CsGy5G024395 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G024395
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr5: 28997214 .. 28997481 (+)
RNA-Seq ExpressionCsGy5G024395
SyntenyCsGy5G024395
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGCTGTGCATATTGCCAGTGGAGGAGATATCGAGATGGATAGTACCAAATCCCAGTTAATATACCTCGGTTAAACCACAATTTTATTTCTTAAAAAACTGGTGCTACATCGTTGTCTATGAAGGCAAAAGTTGCCTACCATGGATACATATCTTAGCAATGGCTTTACTTTACGCTCTTAACAGTGACGGTAGTAATGAGAAACAGGCAGAGTCTTTAAAAATCTGGCAGTTCTGCTCTGATTCTCCTTCACTTTTCTTCTAA

mRNA sequence

ATGTCTGCTGTGCATATTGCCAGTGGAGGAGATATCGAGATGGATAGTACCAAATCCCAGTTAATATACCTCGCAATGGCTTTACTTTACGCTCTTAACAGTGACGGTAGTAATGAGAAACAGGCAGAGTCTTTAAAAATCTGGCAGTTCTGCTCTGATTCTCCTTCACTTTTCTTCTAA

Coding sequence (CDS)

ATGTCTGCTGTGCATATTGCCAGTGGAGGAGATATCGAGATGGATAGTACCAAATCCCAGTTAATATACCTCGCAATGGCTTTACTTTACGCTCTTAACAGTGACGGTAGTAATGAGAAACAGGCAGAGTCTTTAAAAATCTGGCAGTTCTGCTCTGATTCTCCTTCACTTTTCTTCTAA

Protein sequence

MSAVHIASGGDIEMDSTKSQLIYLAMALLYALNSDGSNEKQAESLKIWQFCSDSPSLFF*
Homology
[Close]
BLAST of CsGy5G024395 vs. NCBI nr
Match: KGN52043.1 (hypothetical protein Csa_008918 [Cucumis sativus])

HSP 1 Score: 120 bits (300), Expect = 4.52e-34
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0 

Query: 1  MSAVHIASGGDIEMDSTKSQLIYLAMALLYALNSDGSNEKQAESLKIWQFCSDSPSLFF 59
          MSAVHIASGGDIEMDSTKSQLIYLAMALLYALNSDGSNEKQAESLKIWQFCSDSPSLFF
Sbjct: 1  MSAVHIASGGDIEMDSTKSQLIYLAMALLYALNSDGSNEKQAESLKIWQFCSDSPSLFF 59

[Close]
BLAST of CsGy5G024395 vs. ExPASy TrEMBL
Match: A0A0A0KR36 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608310 PE=4 SV=1)

HSP 1 Score: 120 bits (300), Expect = 2.19e-34
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0 

Query: 1  MSAVHIASGGDIEMDSTKSQLIYLAMALLYALNSDGSNEKQAESLKIWQFCSDSPSLFF 59
          MSAVHIASGGDIEMDSTKSQLIYLAMALLYALNSDGSNEKQAESLKIWQFCSDSPSLFF
Sbjct: 1  MSAVHIASGGDIEMDSTKSQLIYLAMALLYALNSDGSNEKQAESLKIWQFCSDSPSLFF 59

The following BLAST results are available for this feature:
BLAST of CsGy5G024395 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy5G024395 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN52043.14.52e-34100.00hypothetical protein Csa_008918 [Cucumis sativus][more]
BLAST of CsGy5G024395 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KR362.19e-34100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608310 PE=4 SV=1[more]
BLAST of CsGy5G024395 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G024395.1CsGy5G024395.1mRNA