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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTCGGCAAGATTCAATATGAAGATGATGGGGCATTGTAACCGCCAAATACTAATTGGCGCTTTTAACCGCAATCCACGCTCAGAATCAAAGTTCGGGTCAACTCCAAGCCCACATCATAACTCCCTAAACCAACCAATCAGATTTCACTCAAGTCCAAATTTCAACTGTCAAAGTACCAAATACTTTGACTTTTTAGCTTCAACCAATCACCAACTTCCACGTTTCTTCCCATGCGTCGAATTAGAAGCAGAGGAACTTCCCCCTAAAGCTCGTATGCAAAAGAAGAATAATTGAGCTAACTCGAAATTACAACTCAGTGAAGCCTTTTCTTTTTCCTCTTTTTGCTCTGCGAGCGAGTTGCAGAATCGGTCCCCTCAAAACACCATCATCACTACCTCCATTAAAATCCTCCATGAAGCATTATAGTTTCGAGAATCGGTTTCACATCATGAACTCCTCCTCTAAAACTCCAACCCACATTCTCTTTAAATTCCCATAA mRNA sequence ATGTCGGCAAGATTCAATATGAAGATGATGGGGCATTGTAACCGCCAAATACTAATTGGCGCTTTTAACCGCAATCCACGCTCAGAATCAAAGTTCGGGTCAACTCCAAGCCCACATCATAACTCCCTAAACCAACCAATCAGATTTCACTCAAGTCCAAATTTCAACTGTCAAAGTACCAAATACTTTGACTTTTTAGCTTCAACCAATCACCAACTTCCACGTTTCTTCCCATGCGTCGAATTAGAAGCAGAGGAACTTCCCCCTAAAGCTCCGAGTTGCAGAATCGGTCCCCTCAAAACACCATCATCACTACCTCCATTAAAATCCTCCATGAAGCATTATAGTTTCGAGAATCGGTTTCACATCATGAACTCCTCCTCTAAAACTCCAACCCACATTCTCTTTAAATTCCCATAA Coding sequence (CDS) ATGTCGGCAAGATTCAATATGAAGATGATGGGGCATTGTAACCGCCAAATACTAATTGGCGCTTTTAACCGCAATCCACGCTCAGAATCAAAGTTCGGGTCAACTCCAAGCCCACATCATAACTCCCTAAACCAACCAATCAGATTTCACTCAAGTCCAAATTTCAACTGTCAAAGTACCAAATACTTTGACTTTTTAGCTTCAACCAATCACCAACTTCCACGTTTCTTCCCATGCGTCGAATTAGAAGCAGAGGAACTTCCCCCTAAAGCTCCGAGTTGCAGAATCGGTCCCCTCAAAACACCATCATCACTACCTCCATTAAAATCCTCCATGAAGCATTATAGTTTCGAGAATCGGTTTCACATCATGAACTCCTCCTCTAAAACTCCAACCCACATTCTCTTTAAATTCCCATAA Protein sequence MSARFNMKMMGHCNRQILIGAFNRNPRSESKFGSTPSPHHNSLNQPIRFHSSPNFNCQSTKYFDFLASTNHQLPRFFPCVELEAEELPPKAPSCRIGPLKTPSSLPPLKSSMKHYSFENRFHIMNSSSKTPTHILFKFP*
Homology
BLAST of CsGy6G002135 vs. NCBI nr
Match: KGN45826.1 (hypothetical protein Csa_004802 [Cucumis sativus]) HSP 1 Score: 287 bits (735), Expect = 6.34e-98 Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0
Query: 1 MSARFNMKMMGHCNRQILIGAFNRNPRSESKFGSTPSPHHNSLNQPIRFHSSPNFNCQST 60
MSARFNMKMMGHCNRQILIGAFNRNPRSESKF STPSPHHNSLNQPIRFHSSPNFNCQST
Sbjct: 1 MSARFNMKMMGHCNRQILIGAFNRNPRSESKFRSTPSPHHNSLNQPIRFHSSPNFNCQST 60
Query: 61 KYFDFLASTNHQLPRFFPCVELEAEELPPKAPSCRIGPLKTPSSLPPLKSSMKHYSFENR 120
KYFDFLASTNHQLPRFFPCVELEAEELPPKAPSCRIGPLKTPSSLPPLKSSMKHYSFENR
Sbjct: 61 KYFDFLASTNHQLPRFFPCVELEAEELPPKAPSCRIGPLKTPSSLPPLKSSMKHYSFENR 120
Query: 121 FHIMNSSSKTPTHILFKFP 139
FHIMNSSSKTPTHILFKFP
Sbjct: 121 FHIMNSSSKTPTHILFKFP 139
BLAST of CsGy6G002135 vs. ExPASy TrEMBL
Match: A0A0A0KDG2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014470 PE=4 SV=1) HSP 1 Score: 287 bits (735), Expect = 3.07e-98 Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0
Query: 1 MSARFNMKMMGHCNRQILIGAFNRNPRSESKFGSTPSPHHNSLNQPIRFHSSPNFNCQST 60
MSARFNMKMMGHCNRQILIGAFNRNPRSESKF STPSPHHNSLNQPIRFHSSPNFNCQST
Sbjct: 1 MSARFNMKMMGHCNRQILIGAFNRNPRSESKFRSTPSPHHNSLNQPIRFHSSPNFNCQST 60
Query: 61 KYFDFLASTNHQLPRFFPCVELEAEELPPKAPSCRIGPLKTPSSLPPLKSSMKHYSFENR 120
KYFDFLASTNHQLPRFFPCVELEAEELPPKAPSCRIGPLKTPSSLPPLKSSMKHYSFENR
Sbjct: 61 KYFDFLASTNHQLPRFFPCVELEAEELPPKAPSCRIGPLKTPSSLPPLKSSMKHYSFENR 120
Query: 121 FHIMNSSSKTPTHILFKFP 139
FHIMNSSSKTPTHILFKFP
Sbjct: 121 FHIMNSSSKTPTHILFKFP 139
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| KGN45826.1 | 6.34e-98 | 99.28 | hypothetical protein Csa_004802 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KDG2 | 3.07e-98 | 99.28 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014470 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 25..47 |
Relationships
The following mRNA feature(s) are a part of this gene:
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