKKDKDD----GITWTCSWGVPHHSSYCYCYNLRPYPSHSI 116
           +V+AVEDK+K KDKD     GITWTCSWGVPHHSSYCYCYNL PYPS+SI
Sbjct: 61  TVNAVEDKDKDKDKDKNKDGGITWTCSWGVPHHSSYCYCYNLGPYPSYSI 110

[Close]
BLAST of CsGy6G009470 vs. NCBI nr
Match: XP_038900437.1 (uncharacterized protein LOC120087662 [Benincasa hispida])

HSP 1 Score: 197 bits (500), Expect = 8.89e-63
Identity = 99/119 (83.19%), Postives = 109/119 (91.60%), Query Frame = 0 

Query: 1   MKQKIVIQVSMKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELL 60
           MKQKIVI+VSMKRGPKYRSKALKIA+SVKG++ETISLVGD KDKVEVVGDLDPIELT+LL
Sbjct: 1   MKQKIVIRVSMKRGPKYRSKALKIASSVKGNVETISLVGDDKDKVEVVGDLDPIELTKLL 60

Query: 61  RKGFGSAQLESVSAVEDKEKKKDKDD--GITWTCSWGVPHHSSYCYCYNLRPYPSHSIW 117
           RK FGSAQLESV+AVE+K+K KDKD   GITWTC+WGVPH SS CYCY L PYPS+SIW
Sbjct: 61  RKSFGSAQLESVNAVEEKDKDKDKDKELGITWTCTWGVPHQSSQCYCY-LGPYPSYSIW 118

[Close]
BLAST of CsGy6G009470 vs. NCBI nr
Match: KAG7010798.1 (Heavy metal-associated isoprenylated plant protein 46, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 182 bits (462), Expect = 7.36e-57
Identity = 94/124 (75.81%), Postives = 104/124 (83.87%), Query Frame = 0 

Query: 1   MKQKIVIQVSMKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELL 60
           MKQKIVI+VSMKRG KYRSKALKIAASV G IETISLVGD KDK+EVVGDLDPIELTE+L
Sbjct: 1   MKQKIVIRVSMKRGAKYRSKALKIAASVSGDIETISLVGDDKDKIEVVGDLDPIELTEML 60

Query: 61  RKGFGSAQLESVSAVE----DKEKKKDKDDG---ITWTCSWGVPHHSSYCYCYNLRPYPS 117
           RK FG AQLESVS VE    D++  KDKD+    ITWTCSWGVPH ++YCYCY+  PYPS
Sbjct: 61  RKRFGCAQLESVSVVEAKKEDEDMNKDKDENEPQITWTCSWGVPHQTAYCYCYHC-PYPS 120

[Close]
BLAST of CsGy6G009470 vs. ExPASy TrEMBL
Match: A0A0A0KAU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G113600 PE=4 SV=1)

HSP 1 Score: 242 bits (617), Expect = 5.94e-81
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 

Query: 1   MKQKIVIQVSMKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELL 60
           MKQKIVIQVSMKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELL
Sbjct: 1   MKQKIVIQVSMKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELL 60

Query: 61  RKGFGSAQLESVSAVEDKEKKKDKDDGITWTCSWGVPHHSSYCYCYNLRPYPSHSIW 117
           RKGFGSAQLESVSAVEDKEKKKDKDDGITWTCSWGVPHHSSYCYCYNLRPYPSHSIW
Sbjct: 61  RKGFGSAQLESVSAVEDKEKKKDKDDGITWTCSWGVPHHSSYCYCYNLRPYPSHSIW 117

[Close]
BLAST of CsGy6G009470 vs. ExPASy TrEMBL
Match: A0A1S3BIE5 (uncharacterized protein LOC103490424 OS=Cucumis melo OX=3656 GN=LOC103490424 PE=4 SV=1)

HSP 1 Score: 211 bits (538), Expect = 7.62e-69
Identity = 105/120 (87.50%), Postives = 112/120 (93.33%), Query Frame = 0 

Query: 1   MKQKIVIQVSMKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELL 60
           MKQKIVI+VSMKRGPKYRSKALKIAASVKGSIETISLVGD KDKVEVVGD+DP+ELTELL
Sbjct: 1   MKQKIVIRVSMKRGPKYRSKALKIAASVKGSIETISLVGDDKDKVEVVGDIDPMELTELL 60

Query: 61  RKGFGSAQLESVSAVEDKEKKKDKDD----GITWTCSWGVPHHSSYCYCYNLRPYPSHSI 116
           RKGFGSAQLE+V+AVEDK+K KDKD     GITWTCSWGVPHHSSYCYCYNL PYPS+SI
Sbjct: 61  RKGFGSAQLETVNAVEDKDKDKDKDKNKDGGITWTCSWGVPHHSSYCYCYNLGPYPSYSI 120

[Close]
BLAST of CsGy6G009470 vs. ExPASy TrEMBL
Match: A0A5A7UY93 (Putative Heavy metal transport/detoxification superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G001130 PE=4 SV=1)

HSP 1 Score: 197 bits (502), Expect = 1.70e-63
Identity = 97/110 (88.18%), Postives = 102/110 (92.73%), Query Frame = 0 

Query: 11  MKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELLRKGFGSAQLE 70
           MKRGPKYRSKALKIAASVKGSIETISLVGD KDKVEVVGD+DPIELTELLRKGFGSAQLE
Sbjct: 1   MKRGPKYRSKALKIAASVKGSIETISLVGDDKDKVEVVGDIDPIELTELLRKGFGSAQLE 60

Query: 71  SVSAVEDKEKKKDKDD----GITWTCSWGVPHHSSYCYCYNLRPYPSHSI 116
           +V+AVEDK+K KDKD     GITWTCSWGVPHHSSYCYCYNL PYPS+SI
Sbjct: 61  TVNAVEDKDKDKDKDKNKDGGITWTCSWGVPHHSSYCYCYNLGPYPSYSI 110

[Close]
BLAST of CsGy6G009470 vs. ExPASy TrEMBL
Match: A0A6J1FYA9 (uncharacterized protein LOC111449069 OS=Cucurbita moschata OX=3662 GN=LOC111449069 PE=4 SV=1)

HSP 1 Score: 179 bits (453), Expect = 8.39e-56
Identity = 93/124 (75.00%), Postives = 103/124 (83.06%), Query Frame = 0 

Query: 1   MKQKIVIQVSMKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELL 60
           MKQKIVI+VSMKRG KYRS+ALKIAASV G IETISLVGD KDK+EVVGDLDPIELTE+L
Sbjct: 1   MKQKIVIRVSMKRGAKYRSQALKIAASVLGDIETISLVGDDKDKIEVVGDLDPIELTEML 60

Query: 61  RKGFGSAQLESVSAVE----DKEKKKDKDDG---ITWTCSWGVPHHSSYCYCYNLRPYPS 117
           RK FG AQLESVS VE    D++  KDKD+    ITWTCSWGVPH + YCYCY+  PYPS
Sbjct: 61  RKRFGCAQLESVSVVEAKKEDEDVNKDKDENEPQITWTCSWGVPHQTPYCYCYHC-PYPS 120

[Close]
BLAST of CsGy6G009470 vs. ExPASy TrEMBL
Match: A0A6J1J992 (uncharacterized protein LOC111484603 OS=Cucurbita maxima OX=3661 GN=LOC111484603 PE=4 SV=1)

HSP 1 Score: 169 bits (427), Expect = 7.20e-52
Identity = 91/126 (72.22%), Postives = 99/126 (78.57%), Query Frame = 0 

Query: 1   MKQKIVIQVSMKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELL 60
           MKQKIVI+VSMKRG KYRS+ALKIAASV G IETISLVGD KDK+EVVGDLDPIEL ++L
Sbjct: 1   MKQKIVIRVSMKRGSKYRSQALKIAASVSGDIETISLVGDDKDKIEVVGDLDPIELIKML 60

Query: 61  RKGFGSAQLESVSAVE----DKEKKKDKDDG-----ITWTCSWGVPHHSSYCYCYNLRPY 117
           RK FG AQLESVS VE    DK K KDKD       ITW CS GVPH + YCYCY+  PY
Sbjct: 61  RKKFGCAQLESVSVVEVKNEDKNKDKDKDKNENEPQITWMCSSGVPHQTPYCYCYH-GPY 120

The following BLAST results are available for this feature:
BLAST of CsGy6G009470 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy6G009470 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140067.11.23e-80100.00uncharacterized protein LOC101216311 [Cucumis sativus] >KGN46623.1 hypothetical ... [more]
XP_008448137.11.57e-6887.50PREDICTED: uncharacterized protein LOC103490424 [Cucumis melo][more]
KAA0060862.13.52e-6388.18putative Heavy metal transport/detoxification superfamily protein [Cucumis melo ... [more]
XP_038900437.18.89e-6383.19uncharacterized protein LOC120087662 [Benincasa hispida][more]
KAG7010798.17.36e-5775.81Heavy metal-associated isoprenylated plant protein 46, partial [Cucurbita argyro... [more]
BLAST of CsGy6G009470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAU75.94e-81100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G113600 PE=4 SV=1[more]
A0A1S3BIE57.62e-6987.50uncharacterized protein LOC103490424 OS=Cucumis melo OX=3656 GN=LOC103490424 PE=... [more]
A0A5A7UY931.70e-6388.18Putative Heavy metal transport/detoxification superfamily protein OS=Cucumis mel... [more]
A0A6J1FYA98.39e-5675.00uncharacterized protein LOC111449069 OS=Cucurbita moschata OX=3662 GN=LOC1114490... [more]
A0A6J1J9927.20e-5272.22uncharacterized protein LOC111484603 OS=Cucurbita maxima OX=3661 GN=LOC111484603... [more]
BLAST of CsGy6G009470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.100coord: 1..78
e-value: 1.3E-21
score: 78.5
NoneNo IPR availablePANTHERPTHR46371:SF7HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 46coord: 3..86
IPR044296Heavy metal-associated isoprenylated plant protein 16/46/47PANTHERPTHR46371OS04G0464100 PROTEINcoord: 3..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G009470.1CsGy6G009470.1mRNA