CsGy5G026450 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G026450
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	DNL-type domain-containing protein
Location	Gy14Chr5: 30339164 .. 30341466 (-)
RNA-Seq Expression	CsGy5G026450
Synteny	CsGy5G026450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAAATTATAAATCATGTGGAACTTGCGGAGGATCCCGCCGTTTTGGTATAAGTTACCTGCGACAGAAATCTGTTCTCTTTAACTCGGAGCTCCGTTCCCGGTCTTCCATGGCAGCGAGGCGGTTTCTCTCTCTCGCTTTTCGTCATCGGTTACAGACCTCTCCTTCGCTCGGTGAGCTTCCATTTCTCTTCTGTCAGTTAAAACCCTAATATCAGTCCATTTTTCTTACTCCTATCACCTATTTATCATCTGTTCCTGATTTGCTCTGATGCTTTGCTTCAAACTTTGGTCGTTCCGGAATCAACGGCACCTGTACAATTAATGGGTGATTTTGATTTTCTGTGTTCATAGGAATATCTTGTGTTGAGTTGGTAAAATTAGTGTTTTTTCTATTGTTTTCGACTTCTCAAAGACAATTAAGTGGAAGTTATGTGTATCTATGATCTAATTGGTTGAATATCATTGAAGAGTTCTCTCTATTGTTTTGTATGGTTTCTTTCTGATATATAAAATAGATTCATTTCTTTGGTTTAAATCACCACTGAACCCAAAAATTCTAGCGGATGGATAACAGTGAATTTAATTTTATATCAACGCTTAAAGCTAAACATATAGTTAGAAGGATATATGGGAAGAATTTTTTGCCCGTGTATTTCGTATTAATGCTCCAGTTCAAGTGGGGTTTGAACATACAAATCTCCTTAGTTATTGAGTTTTGAGCTTTGTAATAGACAATTTGAAATCTGGCTGATTTCACTATAGCAGTGAAACGAGGCTGTGTAAAAGGCTGCATTATAGTTTTGAAACAACTTGTGACGTTTCAAGTGCTAAAGTTTGAGGAAAGTTTCTTGTAGATTTACAAAATATTCTTGGATTCATTTCATTTGAATGTATTTAAACTCAGTAGAACTTCCCAGCTGATTGCCTTTTCTTGATGTTTATTATTTTGTACACAACCTTCATCTATCATTTATATTGTCTTATAAAAGTATTTTTTTAACAAACATCTCTCCATTTTATGATTACTTTTGCTCAAACTGCTAACAAGAACAATTTTGATGGCAGAAAGCACTTGCCCAATTCACTCATTTGCAAATTCATGGTTCTTGACTGGGCACAAATTTACGAGAAGAGAAAACCACACTGAGGCAACTCCAGCAATTGCTGAGGATTCTAAAGACAATGAAGACAATAAGTTGAGGCCTATTTCCGATTTGGGCAAACCCCTTCATGAAAACAAGGACGATACTTCTTCTGTGAAGTACTCTGTTCTCTCCAATTTAAAACCATCCCCTAGGCATGACCTTGCCATGATATTCACTTGCAAAGTCTGCGAGACAAGATCAATCAAGACAGTTTGCCGTGAATCATATGAGAAGGGTGTGGTGGTGGCACGTTGCGGTGGATGCAACAATTTACACCTGATTGCTGACCATCTTGGTTGGTTTGGCGAGCCTGGCAGTGTGGAAGACTTCCTGGCTGCTCGTGGTGAGGAAGTTCGCAAAGGTTCTCTCGATTCACTAAGCTTAACTCTTGAAGATTTGGCTGGAAAGACATCCTGAAACGGTTTTGGTTTCTCTGGTTTGAAATTAGAAGCTACTTTCTATATTCGATGTTCGGATAAAAGATATTTCAAGGTTAGTTTTTGCTGTGAAATTGATAAGAAAGAGCACCTGCTGGGAGAAGTTCGGGGATTTGGGGCTGCCTGAAGTACGTACTGCTCCCTTTAAGGTGTGTTTTCATTTTTTCAAACCAATGTTACTCATCTTTAATACCAAATGTTTGGCGCACAAGAAAAACGAAGAAGCTACCAATTATCTGAACTGTTCATCTTTTCGTTGGTCCTCTGTGAAATCATCACCAAACTCGAAATCCTAAGCCGTTTTTTTTTTTTTATCAATATCATTGATTTTAGTTTATAAAGTTTAAGAATATAAACATTACTTCTTTGTATAAACATTTTTATTTGTTAGCAACACTTTCTATCCATGTTTTCCTTTTAATAACCATACTTTCAAGTTTTAACATTATCATTGTTATTCAATATGATAGTGTTTTTTTTTTTTTAACATACAGAATTCAATCAAACAACTCGGATGACCGTCACAATGGGCTATATAGATGACTGCAGATGTCTTTGAATATATCTATTATATAAGCAATTTGTGTAATATTTGTGAAAGTCAATACTGTTCTAAGTTTGGCTTTAATTAGAAGAAGAAAACAGGCATTTACTCTTCCTGAGGCTTATATATTCATATGTTATCTAAATGAATATATATAATTCTTATTTTAACAT

mRNA sequence

ATGCGAAATTATAAATCATGTGGAACTTGCGGAGGATCCCGCCGTTTTGGTATAAGTTACCTGCGACAGAAATCTGTTCTCTTTAACTCGGAGCTCCGTTCCCGGTCTTCCATGGCAGCGAGGCGGTTTCTCTCTCTCGCTTTTCGTCATCGGTTACAGACCTCTCCTTCGCTCGAAAGCACTTGCCCAATTCACTCATTTGCAAATTCATGGTTCTTGACTGGGCACAAATTTACGAGAAGAGAAAACCACACTGAGGCAACTCCAGCAATTGCTGAGGATTCTAAAGACAATGAAGACAATAAGTTGAGGCCTATTTCCGATTTGGGCAAACCCCTTCATGAAAACAAGGACGATACTTCTTCTGTGAAGTACTCTGTTCTCTCCAATTTAAAACCATCCCCTAGGCATGACCTTGCCATGATATTCACTTGCAAAGTCTGCGAGACAAGATCAATCAAGACAGTTTGCCGTGAATCATATGAGAAGGGTGTGGTGGTGGCACGTTGCGGTGGATGCAACAATTTACACCTGATTGCTGACCATCTTGGTTGGTTTGGCGAGCCTGGCAGTGTGGAAGACTTCCTGGCTGCTCGTGGTGAGGAAGTTCGCAAAGGTTCTCTCGATTCACTAAGCTTAACTCTTGAAGATTTGGCTGGAAAGACATCCTGAAACGGTTTTGGTTTCTCTGGTTTGAAATTAGAAGCTACTTTCTATATTCGATGTTCGGATAAAAGATATTTCAAGGTTAGTTTTTGCTGTGAAATTGATAAGAAAGAGCACCTGCTGGGAGAAGTTCGGGGATTTGGGGCTGCCTGAAGTACGTACTGCTCCCTTTAAGAATTCAATCAAACAACTCGGATGACCGTCACAATGGGCTATATAGATGACTGCAGATGTCTTTGAATATATCTATTATATAAGCAATTTGTGTAATATTTGTGAAAGTCAATACTGTTCTAAGTTTGGCTTTAATTAGAAGAAGAAAACAGGCATTTACTCTTCCTGAGGCTTATATATTCATATGTTATCTAAATGAATATATATAATTCTTATTTTAACAT

Coding sequence (CDS)

ATGCGAAATTATAAATCATGTGGAACTTGCGGAGGATCCCGCCGTTTTGGTATAAGTTACCTGCGACAGAAATCTGTTCTCTTTAACTCGGAGCTCCGTTCCCGGTCTTCCATGGCAGCGAGGCGGTTTCTCTCTCTCGCTTTTCGTCATCGGTTACAGACCTCTCCTTCGCTCGAAAGCACTTGCCCAATTCACTCATTTGCAAATTCATGGTTCTTGACTGGGCACAAATTTACGAGAAGAGAAAACCACACTGAGGCAACTCCAGCAATTGCTGAGGATTCTAAAGACAATGAAGACAATAAGTTGAGGCCTATTTCCGATTTGGGCAAACCCCTTCATGAAAACAAGGACGATACTTCTTCTGTGAAGTACTCTGTTCTCTCCAATTTAAAACCATCCCCTAGGCATGACCTTGCCATGATATTCACTTGCAAAGTCTGCGAGACAAGATCAATCAAGACAGTTTGCCGTGAATCATATGAGAAGGGTGTGGTGGTGGCACGTTGCGGTGGATGCAACAATTTACACCTGATTGCTGACCATCTTGGTTGGTTTGGCGAGCCTGGCAGTGTGGAAGACTTCCTGGCTGCTCGTGGTGAGGAAGTTCGCAAAGGTTCTCTCGATTCACTAAGCTTAACTCTTGAAGATTTGGCTGGAAAGACATCCTGA

Protein sequence

MRNYKSCGTCGGSRRFGISYLRQKSVLFNSELRSRSSMAARRFLSLAFRHRLQTSPSLESTCPIHSFANSWFLTGHKFTRRENHTEATPAIAEDSKDNEDNKLRPISDLGKPLHENKDDTSSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCGGCNNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDLAGKTS*

Homology

[Close]

BLAST of CsGy5G026450 vs. ExPASy Swiss-Prot
Match: Q0IH40 (DNL-type zinc finger protein OS=Xenopus laevis OX=8355 GN=dnlz PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.9e-16
Identity = 38/78 (48.72%), Postives = 55/78 (70.51%), Query Frame = 0


Query: 131 LKPSPRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCGGCNNLHLIADHLGWFGE-- 190
           L  +P     +I+TCKVC TRS KT+ + +Y KGVV+ RC GC N H+IAD+LGWF +  
Sbjct: 74  LPAAPSSHYRLIYTCKVCATRSSKTISKVAYHKGVVIVRCPGCENHHIIADNLGWFSDLE 133

Query: 191 -PGSVEDFLAARGEEVRK 206
              ++E+ LAA+GE+V++
Sbjct: 134 GRRNIEEILAAKGEQVQR 151

[Close]

BLAST of CsGy5G026450 vs. ExPASy Swiss-Prot
Match: Q9D113 (DNL-type zinc finger protein OS=Mus musculus OX=10090 GN=Dnlz PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.1e-15
Identity = 40/80 (50.00%), Postives = 56/80 (70.00%), Query Frame = 0


Query: 141 MIFTCKVCETRSIKTVCRESYEKGVVVARCGGCNNLHLIADHLGWFGE---PGSVEDFLA 200
           +++TCKVC TRS K + + +Y +GVV+  C GC N H+IAD+L WF +     ++E+ LA
Sbjct: 75  LVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNLSWFSDLKGKRNIEEILA 134

Query: 201 ARGEEVRKGSLD-SLSLTLE 217
           ARGEEVR+ S D +L L LE
Sbjct: 135 ARGEEVRRVSGDGALELILE 154

[Close]

BLAST of CsGy5G026450 vs. ExPASy Swiss-Prot
Match: Q5SXM8 (DNL-type zinc finger protein OS=Homo sapiens OX=9606 GN=DNLZ PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.7e-14
Identity = 39/87 (44.83%), Postives = 55/87 (63.22%), Query Frame = 0


Query: 141 MIFTCKVCETRSIKTVCRESYEKGVVVARCGGCNNLHLIADHLGWFGE---PGSVEDFLA 200
           +++TCKVC TRS K + + +Y +GVV+  C GC N H+IAD+LGWF +     ++E+ L 
Sbjct: 71  LVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNLGWFSDLNGKRNIEEILT 130

Query: 201 ARGEEV-RKGSLDSLSLTLEDLAGKTS 224
           ARGE+V R     +L L LE     TS
Sbjct: 131 ARGEQVHRVAGEGALELVLEAAGAPTS 157

[Close]

BLAST of CsGy5G026450 vs. ExPASy Swiss-Prot
Match: A1L1P7 (DNL-type zinc finger protein OS=Danio rerio OX=7955 GN=dnlz PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-13
Identity = 33/68 (48.53%), Postives = 49/68 (72.06%), Query Frame = 0


Query: 141 MIFTCKVCETRSIKTVCRESYEKGVVVARCGGCNNLHLIADHLGWFGE---PGSVEDFLA 200
           +++TCKVC TRS+K + + +Y KGVV+  C GC N H+IAD+L WF +     ++E+ LA
Sbjct: 83  LVYTCKVCSTRSMKKISKLAYHKGVVIVTCPGCKNHHVIADNLKWFSDLEGKRNIEEILA 142

Query: 201 ARGEEVRK 206
           A+GE VR+
Sbjct: 143 AKGESVRR 150

[Close]

BLAST of CsGy5G026450 vs. ExPASy Swiss-Prot
Match: Q09759 (Uncharacterized protein C24H6.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC24H6.02c PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.7e-11
Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 122 SVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCGGCNNLHLIAD 181
           SVK S    L+P P ++++  FTC VC TRS     +++Y  G V+ +C  C N HL+AD
Sbjct: 62  SVK-SDADQLQPKPTYNVS--FTCTVCNTRSNHNFSKQAYHNGTVLVQCPKCKNRHLMAD 121

Query: 182 HLGWFGEPG-SVEDFLAARGEEVRKG 207
           HL  F E   ++ED LA +GE  +KG
Sbjct: 122 HLKIFSEERVTIEDILAKKGETFKKG 144

[Close]

BLAST of CsGy5G026450 vs. NCBI nr
Match: XP_004142433.2 (uncharacterized protein LOC101207740 [Cucumis sativus] >KGN52257.1 hypothetical protein Csa_009137 [Cucumis sativus])

HSP 1 Score: 450 bits (1157), Expect = 1.68e-159
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MRNYKSCGTCGGSRRFGISYLRQKSVLFNSELRSRSSMAARRFLSLAFRHRLQTSPSLES 60
           MRNYKSCGTCGGSRRFGISYLRQKSVLFNSELRSRSSMAARRFLSLAFRHRLQTSPSLES
Sbjct: 1   MRNYKSCGTCGGSRRFGISYLRQKSVLFNSELRSRSSMAARRFLSLAFRHRLQTSPSLES 60

Query: 61  TCPIHSFANSWFLTGHKFTRRENHTEATPAIAEDSKDNEDNKLRPISDLGKPLHENKDDT 120
           TCPIHSFANSWFLTGHKFTRRENHTEATPAIAEDSKDNEDNKLRPISDLGKPLHENKDDT
Sbjct: 61  TCPIHSFANSWFLTGHKFTRRENHTEATPAIAEDSKDNEDNKLRPISDLGKPLHENKDDT 120

Query: 121 SSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCGGCNNLHLIA 180
           SSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCGGCNNLHLIA
Sbjct: 121 SSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCGGCNNLHLIA 180

Query: 181 DHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDLAGKTS 223
           DHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDLAGKTS
Sbjct: 181 DHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDLAGKTS 223

[Close]

BLAST of CsGy5G026450 vs. NCBI nr
Match: XP_008446866.1 (PREDICTED: DNL-type zinc finger protein [Cucumis melo] >XP_016900169.1 PREDICTED: DNL-type zinc finger protein [Cucumis melo])

HSP 1 Score: 348 bits (893), Expect = 7.84e-120
Identity = 172/186 (92.47%), Postives = 178/186 (95.70%), Query Frame = 0


Query: 38  MAARRFLSLAFRHRLQTSPSLESTCPIHSFANSWFLTGHKFTRRENHTEATPAIAEDSKD 97
           MAARRFLSLAFRHRLQTSPS ES  P+H FANSWFLTG++F RRE HTEATPAIAE+SKD
Sbjct: 1   MAARRFLSLAFRHRLQTSPSPESASPVHPFANSWFLTGYRFLRRETHTEATPAIAEESKD 60

Query: 98  NEDNKLRPISDLGKPLHENKDDTSSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVC 157
           NED KLRPIS+LG PLHENKDDTSSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVC
Sbjct: 61  NEDTKLRPISELGDPLHENKDDTSSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVC 120

Query: 158 RESYEKGVVVARCGGCNNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLED 217
           RESYEKGVVVARCGGC+NLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLED
Sbjct: 121 RESYEKGVVVARCGGCSNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLED 180

Query: 218 LAGKTS 223
           LAGKTS
Sbjct: 181 LAGKTS 186

[Close]

BLAST of CsGy5G026450 vs. NCBI nr
Match: XP_038891384.1 (DNL-type zinc finger protein isoform X1 [Benincasa hispida])

HSP 1 Score: 327 bits (838), Expect = 2.02e-111
Identity = 166/188 (88.30%), Postives = 173/188 (92.02%), Query Frame = 0


Query: 38  MAARRFLSLAFRHRLQTSPSL--ESTCPIHSFANSWFLTGHKFTRRENHTEATPAIAEDS 97
           M +RRFLSLA R+R +TS SL  ESTC IH FANSWFLTGH+F+RR N T ATPAIAEDS
Sbjct: 1   MTSRRFLSLALRYRSKTSLSLPHESTCGIHPFANSWFLTGHRFSRRGNQTVATPAIAEDS 60

Query: 98  KDNEDNKLRPISDLGKPLHENKDDTSSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKT 157
           KDNEDNKL PISDLG PLHENKDDTS+VKYSVLSNLK SPRHDLAMIFTCKVCETRSIKT
Sbjct: 61  KDNEDNKLTPISDLGDPLHENKDDTSAVKYSVLSNLKSSPRHDLAMIFTCKVCETRSIKT 120

Query: 158 VCRESYEKGVVVARCGGCNNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTL 217
           VCRESYEKGVVVARCGGC+NLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTL
Sbjct: 121 VCRESYEKGVVVARCGGCSNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTL 180

Query: 218 EDLAGKTS 223
           EDLAGK S
Sbjct: 181 EDLAGKKS 188

[Close]

BLAST of CsGy5G026450 vs. NCBI nr
Match: KAA0034710.1 (DNL-type zinc finger protein [Cucumis melo var. makuwa] >TYK09263.1 DNL-type zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 310 bits (794), Expect = 8.82e-105
Identity = 151/164 (92.07%), Postives = 157/164 (95.73%), Query Frame = 0


Query: 60  STCPIHSFANSWFLTGHKFTRRENHTEATPAIAEDSKDNEDNKLRPISDLGKPLHENKDD 119
           S  P+H FANSWFLTG++F RRE HTEATPAIAE+SKDNED KLRPIS+LG PLHENKDD
Sbjct: 21  SASPVHPFANSWFLTGYRFLRRETHTEATPAIAEESKDNEDTKLRPISELGDPLHENKDD 80

Query: 120 TSSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCGGCNNLHLI 179
           TSSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCGGC+NLHLI
Sbjct: 81  TSSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCGGCSNLHLI 140

Query: 180 ADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDLAGKTS 223
           ADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDLAGKTS
Sbjct: 141 ADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDLAGKTS 184

[Close]

BLAST of CsGy5G026450 vs. NCBI nr
Match: XP_038891386.1 (DNL-type zinc finger protein isoform X2 [Benincasa hispida])

HSP 1 Score: 308 bits (790), Expect = 1.99e-104
Identity = 152/165 (92.12%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 59  ESTCPIHSFANSWFLTGHKFTRRENHTEATPAIAEDSKDNEDNKLRPISDLGKPLHENKD 118
           ESTC IH FANSWFLTGH+F+RR N T ATPAIAEDSKDNEDNKL PISDLG PLHENKD
Sbjct: 3   ESTCGIHPFANSWFLTGHRFSRRGNQTVATPAIAEDSKDNEDNKLTPISDLGDPLHENKD 62

Query: 119 DTSSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCGGCNNLHL 178
           DTS+VKYSVLSNLK SPRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCGGC+NLHL
Sbjct: 63  DTSAVKYSVLSNLKSSPRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCGGCSNLHL 122

Query: 179 IADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDLAGKTS 223
           IADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDLAGK S
Sbjct: 123 IADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDLAGKKS 167

[Close]

BLAST of CsGy5G026450 vs. ExPASy TrEMBL
Match: A0A0A0KUY3 (DNL-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G622720 PE=4 SV=1)

HSP 1 Score: 450 bits (1157), Expect = 8.14e-160
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MRNYKSCGTCGGSRRFGISYLRQKSVLFNSELRSRSSMAARRFLSLAFRHRLQTSPSLES 60
           MRNYKSCGTCGGSRRFGISYLRQKSVLFNSELRSRSSMAARRFLSLAFRHRLQTSPSLES
Sbjct: 1   MRNYKSCGTCGGSRRFGISYLRQKSVLFNSELRSRSSMAARRFLSLAFRHRLQTSPSLES 60

Query: 61  TCPIHSFANSWFLTGHKFTRRENHTEATPAIAEDSKDNEDNKLRPISDLGKPLHENKDDT 120
           TCPIHSFANSWFLTGHKFTRRENHTEATPAIAEDSKDNEDNKLRPISDLGKPLHENKDDT
Sbjct: 61  TCPIHSFANSWFLTGHKFTRRENHTEATPAIAEDSKDNEDNKLRPISDLGKPLHENKDDT 120

Query: 121 SSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCGGCNNLHLIA 180
           SSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCGGCNNLHLIA
Sbjct: 121 SSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCGGCNNLHLIA 180

Query: 181 DHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDLAGKTS 223
           DHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDLAGKTS
Sbjct: 181 DHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDLAGKTS 223

[Close]

BLAST of CsGy5G026450 vs. ExPASy TrEMBL
Match: A0A1S4DW08 (DNL-type zinc finger protein OS=Cucumis melo OX=3656 GN=LOC103489455 PE=4 SV=1)

HSP 1 Score: 348 bits (893), Expect = 3.80e-120
Identity = 172/186 (92.47%), Postives = 178/186 (95.70%), Query Frame = 0


Query: 38  MAARRFLSLAFRHRLQTSPSLESTCPIHSFANSWFLTGHKFTRRENHTEATPAIAEDSKD 97
           MAARRFLSLAFRHRLQTSPS ES  P+H FANSWFLTG++F RRE HTEATPAIAE+SKD
Sbjct: 1   MAARRFLSLAFRHRLQTSPSPESASPVHPFANSWFLTGYRFLRRETHTEATPAIAEESKD 60

Query: 98  NEDNKLRPISDLGKPLHENKDDTSSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVC 157
           NED KLRPIS+LG PLHENKDDTSSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVC
Sbjct: 61  NEDTKLRPISELGDPLHENKDDTSSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVC 120

Query: 158 RESYEKGVVVARCGGCNNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLED 217
           RESYEKGVVVARCGGC+NLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLED
Sbjct: 121 RESYEKGVVVARCGGCSNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLED 180

Query: 218 LAGKTS 223
           LAGKTS
Sbjct: 181 LAGKTS 186

[Close]

BLAST of CsGy5G026450 vs. ExPASy TrEMBL
Match: A0A5D3CBP4 (DNL-type zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002580 PE=4 SV=1)

HSP 1 Score: 310 bits (794), Expect = 4.27e-105
Identity = 151/164 (92.07%), Postives = 157/164 (95.73%), Query Frame = 0


Query: 60  STCPIHSFANSWFLTGHKFTRRENHTEATPAIAEDSKDNEDNKLRPISDLGKPLHENKDD 119
           S  P+H FANSWFLTG++F RRE HTEATPAIAE+SKDNED KLRPIS+LG PLHENKDD
Sbjct: 21  SASPVHPFANSWFLTGYRFLRRETHTEATPAIAEESKDNEDTKLRPISELGDPLHENKDD 80

Query: 120 TSSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCGGCNNLHLI 179
           TSSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCGGC+NLHLI
Sbjct: 81  TSSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCGGCSNLHLI 140

Query: 180 ADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDLAGKTS 223
           ADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDLAGKTS
Sbjct: 141 ADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDLAGKTS 184

[Close]

BLAST of CsGy5G026450 vs. ExPASy TrEMBL
Match: A0A6J1CEE4 (uncharacterized protein LOC111009963 OS=Momordica charantia OX=3673 GN=LOC111009963 PE=4 SV=1)

HSP 1 Score: 288 bits (736), Expect = 3.09e-96
Identity = 146/185 (78.92%), Postives = 159/185 (85.95%), Query Frame = 0


Query: 40  ARRFLSLAFRHRLQTSPSLESTCPIHSFANSWFLTGHKFTRRENHTEATPAIAEDSKDNE 99
           ARR  SL  R+R QTS   E TC IH FANS FLTGH+F RR N T A PA+AEDSKDNE
Sbjct: 2   ARRIFSLVSRYRSQTSLPHECTCQIHPFANSRFLTGHRFLRRGNQTIANPAVAEDSKDNE 61

Query: 100 DNKLRPISDLGKPLHENK-DDTSSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVCR 159
           DNKL+P+SD   PL + K DD+++VKYSV+SNLK SPRHDLAMIFTCKVCETRSIKTVCR
Sbjct: 62  DNKLQPVSDSIDPLDQEKNDDSAAVKYSVISNLKMSPRHDLAMIFTCKVCETRSIKTVCR 121

Query: 160 ESYEKGVVVARCGGCNNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLEDL 219
            SYEKGVVVARCGGCNNLHLIADHLGWFGEPGS+EDFLAARGEEVRKGS+DSLSLTL+DL
Sbjct: 122 SSYEKGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLAARGEEVRKGSVDSLSLTLDDL 181

Query: 220 AGKTS 223
           AGK S
Sbjct: 182 AGKKS 186

[Close]

BLAST of CsGy5G026450 vs. ExPASy TrEMBL
Match: A0A6J1GYW7 (uncharacterized protein C24H6.02c OS=Cucurbita moschata OX=3662 GN=LOC111458755 PE=4 SV=1)

HSP 1 Score: 278 bits (710), Expect = 1.99e-92
Identity = 145/186 (77.96%), Postives = 153/186 (82.26%), Query Frame = 0


Query: 38  MAARRFLSLAFRHRLQTSPSLESTCPIHSFANSWFLTGHKFTRRENHTEATPAIAEDSKD 97
           MA RR LSLA R+R QTS   E TC IH FANSWFLTG +F  R N + A  +IAEDSKD
Sbjct: 1   MATRRILSLALRYRSQTSLPHERTCQIHPFANSWFLTGQRFWIRGNQSLANSSIAEDSKD 60

Query: 98  NEDNKLRPISDLGKPLHENKDDTSSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVC 157
           NE N +          HENKDD S+VKYSV+SNLK SPRHDLAMIFTCKVCETRSIKTVC
Sbjct: 61  NERNSV----------HENKDDGSAVKYSVMSNLKSSPRHDLAMIFTCKVCETRSIKTVC 120

Query: 158 RESYEKGVVVARCGGCNNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLTLED 217
           RESYEKGVVVARCGGCNNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSL+LED
Sbjct: 121 RESYEKGVVVARCGGCNNLHLIADHLGWFGEPGSVEDFLAARGEEVRKGSLDSLSLSLED 176

Query: 218 LAGKTS 223
           LAGK S
Sbjct: 181 LAGKNS 176

[Close]

BLAST of CsGy5G026450 vs. TAIR 10
Match: AT3G54826.1 (Zim17-type zinc finger protein )

HSP 1 Score: 156.0 bits (393), Expect = 3.6e-38
Identity = 97/207 (46.86%), Postives = 122/207 (58.94%), Query Frame = 0


Query: 19  SYLRQKSVLFNSELR---SRSSMAARRFLSLAFRHRLQTSPSLESTCPIHSFANSWFLTG 78
           ++   +SV F   LR   +   +A RR LSL F ++    P  + +    S +NS F   
Sbjct: 14  NFTENRSVEFLLSLRLSMAARLLALRRALSL-FSNQQHRFPLSQVSTEQLSLSNSLFSRS 73

Query: 79  HKFTRR-ENHTEATPAIAEDSKDNEDNKLRPISDLGK-PLHENKDDTSSVKYSVLSNLKP 138
           H + R  +          E S  N  N     ++  K P      +   VKY   S LK 
Sbjct: 74  HVYGRLFQRQLSVIREANEASVTNVCNSSNSATESAKVPSPATPSEEMMVKYK--SQLKI 133

Query: 139 SPRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCGGCNNLHLIADHLGWFGEPGSVE 198
           +PRHD  M+FTCKVC+TRS+K   RESYE GVVV RCGGC+NLHLIAD  GWFGEPGSVE
Sbjct: 134 NPRHDFMMVFTCKVCDTRSMKMASRESYENGVVVVRCGGCDNLHLIADRRGWFGEPGSVE 193

Query: 199 DFLAARGEEVRKGSLDSLSLTLEDLAG 221
           DFLA++GEE +KGS+DSL+LT EDLAG
Sbjct: 194 DFLASQGEEFKKGSMDSLNLTPEDLAG 217

[Close]

BLAST of CsGy5G026450 vs. TAIR 10
Match: AT1G68730.1 (Zim17-type zinc finger protein )

HSP 1 Score: 52.4 bits (124), Expect = 5.6e-07
Identity = 38/132 (28.79%), Postives = 60/132 (45.45%), Query Frame = 0


Query: 60  STCPIH-SFANSWFLTGHKFTRREN-----HTEATPAIAEDSKDNEDNK-LRPISDLGKP 119
           +T PI+  F+ S++     F +++N     H   T  + E     + N+       L   
Sbjct: 20  NTKPINFHFSASFYKPPRPFYKQQNPISALHRSKTTRVIEVVTPKQRNRSFSVFGSLADD 79

Query: 120 LHENKDDTSSVKYSVLSNLKPSPRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCGG 179
              N D+ S+    V S     PR  L + FTC  C  R+ + + R +YEKG+V  +C G
Sbjct: 80  SKLNPDEESNDSAEVASIDIKLPRRSLQVEFTCNSCGERTKRLINRHAYEKGLVFVQCAG 139

Query: 180 CNNLHLIADHLG 185
           C   H + D+LG
Sbjct: 140 CLKHHKLVDNLG 151

The following BLAST results are available for this feature:

BLAST of CsGy5G026450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0IH40	2.9e-16	48.72	DNL-type zinc finger protein OS=Xenopus laevis OX=8355 GN=dnlz PE=2 SV=1	[more]
Q9D113	7.1e-15	50.00	DNL-type zinc finger protein OS=Mus musculus OX=10090 GN=Dnlz PE=1 SV=1	[more]
Q5SXM8	2.7e-14	44.83	DNL-type zinc finger protein OS=Homo sapiens OX=9606 GN=DNLZ PE=1 SV=1	[more]
A1L1P7	1.0e-13	48.53	DNL-type zinc finger protein OS=Danio rerio OX=7955 GN=dnlz PE=2 SV=1	[more]
Q09759	4.7e-11	43.02	Uncharacterized protein C24H6.02c OS=Schizosaccharomyces pombe (strain 972 / ATC...	[more]

BLAST of CsGy5G026450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142433.2	1.68e-159	100.00	uncharacterized protein LOC101207740 [Cucumis sativus] >KGN52257.1 hypothetical ...	[more]
XP_008446866.1	7.84e-120	92.47	PREDICTED: DNL-type zinc finger protein [Cucumis melo] >XP_016900169.1 PREDICTED...	[more]
XP_038891384.1	2.02e-111	88.30	DNL-type zinc finger protein isoform X1 [Benincasa hispida]	[more]
KAA0034710.1	8.82e-105	92.07	DNL-type zinc finger protein [Cucumis melo var. makuwa] >TYK09263.1 DNL-type zin...	[more]
XP_038891386.1	1.99e-104	92.12	DNL-type zinc finger protein isoform X2 [Benincasa hispida]	[more]

BLAST of CsGy5G026450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUY3	8.14e-160	100.00	DNL-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G622720 PE...	[more]
A0A1S4DW08	3.80e-120	92.47	DNL-type zinc finger protein OS=Cucumis melo OX=3656 GN=LOC103489455 PE=4 SV=1	[more]
A0A5D3CBP4	4.27e-105	92.07	DNL-type zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A6J1CEE4	3.09e-96	78.92	uncharacterized protein LOC111009963 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A6J1GYW7	1.99e-92	77.96	uncharacterized protein C24H6.02c OS=Cucurbita moschata OX=3662 GN=LOC111458755 ...	[more]

BLAST of CsGy5G026450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54826.1	3.6e-38	46.86	Zim17-type zinc finger protein	[more]
AT1G68730.1	5.6e-07	28.79	Zim17-type zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007853	Zinc finger, DNL-type	PFAM	PF05180	zf-DNL	coord: 141..201 e-value: 6.2E-25 score: 86.9
IPR007853	Zinc finger, DNL-type	PROSITE	PS51501	ZF_DNL	coord: 134..223 score: 17.621099
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..119
None	No IPR available	PANTHER	PTHR20922:SF13	DNL-TYPE ZINC FINGER PROTEIN	coord: 75..221
IPR024158	Mitochondrial import protein TIM15	PANTHER	PTHR20922	UNCHARACTERIZED	coord: 75..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G026450.2	CsGy5G026450.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0030150	protein import into mitochondrial matrix
biological_process	GO:0050821	protein stabilization
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0008270	zinc ion binding