CsGy6G000070 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAAATTGCTTTATAAAGTTTTTTTAAAAAAATAGAAATGGATTTGGTGGGGGTATAAATAATATTGGGCCGAAACGGAACCGGGAATTCACCGCGGCTCAAAATTTCGACTCAAAGCCCTAAACCTCGCGAGAGAAAAACCTTCCGAGTTCCGATGGCTACCACCAACAACCTCCATGGCTCTGGTACTCCTCTTTCTTTTTATGTTTTCTTCATTTTTATTTTCTATTTCTGCTTCCTTTTTCTGTTTGCTTTCATCTAACCAGAATTGTATGATTGTGATTCGAATTCACATCCAGCAAGTCATTTAATATGTATGCATTTTCTTACTCTTCGTGGCATTGTAATTCTCTTTGAGTTGAACTTTCTATTGTTTGCTGAAGACTAAGAAGCGTATTGAGGGGTTCTATTTTTTAGTATATTTGACCTGGGTATTTGCTAAATTTTAAAATTTTCACTGTGGGGTTAAGTTTCCATATACTGTTGGCTCAGAGATATGCAATATTTGAAGGTGGGTGGGTGCTTTATGAAAACTTTTTTTTTTTGCTATGGAAATTCAAACCCGGTTGATTTTATGTGTTTTCTAAAGTATAATTGTGTCCAGGCCTTTAGGATCGTCTAACCTAGAAGCTATAATGTATAATTTTGGTATTTTTCTTTTCAATCCTTGCTGCTTAAATTTCACAATTCATCTTGTTAACTGTTTTCGTTTTTACAATACTTTCTCGTACAGGATTCCTTCAATTCTCAATGTTACATTATTTGACGTCCAAACCTTTAGGCATTTTTCATTTTTTCTTGTTTTGACCTTGGGAGTTCTGTTTTTTATCTGTACTGGGATGTGGAATTTAATTTTGAAGATCATACCTCCATGGGTAAAGATCATTTGGGTCAACAAAAGGCGTTTGTTCCTTGAAATAATTGGAGGGAGAGTCTTTCTATTGATTGGCGTTTTATCATCTTTTGTTGCCTTCTTGTTATCTTTATTTGCTGGACTATTTTTAAGTGTTTAATCTCTATTAATATTCTTACCTAACTTAATTGTCAAATTAATAGTTGATCCTCCTTACTCAAGTATTGGTTCGTGTATAGTAACATCTCATGCAAGGTTTCAGCTTTTCCTATTTTTCCTTGAAGGTTGAGTTTTTCCACATAATATGTCAGATTCTGTGAATGAAGTGCTTATGGAATCAGCTAAAGAAGGATCTGCTAATATGAGGTCAGAGGGAAAGACTAGTGACACAGGTAAGAATAGGTAGTGCGAACTTGATGTCCTTTATTGTTTCTTGTTTAATTCTTTTCCTTAACATACATATTGTGCTTTTAACATTAAATTGCGCATTAAGAGGTATGGTGCTATTCTTCTTTATCATTGTAGAAATAAAAGCACGTGTTGATTCCATGTGGGAGCAAATGAACAAAGGGGTGTCCAGCAAAACACTAAAAGGTTTGTCAACCAAACGATCTCCAGCTGTGAATAAAAACTCAAAGAAGCCATCCAATGTAAAAATTCACATTCTGCTCTTGCATAACGAGGCAGCTCAAAATATAGGAAATATATCTCATACTTTTTTCTCTCCCCATCTCCCCTGTGTCTAGAATTGGATGGCATATCTTGGTATGGCATCAAAGAAGCCTCAGGAAAAAGATATATTATCAGAAGGATCCAAGGTTCTGCAGAACAGTTCTATTGATGATGCAAAGATGCTTGCTGCTACTGCGCTCTCAGCTGTTAGGGATGCTACAGCAACTATCTCTGGCAGGGGGAAAGTTGAGGTGCCATTACTTTCATCACTATTTTTCATTTGTTTTTCTACTCTTTTAGGTGTGAATTGTGATTATCTAGGCATTTGGTTTTTTTATTGCTTTGATGCATATAGAGCTGAAAATAGTTTCTCTGGCTAGATTGGATAGTTTTTTAGAGAATCATTTGTTGTTGGGATGGAAGGAGAATATCCTTCTGTAATGATGGTGGGTAGGTTTGAAATACTCTTCTTCTTCAGTGTCTGTCTATCTCTCTCTCTGTCCTTTTTTTGGTGATTTCTCCACAGAAAGAAAAGGTCTTGGTCTTTGATGCTTGGGAAGAAGGAACTCATCCTTGGGGAATGGGTGTGAGGAAAATAGATAGGAGCTGCACTTGACTTGGTTGATGAGGTGAATCAAGGAAAGATGAAAGAGTTTAGAAGGTTGATCCATGTACAACATTGTTTGTGAAGCTACATTGCTGAAGGCCAGTACATGCTGGAAACCGAATATTTTGGTGAAGTAATTGTTTTACTGTGGATACTACAATTTAGTAGCATTTACATTACAACAAGTGAGTTGCAGAAAAGGTGTCACCTGTTGCTTTTTGAAAAAAGAGAAGAAAAAGGGTCATCCGTTACTTTAAGCTTCCTACTGCCTTTGCATAAAGGCAGGGGAGGGTTAAGCGCATTTGTCTTTTTGATGTTCATATGGCAAAAGCTGTTGGGAATCAGGATAATCCTCTTATATATTTTGGTTTCTCATAGCCTCATAGCTGTTGGACAAATGTCCTATGGGGGGTAACATCCGCAGTGTAAAGCTCAAAACCAAAGTTAAATTGTTATGGATTAATGCCACTAGATCAATCATTGGGAGGATATACTTTGAAAAAGATCAAATTGGAGAAGTTTTTGGGTGAGAGTGTATATTATTACAAATCGCCAGGCTTCTTCTTGGTGTGGCTTGTCTACCATATTTTGCACCTATACCTCCAATTTAATTTAGTTTTAGTTTTTGGGGGGCTTGTGTGGGAGGGGTTTTACGGGAGAGAGTTCTACAAGAGGTTGATAGTTCTGATATTTCAAAACTGGATTTGATTTGTGCAAACTTGCCTCCAATCAGATTGTGTGGTTTCTTTTCCTCTTTTATTTCATTTTACAATACCATTTCTTGTAAAACAGTGAAACATCAAGTTTAGGCATTTATTATATTGATCGGTTAGTTGATGAACTCAAACCATTGGCTTTTTTACTTTCAACAGATCACAGAGATTAGGGACTTTGCAGGCCAAAATGTTGAAATTAAAAAGTTTGTAGATGCGGATTCAAAAGAAGCACACGAGAAAATGAAGGCACCTGCTACTTCAGCTGTCGATGTAGTCCTCGAACAAATCAAGAAGAAACAAAAGCTTAGTGTTCTTGACAAGACGAAAAAGGACTGGGGAGAGTTTAAGGAAGAAAACAAGGGTCTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCGAACCAATATCTTGATAAAGTTTCTTTTTTGCAGCGAACCGATTACAGGGAGTTTGAACGAGAGAGGGATGCACGATTGGCTTTGCAGGCCCGACGAAGGCCTGATATGCGGGAGGAGCCATAATTAAAGTCATCATCTGAAGCTCTTTGAAGAATGTGCCCTTATTTTTAAGGTTCTGAGAATTTTCTTGTGCCCTAACTGGCGTCTGCTCTCATAGTCTTGAACAGATCAGAAAAAATTCCTATAGCGCAGTTGTTTTTCATTCTTCTGTTGTGTATAGATAAATCTTCGAGCCTTGGAAATATTAGATTGTGCTTTCATTCTTGCCATTTTTGTCCAATATTAGATTGTGCTTTCATTCTTGCCAATTTT TTAAATTGCTTTATAAAGTTTTTTTAAAAAAATAGAAATGGATTTGGTGGGGGTATAAATAATATTGGGCCGAAACGGAACCGGGAATTCACCGCGGCTCAAAATTTCGACTCAAAGCCCTAAACCTCGCGAGAGAAAAACCTTCCGAGTTCCGATGGCTACCACCAACAACCTCCATGGCTCTGATTCTGTGAATGAAGTGCTTATGGAATCAGCTAAAGAAGGATCTGCTAATATGAGGTCAGAGGGAAAGACTAGTGACACAGAAATAAAAGCACGTGTTGATTCCATGTGGGAGCAAATGAACAAAGGGGTGTCCAGCAAAACACTAAAAGGTTTGTCAACCAAACGATCTCCAGCTGTGAATAAAAACTCAAAGAAGCCATCCAATAATTGGATGGCATATCTTGGTATGGCATCAAAGAAGCCTCAGGAAAAAGATATATTATCAGAAGGATCCAAGGTTCTGCAGAACAGTTCTATTGATGATGCAAAGATGCTTGCTGCTACTGCGCTCTCAGCTGTTAGGGATGCTACAGCAACTATCTCTGGCAGGGGGAAAGTTGAGATCACAGAGATTAGGGACTTTGCAGGCCAAAATGTTGAAATTAAAAAGTTTGTAGATGCGGATTCAAAAGAAGCACACGAGAAAATGAAGGCACCTGCTACTTCAGCTGTCGATGTAGTCCTCGAACAAATCAAGAAGAAACAAAAGCTTAGTGTTCTTGACAAGACGAAAAAGGACTGGGGAGAGTTTAAGGAAGAAAACAAGGGTCTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCGAACCAATATCTTGATAAAGTTTCTTTTTTGCAGCGAACCGATTACAGGGAGTTTGAACGAGAGAGGGATGCACGATTGGCTTTGCAGGCCCGACGAAGGCCTGATATGCGGGAGGAGCCATAATTAAAGTCATCATCTGAAGCTCTTTGAAGAATGTGCCCTTATTTTTAAGGTTCTGAGAATTTTCTTGTGCCCTAACTGGCGTCTGCTCTCATAGTCTTGAACAGATCAGAAAAAATTCCTATAGCGCAGTTGTTTTTCATTCTTCTGTTGTGTATAGATAAATCTTCGAGCCTTGGAAATATTAGATTGTGCTTTCATTCTTGCCATTTTTGTCCAATATTAGATTGTGCTTTCATTCTTGCCAATTTT ATGGCTACCACCAACAACCTCCATGGCTCTGATTCTGTGAATGAAGTGCTTATGGAATCAGCTAAAGAAGGATCTGCTAATATGAGGTCAGAGGGAAAGACTAGTGACACAGAAATAAAAGCACGTGTTGATTCCATGTGGGAGCAAATGAACAAAGGGGTGTCCAGCAAAACACTAAAAGGTTTGTCAACCAAACGATCTCCAGCTGTGAATAAAAACTCAAAGAAGCCATCCAATAATTGGATGGCATATCTTGGTATGGCATCAAAGAAGCCTCAGGAAAAAGATATATTATCAGAAGGATCCAAGGTTCTGCAGAACAGTTCTATTGATGATGCAAAGATGCTTGCTGCTACTGCGCTCTCAGCTGTTAGGGATGCTACAGCAACTATCTCTGGCAGGGGGAAAGTTGAGATCACAGAGATTAGGGACTTTGCAGGCCAAAATGTTGAAATTAAAAAGTTTGTAGATGCGGATTCAAAAGAAGCACACGAGAAAATGAAGGCACCTGCTACTTCAGCTGTCGATGTAGTCCTCGAACAAATCAAGAAGAAACAAAAGCTTAGTGTTCTTGACAAGACGAAAAAGGACTGGGGAGAGTTTAAGGAAGAAAACAAGGGTCTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCGAACCAATATCTTGATAAAGTTTCTTTTTTGCAGCGAACCGATTACAGGGAGTTTGAACGAGAGAGGGATGCACGATTGGCTTTGCAGGCCCGACGAAGGCCTGATATGCGGGAGGAGCCATAA MATTNNLHGSDSVNEVLMESAKEGSANMRSEGKTSDTEIKARVDSMWEQMNKGVSSKTLKGLSTKRSPAVNKNSKKPSNNWMAYLGMASKKPQEKDILSEGSKVLQNSSIDDAKMLAATALSAVRDATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAHEKMKAPATSAVDVVLEQIKKKQKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRTDYREFERERDARLALQARRRPDMREEP* Homology
BLAST of CsGy6G000070 vs. ExPASy Swiss-Prot
Match: Q9UEE9 (Craniofacial development protein 1 OS=Homo sapiens OX=9606 GN=CFDP1 PE=1 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.4e-13 Identity = 80/256 (31.25%), Postives = 123/256 (48.05%), Query Frame = 0
BLAST of CsGy6G000070 vs. ExPASy Swiss-Prot
Match: Q75QI0 (Craniofacial development protein 1 OS=Gallus gallus OX=9031 GN=CFDP1 PE=2 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.3e-12 Identity = 62/195 (31.79%), Postives = 101/195 (51.79%), Query Frame = 0
BLAST of CsGy6G000070 vs. ExPASy Swiss-Prot
Match: Q75UQ2 (Craniofacial development protein 1 OS=Rattus norvegicus OX=10116 GN=Cfdp1 PE=1 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 5.0e-12 Identity = 67/199 (33.67%), Postives = 97/199 (48.74%), Query Frame = 0
BLAST of CsGy6G000070 vs. ExPASy Swiss-Prot
Match: Q60FC2 (Craniofacial development protein 1 OS=Tragulus javanicus OX=9849 GN=CFDP1 PE=2 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 8.5e-12 Identity = 54/135 (40.00%), Postives = 78/135 (57.78%), Query Frame = 0
BLAST of CsGy6G000070 vs. ExPASy Swiss-Prot
Match: Q4ADK4 (Craniofacial development protein 1 OS=Muntiacus reevesi OX=9886 GN=CFDP1 PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.9e-11 Identity = 78/258 (30.23%), Postives = 122/258 (47.29%), Query Frame = 0
BLAST of CsGy6G000070 vs. NCBI nr
Match: XP_004138527.1 (craniofacial development protein 1 isoform X1 [Cucumis sativus] >KGN45609.1 hypothetical protein Csa_004824 [Cucumis sativus]) HSP 1 Score: 474 bits (1219), Expect = 9.46e-168 Identity = 258/259 (99.61%), Postives = 258/259 (99.61%), Query Frame = 0
BLAST of CsGy6G000070 vs. NCBI nr
Match: XP_008458319.1 (PREDICTED: LOW QUALITY PROTEIN: craniofacial development protein 1 [Cucumis melo]) HSP 1 Score: 464 bits (1195), Expect = 4.30e-164 Identity = 252/259 (97.30%), Postives = 256/259 (98.84%), Query Frame = 0
BLAST of CsGy6G000070 vs. NCBI nr
Match: XP_004138528.1 (craniofacial development protein 1 isoform X2 [Cucumis sativus]) HSP 1 Score: 456 bits (1172), Expect = 1.03e-160 Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 0
BLAST of CsGy6G000070 vs. NCBI nr
Match: TYK02974.1 (craniofacial development protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 448 bits (1153), Expect = 8.09e-158 Identity = 244/250 (97.60%), Postives = 248/250 (99.20%), Query Frame = 0
BLAST of CsGy6G000070 vs. NCBI nr
Match: XP_038906898.1 (craniofacial development protein 1 isoform X1 [Benincasa hispida]) HSP 1 Score: 444 bits (1141), Expect = 7.28e-156 Identity = 241/259 (93.05%), Postives = 251/259 (96.91%), Query Frame = 0
BLAST of CsGy6G000070 vs. ExPASy TrEMBL
Match: A0A0A0K9U3 (BCNT-C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G00090 PE=4 SV=1) HSP 1 Score: 474 bits (1219), Expect = 4.58e-168 Identity = 258/259 (99.61%), Postives = 258/259 (99.61%), Query Frame = 0
BLAST of CsGy6G000070 vs. ExPASy TrEMBL
Match: A0A1S3C8V1 (LOW QUALITY PROTEIN: craniofacial development protein 1 OS=Cucumis melo OX=3656 GN=LOC103497769 PE=4 SV=1) HSP 1 Score: 464 bits (1195), Expect = 2.08e-164 Identity = 252/259 (97.30%), Postives = 256/259 (98.84%), Query Frame = 0
BLAST of CsGy6G000070 vs. ExPASy TrEMBL
Match: A0A5D3BUX3 (Craniofacial development protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00590 PE=4 SV=1) HSP 1 Score: 448 bits (1153), Expect = 3.92e-158 Identity = 244/250 (97.60%), Postives = 248/250 (99.20%), Query Frame = 0
BLAST of CsGy6G000070 vs. ExPASy TrEMBL
Match: A0A6J1H4U3 (craniofacial development protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460409 PE=4 SV=1) HSP 1 Score: 439 bits (1129), Expect = 2.55e-154 Identity = 240/261 (91.95%), Postives = 250/261 (95.79%), Query Frame = 0
BLAST of CsGy6G000070 vs. ExPASy TrEMBL
Match: A0A6J1KYB0 (craniofacial development protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499305 PE=4 SV=1) HSP 1 Score: 434 bits (1117), Expect = 1.72e-152 Identity = 237/261 (90.80%), Postives = 250/261 (95.79%), Query Frame = 0
BLAST of CsGy6G000070 vs. TAIR 10
Match: AT5G30490.1 (CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). ) HSP 1 Score: 212.6 bits (540), Expect = 3.7e-55 Identity = 129/240 (53.75%), Postives = 171/240 (71.25%), Query Frame = 0
BLAST of CsGy6G000070 vs. TAIR 10
Match: AT5G30490.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). ) HSP 1 Score: 212.6 bits (540), Expect = 3.7e-55 Identity = 129/240 (53.75%), Postives = 171/240 (71.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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