CsGy6G003080 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G003080
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Copper-binding periplasmic protein
Location	Gy14Chr6: 2465568 .. 2466395 (-)
RNA-Seq Expression	CsGy6G003080
Synteny	CsGy6G003080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAATGGCGATCGATGTTTGCTCTGAGATTTCCACTGTAGGAATCAGTCCCAGAATCTCATTTTCACATGATCTGAATCAAACCGATTTGTTGCCTTCTTCTAATTGTGATCGTGATCGCGATCGTTTGGATTTGAGTCTTCTCGAATCCGATTTCGATTTCTGCATTGGTAACCTTCTTCTCCAAGATCTTTCCTCCGCCGATGAACTCTTCTCCAATGGCAAGATCCTCCCCAAATCCATCCAGCCAAACAGACAACTTCTTAGTAAACCTAATAAATCCCATCGTCTAATTCCTCCGATTCCTCCCGATCCTTCCAGAAACTCAGTCTCCTCCGAGAAGAAGAGCCTTAAAGAGCTTCTATCCGCCAGTTTCGATGGCGATGAGAAACCGCAATCCAAATCCTTTTGGCAGTTCAAGCGAAGCAGTAGTCTCAATTGCGAAAGCTCAAAGAGTAGAGGTTTGATTCGATCCTTGCATTTTCTGTCCAGAAGCAATTCAACTGGTTCGGTTTTGAATCCGAAACAGCAATCGAATTCGAAGGATTGTCAAAGACCGAATTTGCAGAAACAGGGTTCCAGTTCAAGTAGTAGAAGATCATCTTCATCCTCATCTTCATCGTCTTTCTCCAACTCCTATTTTGCAAACACGTGTTCTCAAAAGCCTTCAATGAGGAAGAATTTTGGATGGAACAATGGGAATGGAGTTGGAAGTAGTAGTCCTCTTCTCAATCTCCCTCCACCGTACATTTCCAAAGTAACTGTGAGTTTTTTTGGATTCGGATCTCTGTTCTGTAATGGTAAAACTAAAAAGAAAAAGAAATAA

mRNA sequence

ATGCTAATGGCGATCGATGTTTGCTCTGAGATTTCCACTGTAGGAATCAGTCCCAGAATCTCATTTTCACATGATCTGAATCAAACCGATTTGTTGCCTTCTTCTAATTGTGATCGTGATCGCGATCGTTTGGATTTGAGTCTTCTCGAATCCGATTTCGATTTCTGCATTGGTAACCTTCTTCTCCAAGATCTTTCCTCCGCCGATGAACTCTTCTCCAATGGCAAGATCCTCCCCAAATCCATCCAGCCAAACAGACAACTTCTTAGTAAACCTAATAAATCCCATCGTCTAATTCCTCCGATTCCTCCCGATCCTTCCAGAAACTCAGTCTCCTCCGAGAAGAAGAGCCTTAAAGAGCTTCTATCCGCCAGTTTCGATGGCGATGAGAAACCGCAATCCAAATCCTTTTGGCAGTTCAAGCGAAGCAGTAGTCTCAATTGCGAAAGCTCAAAGAGTAGAGGTTTGATTCGATCCTTGCATTTTCTGTCCAGAAGCAATTCAACTGGTTCGGTTTTGAATCCGAAACAGCAATCGAATTCGAAGGATTGTCAAAGACCGAATTTGCAGAAACAGGGTTCCAGTTCAAGTAGTAGAAGATCATCTTCATCCTCATCTTCATCGTCTTTCTCCAACTCCTATTTTGCAAACACGTGTTCTCAAAAGCCTTCAATGAGGAAGAATTTTGGATGGAACAATGGGAATGGAGTTGGAAGTAGTAGTCCTCTTCTCAATCTCCCTCCACCGTACATTTCCAAAGTAACTGTGAGTTTTTTTGGATTCGGATCTCTGTTCTGTAATGGTAAAACTAAAAAGAAAAAGAAATAA

Coding sequence (CDS)

ATGCTAATGGCGATCGATGTTTGCTCTGAGATTTCCACTGTAGGAATCAGTCCCAGAATCTCATTTTCACATGATCTGAATCAAACCGATTTGTTGCCTTCTTCTAATTGTGATCGTGATCGCGATCGTTTGGATTTGAGTCTTCTCGAATCCGATTTCGATTTCTGCATTGGTAACCTTCTTCTCCAAGATCTTTCCTCCGCCGATGAACTCTTCTCCAATGGCAAGATCCTCCCCAAATCCATCCAGCCAAACAGACAACTTCTTAGTAAACCTAATAAATCCCATCGTCTAATTCCTCCGATTCCTCCCGATCCTTCCAGAAACTCAGTCTCCTCCGAGAAGAAGAGCCTTAAAGAGCTTCTATCCGCCAGTTTCGATGGCGATGAGAAACCGCAATCCAAATCCTTTTGGCAGTTCAAGCGAAGCAGTAGTCTCAATTGCGAAAGCTCAAAGAGTAGAGGTTTGATTCGATCCTTGCATTTTCTGTCCAGAAGCAATTCAACTGGTTCGGTTTTGAATCCGAAACAGCAATCGAATTCGAAGGATTGTCAAAGACCGAATTTGCAGAAACAGGGTTCCAGTTCAAGTAGTAGAAGATCATCTTCATCCTCATCTTCATCGTCTTTCTCCAACTCCTATTTTGCAAACACGTGTTCTCAAAAGCCTTCAATGAGGAAGAATTTTGGATGGAACAATGGGAATGGAGTTGGAAGTAGTAGTCCTCTTCTCAATCTCCCTCCACCGTACATTTCCAAAGTAACTGTGAGTTTTTTTGGATTCGGATCTCTGTTCTGTAATGGTAAAACTAAAAAGAAAAAGAAATAA

Protein sequence

MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNLLLQDLSSADELFSNGKILPKSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKKSLKELLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSNSKDCQRPNLQKQGSSSSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVGSSSPLLNLPPPYISKVTVSFFGFGSLFCNGKTKKKKK*

Homology

[Close]

BLAST of CsGy6G003080 vs. NCBI nr
Match: XP_004151494.1 (uncharacterized protein LOC101215559 [Cucumis sativus])

HSP 1 Score: 517 bits (1332), Expect = 1.94e-184
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60
           MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL
Sbjct: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60

Query: 61  LLQDLSSADELFSNGKILPKSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKKSLKE 120
           LLQDLSSADELFSNGKILPKSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKKSLKE
Sbjct: 61  LLQDLSSADELFSNGKILPKSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKKSLKE 120

Query: 121 LLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSN 180
           LLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSN
Sbjct: 121 LLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSN 180

Query: 181 SKDCQRPNLQKQGSSSSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVGSS 240
           SKDCQRPNLQKQGSSSSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVGSS
Sbjct: 181 SKDCQRPNLQKQGSSSSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVGSS 240

Query: 241 SPLLNLPPPYISKVTVSFFGFGSLFCNGKTKKKKK 275
           SPLLNLPPPYISKVTVSFFGFGSLFCNGKTKKKKK
Sbjct: 241 SPLLNLPPPYISKVTVSFFGFGSLFCNGKTKKKKK 275

[Close]

BLAST of CsGy6G003080 vs. NCBI nr
Match: XP_008445637.1 (PREDICTED: uncharacterized protein LOC103488594 [Cucumis melo])

HSP 1 Score: 489 bits (1259), Expect = 2.78e-173
Identity = 266/277 (96.03%), Postives = 270/277 (97.47%), Query Frame = 0


Query: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60
           MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL
Sbjct: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60

Query: 61  LLQDLSSADELFSNGKILPKSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKKSLKE 120
           LLQDLSSADELFSNGKILPKSI+PNRQ+LSKPN+SHRLIPPIPPDPSRNSVSSEKKSLKE
Sbjct: 61  LLQDLSSADELFSNGKILPKSIEPNRQVLSKPNQSHRLIPPIPPDPSRNSVSSEKKSLKE 120

Query: 121 LLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSN 180
           LLSASFDG+EK QSKSFWQFKRSSSLNCESSKSR LIRSLHFLSRSNSTGSVLNPKQQSN
Sbjct: 121 LLSASFDGEEKQQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSVLNPKQQSN 180

Query: 181 SKDCQRPNLQKQGSSSSSRRSSSSSSSS-SFSNSYFANTCSQKPSMRKNFGWNNGNGVG- 240
           SKDCQRPNLQKQ S SSSRRSSSSSSSS SFSNSYFANTCSQK SMRKNFGWNNGNGVG 
Sbjct: 181 SKDCQRPNLQKQASISSSRRSSSSSSSSTSFSNSYFANTCSQKHSMRKNFGWNNGNGVGI 240

Query: 241 SSSPLLNLPPPYISKVTVSFFGFGSLFCNGKTKKKKK 275
           SSSPLLNLPPPYISKVTVSFFGFGSLFCNGKTKKKKK
Sbjct: 241 SSSPLLNLPPPYISKVTVSFFGFGSLFCNGKTKKKKK 277

[Close]

BLAST of CsGy6G003080 vs. NCBI nr
Match: KGN45940.2 (hypothetical protein Csa_005269 [Cucumis sativus])

HSP 1 Score: 464 bits (1193), Expect = 8.09e-163
Identity = 253/273 (92.67%), Postives = 257/273 (94.14%), Query Frame = 0


Query: 3   MAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNLLL 62
           MAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNLLL
Sbjct: 1   MAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNLLL 60

Query: 63  QDLSSADELFSNGKILPKSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKKSLKELL 122
           QDLSSADELFSNGKILPKSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKKSLKELL
Sbjct: 61  QDLSSADELFSNGKILPKSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKKSLKELL 120

Query: 123 SASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSNSK 182
           SASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSNSK
Sbjct: 121 SASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSNSK 180

Query: 183 DCQRPNLQKQGSSSSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVGSSSP 242
           DCQRPNLQKQGSSSSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVGSSSP
Sbjct: 181 DCQRPNLQKQGSSSSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVGSSSP 240

Query: 243 LLNLPPPY----ISKVTVSFFGFGSLFCNGKTK 271
           LLNLPPP+    ISK       F   + + KT+
Sbjct: 241 LLNLPPPFKHNIISKGDAYTLVFKKAYEDNKTR 273

[Close]

BLAST of CsGy6G003080 vs. NCBI nr
Match: KAA0043504.1 (uncharacterized protein E6C27_scaffold43056G00050 [Cucumis melo var. makuwa] >TYK01135.1 uncharacterized protein E5676_scaffold109G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 449 bits (1156), Expect = 1.42e-157
Identity = 246/258 (95.35%), Postives = 251/258 (97.29%), Query Frame = 0


Query: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60
           MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL
Sbjct: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60

Query: 61  LLQDLSSADELFSNGKILPKSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKKSLKE 120
           LLQDLSSADELFSNGKILPKSI+PNRQ+LSKPN+SHRLIPPIPPDPSRNSVSSEKKSLKE
Sbjct: 61  LLQDLSSADELFSNGKILPKSIEPNRQVLSKPNQSHRLIPPIPPDPSRNSVSSEKKSLKE 120

Query: 121 LLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSN 180
           LLSASFDG+EK QSKSFWQFKRSSSLNCESSKSR LIRSLHFLSRSNSTGSVLNPKQQSN
Sbjct: 121 LLSASFDGEEKQQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSVLNPKQQSN 180

Query: 181 SKDCQRPNLQKQGSSSSSRRSSSSSSSS-SFSNSYFANTCSQKPSMRKNFGWNNGNGVG- 240
           SKDCQRPNLQKQ S SSSRRSSSSSSSS SFSNSYFANTCSQK SMRKNFGWNNGNGVG 
Sbjct: 181 SKDCQRPNLQKQASISSSRRSSSSSSSSTSFSNSYFANTCSQKHSMRKNFGWNNGNGVGI 240

Query: 241 SSSPLLNLPPPYISKVTV 256
           SSSPLLNLPPPYISKVT+
Sbjct: 241 SSSPLLNLPPPYISKVTI 258

[Close]

BLAST of CsGy6G003080 vs. NCBI nr
Match: XP_038886056.1 (uncharacterized protein LOC120076333 [Benincasa hispida])

HSP 1 Score: 428 bits (1100), Expect = 3.22e-149
Identity = 243/273 (89.01%), Postives = 251/273 (91.94%), Query Frame = 0


Query: 3   MAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNLLL 62
           MAIDVCSEISTVGISPRISFSHDLNQTD LPSSN DRDR  LDLSLLESDFDFCIGNLL 
Sbjct: 1   MAIDVCSEISTVGISPRISFSHDLNQTDSLPSSNFDRDR--LDLSLLESDFDFCIGNLLR 60

Query: 63  QDLSSADELFSNGKILPKSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKKSLKELL 122
           QDLSSADELFSNGKILPKSI+PNR++L KPN+S  LIPPIPPDPSRNSVSSEKKSLKELL
Sbjct: 61  QDLSSADELFSNGKILPKSIEPNREIL-KPNQSPPLIPPIPPDPSRNSVSSEKKSLKELL 120

Query: 123 SASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSNSK 182
           SASFDGDEKPQSKSFWQFKRSSSLNCESSKSR LIRSLHFLSRSNSTGS LNPKQQS SK
Sbjct: 121 SASFDGDEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSTLNPKQQSVSK 180

Query: 183 DCQRPNLQKQGSSSSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVGSSSP 242
           +  RPNLQKQ S SSSRRS+SSSSSSSFSNSYF N+CSQKPS+RKN G NNGNGV   SP
Sbjct: 181 E--RPNLQKQASISSSRRSTSSSSSSSFSNSYFVNSCSQKPSIRKNLGPNNGNGV-RISP 240

Query: 243 LLNLPPPYISKVTVSFFGFGSLFCNGKTKKKKK 275
           LLNLPPPYISKVTVSFFGFGSLFCNGK KKKKK
Sbjct: 241 LLNLPPPYISKVTVSFFGFGSLFCNGKIKKKKK 267

[Close]

BLAST of CsGy6G003080 vs. ExPASy TrEMBL
Match: A0A0A0KAS8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G027440 PE=4 SV=1)

HSP 1 Score: 517 bits (1332), Expect = 9.37e-185
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60
           MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL
Sbjct: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60

Query: 61  LLQDLSSADELFSNGKILPKSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKKSLKE 120
           LLQDLSSADELFSNGKILPKSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKKSLKE
Sbjct: 61  LLQDLSSADELFSNGKILPKSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKKSLKE 120

Query: 121 LLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSN 180
           LLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSN
Sbjct: 121 LLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSN 180

Query: 181 SKDCQRPNLQKQGSSSSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVGSS 240
           SKDCQRPNLQKQGSSSSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVGSS
Sbjct: 181 SKDCQRPNLQKQGSSSSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVGSS 240

Query: 241 SPLLNLPPPYISKVTVSFFGFGSLFCNGKTKKKKK 275
           SPLLNLPPPYISKVTVSFFGFGSLFCNGKTKKKKK
Sbjct: 241 SPLLNLPPPYISKVTVSFFGFGSLFCNGKTKKKKK 275

[Close]

BLAST of CsGy6G003080 vs. ExPASy TrEMBL
Match: A0A1S3BE16 (uncharacterized protein LOC103488594 OS=Cucumis melo OX=3656 GN=LOC103488594 PE=4 SV=1)

HSP 1 Score: 489 bits (1259), Expect = 1.35e-173
Identity = 266/277 (96.03%), Postives = 270/277 (97.47%), Query Frame = 0


Query: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60
           MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL
Sbjct: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60

Query: 61  LLQDLSSADELFSNGKILPKSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKKSLKE 120
           LLQDLSSADELFSNGKILPKSI+PNRQ+LSKPN+SHRLIPPIPPDPSRNSVSSEKKSLKE
Sbjct: 61  LLQDLSSADELFSNGKILPKSIEPNRQVLSKPNQSHRLIPPIPPDPSRNSVSSEKKSLKE 120

Query: 121 LLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSN 180
           LLSASFDG+EK QSKSFWQFKRSSSLNCESSKSR LIRSLHFLSRSNSTGSVLNPKQQSN
Sbjct: 121 LLSASFDGEEKQQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSVLNPKQQSN 180

Query: 181 SKDCQRPNLQKQGSSSSSRRSSSSSSSS-SFSNSYFANTCSQKPSMRKNFGWNNGNGVG- 240
           SKDCQRPNLQKQ S SSSRRSSSSSSSS SFSNSYFANTCSQK SMRKNFGWNNGNGVG 
Sbjct: 181 SKDCQRPNLQKQASISSSRRSSSSSSSSTSFSNSYFANTCSQKHSMRKNFGWNNGNGVGI 240

Query: 241 SSSPLLNLPPPYISKVTVSFFGFGSLFCNGKTKKKKK 275
           SSSPLLNLPPPYISKVTVSFFGFGSLFCNGKTKKKKK
Sbjct: 241 SSSPLLNLPPPYISKVTVSFFGFGSLFCNGKTKKKKK 277

[Close]

BLAST of CsGy6G003080 vs. ExPASy TrEMBL
Match: A0A5D3BPP8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00020 PE=4 SV=1)

HSP 1 Score: 449 bits (1156), Expect = 6.86e-158
Identity = 246/258 (95.35%), Postives = 251/258 (97.29%), Query Frame = 0


Query: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60
           MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL
Sbjct: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60

Query: 61  LLQDLSSADELFSNGKILPKSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKKSLKE 120
           LLQDLSSADELFSNGKILPKSI+PNRQ+LSKPN+SHRLIPPIPPDPSRNSVSSEKKSLKE
Sbjct: 61  LLQDLSSADELFSNGKILPKSIEPNRQVLSKPNQSHRLIPPIPPDPSRNSVSSEKKSLKE 120

Query: 121 LLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQSN 180
           LLSASFDG+EK QSKSFWQFKRSSSLNCESSKSR LIRSLHFLSRSNSTGSVLNPKQQSN
Sbjct: 121 LLSASFDGEEKQQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSVLNPKQQSN 180

Query: 181 SKDCQRPNLQKQGSSSSSRRSSSSSSSS-SFSNSYFANTCSQKPSMRKNFGWNNGNGVG- 240
           SKDCQRPNLQKQ S SSSRRSSSSSSSS SFSNSYFANTCSQK SMRKNFGWNNGNGVG 
Sbjct: 181 SKDCQRPNLQKQASISSSRRSSSSSSSSTSFSNSYFANTCSQKHSMRKNFGWNNGNGVGI 240

Query: 241 SSSPLLNLPPPYISKVTV 256
           SSSPLLNLPPPYISKVT+
Sbjct: 241 SSSPLLNLPPPYISKVTI 258

[Close]

BLAST of CsGy6G003080 vs. ExPASy TrEMBL
Match: A0A6J1FKX8 (uncharacterized protein LOC111445167 OS=Cucurbita moschata OX=3662 GN=LOC111445167 PE=4 SV=1)

HSP 1 Score: 389 bits (998), Expect = 6.06e-134
Identity = 229/277 (82.67%), Postives = 243/277 (87.73%), Query Frame = 0


Query: 3   MAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNLLL 62
           MAI+VCSEISTVGISPRISFSHDLNQ DLLPSS+ D +R+RLDL+LLESDFDFCIGNLL 
Sbjct: 1   MAIEVCSEISTVGISPRISFSHDLNQADLLPSSS-DCNRERLDLTLLESDFDFCIGNLLR 60

Query: 63  QDLSSADELFSNGKILP----KSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKKSL 122
           QDLSSADELFSNGKILP    KSI+PNR++L KP +S    PP+PPDP+RNSVSSEKKSL
Sbjct: 61  QDLSSADELFSNGKILPVEIKKSIEPNREVL-KPIQSPP-PPPVPPDPARNSVSSEKKSL 120

Query: 123 KELLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQ 182
           KELLSASFD DEKPQSKSFWQFKRSSSLNCESSKSR LIRSLHFLSRSNSTGS LNPK Q
Sbjct: 121 KELLSASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSALNPKSQ 180

Query: 183 SNSKDCQRPNLQKQGSSSSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVG 242
           S SKD QRPNLQKQ S SSSRRSS+S S+S+  NSYFAN  SQKPSMRKN G NNGNGV 
Sbjct: 181 STSKDPQRPNLQKQPSISSSRRSSTSISTSA--NSYFANLSSQKPSMRKNSGPNNGNGV- 240

Query: 243 SSSPLLNLPPPYISKVTVSFFGFGSLFCNGKTKKKKK 275
             SP LNLPPPYISKVTVSFFGFGSLFCNGK KKKKK
Sbjct: 241 RISPFLNLPPPYISKVTVSFFGFGSLFCNGKIKKKKK 271

[Close]

BLAST of CsGy6G003080 vs. ExPASy TrEMBL
Match: A0A6J1I4A0 (uncharacterized protein LOC111470497 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470497 PE=4 SV=1)

HSP 1 Score: 378 bits (970), Expect = 1.27e-129
Identity = 223/285 (78.25%), Postives = 238/285 (83.51%), Query Frame = 0


Query: 3   MAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNLLL 62
           MAI+VCSEIS+VGISPRISFSHDLNQ D LPSS+ D +R RLDLSLLESDFDFCIGNLLL
Sbjct: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSS-DCNRGRLDLSLLESDFDFCIGNLLL 60

Query: 63  QDLSSADELFSNGKILP----KSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKKSL 122
           QDLSSADELF NGKILP    KSI+PNR++ SKPN+S    PPIPPDP R+SVSSEKKSL
Sbjct: 61  QDLSSADELFCNGKILPVEIKKSIEPNREV-SKPNQS---TPPIPPDPPRSSVSSEKKSL 120

Query: 123 KELLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQQ 182
           KELLSASFD +EKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGS LN KQQ
Sbjct: 121 KELLSASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKQQ 180

Query: 183 SNS--------KDCQRPNLQKQGSSSSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFG 242
           S S        KD + P+LQKQ S SS +     SS SS SNSYFAN+CSQKPS R+NFG
Sbjct: 181 SQSQSQSQSQSKDSRTPSLQKQPSISSRK-----SSVSSCSNSYFANSCSQKPSTRRNFG 240

Query: 243 WNNGNGVGSSSPLLNLPPPYISKVTVSFFGFGSLFCNGKTKKKKK 275
            NNGNGV   SPLLNLPPPYISKVTVSFFGFGSLFCNGK KKK K
Sbjct: 241 ANNGNGVRIMSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 275

[Close]

BLAST of CsGy6G003080 vs. TAIR 10
Match: AT1G68330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48780.1); Has 155 Blast hits to 147 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 3; Plants - 126; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 136.7 bits (343), Expect = 2.8e-32
Identity = 136/294 (46.26%), Postives = 161/294 (54.76%), Query Frame = 0


Query: 3   MAIDV-CSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLE--SDFDFCIG- 62
           MAIDV CSE S  GISPRISFS+DL+ T        D    RLD +LL+  S+FDFC G 
Sbjct: 1   MAIDVCCSEASGSGISPRISFSYDLDST--------DDGEVRLDSTLLDSGSEFDFCFGS 60

Query: 63  NLLLQDLSSADELFSNGKILPKSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSS----- 122
           +  +Q++S ADELFS GKILP  I+    L   P      +P      S +S SS     
Sbjct: 61  SCSVQEVSPADELFSEGKILPVQIKKEESL---PQTVTFRVPRSASLSSSSSSSSSSSSS 120

Query: 123 -----EKKSLKE-LLSASFDGDEKPQSKSFWQFKRSSSLNCESSK-SRGLIRSLHFLSRS 182
                +K  LKE LL+   D ++KP+   F QFKRS SLN + S+ S+GLIRS HFLSRS
Sbjct: 121 SRAPEKKMRLKELLLNPESDFEDKPRG-LFLQFKRSISLNYDKSRNSKGLIRSFHFLSRS 180

Query: 183 NSTGSVLNPKQQSNSKDCQRP----NLQKQGSSSSSRRSSSSSSSSSFSNSYFANTCSQK 242
           NST    NP      K+   P    NL K       RRSSS SSSS           S+K
Sbjct: 181 NSTP---NPNLDLLPKETHHPHKTHNLPKH--KPPLRRSSSLSSSS-------VPFYSKK 240

Query: 243 PSMRKNFGWNNGNGVGSSSPLLNLPPP-YISKVTVSFFGFGSLFCNGKTKKKKK 276
           P  R +FG  NGNG    SP+LN PPP +IS V   FF  GSL CNGKT  K K
Sbjct: 241 PLGRNSFG--NGNGGVRVSPVLNFPPPAFISNVADGFFSIGSL-CNGKTNTKTK 267

[Close]

BLAST of CsGy6G003080 vs. TAIR 10
Match: AT1G67050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38320.1); Has 617 Blast hits to 318 proteins in 80 species: Archae - 0; Bacteria - 16; Metazoa - 141; Fungi - 62; Plants - 128; Viruses - 2; Other Eukaryotes - 268 (source: NCBI BLink). )

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-26
Identity = 113/287 (39.37%), Postives = 151/287 (52.61%), Query Frame = 0


Query: 3   MAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLES--DFDFCI--- 62
           MA+D+ SE S   +SPRISFS D  Q+D +P             S L S  DFDFCI   
Sbjct: 1   MAVDLLSENS--NMSPRISFSRDFCQSDAIPIEKRPLRSSNSKPSSLNSSIDFDFCIPGG 60

Query: 63  ---GNLLLQDLSSADELFSNGKILPKSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSE 122
              G    Q   SADELFSNGKILP  I+       +P K      P+   P       +
Sbjct: 61  VNSGESFDQGSWSADELFSNGKILPTEIKKK----PEPGKKEPEPKPVKSKPDSRKQRKQ 120

Query: 123 KKSLKELLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLN 182
               ++        +EK  +KSFW FKRSSSLNC S+  R L   L  L+RSNSTGS  +
Sbjct: 121 PNEEQQEDDVIITTEEKTNTKSFWGFKRSSSLNCGSTYGRSLC-PLPLLNRSNSTGSTSS 180

Query: 183 PKQQSNS-KDCQRPNLQKQGSSSSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFG--- 242
            ++QS+S K  +   LQ+     SS  SSSSS+SSS SN+ F+     KP ++K++G   
Sbjct: 181 KQKQSSSRKHNEHVKLQQ-----SSSLSSSSSASSSLSNNGFS-----KPPLKKSYGGYS 240

Query: 243 -WNNGNGVGSSSPLLNLPPPYISKVTVSFFGFGSLFC-NGKTKKKKK 276
             ++G G    SP++N+ P      + + FGFGS+F  NG+ K KK+
Sbjct: 241 YGSHGGGGIRVSPVINVVP------SGNLFGFGSMFSGNGRDKNKKR 264

[Close]

BLAST of CsGy6G003080 vs. TAIR 10
Match: AT3G18300.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48780.1); Has 69 Blast hits to 69 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 80.1 bits (196), Expect = 3.1e-15
Identity = 105/297 (35.35%), Postives = 131/297 (44.11%), Query Frame = 0


Query: 11  ISTVGISPRISFSHDLNQTD------LLPSSNCDRDRDRLDLSLLESDFDFCI-GNLLLQ 70
           I T     R SF+ DL Q+D        PS    RD   LD S   SDF+F I  N    
Sbjct: 2   ICTESNHQRFSFAGDLGQSDKGTPMEQQPSGPVRRDTTLLDSS--NSDFEFHISSNFDPG 61

Query: 71  DLSSADELFSNGKILP--------KSIQPNR-------QLLSKPNKSHRLIP---PIPPD 130
           D S ADE+F++G ILP         S  P R        ++S P  S  L P   P+P  
Sbjct: 62  DSSPADEIFADGMILPVLPFQVTATSTMPKRLYKYELPPIVSAPTLSSYLPPLPLPLPEH 121

Query: 131 PSRNSVSSEKKSLKELLS-ASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLS 190
             + SV   + SL    S A+ D + +  SKSFW FKRSSSLNC+  KS  LI S   L+
Sbjct: 122 SRKYSVKETRGSLNGRGSGANSDSEAEKSSKSFWSFKRSSSLNCDIKKS--LICSFPRLT 181

Query: 191 RSNSTGSVLNPKQQS----NSKDCQRPNLQKQGSSSSSRRSSSSSSSSSFSNSYFANTCS 250
           RSNSTGSV   K++     N    QR  + + G + SS     SS             CS
Sbjct: 182 RSNSTGSVAISKREMLRDINKHSSQRHGVPRPGVNPSSHMRPPSSF-----------CCS 241

Query: 251 QKPSMRKNFGWNNGNGVGSS---SPLLNLPPPYISKVTVSFFGFGSLFCNGKTKKKK 275
                 +     NG G G S   +P++  P P         FG GS+    K KKKK
Sbjct: 242 SYQFRPQKHAGKNGGGRGGSFWIAPVIGGPSP---------FGLGSILRLTKEKKKK 274

[Close]

BLAST of CsGy6G003080 vs. TAIR 10
Match: AT1G48780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18300.1); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 79.7 bits (195), Expect = 4.0e-15
Identity = 102/272 (37.50%), Postives = 126/272 (46.32%), Query Frame = 0


Query: 19  RISFSHDLNQTD------LLPSSNCDRDRDRLDLSLLESDFDFCIGNLL-LQDLSSADEL 78
           RISFS DL Q+D      + PS    RD   LD S   SDF+F I N     D S ADE+
Sbjct: 9   RISFSSDLGQSDKAPPPVIEPSGLIRRDETLLDSS--NSDFEFHISNSFDPGDSSPADEI 68

Query: 79  FSNGKILP-----KSIQPNR-QLLSKPNKSHRLIP-PIPPDPSRNSVSSEKKSLKELLSA 138
           F++G ILP      S  P R      P  +  L P P+ P P      SEK++      A
Sbjct: 69  FADGMILPFHVTAASTVPKRLYKYELPPITSSLSPSPLSPQPLPTK-HSEKETNGRASGA 128

Query: 139 SFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPKQ-QSNSKD 198
           + D + +  SKSFW FKRSSSLNC+  KS  LI S   L+RSNSTGSV N K+      +
Sbjct: 129 NSDSEAEKSSKSFWSFKRSSSLNCDIKKS--LICSFPRLTRSNSTGSVTNSKRAMLRDVN 188

Query: 199 CQRPNLQKQGSSSSSRRSSSSSSSSSFSNSYFANTCSQKPSMRKNFGWNNGNGVGSSSPL 258
             RP                 SS SS  N+Y      QK + +K      G G  S  P+
Sbjct: 189 NHRP-----------------SSRSSCCNAY--QFRPQKHTGKK----GEGGGSFSVIPV 243

Query: 259 LNLPPPYISKVTVSFFGFGSLFCNGKTKKKKK 276
           LN P         S FG GS+  +  +K K K
Sbjct: 249 LNGP---------STFGLGSILRHSNSKDKTK 243

The following BLAST results are available for this feature:

BLAST of CsGy6G003080 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G003080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151494.1	1.94e-184	100.00	uncharacterized protein LOC101215559 [Cucumis sativus]	[more]
XP_008445637.1	2.78e-173	96.03	PREDICTED: uncharacterized protein LOC103488594 [Cucumis melo]	[more]
KGN45940.2	8.09e-163	92.67	hypothetical protein Csa_005269 [Cucumis sativus]	[more]
KAA0043504.1	1.42e-157	95.35	uncharacterized protein E6C27_scaffold43056G00050 [Cucumis melo var. makuwa] >TY...	[more]
XP_038886056.1	3.22e-149	89.01	uncharacterized protein LOC120076333 [Benincasa hispida]	[more]

BLAST of CsGy6G003080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAS8	9.37e-185	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G027440 PE=4 SV=1	[more]
A0A1S3BE16	1.35e-173	96.03	uncharacterized protein LOC103488594 OS=Cucumis melo OX=3656 GN=LOC103488594 PE=...	[more]
A0A5D3BPP8	6.86e-158	95.35	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1FKX8	6.06e-134	82.67	uncharacterized protein LOC111445167 OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]
A0A6J1I4A0	1.27e-129	78.25	uncharacterized protein LOC111470497 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CsGy6G003080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68330.1	2.8e-32	46.26	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G67050.1	1.3e-26	39.37	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G18300.1	3.1e-15	35.35	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G48780.1	4.0e-15	37.50	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..114
None	No IPR available	PANTHER	PTHR31722	OS06G0675200 PROTEIN	coord: 3..275
None	No IPR available	PANTHER	PTHR31722:SF33	COPPER-BINDING PERIPLASMIC PROTEIN	coord: 3..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G003080.1	CsGy6G003080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071704	organic substance metabolic process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0016985	mannan endo-1,4-beta-mannosidase activity