CsGy6G002620 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G002620
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description40S ribosomal protein SA
LocationGy14Chr6: 1983982 .. 1986689 (-)
RNA-Seq ExpressionCsGy6G002620
SyntenyCsGy6G002620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAGGAAGAAGGAAGAAGGAAGAAGGAAGAAGGAATTTATTAACTTAATTTATAGTCGAGGGCATTATAGTAATTAGCAATCTAGGGTTTTTATGCATAAATATTAGTCTTCCTCTTAACCTTCTTCAGTTGCAGCCGCCGAAGAGCTCCAAATCCTCTTTTCATTCACTTCATCGATTCCCAGATTCCGCCATGGCGACCGGAGCTGCACCGCCTCGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCTGCCGAAGTTCATCTTGGCACAAAAAACTGCGATTTTCAAATGGAACGATATGTTTTTAAGCGCCGAAATGATGGTATGTTTCCTTTAGATCTTCCTTGGTTTGTTGCTCCAAGTTCTGTGTTCTGTTTTTTCCTTTTTATCGGCGATTTCGCTTTGACTGATATTTAAAGTTCTAATGAGCGGGTTGTTATTGTTCTTAAGTTTCTTTTTCAAGAATTTCTCGACTTTATTGTGATTGGAATCATATATATTTTAGTTCGGAAGTTCCAGTCTTTGGCTATTCTTCTGTTTATCTCTTTAAAATTTTCTTCATTTTCTTTGGATTTTTTCTCCAAATTTTCAGAACAGCATTAAGTACTTTGATGCTGTTTTGAGTTTTGTCGCAGAATGATGATTAACACGTTTCGAATGCTTTGCTTAAAGGGAGGGCTCAATGGGGTTTGTCTATATAATGTGTTGATGTTAGCTTATTTGAATTGTTGAGTTATGGTTGTGTGTGGTTTTTTTTATTTATAAAAAGTATTACTTTGTCATTAGGAATCTACATCATTAACCTTGGGAAAACATGGGAGAAACTTCAGCTGGCTGCAAGAGTTATTGTGGGTATTGAGAATCCTCAAGATATCATTGTTCAGTCTGCTCGACCCTATGGTCAGAGGGCTGTTTTGAAGTTCGCTCAGCACACTGGTGCTCATGCTATTGCTGGGAGGCACACTCCTGGAACATTCACCAACCAGCTTCAGACATCATTCAACGAGCCACGCCTGCTTATACTTACTGATCCTAGAACTGATCATCAGGTGTTTAAATTTAGAAATCAAGAAAAGTTCATGGTTTTAAATTTAGCTCCAAGAAAAATGGTGGCTTTATATTGTCAATTATGATACCGTTCATGCCTGTTCCATTGATTTATTTGTGTTTGGATTCACTTGATGCTTTTGTTTATTGACGTAGCCTTGTTGATTCTTACTTGCAGCCAATTAAGGAAGCTGCACTTGGTAACATTCCCACAATAGCCTTTTGTGACACTGATTCTCCAATGCGGTATGTTGATATTGGAATCCCGGCCAACAACAAGGGAAAACATAGCATAGGATGTTTGTTCTGGCTTTTGGCAAGGATGGTTCTACAAATGCGTGGGACAATTCGTGCTGGCCACAAATGGGATGTGATGGTAAAAGATCTTGTTGCAATTTTCTATTGGTACTTTAGAAACAACATTTGGACTTAGTTTTCAATTAACAATTATTTGTGGGAACGGTTTTCCTTGCATAGGTGGATTTGTTTTTCTATCGTGAACCTGAGGAGGCTAAGGAGCCAGAAGAGGAAGAGGCTCTTCCACCCGCAGATTTTGGCATTGCTGACTATAGTGCTGCTCCACTTACCTCAGACCAATGGACTTCACAAATTCCCGATGCCCAATGGGGTGCTGCAGATGCAATTCCTCCTCCTGCGCCTGTTGTACCTGCTTCCGGTGCTGAATGGGCTCCAGAGCCAGGTTGAATATAAGCTTTTGTTTTTAATTCTTTATTTGAATAGAGCTGTCTGCCTTTAGTATGCTTATTCACGTAAACATGTTTTGGTCTCTTTGGAGAACTGTTTCCTCTTAGGCTGGATAAGTCATTTTGTCTGCTTTCCGTATGAAGTTTCTGATTATTCTCTACCTACCTAATACTGCCAAACAATCCCGTTCTTTGCATTACATTGTTTTTGCATCTTTAGACATCCTTTACCAGGAGTTGTAAGATGCTTCCTACATGTATTTGTACGCACTCTCTCACCATTGTTTTCCTTTGTTTCCAGTTGCTTTGGCAGCAGATGGATGGGATGCCGCAGCAGCACCTCCGCCGCCGCCAGCAGTTTCTGCTGAGGGAACGGCACCTTCCTCCGCCAGTTGGTTTTGAGAGAGAAAAAGTTTAAAGTTCCGTACCGAATTGTACTCTAATGGATTAATTATTATGAGTTTTCTTGTTTATTTAGGAATGACATCGGTCCTTTTTGGTTGGAAAATTGATTTCTTTTTTTATAGTCCAGTTTTAGATTTTAAGATTGAATTTTCCGACTTCCATTACATATCTTAAGTCCCAACAAACAATATATTAATTTTGGATGGCTAAAGGTGGCATGTTTTCTTTGAAAGTTTTGGTGAAGTGAGCGTAACAACTAGAGTCGAGTTAATAGTGGTTTAATCTTTTACGGGAATATCTGAACCTCAATATTTGATGTGTTTTGTGTTGTACTGATAATGTTAGAGATGTTCTATCAATGGGATGGTGCCGTGGCATGAACATCAGTTCACTTAAATGATATTTTTTCATAAATAATGCATAAAAGTATATTCTATTAATTTGGCTTTTTATTTTAAAATATAGAAATCACAAATATGAAAAGTTATATATATGAAAAATTATTGTAGTTTTTTTTCCAATATCTTCAAACTCACCA

mRNA sequence

AAGAAGGAAGAAGGAAGAAGGAAGAAGGAAGAAGGAATTTATTAACTTAATTTATAGTCGAGGGCATTATAGTAATTAGCAATCTAGGGTTTTTATGCATAAATATTAGTCTTCCTCTTAACCTTCTTCAGTTGCAGCCGCCGAAGAGCTCCAAATCCTCTTTTCATTCACTTCATCGATTCCCAGATTCCGCCATGGCGACCGGAGCTGCACCGCCTCGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCTGCCGAAGTTCATCTTGGCACAAAAAACTGCGATTTTCAAATGGAACGATATGTTTTTAAGCGCCGAAATGATGGAATCTACATCATTAACCTTGGGAAAACATGGGAGAAACTTCAGCTGGCTGCAAGAGTTATTGTGGGTATTGAGAATCCTCAAGATATCATTGTTCAGTCTGCTCGACCCTATGGTCAGAGGGCTGTTTTGAAGTTCGCTCAGCACACTGGTGCTCATGCTATTGCTGGGAGGCACACTCCTGGAACATTCACCAACCAGCTTCAGACATCATTCAACGAGCCACGCCTGCTTATACTTACTGATCCTAGAACTGATCATCAGCCAATTAAGGAAGCTGCACTTGGTAACATTCCCACAATAGCCTTTTGTGACACTGATTCTCCAATGCGGTATGTTGATATTGGAATCCCGGCCAACAACAAGGGAAAACATAGCATAGGATGTTTGTTCTGGCTTTTGGCAAGGATGGTTCTACAAATGCGTGGGACAATTCGTGCTGGCCACAAATGGGATGTGATGGTGGATTTGTTTTTCTATCGTGAACCTGAGGAGGCTAAGGAGCCAGAAGAGGAAGAGGCTCTTCCACCCGCAGATTTTGGCATTGCTGACTATAGTGCTGCTCCACTTACCTCAGACCAATGGACTTCACAAATTCCCGATGCCCAATGGGGTGCTGCAGATGCAATTCCTCCTCCTGCGCCTGTTGTACCTGCTTCCGGTGCTGAATGGGCTCCAGAGCCAGTTGCTTTGGCAGCAGATGGATGGGATGCCGCAGCAGCACCTCCGCCGCCGCCAGCAGTTTCTGCTGAGGGAACGGCACCTTCCTCCGCCAGTTGGTTTTGAGAGAGAAAAAGTTTAAAGTTCCGTACCGAATTGTACTCTAATGGATTAATTATTATGAGTTTTCTTGTTTATTTAGGAATGACATCGGTCCTTTTTGGTTGGAAAATTGATTTCTTTTTTTATAGTCCAGTTTTAGATTTTAAGATTGAATTTTCCGACTTCCATTACATATCTTAAGTCCCAACAAACAATATATTAATTTTGGATGGCTAAAGGTGGCATGTTTTCTTTGAAAGTTTTGGTGAAGTGAGCGTAACAACTAGAGTCGAGTTAATAGTGGTTTAATCTTTTACGGGAATATCTGAACCTCAATATTTGATGTGTTTTGTGTTGTACTGATAATGTTAGAGATGTTCTATCAATGGGATGGTGCCGTGGCATGAACATCAGTTCACTTAAATGATATTTTTTCATAAATAATGCATAAAAGTATATTCTATTAATTTGGCTTTTTATTTTAAAATATAGAAATCACAAATATGAAAAGTTATATATATGAAAAATTATTGTAGTTTTTTTTCCAATATCTTCAAACTCACCA

Coding sequence (CDS)

ATGGCGACCGGAGCTGCACCGCCTCGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCTGCCGAAGTTCATCTTGGCACAAAAAACTGCGATTTTCAAATGGAACGATATGTTTTTAAGCGCCGAAATGATGGAATCTACATCATTAACCTTGGGAAAACATGGGAGAAACTTCAGCTGGCTGCAAGAGTTATTGTGGGTATTGAGAATCCTCAAGATATCATTGTTCAGTCTGCTCGACCCTATGGTCAGAGGGCTGTTTTGAAGTTCGCTCAGCACACTGGTGCTCATGCTATTGCTGGGAGGCACACTCCTGGAACATTCACCAACCAGCTTCAGACATCATTCAACGAGCCACGCCTGCTTATACTTACTGATCCTAGAACTGATCATCAGCCAATTAAGGAAGCTGCACTTGGTAACATTCCCACAATAGCCTTTTGTGACACTGATTCTCCAATGCGGTATGTTGATATTGGAATCCCGGCCAACAACAAGGGAAAACATAGCATAGGATGTTTGTTCTGGCTTTTGGCAAGGATGGTTCTACAAATGCGTGGGACAATTCGTGCTGGCCACAAATGGGATGTGATGGTGGATTTGTTTTTCTATCGTGAACCTGAGGAGGCTAAGGAGCCAGAAGAGGAAGAGGCTCTTCCACCCGCAGATTTTGGCATTGCTGACTATAGTGCTGCTCCACTTACCTCAGACCAATGGACTTCACAAATTCCCGATGCCCAATGGGGTGCTGCAGATGCAATTCCTCCTCCTGCGCCTGTTGTACCTGCTTCCGGTGCTGAATGGGCTCCAGAGCCAGTTGCTTTGGCAGCAGATGGATGGGATGCCGCAGCAGCACCTCCGCCGCCGCCAGCAGTTTCTGCTGAGGGAACGGCACCTTCCTCCGCCAGTTGGTTTTGA

Protein sequence

MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSDQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGTAPSSASWF*
Homology
[Close]
BLAST of CsGy6G002620 vs. ExPASy Swiss-Prot
Match: O22518 (40S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 2.2e-128
Identity = 237/292 (81.16%), Postives = 250/292 (85.62%), Query Frame = 0 

Query: 5   AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 64
           AAPPRQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGKTWEKLQLA
Sbjct: 9   AAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQLA 68

Query: 65  ARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 124
           ARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+EPRL
Sbjct: 69  ARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRL 128

Query: 125 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 184
           LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 129 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 188

Query: 185 VLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSD-QWT 244
           VLQMRGTIR G KWDVMVDLFFYREPEEAK+ EEEEA P  D+ I D++A  + +D QW 
Sbjct: 189 VLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEEA-PAVDYAITDFNAGAIAADGQWP 248

Query: 245 SQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAV 296
             I D  W  +DA+P P P VP  G  W     A AA G D   A PPP  +
Sbjct: 249 GTI-DQSW--SDAVPQPIPAVP--GVNWGAPAEAPAAAGGDWGEAVPPPQQI 294

[Close]
BLAST of CsGy6G002620 vs. ExPASy Swiss-Prot
Match: O80377 (40S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 1.1e-127
Identity = 241/304 (79.28%), Postives = 259/304 (85.20%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MA+GA   R+LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MASGA---RELSTMEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           L LAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+
Sbjct: 61  LMLAARVIVSIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPL-TS 240
           LARMVLQMRG I  GHKW+VMVDLFFYREPEE K+ EEE+ LP  D+ +ADY+AAP+  +
Sbjct: 181 LARMVLQMRGVISQGHKWEVMVDLFFYREPEETKDQEEED-LPVGDY-VADYAAAPIGGA 240

Query: 241 DQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEG 300
           DQW + IPDAQWG  D + P    VPA    W  +   +A DGWDAAAAPP P AV  + 
Sbjct: 241 DQWNA-IPDAQWG-GDVVQPANSAVPA--GTWT-DAGPIAGDGWDAAAAPPVPGAVGLDV 294

Query: 301 TAPS 304
            AP+
Sbjct: 301 PAPT 294

[Close]
BLAST of CsGy6G002620 vs. ExPASy Swiss-Prot
Match: A5BUU4 (40S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 1.5e-127
Identity = 242/315 (76.83%), Postives = 254/315 (80.63%), Query Frame = 0 

Query: 5   AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 64
           A P R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLA
Sbjct: 2   ATPTRALSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLA 61

Query: 65  ARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 124
           ARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+EPRL
Sbjct: 62  ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRL 121

Query: 125 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 184
           LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 122 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 181

Query: 185 VLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAP---LTSDQ 244
           VLQMR TI  GHKWDVMVDLFFYREPEE KE E +E +   D+GI DY A     L    
Sbjct: 182 VLQMRRTIAPGHKWDVMVDLFFYREPEEPKEQEGDEVVAAPDYGITDYQATALGGLGGGD 241

Query: 245 WTSQIPDA-QWGAADAIPPPAPVVPASGAEWA-----PEPVALAADGWDAAAAPP---PP 304
           W + I DA QWGA   +P  AP+    G+ W      P  V +A DGWDAAAAPP   PP
Sbjct: 242 WGAPITDAPQWGA--DVPAVAPIPAVPGSNWGDAAPMPSAVPIATDGWDAAAAPPVAVPP 301

Query: 305 PAVSAEGTAPSSASW 308
           P V  EG  P  A W
Sbjct: 302 PVV--EG-VPPPAGW 311

[Close]
BLAST of CsGy6G002620 vs. ExPASy Swiss-Prot
Match: O65751 (40S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 4.0e-125
Identity = 231/291 (79.38%), Postives = 249/291 (85.57%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MAT  AP RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+K
Sbjct: 1   MATTTAPSRQLTQKEADIQMMLAADVHLGTKNCNFQMERYIFKRRNDGIYIINLGKTWDK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           L LAAR+IV IEN QDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+
Sbjct: 61  LNLAARIIVAIENSQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSD 240
           LARMVLQMRGTIR G KWDVMVDLFFYREPEEAK+PEE+E   P D+ IAD++ + + SD
Sbjct: 181 LARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQPEEDEVAAP-DYAIADFNVSAIPSD 240

Query: 241 -QWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPP 291
            QW + I D  W   DA+P P P VPA    WA  P A+A D W  A  PP
Sbjct: 241 GQWPAAI-DQPWN--DAVPQPIPAVPA--VNWA-APEAVAGD-WGEAVPPP 283

[Close]
BLAST of CsGy6G002620 vs. ExPASy Swiss-Prot
Match: Q08682 (40S ribosomal protein Sa-1 OS=Arabidopsis thaliana OX=3702 GN=RPSaA PE=1 SV=3)

HSP 1 Score: 429.5 bits (1103), Expect = 3.3e-119
Identity = 226/302 (74.83%), Postives = 247/302 (81.79%), Query Frame = 0 

Query: 1   MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT G+A   QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFG-IADYSAAPLT 240
           LLARMVLQMRGTI AG KWDVMVDLFFYREPEE K  +E+EA P A++G +       + 
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVG 240

Query: 241 SDQW-TSQIPDAQW-GAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVS 299
            DQW T+QIPDA W G   A   P    PA+ A W+    A A  GW+AAA P   PA  
Sbjct: 241 GDQWTTAQIPDAAWPGEGQA---PISAAPAA-ASWSDSAAAPADGGWEAAAPPSGAPAAG 298

[Close]
BLAST of CsGy6G002620 vs. NCBI nr
Match: XP_004138372.1 (40S ribosomal protein SA [Cucumis sativus] >KGN45883.1 hypothetical protein Csa_005754 [Cucumis sativus])

HSP 1 Score: 618 bits (1594), Expect = 2.87e-223
Identity = 307/308 (99.68%), Postives = 307/308 (99.68%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSD 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSD
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSD 240

Query: 241 QWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT 300
           QWTSQIPDAQWGAADAIP PAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT
Sbjct: 241 QWTSQIPDAQWGAADAIPSPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT 300

Query: 301 APSSASWF 308
           APSSASWF
Sbjct: 301 APSSASWF 308

[Close]
BLAST of CsGy6G002620 vs. NCBI nr
Match: XP_008463065.1 (PREDICTED: 40S ribosomal protein SA-like [Cucumis melo] >KAA0039133.1 40S ribosomal protein SA-like [Cucumis melo var. makuwa] >TYK26980.1 40S ribosomal protein SA-like [Cucumis melo var. makuwa])

HSP 1 Score: 604 bits (1558), Expect = 8.51e-218
Identity = 300/308 (97.40%), Postives = 303/308 (98.38%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSD 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPL SD
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLASD 240

Query: 241 QWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT 300
           QWTSQIPDAQWGAADA+PPPA VVPASGAEWAPEPVAL ADGWDAAA PPPPPA SA+GT
Sbjct: 241 QWTSQIPDAQWGAADALPPPAAVVPASGAEWAPEPVALTADGWDAAA-PPPPPAASADGT 300

Query: 301 APSSASWF 308
           AP+SASWF
Sbjct: 301 APASASWF 307

[Close]
BLAST of CsGy6G002620 vs. NCBI nr
Match: XP_038886558.1 (40S ribosomal protein SA-like [Benincasa hispida])

HSP 1 Score: 555 bits (1429), Expect = 4.36e-198
Identity = 283/311 (91.00%), Postives = 288/311 (92.60%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQL+QKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLAQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLT-S 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPP DFGIADY AAPL  +
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPPDFGIADYGAAPLVGA 240

Query: 241 DQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPP--AVSA 300
           DQWT+QIPDAQWGA DA+P  A V PAS  EWA EPVALAADGWDAA  P P    AV+A
Sbjct: 241 DQWTAQIPDAQWGAGDAVPAAA-VPPASNVEWAQEPVALAADGWDAAVPPVPAADGAVAA 300

Query: 301 EGTAPSSASWF 308
               PSSASWF
Sbjct: 301 APPPPSSASWF 310

[Close]
BLAST of CsGy6G002620 vs. NCBI nr
Match: XP_022925394.1 (40S ribosomal protein SA-like [Cucurbita moschata] >XP_022973502.1 40S ribosomal protein SA-like [Cucurbita maxima] >XP_023535006.1 40S ribosomal protein SA-like [Cucurbita pepo subsp. pepo] >KAG6592327.1 40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025148.1 40S ribosomal protein SA [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 542 bits (1396), Expect = 4.32e-193
Identity = 273/309 (88.35%), Postives = 282/309 (91.26%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAP RQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           L +AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TG HAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLT-S 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE EEEEALPP DFGIADY AAPL  S
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVAS 240

Query: 241 DQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEG 300
           DQW +QI DAQWGAAD +P PA    AS  EWAPEPV LAA+ W+AA APPPP   +A+G
Sbjct: 241 DQWAAQISDAQWGAADVVPAPAAPA-ASSVEWAPEPVPLAANEWEAAVAPPPPAPPAADG 300

Query: 301 TAPSSASWF 308
            APSSASWF
Sbjct: 301 AAPSSASWF 308

[Close]
BLAST of CsGy6G002620 vs. NCBI nr
Match: XP_022932088.1 (40S ribosomal protein SA-like [Cucurbita moschata] >KAG7037204.1 40S ribosomal protein SA [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 535 bits (1378), Expect = 2.77e-190
Identity = 275/314 (87.58%), Postives = 284/314 (90.45%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLT-S 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE EEEEALPP DFGIADY AAPL  S
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVAS 240

Query: 241 DQWTSQIPDAQWGAADAIPPPAP---VVPASGAEWAPEPVALAADGWDAAAAPP-PPPAV 300
           DQW++QIPDAQWGAAD + P A    + P S  EW  EP ALAADGWDAA APP   PAV
Sbjct: 241 DQWSAQIPDAQWGAADVVVPAAAAAAIPPPSSVEWTSEPAALAADGWDAAVAPPLSAPAV 300

Query: 301 SAEGTAP-SSASWF 308
             +G AP S+  W+
Sbjct: 301 --DGAAPPSNGGWY 312

[Close]
BLAST of CsGy6G002620 vs. ExPASy TrEMBL
Match: A0A0A0K8X1 (40S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_6G016990 PE=3 SV=1)

HSP 1 Score: 618 bits (1594), Expect = 1.39e-223
Identity = 307/308 (99.68%), Postives = 307/308 (99.68%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSD 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSD
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSD 240

Query: 241 QWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT 300
           QWTSQIPDAQWGAADAIP PAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT
Sbjct: 241 QWTSQIPDAQWGAADAIPSPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT 300

Query: 301 APSSASWF 308
           APSSASWF
Sbjct: 301 APSSASWF 308

[Close]
BLAST of CsGy6G002620 vs. ExPASy TrEMBL
Match: A0A5D3DUK0 (40S ribosomal protein SA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold322G00510 PE=3 SV=1)

HSP 1 Score: 604 bits (1558), Expect = 4.12e-218
Identity = 300/308 (97.40%), Postives = 303/308 (98.38%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSD 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPL SD
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLASD 240

Query: 241 QWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT 300
           QWTSQIPDAQWGAADA+PPPA VVPASGAEWAPEPVAL ADGWDAAA PPPPPA SA+GT
Sbjct: 241 QWTSQIPDAQWGAADALPPPAAVVPASGAEWAPEPVALTADGWDAAA-PPPPPAASADGT 300

Query: 301 APSSASWF 308
           AP+SASWF
Sbjct: 301 APASASWF 307

[Close]
BLAST of CsGy6G002620 vs. ExPASy TrEMBL
Match: A0A1S3CJX7 (40S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103501303 PE=3 SV=1)

HSP 1 Score: 604 bits (1558), Expect = 4.12e-218
Identity = 300/308 (97.40%), Postives = 303/308 (98.38%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSD 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPL SD
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLASD 240

Query: 241 QWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT 300
           QWTSQIPDAQWGAADA+PPPA VVPASGAEWAPEPVAL ADGWDAAA PPPPPA SA+GT
Sbjct: 241 QWTSQIPDAQWGAADALPPPAAVVPASGAEWAPEPVALTADGWDAAA-PPPPPAASADGT 300

Query: 301 APSSASWF 308
           AP+SASWF
Sbjct: 301 APASASWF 307

[Close]
BLAST of CsGy6G002620 vs. ExPASy TrEMBL
Match: A0A6J1I7P9 (40S ribosomal protein SA OS=Cucurbita maxima OX=3661 GN=LOC111472042 PE=3 SV=1)

HSP 1 Score: 542 bits (1396), Expect = 2.09e-193
Identity = 273/309 (88.35%), Postives = 282/309 (91.26%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAP RQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           L +AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TG HAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLT-S 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE EEEEALPP DFGIADY AAPL  S
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVAS 240

Query: 241 DQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEG 300
           DQW +QI DAQWGAAD +P PA    AS  EWAPEPV LAA+ W+AA APPPP   +A+G
Sbjct: 241 DQWAAQISDAQWGAADVVPAPAAPA-ASSVEWAPEPVPLAANEWEAAVAPPPPAPPAADG 300

Query: 301 TAPSSASWF 308
            APSSASWF
Sbjct: 301 AAPSSASWF 308

[Close]
BLAST of CsGy6G002620 vs. ExPASy TrEMBL
Match: A0A6J1EC15 (40S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111432696 PE=3 SV=1)

HSP 1 Score: 542 bits (1396), Expect = 2.09e-193
Identity = 273/309 (88.35%), Postives = 282/309 (91.26%), Query Frame = 0 

Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAP RQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           L +AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TG HAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLT-S 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE EEEEALPP DFGIADY AAPL  S
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVAS 240

Query: 241 DQWTSQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEG 300
           DQW +QI DAQWGAAD +P PA    AS  EWAPEPV LAA+ W+AA APPPP   +A+G
Sbjct: 241 DQWAAQISDAQWGAADVVPAPAAPA-ASSVEWAPEPVPLAANEWEAAVAPPPPAPPAADG 300

Query: 301 TAPSSASWF 308
            APSSASWF
Sbjct: 301 AAPSSASWF 308

[Close]
BLAST of CsGy6G002620 vs. TAIR 10
Match: AT1G72370.1 (40s ribosomal protein SA )

HSP 1 Score: 429.5 bits (1103), Expect = 2.3e-120
Identity = 226/302 (74.83%), Postives = 247/302 (81.79%), Query Frame = 0 

Query: 1   MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT G+A   QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFG-IADYSAAPLT 240
           LLARMVLQMRGTI AG KWDVMVDLFFYREPEE K  +E+EA P A++G +       + 
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVG 240

Query: 241 SDQW-TSQIPDAQW-GAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVS 299
            DQW T+QIPDA W G   A   P    PA+ A W+    A A  GW+AAA P   PA  
Sbjct: 241 GDQWTTAQIPDAAWPGEGQA---PISAAPAA-ASWSDSAAAPADGGWEAAAPPSGAPAAG 298

[Close]
BLAST of CsGy6G002620 vs. TAIR 10
Match: AT1G72370.2 (40s ribosomal protein SA )

HSP 1 Score: 424.5 bits (1090), Expect = 7.4e-119
Identity = 225/302 (74.50%), Postives = 246/302 (81.46%), Query Frame = 0 

Query: 1   MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT G+A   QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFG-IADYSAAPLT 240
           LLARMVLQMRGTI AG KWDVMVDLFFYREPEE K  +E+EA P A++G +       + 
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVG 240

Query: 241 SDQW-TSQIPDAQW-GAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVS 299
            DQW T+QIPDA W G   A   P    PA+ A W+      A  GW+AAA P   PA  
Sbjct: 241 GDQWTTAQIPDAAWPGEGQA---PISAAPAA-ASWSDS----ADGGWEAAAPPSGAPAAG 294

[Close]
BLAST of CsGy6G002620 vs. TAIR 10
Match: AT3G04770.2 (40s ribosomal protein SA B )

HSP 1 Score: 412.5 bits (1059), Expect = 2.9e-115
Identity = 212/286 (74.13%), Postives = 238/286 (83.22%), Query Frame = 0 

Query: 5   AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 64
           A   RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+A
Sbjct: 7   ATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMA 66

Query: 65  ARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 124
           ARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TG +AIAGRHTPGTFTNQ+QTSF+EPRL
Sbjct: 67  ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRL 126

Query: 125 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 184
           LILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 127 LILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARM 186

Query: 185 VLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSDQW-T 244
           VLQMRGTI A  KWDVMVDLFFYREPEEAK+  +EEA   AD+G+       +  DQW T
Sbjct: 187 VLQMRGTILAAQKWDVMVDLFFYREPEEAKQEGDEEAEVQADYGM-------VGGDQWTT 246

Query: 245 SQIPDAQWGAADAIPPPAPVVPASGAEWAPEPVALAADGWDAAAAP 290
           +QI DA W  +  +  P    PA G       V +AA GW+AA+ P
Sbjct: 247 AQISDAAW--SGEVEQPISAAPAVG-------VTVAA-GWEAASVP 275

[Close]
BLAST of CsGy6G002620 vs. TAIR 10
Match: AT3G04770.1 (40s ribosomal protein SA B )

HSP 1 Score: 365.2 bits (936), Expect = 5.3e-101
Identity = 173/199 (86.93%), Postives = 189/199 (94.97%), Query Frame = 0 

Query: 5   AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 64
           A   RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+A
Sbjct: 7   ATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMA 66

Query: 65  ARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 124
           ARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TG +AIAGRHTPGTFTNQ+QTSF+EPRL
Sbjct: 67  ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRL 126

Query: 125 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 184
           LILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 127 LILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARM 186

Query: 185 VLQMRGTIRAGHKWDVMVD 204
           VLQMRGTI A  KWDVMV+
Sbjct: 187 VLQMRGTILAAQKWDVMVN 205

The following BLAST results are available for this feature:
BLAST of CsGy6G002620 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O225182.2e-12881.1640S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1[more]
O803771.1e-12779.2840S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1[more]
A5BUU41.5e-12776.8340S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV... [more]
O657514.0e-12579.3840S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1[more]
Q086823.3e-11974.8340S ribosomal protein Sa-1 OS=Arabidopsis thaliana OX=3702 GN=RPSaA PE=1 SV=3[more]
BLAST of CsGy6G002620 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004138372.12.87e-22399.6840S ribosomal protein SA [Cucumis sativus] >KGN45883.1 hypothetical protein Csa_... [more]
XP_008463065.18.51e-21897.40PREDICTED: 40S ribosomal protein SA-like [Cucumis melo] >KAA0039133.1 40S riboso... [more]
XP_038886558.14.36e-19891.0040S ribosomal protein SA-like [Benincasa hispida][more]
XP_022925394.14.32e-19388.3540S ribosomal protein SA-like [Cucurbita moschata] >XP_022973502.1 40S ribosomal... [more]
XP_022932088.12.77e-19087.5840S ribosomal protein SA-like [Cucurbita moschata] >KAG7037204.1 40S ribosomal p... [more]
BLAST of CsGy6G002620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8X11.39e-22399.6840S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_6G016990 PE=3 SV=1[more]
A0A5D3DUK04.12e-21897.4040S ribosomal protein SA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A1S3CJX74.12e-21897.4040S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103501303 PE=3 SV=1[more]
A0A6J1I7P92.09e-19388.3540S ribosomal protein SA OS=Cucurbita maxima OX=3661 GN=LOC111472042 PE=3 SV=1[more]
A0A6J1EC152.09e-19388.3540S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111432696 PE=3 SV=1[more]
BLAST of CsGy6G002620 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G72370.12.3e-12074.8340s ribosomal protein SA [more]
AT1G72370.27.4e-11974.5040s ribosomal protein SA [more]
AT3G04770.22.9e-11574.1340s ribosomal protein SA B [more]
AT3G04770.15.3e-10186.9340s ribosomal protein SA B [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001865Ribosomal protein S2PRINTSPR00395RIBOSOMALS2coord: 122..139
score: 44.62
coord: 18..36
score: 36.11
coord: 48..57
score: 64.92
coord: 139..150
score: 51.15
coord: 97..114
score: 47.01
coord: 160..174
score: 53.64
IPR001865Ribosomal protein S2PFAMPF00318Ribosomal_S2coord: 21..114
e-value: 3.2E-13
score: 49.4
coord: 120..185
e-value: 5.1E-12
score: 45.5
IPR001865Ribosomal protein S2CDDcd01425RPS2coord: 21..187
e-value: 1.79719E-73
score: 222.457
IPR005707Ribosomal protein S2, eukaryotic/archaealTIGRFAMTIGR01012TIGR01012coord: 13..209
e-value: 4.5E-96
score: 318.0
IPR005707Ribosomal protein S2, eukaryotic/archaealPANTHERPTHR1148940S RIBOSOMAL PROTEIN SAcoord: 10..299
NoneNo IPR availableGENE3D3.40.50.10490coord: 17..222
e-value: 4.0E-104
score: 348.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..308
NoneNo IPR availablePANTHERPTHR11489:SF2540S RIBOSOMAL PROTEIN SAcoord: 10..299
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00962RIBOSOMAL_S2_1coord: 18..29
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00963RIBOSOMAL_S2_2coord: 122..146
IPR027498Ribosomal protein S2, eukaryoticHAMAPMF_03015Ribosomal_S2_eukcoord: 5..274
score: 50.616367
IPR023591Ribosomal protein S2, flavodoxin-like domain superfamilySUPERFAMILY52313Ribosomal protein S2coord: 13..203

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G002620.2CsGy6G002620.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0000028 ribosomal small subunit assembly
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005840 ribosome
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome