CsGy6G008220 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G008220
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	RNA-binding KH domain-containing protein PEPPER-like
Location	Gy14Chr6: 6846775 .. 6853340 (+)
RNA-Seq Expression	CsGy6G008220
Synteny	CsGy6G008220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAAACTAACCCTTTTCTTCTAGCTCTCCTCTCCTCCTCTCTTTTACCTTGTGTGTGTTCTTCTCTATGGTATCATCAACTATACTCATTTCTCTTCTCCATTCAAATCTTCGCACTCCGCCATCTTCCATATCTCACTGCCCTGAACACTCCTCCTAATATGCAACCAGGTGATATTCCTCTATACCCTTCCATGCCCGCCATGGCTCCTCTTCCTGTTTCCATGCCTTTACCCGGTACTCTCCTGGTCTCCGAGCCCGGACATACCGTCACCGGGAAACGCCGACGAGAGGATGACCTGATCGTTTCCAATTCGGATGCCTCGGATATATCGGCTCCTAAAAGACAAGCGAAGGCCCACGACGTGCTTTTCAGAATCGTTGTGCCATCCAAGCAGATCGGGAAGGTTATTGGTAAAGTTGGTTGTCGAATTCAGAAGGTTCGTGAGGAGACTAAAGCTACGATTAAGATTGCGGATGCAGTCGCGGTATTGTTCTTGTTATTTTTTATTTTGTGCGCTTTGGGGGTTAGGGTTTTCGGTTTTGCTATGGAGGAAGTGCTAATAGAAAACTTAATGTACCGGCGTGGTTTTTTCTTTTTTCTTTTTTGTCCCTTGAATCTTTTGCTGGTTGGTGGATTTCTTGGTGACAATTGGAGGTTTTGTGCTTCAGCGGTATGAAGAACGTGTCATCATTATAAGTTCGAAGGACAATGAGAATTCGGTTACTGATGCAGAGAAAGCACTTCAGCAAATTGCAGCACTGATATTGAAGGTCATACATCGCTAACTGCTAGACATGCTTTAGAGATGTTATATTTATTTTCTTGTGTGATGTTGTCTCAATTTTTTCTTCTTTGTTTATATTGTGAAAAGGGGAATTTCAAAGAAAATCAAGTTATGCGTGGTTACTTTAGGAAGGTTAATCACTGGGGACATTGTCCAAAGATCTTCGTCCATGGTTTTTGGATTTCCTAGTACGGTAATGCATATTGTGCAGGAAAGCCAAAAAAAATTCCTACTCCCAAAATAAAAAGAAAGAGAAAGGAACCGATTAAGAAAGTGACAAGAATTTGAACCAAGAATTGAGGTTGTCATTTCAGTTTCGTGTTTACACGTATTCATAATCAAATTTCATTTATTGAGTGACATATCTGTTTAAGAGCTTTCAGCTATACCACAGTGATGTTGGAGGAGGTTCTTGTTAATAGTTCTCTTTAAGGAGTTAGGTTCGTTTGGCAATTGCTTTTCTTTCTTTTTGCTATTGCATGGAATTTGTGGCTCGAGAGAAATAGGATGTTCTTAGGGATACATAAAAGGATTAGAGGAGGTTTGGAGTGTGACAAATTTAAATGCCTTTCTTTGGGAATTTTTGTTTTAAAGAGTTATATGATGCATCATTTTTTGTTCTTATCAATTAGAGCAATCTTCTGTATTTTGCTTTATGTCCTGTTTTTTATCTCTTTTGTTTGGAAGTTTTTTTCAGTAGGCTGTTGCTTTCTACAGAAGTTGCGTTTTAATATATATTAAACGAAAACACATTCTTTATCTGCAATTGTTCATATGTATACATATAAAAAGTACGCCTTATTCACAATGGTTGAAAGCTTCTTCATGAATGTTTCTATGCTGTATTGACGTGTATAATTAAGTAGGGATGATGGAGGTAACTGGTGTTATTGACTCCAATAAGGCTAGCAACTATAGTCCTTTTCTTTGACTGCCTTAAAAACTTTATTCTTTTTCCGTATAAAGAAGTAAAATATCTAGATGAAAACAAAAAGAGAATACTTGAAGTTATTGATTTTCAAGGCAGGGTAAGTAACAGCACTTCCATCATGTGATTGGTTCTTTTTTATTTTTTTACGAGCAACAGTGTGCAATTGAGCTAGCTTACCCTTAAATCCCCTTGACGAAATATCCCTCTGTTGTCAAGAACTTATCGTTGTTTTAAGTTTTAACCTGCAAGTGTGAATTGGTATGTTTTTGCCTAAATTATCTGTCCATACTTGACCAATTAAATTAGTCCTCTTCTTGAGGTGCAAATCCTCGTGTGGTAAAATAGAATGATAGCTTCATATATTTATTTTAGATCATTTTTTTAAAATTTTGTATCTGCTACTTCTTTTATTTTTATTATACTTATCATGATTTTACAGGAAGATGGTTCGAGCATTGAGGAACTAAAAGTTGGAACAGGGCATGTGGCTGCTAATACTATAAGGCTCCTAATAGCAGGATCTCAAGCAGGTTCCTTGATTGGTGCCTCAGGTCAAAATATTGAGAAATTGAGGAATTCTTCTGGTGCATCAATTACGATCCTTGCCCCAAATCAATTACCTCTTTGTGCATCTGCTCATGAATCGGACCGGGTGGTGCAAGTGAGTTTTTCCACTCTGTCAGAACTTAGAACATATGTAGTGTATCATTCTTTTTAATGACAAACAAGTATTATAGTGTATCATTCTTTCTTCCTTCCTATTAAGTTCATCACTATTTGTTTGAATCATAACGATATGATCAACGTTACAGCTATGCTTGATGCTATTGCAAGTAATGAGGTGAAAAGGAGTTTTGGTTTTACTTTTCTAACTGTTTTCTAAATGTTTGCTGATAGAAAAGATTGACTTTCATGAGTAGAGTGCATCTAACTAGAATTGGGTGATTCTTGTTATGAATATTGGCCACCCAAATACATATCCCTACGTTTGGAATCTCATTGGCATGGAGTGGTAGGGATTGGATGGGGAAGGTTTTATCATCTCACCCTTTTAGGGAGGACACTTTTCTTTGGGATATTCACACCTAGTGAATTTTGTAATGCCCAGATTTATAGATCAATGAAATTCAGCTTATTGAAGTGTATGCATCATTGTTTCTAGCCATTTCTGAGCCTTCTTTGCTGTTTGTCTCTATTACTCCTCCCTAGTTTGATTTGTGACGAATGTTTTCATATAATGAGAAGGAAGTTGTTAATAGCTTTTGTAGTTGTACACCTAGATAATATTTCTTAAACAATTCATTCTACAAGTTCTTGTTCCATGGGGATATTTTGATTTCACTCTGTAATCTATTCCAGACTATAACTATTTATACATTTTAGTGTGCTATCGTTATGAGAAATTGGAGTTTCAGAGTGGTTTGTTTCTTTGAGAAGCAGTTTCGTTTTGGAACTTAAGGTTGGCATTAGAAGATAAGTTACACTGTTTCTTTCAAGAGTGGGATACTCCCTTGCTGCTCTCTTCGATTCTGCTTTCTCCAGCATTTTTTTAAAATTTCAAGTTCCTCAATCATTCTAAAATGTTCACTTCACATGATATTTATCAAATCATCTTTCGAACCTTATGCAAATGTTTTGAATTTATCATGCCCATTTTCACATGCTACGCTACTTTTTTCCATGTCTTGTTATCACATTGTGTCCCATCTAGTTTCATTTTTGGAGATGTCTTTGTCTTGTTATCACATTGTGTCCCATCTAGTTTCATTTTTGGAGATGTCTAAGATCATGTTATGAGAGCTGGCACTAATGATCGGTTATGTTTCTTTTGGAACTCAGATATCAGGGGATATTCTGGCAGTCTTGAAGGCTCTTGAGGAGATAGGCAATCAACTAAGGTCCTAAATTGAACCAAGACTGAGAGTTTATCTGATTCATGCATACTTCTGTAACTTTTACTTAAACTTTGTGTAGTACAAGATAATTGCAGCAGATGTTATCAAGATCAGTCAAATCTTGGCGTCCTATTTTTCTTTCTTTCTTTTTTTTAGTTATTTTTGGTTGAATTCAATTTCAGGGTAAATCCACCTCGGCAAGTCATTTCAGTTAGCCCAACGTATAATTATAATACAATGCATCCGCCACAGTCGTATATGGATCCAACCTCAGGTTATTCAGTGGTTTTCTGTATCAAATAAATCATTTATGATTCTGTCTTTTGTGTGTCTGTGAAGTTTTAATATTTTTTCTTCTAACCACATCATCTTTAGGAAAACCAATCTTGCAGTTAATTATGTAACCTTCGAGATGTTGATATCGGAGACATTGGTGGGTGGGTTGATTGGGATTGGTGGCTTCAACATATCAAGAATCAGAAATGAATCTGGGGCTACCATCAAGGTCAGAAACCAAGCAGTTCTATTTCATCATGAAAGATCTTGAAATTCTATTCCTAAATCAATATCATTACAAGTTACATTATTCTTTACAGGTTTGTGGTGGCAGAGGTGAACAAAATTACAGGCAAATACAATTTGGTGGAAGTGCTGAACAGGCATGAGCTTTTCTCTTATTTTAAGTATCATCAACTAGAATGTCTTCAGAATATCTAGAGAATGCCTTGATTTTCTCCAACACCTTTTCTCTCGCTTTTCTTTTCTGTGAAGGAGCTTCAATTTGTATTGTTTTGTGGATGTTTATCAGGTAGCGTTGGCAAAACAAAGGGTTGATGAATATATTTATTCTCAGGTGATCCGACAAGCTGGTGTTCAACAGACAGCGTAGGTTTTCTTTCATAACTACTCTCCCTCTCCCTCTCCCTCCCTCCCTCTCTCTCCCTCCCTCTCTCTCCCTCCCTCTCTCTCCCTCCTTCTCCCTCTCCTGTGCGAAAAAAATAAAAAGAGAGAATAAAAACTTTCCTGTGGTTAAGCCATTGTCCAAGTTCTTGGGACCTTATCCCCAAAAAAAGAAAAAAAATCAGAAGTTTCATCAAAATCATACTACCATGGTGTTGGTAACACAAAATTCAAAACGTTAAGTTGTACTCGGTGATGCAATTTAGAGACAAGAATGACCTCCATTCGTGCTTGAAAAGAAAAATGATATACTGAATGGTAAGACTCCGTCAAGTTATAATATTTGAATATTTAGCTTTTGTCGGCTCAGGTAGGGATTTGGAATCATTTCATTTCATTCGGATTCACAATCTTTAGAAGTAGAAAATATCAAATATCTTAGAAGACTAATCACCTTTTTTCTCTCCCAAAACTTACTAATCAAATGTTTTGAAAAATCTATAAATACTAGAAGAAAGAATCCCAATCTGTATTCTGAAGAGAGAGCACATATAGTTATGGTACTTTGATTTCACATCTTGAGTAGATGTTAAATAACTCAATTTTAGAGGGTAGAATATCGAACTCTATACAAACTTGAGAACTTTGTTTCTTGTTTCAAGTTTGTTTCAATTGTTGTGGCTACTATTGTTTCATCTGCTTTATTCTATTCAACTCTTCTAACACATCCTATGAATGAACTTTGTTTTCTTTTTTACCCTCTGGGTTCATGAGTGAGTTCCCACCCATTCAACCATGAAAGTATCGTGCTATACACAAATTGAATGAGAAATTGTCTTATAAATGGTTAGGTTAAATTGCAATTTTAATCCTCATGCTTGTGCTTGATACCTATGATTTGGTTCAGTATGATTTTAGCTCATTACCACTATTAGTCCATATCCCAAAGAAAGTACATGTAAAACAAGTTGTTAACTAGTTAAAATCAAAAGACCTTGACTCAACAACAGGAGGGAATCCAATGAAATCCTAGAAAAAGACTTGCAAGGGAAGCCCTGGAGGGTAGGACTCCAAACACCAACATCCTTTCATCCAAACCTAAAGTCAAAAAACCCTTGACATCAAGGAGAGAAGAGAGGTCACCTCCGTCAGTTTCCGGTTTCCTATTGGACAAGGGTTGACGGAAAGCTGAATTCTTCAACCAAACCAAAAGGTCTCAACACCCAACAATTTTTTAATGAGGACAAATGATCTAATCAAACGCAGAAGAGGTGTCTATGCCCACCCAATTGGAAAATCTTACTTGGAATACGTTTTTGGGCTTGCTTTTTATTCTTTCATTTTATTTTTTTTCAAGGAAAGTCAGTTTCTTTAATTTTTTTAAAAAATGATAATATATAACCAAAATATTAAATGGTTCTTGTGGTAACAAAAAGAAAAAAAATCAGAGAGGGAGATCTGTGGTAGCTTGAGCTCTTATTTGATACAATATTGTTCAGTCTGCAGATGTGGTAAACCTCAAACAGAAAGAGAGTTGTTTTGATTGTAATGGCAAACATCTCCATGGGAAGCTCTGAAGGACAGCTCCTACAAACTTCAACCTGATGAATGCATGGATATTGATGATGAGTATTACTACACCTAATCAAGTGCTGCAGGATTTTGGAATAATGGCTTCCTTTTTCTTCTTCTTTATTTTAATTTTTTTCTTTTTCTTTTTTAAATGTGACATATTGTAATTGTGGCAAATAGTTGTCTGAATATTTTCTATATTAACTACTTAAAAGAGTTTCTATAGCTATTAAAGGCTACTAGGAAAAGTTTGGCTTCCAGCTCTGAGTCTTGAACTGAACTTTGATTTTTTCTCATTTGGTCGCTATTGATCGTATTGCTTTTTGTATGATCATTTAAAGTGCAAATGTAACTTTTTGTCCTTTTTTTCTTTTTGAATATGAAAATGCCAAGGTAAGTCGTTTCTCTATAGCCATATAAGTTGGTGAAGCCAAATTTATCTAACAATTTTTGTGAAGAGACAGTCCTAAGAGTTTGGGG

mRNA sequence

CTAAAACTAACCCTTTTCTTCTAGCTCTCCTCTCCTCCTCTCTTTTACCTTGTGTGTGTTCTTCTCTATGGTATCATCAACTATACTCATTTCTCTTCTCCATTCAAATCTTCGCACTCCGCCATCTTCCATATCTCACTGCCCTGAACACTCCTCCTAATATGCAACCAGGTGATATTCCTCTATACCCTTCCATGCCCGCCATGGCTCCTCTTCCTGTTTCCATGCCTTTACCCGGTACTCTCCTGGTCTCCGAGCCCGGACATACCGTCACCGGGAAACGCCGACGAGAGGATGACCTGATCGTTTCCAATTCGGATGCCTCGGATATATCGGCTCCTAAAAGACAAGCGAAGGCCCACGACGTGCTTTTCAGAATCGTTGTGCCATCCAAGCAGATCGGGAAGGTTATTGGTAAAGTTGGTTGTCGAATTCAGAAGGTTCGTGAGGAGACTAAAGCTACGATTAAGATTGCGGATGCAGTCGCGCGGTATGAAGAACGTGTCATCATTATAAGTTCGAAGGACAATGAGAATTCGGTTACTGATGCAGAGAAAGCACTTCAGCAAATTGCAGCACTGATATTGAAGGAAGATGGTTCGAGCATTGAGGAACTAAAAGTTGGAACAGGGCATGTGGCTGCTAATACTATAAGGCTCCTAATAGCAGGATCTCAAGCAGGTTCCTTGATTGGTGCCTCAGGTCAAAATATTGAGAAATTGAGGAATTCTTCTGGTGCATCAATTACGATCCTTGCCCCAAATCAATTACCTCTTTGTGCATCTGCTCATGAATCGGACCGGGTGGTGCAAATATCAGGGGATATTCTGGCAGTCTTGAAGGCTCTTGAGGAGATAGGCAATCAACTAAGGGTAAATCCACCTCGGCAAGTCATTTCAGTTAGCCCAACGTATAATTATAATACAATGCATCCGCCACAGTCGTATATGGATCCAACCTCAGTTAATTATGTAACCTTCGAGATGTTGATATCGGAGACATTGGTGGGTGGGTTGATTGGGATTGGTGGCTTCAACATATCAAGAATCAGAAATGAATCTGGGGCTACCATCAAGGTTTGTGGTGGCAGAGGTGAACAAAATTACAGGCAAATACAATTTGGTGGAAGTGCTGAACAGGTAGCGTTGGCAAAACAAAGGGTTGATGAATATATTTATTCTCAGGTGATCCGACAAGCTGGTGTTCAACAGACAGCTCTGCAGATGTGGTAAACCTCAAACAGAAAGAGAGTTGTTTTGATTGTAATGGCAAACATCTCCATGGGAAGCTCTGAAGGACAGCTCCTACAAACTTCAACCTGATGAATGCATGGATATTGATGATGAGTATTACTACACCTAATCAAGTGCTGCAGGATTTTGGAATAATGGCTTCCTTTTTCTTCTTCTTTATTTTAATTTTTTTCTTTTTCTTTTTTAAATGTGACATATTGTAATTGTGGCAAATAGTTGTCTGAATATTTTCTATATTAACTACTTAAAAGAGTTTCTATAGCTATTAAAGGCTACTAGGAAAAGTTTGGCTTCCAGCTCTGAGTCTTGAACTGAACTTTGATTTTTTCTCATTTGGTCGCTATTGATCGTATTGCTTTTTGTATGATCATTTAAAGTGCAAATGTAACTTTTTGTCCTTTTTTTCTTTTTGAATATGAAAATGCCAAGGTAAGTCGTTTCTCTATAGCCATATAAGTTGGTGAAGCCAAATTTATCTAACAATTTTTGTGAAGAGACAGTCCTAAGAGTTTGGGG

Coding sequence (CDS)

ATGCAACCAGGTGATATTCCTCTATACCCTTCCATGCCCGCCATGGCTCCTCTTCCTGTTTCCATGCCTTTACCCGGTACTCTCCTGGTCTCCGAGCCCGGACATACCGTCACCGGGAAACGCCGACGAGAGGATGACCTGATCGTTTCCAATTCGGATGCCTCGGATATATCGGCTCCTAAAAGACAAGCGAAGGCCCACGACGTGCTTTTCAGAATCGTTGTGCCATCCAAGCAGATCGGGAAGGTTATTGGTAAAGTTGGTTGTCGAATTCAGAAGGTTCGTGAGGAGACTAAAGCTACGATTAAGATTGCGGATGCAGTCGCGCGGTATGAAGAACGTGTCATCATTATAAGTTCGAAGGACAATGAGAATTCGGTTACTGATGCAGAGAAAGCACTTCAGCAAATTGCAGCACTGATATTGAAGGAAGATGGTTCGAGCATTGAGGAACTAAAAGTTGGAACAGGGCATGTGGCTGCTAATACTATAAGGCTCCTAATAGCAGGATCTCAAGCAGGTTCCTTGATTGGTGCCTCAGGTCAAAATATTGAGAAATTGAGGAATTCTTCTGGTGCATCAATTACGATCCTTGCCCCAAATCAATTACCTCTTTGTGCATCTGCTCATGAATCGGACCGGGTGGTGCAAATATCAGGGGATATTCTGGCAGTCTTGAAGGCTCTTGAGGAGATAGGCAATCAACTAAGGGTAAATCCACCTCGGCAAGTCATTTCAGTTAGCCCAACGTATAATTATAATACAATGCATCCGCCACAGTCGTATATGGATCCAACCTCAGTTAATTATGTAACCTTCGAGATGTTGATATCGGAGACATTGGTGGGTGGGTTGATTGGGATTGGTGGCTTCAACATATCAAGAATCAGAAATGAATCTGGGGCTACCATCAAGGTTTGTGGTGGCAGAGGTGAACAAAATTACAGGCAAATACAATTTGGTGGAAGTGCTGAACAGGTAGCGTTGGCAAAACAAAGGGTTGATGAATATATTTATTCTCAGGTGATCCGACAAGCTGGTGTTCAACAGACAGCTCTGCAGATGTGGTAA

Protein sequence

MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDISAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNESGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW*

Homology

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BLAST of CsGy6G008220 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.1e-17
Identity = 58/186 (31.18%), Postives = 103/186 (55.38%), Query Frame = 0


Query: 53  DASDISAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYE 112
           D +D +  +      D +FR++VP  ++G +IG+ G  I+K+ EET+A IK+ D      
Sbjct: 58  DTNDSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTP 117

Query: 113 ERVIIISSKDNENSVTDAEKALQQIAALILKEDG-SSIEELKVGTGHVAANTIRLLIAGS 172
           +R+++IS K+   +      A+  +  +  +  G    ++  V       +++RLL+A +
Sbjct: 118 DRIVLISGKEEPEAY--MSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVAST 177

Query: 173 QAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEE 232
           QA +LIG  G  I+ +  +SGAS+ IL+  + P  A+  + +R+V + G+ L +LKALE 
Sbjct: 178 QAINLIGKQGSLIKSIVENSGASVRILSEEETPFYAA--QDERIVDLQGEALKILKALEA 237

Query: 233 IGNQLR 238
           I   LR
Sbjct: 238 IVGHLR 239

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BLAST of CsGy6G008220 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.3e-15
Identity = 65/206 (31.55%), Postives = 109/206 (52.91%), Query Frame = 0


Query: 68  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENS 127
           + +FR++VP++++G +IG+ G  I+K+ EET+A IKI D      ER +++S K+  E+S
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245

Query: 128 VTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEK 187
           +  +   L ++   I+  DG   E  +       +   RLL+  SQAGSLIG  G  ++ 
Sbjct: 246 LPPSMDGLLRVHMRIV--DGLDGEASQAPPPSKVST--RLLVPASQAGSLIGKQGGTVKA 305

Query: 188 LRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLR-------VN 247
           ++ +S   + +L    LP+ A   + DRVV++ G+  +V +ALE I + LR       + 
Sbjct: 306 IQEASACIVRVLGSEDLPVFAL--QDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSII 365

Query: 248 PPRQVISVSPTYNYNTMHPPQSYMDP 266
           P  +     PT   + M PP     P
Sbjct: 366 PFFENQMQKPTRQMDHMPPPHQSWGP 385

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BLAST of CsGy6G008220 vs. ExPASy Swiss-Prot
Match: F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 4.7e-13
Identity = 55/171 (32.16%), Postives = 99/171 (57.89%), Query Frame = 0


Query: 68  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENS 127
           DV+F+I+  ++  G VIG  G  ++ +  ET A I + + +   EER+I +++ +N E  
Sbjct: 451 DVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQ 510

Query: 128 VTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEK 187
            + A+KA+  I + + +   + I    +  G  ++ T RL++  SQ G ++G  G  + +
Sbjct: 511 SSPAQKAIMLIFSRLFELATNKI----LDNGPRSSITARLVVPTSQIGCVLGKGGVIVSE 570

Query: 188 LRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLR 238
           +R ++GA+I IL   Q P C S  E+D+VVQI+G+   V +A+  I ++LR
Sbjct: 571 MRKTTGAAIQILKVEQNPKCIS--ENDQVVQITGEFPNVREAIFHITSRLR 615

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BLAST of CsGy6G008220 vs. ExPASy Swiss-Prot
Match: P57721 (Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 3.1e-12
Identity = 82/332 (24.70%), Postives = 139/332 (41.87%), Query Frame = 0


Query: 72  RIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSVTDAE 131
           R+++  K++G +IGK G  ++K+REE+ A I I++      ER++ I+        TDA 
Sbjct: 49  RLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGP------TDAI 108

Query: 132 KALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSS 191
                + A   +ED  +       T      T+RL++  SQ GSLIG  G  I+++R S+
Sbjct: 109 FKAFAMIAYKFEEDIINSMSNSPATSKPPV-TLRLVVPASQCGSLIGKGGSKIKEIREST 168

Query: 192 GASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPR--------- 251
           GA + + A + LP     + ++R V ISG   A+++ +++I   +  +PP+         
Sbjct: 169 GAQVQV-AGDMLP-----NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPK 228

Query: 252 --------------------------QVISVSPTYNYNTMHPPQSYMDP----------- 311
                                     Q+  +       T  PP    +P           
Sbjct: 229 PASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHS 288

Query: 312 ---------------TSVNYVTFEMLISETLVGGLIGIGGFNISRIRNESGATIKVCGGR 343
                           S    T E+ I   L+G +IG  G  I+ IR  SGA IK+    
Sbjct: 289 SEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT 348

[Close]

BLAST of CsGy6G008220 vs. ExPASy Swiss-Prot
Match: P57722 (Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3)

HSP 1 Score: 74.3 bits (181), Expect = 3.1e-12
Identity = 82/332 (24.70%), Postives = 139/332 (41.87%), Query Frame = 0


Query: 72  RIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSVTDAE 131
           R+++  K++G +IGK G  ++K+REE+ A I I++      ER++ I+        TDA 
Sbjct: 49  RLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGP------TDAI 108

Query: 132 KALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSS 191
                + A   +ED  +       T      T+RL++  SQ GSLIG  G  I+++R S+
Sbjct: 109 FKAFAMIAYKFEEDIINSMSNSPATSKPPV-TLRLVVPASQCGSLIGKGGSKIKEIREST 168

Query: 192 GASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPR--------- 251
           GA + + A + LP     + ++R V ISG   A+++ +++I   +  +PP+         
Sbjct: 169 GAQVQV-AGDMLP-----NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPK 228

Query: 252 --------------------------QVISVSPTYNYNTMHPPQSYMDP----------- 311
                                     Q+  +       T  PP    +P           
Sbjct: 229 PASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHS 288

Query: 312 ---------------TSVNYVTFEMLISETLVGGLIGIGGFNISRIRNESGATIKVCGGR 343
                           S    T E+ I   L+G +IG  G  I+ IR  SGA IK+    
Sbjct: 289 SEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT 348

[Close]

BLAST of CsGy6G008220 vs. NCBI nr
Match: XP_011656837.1 (RNA-binding KH domain-containing protein PEPPER [Cucumis sativus] >KGN46494.1 hypothetical protein Csa_005583 [Cucumis sativus])

HSP 1 Score: 679 bits (1753), Expect = 6.97e-246
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDISAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDISAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDISAP 60

Query: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180
           KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS
Sbjct: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180

Query: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP 240
           GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP
Sbjct: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP 240

Query: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300
           PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Sbjct: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300

Query: 301 GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW 356
           GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW
Sbjct: 301 GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW 356

[Close]

BLAST of CsGy6G008220 vs. NCBI nr
Match: XP_008459768.1 (PREDICTED: RNA-binding KH domain-containing protein PEPPER-like [Cucumis melo])

HSP 1 Score: 679 bits (1752), Expect = 9.90e-246
Identity = 355/356 (99.72%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDISAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASD+SAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDVSAP 60

Query: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180
           KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS
Sbjct: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180

Query: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP 240
           GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP
Sbjct: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP 240

Query: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300
           PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Sbjct: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300

Query: 301 GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW 356
           GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW
Sbjct: 301 GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW 356

[Close]

BLAST of CsGy6G008220 vs. NCBI nr
Match: KAA0039772.1 (RNA-binding KH domain-containing protein PEPPER-like [Cucumis melo var. makuwa] >TYK24725.1 RNA-binding KH domain-containing protein PEPPER-like [Cucumis melo var. makuwa])

HSP 1 Score: 669 bits (1727), Expect = 5.51e-242
Identity = 351/352 (99.72%), Postives = 352/352 (100.00%), Query Frame = 0


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDISAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASD+SAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDVSAP 60

Query: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180
           KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS
Sbjct: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180

Query: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP 240
           GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP
Sbjct: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP 240

Query: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300
           PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Sbjct: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300

Query: 301 GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTA 352
           GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTA
Sbjct: 301 GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTA 352

[Close]

BLAST of CsGy6G008220 vs. NCBI nr
Match: XP_038875599.1 (flowering locus K homology domain-like isoform X1 [Benincasa hispida])

HSP 1 Score: 664 bits (1713), Expect = 8.70e-240
Identity = 346/356 (97.19%), Postives = 352/356 (98.88%), Query Frame = 0


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDISAP 60
           MQPGDIPLYPS+P MAPLPVSMPLPGTLLVSEPGHTVTGKRRREDD IV NS+ASD+SAP
Sbjct: 1   MQPGDIPLYPSIPPMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAP 60

Query: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180
           KDN+NSVTDAEKALQQIAALILKEDG+S+EELKVGTGHVAANTIRLLIAGSQAGSLIGAS
Sbjct: 121 KDNDNSVTDAEKALQQIAALILKEDGTSVEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180

Query: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP 240
           GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLRVNP
Sbjct: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNP 240

Query: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300
           PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Sbjct: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300

Query: 301 GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW 356
           GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW
Sbjct: 301 GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW 356

[Close]

BLAST of CsGy6G008220 vs. NCBI nr
Match: XP_022959402.1 (flowering locus K homology domain-like [Cucurbita moschata])

HSP 1 Score: 655 bits (1690), Expect = 2.78e-236
Identity = 341/356 (95.79%), Postives = 350/356 (98.31%), Query Frame = 0


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDISAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVS+ GHTVTGKRRREDDLIVSNS+A D+SAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAP 60

Query: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRI+VPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180
           KD ENSVTDAEKALQ IAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS
Sbjct: 121 KDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180

Query: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP 240
           GQNIEKLRNSSGA+ITILAPNQLPLCASAHESDRVVQISGD+ AVLKALEEIGNQLRVNP
Sbjct: 181 GQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNP 240

Query: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300
           PRQVISVSPTYNYN MHPPQSY+DPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Sbjct: 241 PRQVISVSPTYNYNAMHPPQSYIDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300

Query: 301 GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW 356
           GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQ+IRQAGVQQTALQMW
Sbjct: 301 GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLIRQAGVQQTALQMW 356

[Close]

BLAST of CsGy6G008220 vs. ExPASy TrEMBL
Match: A0A0A0KCF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G103530 PE=4 SV=1)

HSP 1 Score: 679 bits (1753), Expect = 3.38e-246
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDISAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDISAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDISAP 60

Query: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180
           KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS
Sbjct: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180

Query: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP 240
           GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP
Sbjct: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP 240

Query: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300
           PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Sbjct: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300

Query: 301 GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW 356
           GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW
Sbjct: 301 GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW 356

[Close]

BLAST of CsGy6G008220 vs. ExPASy TrEMBL
Match: A0A1S3CB11 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucumis melo OX=3656 GN=LOC103498803 PE=4 SV=1)

HSP 1 Score: 679 bits (1752), Expect = 4.80e-246
Identity = 355/356 (99.72%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDISAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASD+SAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDVSAP 60

Query: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180
           KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS
Sbjct: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180

Query: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP 240
           GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP
Sbjct: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP 240

Query: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300
           PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Sbjct: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300

Query: 301 GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW 356
           GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW
Sbjct: 301 GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW 356

[Close]

BLAST of CsGy6G008220 vs. ExPASy TrEMBL
Match: A0A5A7T8H9 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002850 PE=4 SV=1)

HSP 1 Score: 669 bits (1727), Expect = 2.67e-242
Identity = 351/352 (99.72%), Postives = 352/352 (100.00%), Query Frame = 0


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDISAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASD+SAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDVSAP 60

Query: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180
           KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS
Sbjct: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180

Query: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP 240
           GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP
Sbjct: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP 240

Query: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300
           PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Sbjct: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300

Query: 301 GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTA 352
           GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTA
Sbjct: 301 GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTA 352

[Close]

BLAST of CsGy6G008220 vs. ExPASy TrEMBL
Match: A0A6J1H4F3 (flowering locus K homology domain-like OS=Cucurbita moschata OX=3662 GN=LOC111460387 PE=4 SV=1)

HSP 1 Score: 655 bits (1690), Expect = 1.35e-236
Identity = 341/356 (95.79%), Postives = 350/356 (98.31%), Query Frame = 0


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDISAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVS+ GHTVTGKRRREDDLIVSNS+A D+SAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAP 60

Query: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRI+VPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180
           KD ENSVTDAEKALQ IAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS
Sbjct: 121 KDCENSVTDAEKALQHIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGAS 180

Query: 181 GQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNP 240
           GQNIEKLRNSSGA+ITILAPNQLPLCASAHESDRVVQISGD+ AVLKALEEIGNQLRVNP
Sbjct: 181 GQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVNP 240

Query: 241 PRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300
           PRQVISVSPTYNYN MHPPQSY+DPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Sbjct: 241 PRQVISVSPTYNYNAMHPPQSYIDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES 300

Query: 301 GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW 356
           GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQ+IRQAGVQQTALQMW
Sbjct: 301 GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLIRQAGVQQTALQMW 356

[Close]

BLAST of CsGy6G008220 vs. ExPASy TrEMBL
Match: A0A6J1L0K4 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661 GN=LOC111499279 PE=4 SV=1)

HSP 1 Score: 649 bits (1673), Expect = 5.45e-234
Identity = 340/357 (95.24%), Postives = 349/357 (97.76%), Query Frame = 0


Query: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDLIVSNSDASDISAP 60
           MQPGDIPLYPSMPAMAPLPVSMPLPG LLVS+ GHTVTGKRRREDDLIVSNS+A D+SAP
Sbjct: 1   MQPGDIPLYPSMPAMAPLPVSMPLPGALLVSDSGHTVTGKRRREDDLIVSNSEAVDVSAP 60

Query: 61  KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
           KRQAKAHDVLFRI+VPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS
Sbjct: 61  KRQAKAHDVLFRIIVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120

Query: 121 KDNENSVTDAEKALQQIAALILKEDGS-SIEELKVGTGHVAANTIRLLIAGSQAGSLIGA 180
           KD ENSVTDAEKALQ IAALILKEDG+ SIEELKVGTGHVAANTIRLLIAGSQAGSLIGA
Sbjct: 121 KDCENSVTDAEKALQHIAALILKEDGTTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGA 180

Query: 181 SGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVN 240
           SGQNIEKLRNSSGA+ITILAPNQLPLCASAHESDRVVQISGD+ AVLKALEEIGNQLRVN
Sbjct: 181 SGQNIEKLRNSSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVN 240

Query: 241 PPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNE 300
           PPRQVISVSPTYNYN MHPPQSY+DPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNE
Sbjct: 241 PPRQVISVSPTYNYNAMHPPQSYIDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNE 300

Query: 301 SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW 356
           SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQ+IRQAGVQQTALQMW
Sbjct: 301 SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLIRQAGVQQTALQMW 357

[Close]

BLAST of CsGy6G008220 vs. TAIR 10
Match: AT5G15270.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 109.8 bits (273), Expect = 4.7e-24
Identity = 93/289 (32.18%), Postives = 147/289 (50.87%), Query Frame = 0


Query: 68  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVI-IISSKDNENS 127
           D +FR + P K+IG VIG+ G  ++++R +T++ I+I +A+   +ERVI I S  D  N+
Sbjct: 49  DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNA 108

Query: 128 VTDAEK-------ALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGA 187
             D EK       AL +I   ++ +D  S E+   G   V   T +LL+   Q G ++G 
Sbjct: 109 FGDGEKVLSPAQDALFRIHDRVVADDARS-EDSPEGEKQV---TAKLLVPSDQIGCILGR 168

Query: 188 SGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVN 247
            GQ ++ +R+ +GA I I+    +PLCA    SD ++QISG++L V KAL +I ++L  N
Sbjct: 169 GGQIVQNIRSETGAQIRIVKDRNMPLCAL--NSDELIQISGEVLIVKKALLQIASRLHEN 228

Query: 248 PPR--QVISVSPTYNYNTM-------------------------------HPPQSYMDPT 307
           P R   ++S S  Y   ++                                PP++  DP 
Sbjct: 229 PSRSQNLLSSSGGYPAGSLMSHAGGPRLVGLAPLMGSYGRDAGDWSRPLYQPPRN--DPP 288

Query: 308 SVNYVTFEMLISET-LVGGLIGIGGFNISRIRNESGATIKVCGGRGEQN 315
           +  +  F  L+S    +  +IG GG  I+++R E+ ATIKV   R E N
Sbjct: 289 ATEF--FIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGN 327

[Close]

BLAST of CsGy6G008220 vs. TAIR 10
Match: AT5G15270.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 109.8 bits (273), Expect = 4.7e-24
Identity = 93/289 (32.18%), Postives = 147/289 (50.87%), Query Frame = 0


Query: 68  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVI-IISSKDNENS 127
           D +FR + P K+IG VIG+ G  ++++R +T++ I+I +A+   +ERVI I S  D  N+
Sbjct: 49  DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNA 108

Query: 128 VTDAEK-------ALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGA 187
             D EK       AL +I   ++ +D  S E+   G   V   T +LL+   Q G ++G 
Sbjct: 109 FGDGEKVLSPAQDALFRIHDRVVADDARS-EDSPEGEKQV---TAKLLVPSDQIGCILGR 168

Query: 188 SGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVN 247
            GQ ++ +R+ +GA I I+    +PLCA    SD ++QISG++L V KAL +I ++L  N
Sbjct: 169 GGQIVQNIRSETGAQIRIVKDRNMPLCAL--NSDELIQISGEVLIVKKALLQIASRLHEN 228

Query: 248 PPR--QVISVSPTYNYNTM-------------------------------HPPQSYMDPT 307
           P R   ++S S  Y   ++                                PP++  DP 
Sbjct: 229 PSRSQNLLSSSGGYPAGSLMSHAGGPRLVGLAPLMGSYGRDAGDWSRPLYQPPRN--DPP 288

Query: 308 SVNYVTFEMLISET-LVGGLIGIGGFNISRIRNESGATIKVCGGRGEQN 315
           +  +  F  L+S    +  +IG GG  I+++R E+ ATIKV   R E N
Sbjct: 289 ATEF--FIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGN 327

[Close]

BLAST of CsGy6G008220 vs. TAIR 10
Match: AT1G14170.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 99.8 bits (247), Expect = 4.8e-21
Identity = 82/269 (30.48%), Postives = 138/269 (51.30%), Query Frame = 0


Query: 67  HDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE-- 126
           HD ++R + P K+ G +IGK G   +++R ETK+ ++I +A+   EERV+ + S + E  
Sbjct: 9   HDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELN 68

Query: 127 ------NSVTDAEKALQQIAALIL----KEDGSSIEELKVGTGHVAANTIRLLIAGSQAG 186
                   V  A  AL ++  +++    ++DG+  +      G     T+R+L+   Q G
Sbjct: 69  HFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDN---DLGEKQTVTVRMLVPSDQIG 128

Query: 187 SLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGN 246
            +IG  GQ I+ LRN + A I ++  + LP CA     D ++ I G+ L V +AL ++ +
Sbjct: 129 CVIGKGGQVIQNLRNDTNAQIRVI-KDHLPACALTLSHDELLLIIGEPLVVREALYQVAS 188

Query: 247 QLRVNPPR-QVISVSPTYNYNTMHPPQSYMDPTSV-----NYVTFE-----------MLI 306
            L  NP R Q + +S   + ++MH P + +   ++     NY                + 
Sbjct: 189 LLHDNPSRFQHLLLSS--SSSSMHQPGAMLMSAALTSSHRNYAVRRDIADAREFCVCFIC 248

[Close]

BLAST of CsGy6G008220 vs. TAIR 10
Match: AT1G14170.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 97.1 bits (240), Expect = 3.1e-20
Identity = 81/270 (30.00%), Postives = 138/270 (51.11%), Query Frame = 0


Query: 66  AHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE- 125
           + D ++R + P K+ G +IGK G   +++R ETK+ ++I +A+   EERV+ + S + E 
Sbjct: 16  SEDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEEL 75

Query: 126 -------NSVTDAEKALQQIAALIL----KEDGSSIEELKVGTGHVAANTIRLLIAGSQA 185
                    V  A  AL ++  +++    ++DG+  +      G     T+R+L+   Q 
Sbjct: 76  NHFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDN---DLGEKQTVTVRMLVPSDQI 135

Query: 186 GSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIG 245
           G +IG  GQ I+ LRN + A I ++  + LP CA     D ++ I G+ L V +AL ++ 
Sbjct: 136 GCVIGKGGQVIQNLRNDTNAQIRVI-KDHLPACALTLSHDELLLIIGEPLVVREALYQVA 195

Query: 246 NQLRVNPPR-QVISVSPTYNYNTMHPPQSYMDPTSV-----NYVTFE-----------ML 305
           + L  NP R Q + +S   + ++MH P + +   ++     NY                +
Sbjct: 196 SLLHDNPSRFQHLLLSS--SSSSMHQPGAMLMSAALTSSHRNYAVRRDIADAREFCVCFI 255

Query: 306 ISETLVGGLIGIGGFNISRIRNESGATIKV 307
                VGG+IG GG  I++IR E+GATI+V
Sbjct: 256 CPAENVGGVIGKGGGFINQIRQETGATIRV 279

[Close]

BLAST of CsGy6G008220 vs. TAIR 10
Match: AT1G14170.3 (RNA-binding KH domain-containing protein )

HSP 1 Score: 97.1 bits (240), Expect = 3.1e-20
Identity = 81/270 (30.00%), Postives = 138/270 (51.11%), Query Frame = 0


Query: 66  AHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE- 125
           + D ++R + P K+ G +IGK G   +++R ETK+ ++I +A+   EERV+ + S + E 
Sbjct: 41  SEDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEEL 100

Query: 126 -------NSVTDAEKALQQIAALIL----KEDGSSIEELKVGTGHVAANTIRLLIAGSQA 185
                    V  A  AL ++  +++    ++DG+  +      G     T+R+L+   Q 
Sbjct: 101 NHFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDN---DLGEKQTVTVRMLVPSDQI 160

Query: 186 GSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIG 245
           G +IG  GQ I+ LRN + A I ++  + LP CA     D ++ I G+ L V +AL ++ 
Sbjct: 161 GCVIGKGGQVIQNLRNDTNAQIRVI-KDHLPACALTLSHDELLLIIGEPLVVREALYQVA 220

Query: 246 NQLRVNPPR-QVISVSPTYNYNTMHPPQSYMDPTSV-----NYVTFE-----------ML 305
           + L  NP R Q + +S   + ++MH P + +   ++     NY                +
Sbjct: 221 SLLHDNPSRFQHLLLSS--SSSSMHQPGAMLMSAALTSSHRNYAVRRDIADAREFCVCFI 280

Query: 306 ISETLVGGLIGIGGFNISRIRNESGATIKV 307
                VGG+IG GG  I++IR E+GATI+V
Sbjct: 281 CPAENVGGVIGKGGGFINQIRQETGATIRV 304

The following BLAST results are available for this feature:

BLAST of CsGy6G008220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZH4	4.1e-17	31.18	RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SR13	2.3e-15	31.55	Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV...	[more]
F4KDN0	4.7e-13	32.16	KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S...	[more]
P57721	3.1e-12	24.70	Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2	[more]
P57722	3.1e-12	24.70	Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3	[more]

BLAST of CsGy6G008220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656837.1	6.97e-246	100.00	RNA-binding KH domain-containing protein PEPPER [Cucumis sativus] >KGN46494.1 hy...	[more]
XP_008459768.1	9.90e-246	99.72	PREDICTED: RNA-binding KH domain-containing protein PEPPER-like [Cucumis melo]	[more]
KAA0039772.1	5.51e-242	99.72	RNA-binding KH domain-containing protein PEPPER-like [Cucumis melo var. makuwa] ...	[more]
XP_038875599.1	8.70e-240	97.19	flowering locus K homology domain-like isoform X1 [Benincasa hispida]	[more]
XP_022959402.1	2.78e-236	95.79	flowering locus K homology domain-like [Cucurbita moschata]	[more]

BLAST of CsGy6G008220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCF8	3.38e-246	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G103530 PE=4 SV=1	[more]
A0A1S3CB11	4.80e-246	99.72	RNA-binding KH domain-containing protein PEPPER-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5A7T8H9	2.67e-242	99.72	RNA-binding KH domain-containing protein PEPPER-like OS=Cucumis melo var. makuwa...	[more]
A0A6J1H4F3	1.35e-236	95.79	flowering locus K homology domain-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1L0K4	5.45e-234	95.24	RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of CsGy6G008220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15270.2	4.7e-24	32.18	RNA-binding KH domain-containing protein	[more]
AT5G15270.1	4.7e-24	32.18	RNA-binding KH domain-containing protein	[more]
AT1G14170.2	4.8e-21	30.48	RNA-binding KH domain-containing protein	[more]
AT1G14170.1	3.1e-20	30.00	RNA-binding KH domain-containing protein	[more]
AT1G14170.3	3.1e-20	30.00	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 67..142 e-value: 7.8E-9 score: 45.4 coord: 269..339 e-value: 4.0E-6 score: 36.3 coord: 160..237 e-value: 3.8E-11 score: 53.0
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 263..342 e-value: 2.4E-14 score: 54.7
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 67..145 e-value: 3.1E-14 score: 54.4
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 160..240 e-value: 5.3E-16 score: 60.1
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 264..344
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 66..137
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 156..237
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 72..135 e-value: 2.0E-10 score: 40.3 coord: 272..335 e-value: 2.4E-10 score: 40.1 coord: 163..232 e-value: 5.2E-12 score: 45.4
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 32..351
None	No IPR available	PANTHER	PTHR10288:SF265	POLY(RC)-BINDING PROTEIN 4-LIKE	coord: 32..351
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 270..334 score: 12.998854
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 68..134 score: 14.969395
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 161..232 score: 14.696873
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 71..121 e-value: 3.16714E-12 score: 59.0271
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 163..232 e-value: 6.94548E-17 score: 72.1239
None	No IPR available	CDD	cd00105	KH-I	coord: 292..334 e-value: 4.34004E-4 score: 36.384

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G008220.2	CsGy6G008220.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding