CsGy5G030200 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAGGAGACAGAAATGGAGAGAAATTTTACGGTATCCAAACGCCTTCTCTTCGATCGTCGCTACGGTTGGGTGTTAGTCTCTCTTTCCCTCTCTCGATTTCAGCTCCCGGTCTGTAAATTCTTAATTTGGATTTTGATGATTTTTACCTTTGGTTTCCAGGATTGATGAGTGGAAAGACCCTTCGGAAGAAGCTTTGGCCGGTGGCCGAGGAATGTATGTCTGTTTTTTTTTTTTTTTTTGCATGTATATTTCATCAGCTTTGGAAGTTATGCTTTCCGTTGTTTCCATTTTCATTTGGGTTGATGCTCTTTTTTCTGTGATTAGCATAGTTTCTAATTTTCGCTACCATTTCTGCTTTCTCTTATATTTGCTGGTTTTTCTAGTTTACTTGTTTATGAAGCAGAAAATTGAAACTCTAGATTGACCTCTTTATGTTATATCTTTGTTAGGTTCTGCATAGTGCCTCTCGTCAAAAGTTTGGTTAACTCAGTCACACAGATGGTATGGTTCTAACCTTATTCACTGTTGTTCTTGTTGCTGTTGTATTTTTTTTTTTTTTTTTTGTTAAACAATTGAATTTAATCAAAATGTAAGAAGTAGAATTCCCATGTAGTAAAACGTGTTAAAGAAAACCCTTTGCAATGAATGTTTAGAAATTTGCAATTGTAAGTGAACTGTGGCTTGATTGAATTTGGGGTGTTTGGGTTAGACAGATCTTGGTGCATAGACTCTTCAATGTAAATAATTATTTGAGTGTTGTGTAAGTATTTAGTTCCGAGACAGTTGGGAAGTTCCAAAATCCATTGTTTAGTTAGTTACTCAAGTGGTTTATCTTGGTCTGGTTCCTCAGTTTTGATTCATTCCTTTCCTTCTTCCTTTTCCATTATTTTTTTGAAACCTTGGATGCGTATTTTGTTATATTTGTAAATAAGAAAATTTCCCATTAAGAAGAGTACAAGAATTCAATGGAGGTGACTCAATAAAGCAATGCCCTATTGTTAGGAATTAATTGCTAGGAGCCCACTTGTAAGGAATTAAGGAAAGAGGAAGATTACAAAAAATGATTAGATAGAGTGGATTCAAAATATCCTCCCATGATTGTTCTAATACTCAAAGGCCACGCCCAAAAGAACCTTCCTGTATGTTTCCACTTAGATTTCTCATACCATATGAGGAAACCCACTTGCCTGATAATCACCGCATGGCTGCGTATTGGTGACAGCAAAAAAAAAAAAAAAATGTCTACGATCAATAGTACTAGGAAGTTGGAACAACTCGTATTAGTCAGCCCTTTCTATTTGGTAGAATCTTTCTTTTATCCTCATGTCTGCTTTGCCCGGGGAATAAATGAGGCATTGTGTGGATTAGATAGAGCCTTGGGTTTGATTCCTCTTCAATTCATACTTCAATTTGAGGAGAGAACCAAGACTGTGAACTGCTTCAGTTAGTTTCTAATTTCTTCTATTAGTCACATACAGGTGTCATCAGTTGGGGTGGTTCCAGATATTAAATAAGGGGACGACTGTTGGCTTTTGCTAATGTCTGGGGGTACTGATTCTTTTTAACCAGTTACAACTCATAATATGTAGCAAGATTTCTTCTTTGATATCTATAAGTTCAATCATTTATCGTTTTGGATTATTTTGAAACGATGCATAAACAAGGTTTAAGAGAGGGTTTGATGTTCTTGGGTGCACAAAAATGTTTAGTATTTTTATCCATAGTATGTATTATTAAGCTGCAATTCCTTGGGTATAAATCTGAGACCATTTATTACTCAAGTACTCGCGTAATTCTCGATTTGTTGTAGGTTAATATTGCAACAGTATCCACAGTTAAAGCTGTTGAAAATCCAGAGCTACTTTCACCTCAGGTACTACAAGCAGGTCTGCATCAAAGCCTTGAGAAATTCACTTCGTCCATCCAAAACTCACCATTTCACCTTGGCTTCCAGAAAGTTACTGCGCCTTCAGTTTCAACTTGTTCCTTGCATCTACAAGATGAAAAAATTGATCACAGTTAGCTGAATGAATATTGATCCTTACTCACTTGAAACTTGAAGAGATTAATTTGTACTTGAGAAAAGAAAAATGAAGATGATATCAACATGAAGGTGAAAGTATCTTTATAATCCCTACCATCTTCAATTTTTTCCTAAACTCTTCTTCAATGTTCTCACCAACCTTTTCAATCATTTTTTCTTTCTTTCTATCTAATTCTATTTATAAATTGGCTAAGAAACTTTAAAACTAAATTTT TGAGGAGACAGAAATGGAGAGAAATTTTACGGTATCCAAACGCCTTCTCTTCGATCGTCGCTACGGTTGGGTGATTGATGAGTGGAAAGACCCTTCGGAAGAAGCTTTGGCCGGTGGCCGAGGAATGTTCTGCATAGTGCCTCTCGTCAAAAGTTTGGTTAACTCAGTCACACAGATGGTTAATATTGCAACAGTATCCACAGTTAAAGCTGTTGAAAATCCAGAGCTACTTTCACCTCAGGTACTACAAGCAGGTCTGCATCAAAGCCTTGAGAAATTCACTTCGTCCATCCAAAACTCACCATTTCACCTTGGCTTCCAGAAAGTTACTGCGCCTTCAGTTTCAACTTGTTCCTTGCATCTACAAGATGAAAAAATTGATCACAGTTAGCTGAATGAATATTGATCCTTACTCACTTGAAACTTGAAGAGATTAATTTGTACTTGAGAAAAGAAAAATGAAGATGATATCAACATGAAGGTGAAAGTATCTTTATAATCCCTACCATCTTCAATTTTTTCCTAAACTCTTCTTCAATGTTCTCACCAACCTTTTCAATCATTTTTTCTTTCTTTCTATCTAATTCTATTTATAAATTGGCTAAGAAACTTTAAAACTAAATTTT ATGGAGAGAAATTTTACGGTATCCAAACGCCTTCTCTTCGATCGTCGCTACGGTTGGGTGATTGATGAGTGGAAAGACCCTTCGGAAGAAGCTTTGGCCGGTGGCCGAGGAATGTTCTGCATAGTGCCTCTCGTCAAAAGTTTGGTTAACTCAGTCACACAGATGGTTAATATTGCAACAGTATCCACAGTTAAAGCTGTTGAAAATCCAGAGCTACTTTCACCTCAGGTACTACAAGCAGGTCTGCATCAAAGCCTTGAGAAATTCACTTCGTCCATCCAAAACTCACCATTTCACCTTGGCTTCCAGAAAGTTACTGCGCCTTCAGTTTCAACTTGTTCCTTGCATCTACAAGATGAAAAAATTGATCACAGTTAG MERNFTVSKRLLFDRRYGWVIDEWKDPSEEALAGGRGMFCIVPLVKSLVNSVTQMVNIATVSTVKAVENPELLSPQVLQAGLHQSLEKFTSSIQNSPFHLGFQKVTAPSVSTCSLHLQDEKIDHS* Homology
BLAST of CsGy5G030200 vs. NCBI nr
Match: XP_011656083.1 (uncharacterized protein LOC105435624 [Cucumis sativus]) HSP 1 Score: 250 bits (638), Expect = 1.39e-83 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0
BLAST of CsGy5G030200 vs. NCBI nr
Match: XP_008459584.1 (PREDICTED: uncharacterized protein LOC103498670 [Cucumis melo]) HSP 1 Score: 235 bits (600), Expect = 8.72e-78 Identity = 117/125 (93.60%), Postives = 120/125 (96.00%), Query Frame = 0
BLAST of CsGy5G030200 vs. NCBI nr
Match: XP_038889417.1 (uncharacterized protein LOC120079329 isoform X1 [Benincasa hispida]) HSP 1 Score: 216 bits (549), Expect = 6.36e-70 Identity = 109/131 (83.21%), Postives = 116/131 (88.55%), Query Frame = 0
BLAST of CsGy5G030200 vs. NCBI nr
Match: KAA0039289.1 (uncharacterized protein E6C27_scaffold64G00830 [Cucumis melo var. makuwa]) HSP 1 Score: 195 bits (495), Expect = 5.33e-62 Identity = 100/125 (80.00%), Postives = 104/125 (83.20%), Query Frame = 0
BLAST of CsGy5G030200 vs. NCBI nr
Match: KAG6592354.1 (hypothetical protein SDJN03_14700, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 194 bits (494), Expect = 1.54e-61 Identity = 96/120 (80.00%), Postives = 105/120 (87.50%), Query Frame = 0
BLAST of CsGy5G030200 vs. ExPASy TrEMBL
Match: A0A0A0KUT1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G649290 PE=4 SV=1) HSP 1 Score: 250 bits (638), Expect = 6.74e-84 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0
BLAST of CsGy5G030200 vs. ExPASy TrEMBL
Match: A0A1S3CAM7 (uncharacterized protein LOC103498670 OS=Cucumis melo OX=3656 GN=LOC103498670 PE=4 SV=1) HSP 1 Score: 235 bits (600), Expect = 4.22e-78 Identity = 117/125 (93.60%), Postives = 120/125 (96.00%), Query Frame = 0
BLAST of CsGy5G030200 vs. ExPASy TrEMBL
Match: A0A5A7TDE2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G00830 PE=4 SV=1) HSP 1 Score: 195 bits (495), Expect = 2.58e-62 Identity = 100/125 (80.00%), Postives = 104/125 (83.20%), Query Frame = 0
BLAST of CsGy5G030200 vs. ExPASy TrEMBL
Match: A0A6J1EC20 (uncharacterized protein LOC111432700 OS=Cucurbita moschata OX=3662 GN=LOC111432700 PE=4 SV=1) HSP 1 Score: 193 bits (490), Expect = 3.03e-61 Identity = 98/131 (74.81%), Postives = 108/131 (82.44%), Query Frame = 0
BLAST of CsGy5G030200 vs. ExPASy TrEMBL
Match: A0A6J1IB95 (uncharacterized protein LOC111471949 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471949 PE=4 SV=1) HSP 1 Score: 191 bits (484), Expect = 1.98e-60 Identity = 92/124 (74.19%), Postives = 104/124 (83.87%), Query Frame = 0
BLAST of CsGy5G030200 vs. TAIR 10
Match: AT2G21195.1 (unknown protein; Has 28 Blast hits to 28 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 90.9 bits (224), Expect = 7.9e-19 Identity = 39/52 (75.00%), Postives = 46/52 (88.46%), Query Frame = 0
BLAST of CsGy5G030200 vs. TAIR 10
Match: AT2G21195.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.9 bits (154), Expect = 1.0e-10 Identity = 27/39 (69.23%), Postives = 33/39 (84.62%), Query Frame = 0
BLAST of CsGy5G030200 vs. TAIR 10
Match: AT2G21195.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 62.4 bits (150), Expect = 3.0e-10 Identity = 26/48 (54.17%), Postives = 38/48 (79.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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