CsGy5G026110 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCTTTCTTTCAATGCATTCTACAAGTTTACGTAAAACATCCCCATTATCACTTCCCTAATTTCCTCATATTCTCAAATAATTAAGAACAAAAACAACCTTGATTCCTACTTCGTCCAAGCTTTTGATTTTCTCTTTATATACATTGTTATATATAATCATCAATGGCCACTACCAAGGCGGCTGGTTTGGTGATCTTGGTTTTGTTAATGCTGGATTTGGCTCTTGCTGCTAGGTTCTTCAGGGGTTATGGAGGTGGTAGTGGTGGCGGTGGAGGTGGGGGAGAAGGTTCAGGGCCTTGGTCGGGTTCGGGATATGGTTCAGGGTATGGCTCGGGTTATGGTTCGGGATATGGAGGTGAAGAAGGCTATTCTAGATATGGAGATGAAGGCCGCTATGGACCGTATGGGCCTTATAGTGGGGGCGGAGGTGGCGGTGGAGGAGGTGGTGGTGGAGGTGGCGGCAGTGCAATTGGAGCCGAGTATGGTCGTGGATTTGGGGCGGGAAGTGGGTCGGGGTACGGGTCTGGTGGTGGAGTAGGACGTGGTGGAGGAGGTGGCGGTGGCAGCGGTGGAGGAGGTTCGGGAATTGGAAGTGGGTCAGGATATGGCTCGGGATATGGAAGTGGAGGAGGCTATGGAAGTGGTGGAGGTAGGGGTGGAGGAGGGGGTGGAGGAGGGGTGGTGGAGGCGGTGAGGGGATGGGCGGCGAGGGTCTGGGTATGGTTCAGGATATGGGTCAGGGTACGGAGGAGGTGGTGATGAAGAATCACCATGAACGTAATTCGATGATACCTACAAACGAATTTATCTTTCAAACCATTTGAAATAAAAAAGTGCAATGGCAACTTCTACTTAGAAAGATGATATTAGAATTTGATGGGTTGCGATGGTCCAAAATATAAATTCCAAGTATTACCAAATCCCCTTTCATCTAAATAAATAAATTGCTATCGACCTGTTTTTTTCATTGACGTGCAATTTAATGAATTCTATTCTCTTATTATATATATATATTAAAACATTCGAGTCTATCATCTCTTAAAGAAAACAGATCTGTTAATCAATTAGTAATGTTCATTTTAACATTTCATGACTTGATATGAAAACACAACTACACATATAACGATAGGAAATACTCAACAATTAATTGGTAGTAAAATTAGAAGCTCCCCTATGAACTAATTTACAATGAGTTAGTTTTCA TCCTTTCTTTCAATGCATTCTACAAGTTTACGTAAAACATCCCCATTATCACTTCCCTAATTTCCTCATATTCTCAAATAATTAAGAACAAAAACAACCTTGATTCCTACTTCGTCCAAGCTTTTGATTTTCTCTTTATATACATTGTTATATATAATCATCAATGGCCACTACCAAGGCGGCTGGTTTGGTGATCTTGGTTTTGTTAATGCTGGATTTGGCTCTTGCTGCTAGGTTCTTCAGGGGTTATGGAGGTGGTAGTGGTGGCGGTGGAGGTGGGGGAGAAGGTTCAGGGCCTTGGTCGGGTTCGGGATATGGTTCAGGGTATGGCTCGGGTTATGGTTCGGGATATGGAGGTGAAGAAGGCTATTCTAGATATGGAGATGAAGGCCGCTATGGACCGTATGGGCCTTATAGTGGGGGCGGAGGTGGCGGTGGAGGAGGTGGTGGTGGAGGTGGCGGCAGTGCAATTGGAGCCGAGTATGGTCGTGGATTTGGGGCGGGAAGTGGGTCGGGGTACGGGTCTGGTGGTGGAGTAGGACGTGGTGGAGGAGGTGGCGGTGGCAGCGGTGGAGGAGGTTCGGGAATTGGAAGTGGGTCAGGATATGGCTCGGGATATGGAAGTGGAGGAGGCTATGGAAGTGGTGGAGGTAGGGGTGGAGGAGGGGGTGGAGGAGGGGTGGTGGAGGCGGTGAGGGGATGGGCGGCGAGGGTCTGGGTATGGTTCAGGATATGGGTCAGGGTACGGAGGAGGTGGTGATGAAGAATCACCATGAACGTAATTCGATGATACCTACAAACGAATTTATCTTTCAAACCATTTGAAATAAAAAAGTGCAATGGCAACTTCTACTTAGAAAGATGATATTAGAATTTGATGGGTTGCGATGGTCCAAAATATAAATTCCAAGTATTACCAAATCCCCTTTCATCTAAATAAATAAATTGCTATCGACCTGTTTTTTTCATTGACGTGCAATTTAATGAATTCTATTCTCTTATTATATATATATATTAAAACATTCGAGTCTATCATCTCTTAAAGAAAACAGATCTGTTAATCAATTAGTAATGTTCATTTTAACATTTCATGACTTGATATGAAAACACAACTACACATATAACGATAGGAAATACTCAACAATTAATTGGTAGTAAAATTAGAAGCTCCCCTATGAACTAATTTACAATGAGTTAGTTTTCA ATGGCCACTACCAAGGCGGCTGGTTTGGTGATCTTGGTTTTGTTAATGCTGGATTTGGCTCTTGCTGCTAGGTTCTTCAGGGGTTATGGAGGTGGTAGTGGTGGCGGTGGAGGTGGGGGAGAAGGTTCAGGGCCTTGGTCGGGTTCGGGATATGGTTCAGGGTATGGCTCGGGTTATGGTTCGGGATATGGAGGTGAAGAAGGCTATTCTAGATATGGAGATGAAGGCCGCTATGGACCGTATGGGCCTTATAGTGGGGGCGGAGGTGGCGGTGGAGGAGGTGGTGGTGGAGGTGGCGGCAGTGCAATTGGAGCCGAGTATGGTCGTGGATTTGGGGCGGGAAGTGGGTCGGGGTACGGGTCTGGTGGTGGAGTAGGACGTGGTGGAGGAGGTGGCGGTGGCAGCGGTGGAGGAGGTTCGGGAATTGGAAGTGGGTCAGGATATGGCTCGGGATATGGAAGTGGAGGAGGCTATGGAAGTGGTGGAGGTAGGGGTGGAGGAGGGGGTGGAGGAGGGGTGGTGGAGGCGGTGAGGGGATGGGCGGCGAGGGTCTGGGTATGGTTCAGGATATGGGTCAGGGTACGGAGGAGGTGGTGA MATTKAAGLVILVLLMLDLALAARFFRGYGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGYGGEEGYSRYGDEGRYGPYGPYSGGGGGGGGGGGGGGGSAIGAEYGRGFGAGSGSGYGSGGGVGRGGGGGGGSGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGVVEAVRGWAARVWVWFRIWVRVRRRW* Homology
BLAST of CsGy5G026110 vs. ExPASy Swiss-Prot
Match: P0C5C7 (Glycine-rich cell wall structural protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=GRP0.9 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 3.6e-10 Identity = 108/180 (60.00%), Postives = 114/180 (63.33%), Query Frame = 0
BLAST of CsGy5G026110 vs. ExPASy Swiss-Prot
Match: A3C5A7 (Glycine-rich cell wall structural protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRP0.9 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 3.6e-10 Identity = 108/180 (60.00%), Postives = 114/180 (63.33%), Query Frame = 0
BLAST of CsGy5G026110 vs. ExPASy Swiss-Prot
Match: A2ZJC9 (Putative glycine-rich cell wall structural protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=GRP-1 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 4.4e-08 Identity = 100/170 (58.82%), Postives = 107/170 (62.94%), Query Frame = 0
BLAST of CsGy5G026110 vs. ExPASy Swiss-Prot
Match: Q9SIH2 (Glycine-rich protein DOT1 OS=Arabidopsis thaliana OX=3702 GN=DOT1 PE=2 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 7.7e-05 Identity = 89/153 (58.17%), Postives = 95/153 (62.09%), Query Frame = 0
BLAST of CsGy5G026110 vs. ExPASy Swiss-Prot
Match: A3CG83 (Putative glycine-rich cell wall structural protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRP-1 PE=3 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 7.7e-05 Identity = 96/170 (56.47%), Postives = 103/170 (60.59%), Query Frame = 0
BLAST of CsGy5G026110 vs. NCBI nr
Match: XP_031741764.1 (glycine-rich cell wall structural protein 2 [Cucumis sativus]) HSP 1 Score: 233 bits (593), Expect = 2.44e-74 Identity = 172/175 (98.29%), Postives = 172/175 (98.29%), Query Frame = 0
BLAST of CsGy5G026110 vs. NCBI nr
Match: XP_008447018.1 (PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo]) HSP 1 Score: 199 bits (506), Expect = 5.57e-61 Identity = 160/177 (90.40%), Postives = 162/177 (91.53%), Query Frame = 0
BLAST of CsGy5G026110 vs. NCBI nr
Match: XP_023550088.1 (glycine-rich cell wall structural protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 179 bits (454), Expect = 3.81e-53 Identity = 152/181 (83.98%), Postives = 156/181 (86.19%), Query Frame = 0
BLAST of CsGy5G026110 vs. NCBI nr
Match: KAG6601193.1 (hypothetical protein SDJN03_06426, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 174 bits (441), Expect = 3.52e-51 Identity = 151/182 (82.97%), Postives = 155/182 (85.16%), Query Frame = 0
BLAST of CsGy5G026110 vs. NCBI nr
Match: XP_022990525.1 (putative glycine-rich cell wall structural protein 1 [Cucurbita maxima]) HSP 1 Score: 171 bits (434), Expect = 3.68e-50 Identity = 152/181 (83.98%), Postives = 156/181 (86.19%), Query Frame = 0
BLAST of CsGy5G026110 vs. ExPASy TrEMBL
Match: A0A0A0KUV7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622440 PE=4 SV=1) HSP 1 Score: 233 bits (593), Expect = 1.11e-74 Identity = 172/175 (98.29%), Postives = 172/175 (98.29%), Query Frame = 0
BLAST of CsGy5G026110 vs. ExPASy TrEMBL
Match: A0A1S3BGF1 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC103489565 PE=4 SV=1) HSP 1 Score: 199 bits (506), Expect = 2.70e-61 Identity = 160/177 (90.40%), Postives = 162/177 (91.53%), Query Frame = 0
BLAST of CsGy5G026110 vs. ExPASy TrEMBL
Match: A0A6J1JQB8 (putative glycine-rich cell wall structural protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111487374 PE=4 SV=1) HSP 1 Score: 171 bits (434), Expect = 1.78e-50 Identity = 152/181 (83.98%), Postives = 156/181 (86.19%), Query Frame = 0
BLAST of CsGy5G026110 vs. ExPASy TrEMBL
Match: A0A6J1CF67 (putative glycine-rich cell wall structural protein 1 OS=Momordica charantia OX=3673 GN=LOC111010186 PE=4 SV=1) HSP 1 Score: 149 bits (375), Expect = 5.26e-42 Identity = 136/177 (76.84%), Postives = 145/177 (81.92%), Query Frame = 0
BLAST of CsGy5G026110 vs. ExPASy TrEMBL
Match: A0A6J1H1H1 (glycine-rich cell wall structural protein 1.0-like OS=Cucurbita moschata OX=3662 GN=LOC111458712 PE=4 SV=1) HSP 1 Score: 143 bits (361), Expect = 4.49e-40 Identity = 116/139 (83.45%), Postives = 119/139 (85.61%), Query Frame = 0
BLAST of CsGy5G026110 vs. TAIR 10
Match: AT2G36120.1 (Glycine-rich protein family ) HSP 1 Score: 48.9 bits (115), Expect = 5.5e-06 Identity = 89/153 (58.17%), Postives = 95/153 (62.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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