CsGy6G003595 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G003595
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptioneIF-2-alpha kinase GCN2 isoform X4
LocationGy14Chr6: 3322710 .. 3323121 (+)
RNA-Seq ExpressionCsGy6G003595
SyntenyCsGy6G003595
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTTGGCGCCGCCATTGAAGGCAATTGGAAGACGGATGGTTCGTAGGAGCTCGTCTGTTCATGAACGTAACGACGGAGTCTTCCAGAAATCGAATTCCGAATTTATAATCATAGCAGGATCAAAATCAGCTGCCCACCGTCTAAGAATATCCGTTTGATTTCATTCATTTTTTATCTCAATCTCAGCTGACTTTTGTTCCGCGTATTCCTGCTGCTTCATTCACGTGTGGCCCTCGTTCTTGCCACTCCAAAACGCCACAGAACTTCAGTTTTTCCACTTTGAGGTTATTTCATTTCATCGGATCAGCTGAAGGTTCTCATGTAGATTGTTATTGTTATGCATATGTATTGAATGATGGTTTTTCATTGAATTTTGGACTAGACCTATGCGAGAGTAAGAGAGGTTGA

mRNA sequence

ATGGTTTTGGCGCCGCCATTGAAGGCAATTGGAAGACGGATGGTTCGTAGGAGCTCGTCTGTTCATGAACGTAACGACGGAGTCTTCCAGAAATCGAATTCCGAATTTATAATCATAGCAGGATCAAAATCAGCTGCCCACCGTCTAAGAATATCCCTGACTTTTGTTCCGCGTATTCCTGCTGCTTCATTCACGTGTGGCCCTCGTTCTTGCCACTCCAAAACGCCACAGAACTTCAGTTTTTCCACTTTGAGGTTATTTCATTTCATCGGATCAGCTGAAGGTTCTCATGTAGATTGTTATTGTTATGCATATGTATTGAATGATGGTTTTTCATTGAATTTTGGACTAGACCTATGCGAGAGTAAGAGAGGTTGA

Coding sequence (CDS)

ATGGTTTTGGCGCCGCCATTGAAGGCAATTGGAAGACGGATGGTTCGTAGGAGCTCGTCTGTTCATGAACGTAACGACGGAGTCTTCCAGAAATCGAATTCCGAATTTATAATCATAGCAGGATCAAAATCAGCTGCCCACCGTCTAAGAATATCCCTGACTTTTGTTCCGCGTATTCCTGCTGCTTCATTCACGTGTGGCCCTCGTTCTTGCCACTCCAAAACGCCACAGAACTTCAGTTTTTCCACTTTGAGGTTATTTCATTTCATCGGATCAGCTGAAGGTTCTCATGTAGATTGTTATTGTTATGCATATGTATTGAATGATGGTTTTTCATTGAATTTTGGACTAGACCTATGCGAGAGTAAGAGAGGTTGA

Protein sequence

MVLAPPLKAIGRRMVRRSSSVHERNDGVFQKSNSEFIIIAGSKSAAHRLRISLTFVPRIPAASFTCGPRSCHSKTPQNFSFSTLRLFHFIGSAEGSHVDCYCYAYVLNDGFSLNFGLDLCESKRG*
Homology
[Close]
BLAST of CsGy6G003595 vs. NCBI nr
Match: KGN46004.1 (hypothetical protein Csa_005256 [Cucumis sativus])

HSP 1 Score: 254 bits (649), Expect = 2.92e-85
Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 0 

Query: 1   MVLAPPLKAIGRRMVRRSSSVHERNDGVFQKSNSEFIIIAGSKSAAHRLRISLTFVPRIP 60
           MVLAPPLKAIGRRMVRRSSSVHERNDGVFQKSNSEFIIIAGSKSAAHRLRISLTFVPRIP
Sbjct: 1   MVLAPPLKAIGRRMVRRSSSVHERNDGVFQKSNSEFIIIAGSKSAAHRLRISLTFVPRIP 60

Query: 61  AASFTCGPRSCHSKTPQNFSFSTLRLFHFIGSAEGSHVDCYCYAYVLNDGFSLNFGLDLC 120
           AASFTC PRSCHSKTPQNFSFSTLRLFHFIGSAEGSHVDCYCYAYVLNDGFSLNFGLDLC
Sbjct: 61  AASFTCVPRSCHSKTPQNFSFSTLRLFHFIGSAEGSHVDCYCYAYVLNDGFSLNFGLDLC 120

Query: 121 ESKRG 125
           ESKRG
Sbjct: 121 ESKRG 125

[Close]
BLAST of CsGy6G003595 vs. NCBI nr
Match: KAA0033037.1 (eIF-2-alpha kinase GCN2 isoform X4 [Cucumis melo var. makuwa] >TYK03452.1 eIF-2-alpha kinase GCN2 isoform X4 [Cucumis melo var. makuwa])

HSP 1 Score: 62.4 bits (150), Expect = 2.08e-08
Identity = 32/39 (82.05%), Postives = 32/39 (82.05%), Query Frame = 0 

Query: 14 MVRRSSSVHERNDGVFQKSNSEFIIIAGSKSAAHRLRIS 52
          MV RSS VH RNDGVFQKSNSEF II GSKSA HRLR S
Sbjct: 1  MVLRSSPVHARNDGVFQKSNSEFRIITGSKSAVHRLRSS 39

[Close]
BLAST of CsGy6G003595 vs. ExPASy TrEMBL
Match: A0A0A0KB15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G042380 PE=4 SV=1)

HSP 1 Score: 254 bits (649), Expect = 1.42e-85
Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 0 

Query: 1   MVLAPPLKAIGRRMVRRSSSVHERNDGVFQKSNSEFIIIAGSKSAAHRLRISLTFVPRIP 60
           MVLAPPLKAIGRRMVRRSSSVHERNDGVFQKSNSEFIIIAGSKSAAHRLRISLTFVPRIP
Sbjct: 1   MVLAPPLKAIGRRMVRRSSSVHERNDGVFQKSNSEFIIIAGSKSAAHRLRISLTFVPRIP 60

Query: 61  AASFTCGPRSCHSKTPQNFSFSTLRLFHFIGSAEGSHVDCYCYAYVLNDGFSLNFGLDLC 120
           AASFTC PRSCHSKTPQNFSFSTLRLFHFIGSAEGSHVDCYCYAYVLNDGFSLNFGLDLC
Sbjct: 61  AASFTCVPRSCHSKTPQNFSFSTLRLFHFIGSAEGSHVDCYCYAYVLNDGFSLNFGLDLC 120

Query: 121 ESKRG 125
           ESKRG
Sbjct: 121 ESKRG 125

[Close]
BLAST of CsGy6G003595 vs. ExPASy TrEMBL
Match: A0A5A7SUN7 (eIF-2-alpha kinase GCN2 isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G00570 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.01e-08
Identity = 32/39 (82.05%), Postives = 32/39 (82.05%), Query Frame = 0 

Query: 14 MVRRSSSVHERNDGVFQKSNSEFIIIAGSKSAAHRLRIS 52
          MV RSS VH RNDGVFQKSNSEF II GSKSA HRLR S
Sbjct: 1  MVLRSSPVHARNDGVFQKSNSEFRIITGSKSAVHRLRSS 39

The following BLAST results are available for this feature:
BLAST of CsGy6G003595 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy6G003595 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46004.12.92e-8599.20hypothetical protein Csa_005256 [Cucumis sativus][more]
KAA0033037.12.08e-0882.05eIF-2-alpha kinase GCN2 isoform X4 [Cucumis melo var. makuwa] >TYK03452.1 eIF-2-... [more]
BLAST of CsGy6G003595 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KB151.42e-8599.20Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G042380 PE=4 SV=1[more]
A0A5A7SUN71.01e-0882.05eIF-2-alpha kinase GCN2 isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
BLAST of CsGy6G003595 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G003595.1CsGy6G003595.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
molecular_function GO:0016301 kinase activity