CsGy6G009110 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G009110
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr6: 7551663 .. 7552435 (+)
RNA-Seq Expression	CsGy6G009110
Synteny	CsGy6G009110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCCAAGTAGCCATACCATAAACTCAGCACGACCACAAAAAGAAGCCCTCCAACTTATACTGTATTTCTTTTCCTATTTGTCAAATCTAAAACCCCCCCTCCCCATCCAATTCTCTCTCTTCCCTTCACTTTCTTCTCCAAACCCCCCATTAATTTATTCCCTCCTCCTCCCTTAGGATCTACAACCCAAAAAAACAATAATATAGACACATACATACATATATACACACCCATCATGTGGCAGGTGTTCGCACTTATTCGCCCCACCCTCCACAACTTCACTAACAGCCACCGCATTGCTGATGAGAGTATGTTCACTTCAACTGATCAATTCCCAATTTACGCTGCCGCCAACAACCGTCGAACCTTCTCCTCCTCCATCTTCAACATCATTCGTGCTCCTTTCTCTATTCTCTCTTGCTTCGCTCCACCCGCCGTTCACCGCTCCCCCGACGCCTTCTGGCTCTCCGGTGACCACTATTTTGCCTCCACTATTTCTGAGATCAACCACCTTATGGTAAGCGATGGCATGCGTTACGCCATATTGATGTAAAAGCTCTAAAACTAATCTTACCAAGCACACATATATATGTATTAGAAGTACTTTAGCTTTTATTTTGGTGGTAACCTGATGAATAATCACTTGGGTTTTTGTTTTTGTTTGTCTCTTTTTTGGTTAAATTTGATTTAGCGTATTATGTTTCTAATTTGTTACCAGTCCCATAATCAAATTAAATTTATATATAAGAAAAAAAAGTTACTCTTTTCCCAAG

mRNA sequence

AGCCAAGTAGCCATACCATAAACTCAGCACGACCACAAAAAGAAGCCCTCCAACTTATACTGTATTTCTTTTCCTATTTGTCAAATCTAAAACCCCCCCTCCCCATCCAATTCTCTCTCTTCCCTTCACTTTCTTCTCCAAACCCCCCATTAATTTATTCCCTCCTCCTCCCTTAGGATCTACAACCCAAAAAAACAATAATATAGACACATACATACATATATACACACCCATCATGTGGCAGGTGTTCGCACTTATTCGCCCCACCCTCCACAACTTCACTAACAGCCACCGCATTGCTGATGAGAGTATGTTCACTTCAACTGATCAATTCCCAATTTACGCTGCCGCCAACAACCGTCGAACCTTCTCCTCCTCCATCTTCAACATCATTCGTGCTCCTTTCTCTATTCTCTCTTGCTTCGCTCCACCCGCCGTTCACCGCTCCCCCGACGCCTTCTGGCTCTCCGGTGACCACTATTTTGCCTCCACTATTTCTGAGATCAACCACCTTATGGTAAGCGATGGCATGCGTTACGCCATATTGATGTAAAAGCTCTAAAACTAATCTTACCAAGCACACATATATATGTATTAGAAGTACTTTAGCTTTTATTTTGGTGGTAACCTGATGAATAATCACTTGGGTTTTTGTTTTTGTTTGTCTCTTTTTTGGTTAAATTTGATTTAGCGTATTATGTTTCTAATTTGTTACCAGTCCCATAATCAAATTAAATTTATATATAAGAAAAAAAAGTTACTCTTTTCCCAAG

Coding sequence (CDS)

ATGTGGCAGGTGTTCGCACTTATTCGCCCCACCCTCCACAACTTCACTAACAGCCACCGCATTGCTGATGAGAGTATGTTCACTTCAACTGATCAATTCCCAATTTACGCTGCCGCCAACAACCGTCGAACCTTCTCCTCCTCCATCTTCAACATCATTCGTGCTCCTTTCTCTATTCTCTCTTGCTTCGCTCCACCCGCCGTTCACCGCTCCCCCGACGCCTTCTGGCTCTCCGGTGACCACTATTTTGCCTCCACTATTTCTGAGATCAACCACCTTATGGTAAGCGATGGCATGCGTTACGCCATATTGATGTAA

Protein sequence

MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAANNRRTFSSSIFNIIRAPFSILSCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM*

Homology

[Close]

BLAST of CsGy6G009110 vs. NCBI nr
Match: XP_011656875.1 (uncharacterized protein LOC105435779 [Cucumis sativus] >KGN46586.1 hypothetical protein Csa_005504 [Cucumis sativus])

HSP 1 Score: 219 bits (557), Expect = 7.21e-72
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAANNRRTFSSSIFNIIRAPFSIL 60
           MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAANNRRTFSSSIFNIIRAPFSIL
Sbjct: 1   MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAANNRRTFSSSIFNIIRAPFSIL 60

Query: 61  SCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 105
           SCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM
Sbjct: 61  SCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 105

[Close]

BLAST of CsGy6G009110 vs. NCBI nr
Match: KAA0053319.1 (uncharacterized protein E6C27_scaffold102G001420 [Cucumis melo var. makuwa])

HSP 1 Score: 205 bits (521), Expect = 2.32e-66
Identity = 98/106 (92.45%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 1   MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAA-NNRRTFSSSIFNIIRAPFSI 60
           MW+VFA+IRPTLHNFTNSHRIADESMFT+TDQFP YAAA NNRRTFS++IFNIIRAPFSI
Sbjct: 1   MWRVFAVIRPTLHNFTNSHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI 60

Query: 61  LSCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 105
           LSCFAPP+VHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM
Sbjct: 61  LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 106

[Close]

BLAST of CsGy6G009110 vs. NCBI nr
Match: XP_008455967.1 (PREDICTED: uncharacterized protein LOC103496030 [Cucumis melo] >TYK11891.1 uncharacterized protein E5676_scaffold177G00520 [Cucumis melo var. makuwa])

HSP 1 Score: 204 bits (518), Expect = 6.65e-66
Identity = 97/106 (91.51%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 1   MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAA-NNRRTFSSSIFNIIRAPFSI 60
           MW+VFA+IRPTLHNFTN+HRIADESMFT+TDQFP YAAA NNRRTFS++IFNIIRAPFSI
Sbjct: 1   MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI 60

Query: 61  LSCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 105
           LSCFAPP+VHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM
Sbjct: 61  LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 106

[Close]

BLAST of CsGy6G009110 vs. NCBI nr
Match: XP_022985817.1 (uncharacterized protein LOC111483748 [Cucurbita maxima])

HSP 1 Score: 164 bits (415), Expect = 3.98e-50
Identity = 82/113 (72.57%), Postives = 93/113 (82.30%), Query Frame = 0


Query: 1   MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAANNR--------RTFSSSIFNI 60
           MW++ A +RPTLHNFTNSHR+ADESMFT+T+ FPIYA AN+         RTFS+ +F+I
Sbjct: 1   MWRLIAALRPTLHNFTNSHRVADESMFTTTE-FPIYAVANHHHHRRPAAHRTFSA-VFSI 60

Query: 61  IRAPFSILSCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 105
           IRAPFSILSCFAPP VH S D FWLS DHYFASTISE NHLMVSDGMRYA+LM
Sbjct: 61  IRAPFSILSCFAPPPVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM 111

[Close]

BLAST of CsGy6G009110 vs. NCBI nr
Match: XP_023513038.1 (uncharacterized protein LOC111777603 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 164 bits (414), Expect = 5.83e-50
Identity = 82/114 (71.93%), Postives = 93/114 (81.58%), Query Frame = 0


Query: 1   MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAANNR---------RTFSSSIFN 60
           MW++ A +RPTLHNFTNSHR+ADESMFT+T+ FPIYA AN+          RTFS+ +F+
Sbjct: 1   MWRLIAALRPTLHNFTNSHRVADESMFTTTE-FPIYAVANHHHHRRRPAAHRTFSA-VFS 60

Query: 61  IIRAPFSILSCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 105
           IIRAPFSILSCFAPP VH S D FWLS DHYFASTISE NHLMVSDGMRYA+LM
Sbjct: 61  IIRAPFSILSCFAPPPVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM 112

[Close]

BLAST of CsGy6G009110 vs. ExPASy TrEMBL
Match: A0A0A0KFS1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G110050 PE=4 SV=1)

HSP 1 Score: 219 bits (557), Expect = 3.49e-72
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAANNRRTFSSSIFNIIRAPFSIL 60
           MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAANNRRTFSSSIFNIIRAPFSIL
Sbjct: 1   MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAANNRRTFSSSIFNIIRAPFSIL 60

Query: 61  SCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 105
           SCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM
Sbjct: 61  SCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 105

[Close]

BLAST of CsGy6G009110 vs. ExPASy TrEMBL
Match: A0A5A7UIL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001420 PE=4 SV=1)

HSP 1 Score: 205 bits (521), Expect = 1.12e-66
Identity = 98/106 (92.45%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 1   MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAA-NNRRTFSSSIFNIIRAPFSI 60
           MW+VFA+IRPTLHNFTNSHRIADESMFT+TDQFP YAAA NNRRTFS++IFNIIRAPFSI
Sbjct: 1   MWRVFAVIRPTLHNFTNSHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI 60

Query: 61  LSCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 105
           LSCFAPP+VHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM
Sbjct: 61  LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 106

[Close]

BLAST of CsGy6G009110 vs. ExPASy TrEMBL
Match: A0A5D3CJA9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00520 PE=4 SV=1)

HSP 1 Score: 204 bits (518), Expect = 3.22e-66
Identity = 97/106 (91.51%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 1   MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAA-NNRRTFSSSIFNIIRAPFSI 60
           MW+VFA+IRPTLHNFTN+HRIADESMFT+TDQFP YAAA NNRRTFS++IFNIIRAPFSI
Sbjct: 1   MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI 60

Query: 61  LSCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 105
           LSCFAPP+VHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM
Sbjct: 61  LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 106

[Close]

BLAST of CsGy6G009110 vs. ExPASy TrEMBL
Match: A0A1S3C290 (uncharacterized protein LOC103496030 OS=Cucumis melo OX=3656 GN=LOC103496030 PE=4 SV=1)

HSP 1 Score: 204 bits (518), Expect = 3.22e-66
Identity = 97/106 (91.51%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 1   MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAA-NNRRTFSSSIFNIIRAPFSI 60
           MW+VFA+IRPTLHNFTN+HRIADESMFT+TDQFP YAAA NNRRTFS++IFNIIRAPFSI
Sbjct: 1   MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI 60

Query: 61  LSCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 105
           LSCFAPP+VHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM
Sbjct: 61  LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 106

[Close]

BLAST of CsGy6G009110 vs. ExPASy TrEMBL
Match: A0A6J1J5Y3 (uncharacterized protein LOC111483748 OS=Cucurbita maxima OX=3661 GN=LOC111483748 PE=4 SV=1)

HSP 1 Score: 164 bits (415), Expect = 1.92e-50
Identity = 82/113 (72.57%), Postives = 93/113 (82.30%), Query Frame = 0


Query: 1   MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAANNR--------RTFSSSIFNI 60
           MW++ A +RPTLHNFTNSHR+ADESMFT+T+ FPIYA AN+         RTFS+ +F+I
Sbjct: 1   MWRLIAALRPTLHNFTNSHRVADESMFTTTE-FPIYAVANHHHHRRPAAHRTFSA-VFSI 60

Query: 61  IRAPFSILSCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 105
           IRAPFSILSCFAPP VH S D FWLS DHYFASTISE NHLMVSDGMRYA+LM
Sbjct: 61  IRAPFSILSCFAPPPVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM 111

[Close]

BLAST of CsGy6G009110 vs. TAIR 10
Match: AT5G35732.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04795.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 81.3 bits (199), Expect = 5.3e-16
Identity = 50/106 (47.17%), Postives = 67/106 (63.21%), Query Frame = 0


Query: 1   MWQVFALIRPTLHNFTNSHRIADES-MFTSTDQFPIYAAANNRRTFSSSIFNIIRAPFSI 60
           M Q+ +++R  L N   S R+AD++ + +ST        AN RR   +S+  I+R PFSI
Sbjct: 1   MTQMLSVLRRNLQNLRKSPRVADDTELPSSTSGAGPGVVANGRRDGFNSV--IMRFPFSI 60

Query: 61  LSCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 106
           +SCFA P V    D  W+SGD+    +ISE+NHLMVSD MRYAILM
Sbjct: 61  ISCFAVPRV-SGTDGLWVSGDY---GSISEVNHLMVSDSMRYAILM 100

[Close]

BLAST of CsGy6G009110 vs. TAIR 10
Match: AT2G04795.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35732.1); Has 18 Blast hits to 18 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 75.9 bits (185), Expect = 2.2e-14
Identity = 44/105 (41.90%), Postives = 61/105 (58.10%), Query Frame = 0


Query: 1   MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAANNRRTFSSSIFNIIRAPFSIL 60
           M ++ +++R  L N   S R+ADES   ST     +   N       S   I++ P SI+
Sbjct: 1   MLKMLSILRRNLQNLRKSPRVADESALPSTTVNGDHGGGN------GSNGGIMKFPLSIM 60

Query: 61  SCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 106
           SCF+ P V R+ D  W+SGD+     +SE+NHLMV DGMRYA+LM
Sbjct: 61  SCFSVPRVSRA-DGVWVSGDY---GRVSEVNHLMVCDGMRYALLM 95

The following BLAST results are available for this feature:

BLAST of CsGy6G009110 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G009110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656875.1	7.21e-72	100.00	uncharacterized protein LOC105435779 [Cucumis sativus] >KGN46586.1 hypothetical ...	[more]
KAA0053319.1	2.32e-66	92.45	uncharacterized protein E6C27_scaffold102G001420 [Cucumis melo var. makuwa]	[more]
XP_008455967.1	6.65e-66	91.51	PREDICTED: uncharacterized protein LOC103496030 [Cucumis melo] >TYK11891.1 uncha...	[more]
XP_022985817.1	3.98e-50	72.57	uncharacterized protein LOC111483748 [Cucurbita maxima]	[more]
XP_023513038.1	5.83e-50	71.93	uncharacterized protein LOC111777603 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy6G009110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFS1	3.49e-72	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G110050 PE=4 SV=1	[more]
A0A5A7UIL8	1.12e-66	92.45	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CJA9	3.22e-66	91.51	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C290	3.22e-66	91.51	uncharacterized protein LOC103496030 OS=Cucumis melo OX=3656 GN=LOC103496030 PE=...	[more]
A0A6J1J5Y3	1.92e-50	72.57	uncharacterized protein LOC111483748 OS=Cucurbita maxima OX=3661 GN=LOC111483748...	[more]

BLAST of CsGy6G009110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35732.1	5.3e-16	47.17	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G04795.1	2.2e-14	41.90	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR48165	BNAC03G44900D PROTEIN	coord: 1..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G009110.2	CsGy6G009110.2	mRNA