CsGy5G022910 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G022910
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Homeobox protein
Location	Gy14Chr5: 28095083 .. 28096753 (-)
RNA-Seq Expression	CsGy5G022910
Synteny	CsGy5G022910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTATGTCTATAAGCAAACCCAATTCACCAAACTTCTTCTTCAACTTCAACTTTTTTCTCCATCTTTGTCCTTTACGTTTTTGCATCAATTTATATATAATTTGCATTACTTCATGAATCCCATCTCTCTCCACCTCTGAAACTTTCAACATTACCACACCACTCCACACACAATTCTACATTTTTCTCACTTGTTCAACCGAAAAAAAAAACAGCTAAAAGGCTTGGATTTTTCACCCTCGTTTGAGAATCCCACATGAACCCATTTCTCAATTATGGATTCTGAAACAACCCATTTTCTATCAAAACCTGAAGCTTCTTCTCTCCCCTGTTTCTGGGTCTCTGATTCTTGCTCTTCCATGAAAGGAGAAGGAACGACTCTTGGTGGGAAGAAAAGAAGGCTCTCAGTTGATCAAGTTCGGTTGCTTGAGAAGAATTTTAATGATGAGAATAAGCTTGAACATGAGAGGAAAGTTCAAATTGCTGAGGAGATTGGGTTGAGGCCTCGTCAAGTTGCGGTTTGGTTTCAGAATCGAAGGGCTCGATCAAAGATGAAAAGAATTGAGAGTGATTATGAATGTTTGAGTGCTGAATATGATAAGCTTAAGAGTGATTTTGACAGTCTTCTTAATATGAATCATGAACTCAAAGCAGAGGTATGGACTCTCTGTTTATGGCATTTAAAACTTCAGATCTGTTTAGATATTATCTTCATTGTCGTTTTGTTTCAGTCCCATTCTTATTTATTGTCCACTTTTTGTTCACTTTTTAATGCTCACTCATCTTCCTAAATATGACTTCAATATTTCAAAATCAATTTGGAGTTTAATTTTGTACTTTTAAACGTGATTTTCATACCATCAACATTGATTTTAAAGGATTAAAGATATATCAAGAGTGTGTACATCGAATACTTTAAGATGTTTTTCACTCGAAAACAACTTTTATTAATAGTTATCAAGTTAGAGAAAATGTTTCATTTTCTACTAGTTGGATCAACTTACACTTTTATCAAAGTCTTTCAAACGATTTCTACTAAGCGTATCAACTTAGAGAAAATGTGTTCTATTTCACAACCACTTTTATCCAAAGTGTAATCTGGTTTTCTACCAGGTTGATCAACTAAGAACAACATGGGCTGCTGTTGAGAAGATGAAGAATCATTTTGAACCAGTCGGAGTTGAAGCCATGGATTCATCAGTCACAAAACTTGAAAAAGCAAACGCAAAGACAATGGGTGAAATTTTGTATAAAGTTCAAATGGGTTCATCGAGACATGAAGAAGGTAGCCTGAGTTCAAGCAAAAGTGATGGTTTTTATTCTGAAAGCCCCACAAGGGATAACCAATCAAAGTCAGCCAATTTCTTGCAAGATGAAGAAGATGAGTTAGGTTGCTTAGGGAAACTAGAAGATGAACTTTCTGCCAATGAGCTCATGAATTCCTTTAACATTCTTAGTAGTGCAGTTGAAAATCAATCTTTCTGCTTTTGGTCTTAGTAGATATCGAGTATAATAATTCTCAGTAAAATGTTCGAATCTACTGAAGATTAGAAATAAAAGAGTGGAAGTGATCATGAGTATGACTTCTTCATTTACTGTCATTTTGAGTAATTATCTAAATTATGTCTACTTCAAAACCAGCAAAAAGATCCATTTCGACAAAGAAATAAC

mRNA sequence

TCTATGTCTATAAGCAAACCCAATTCACCAAACTTCTTCTTCAACTTCAACTTTTTTCTCCATCTTTGTCCTTTACGTTTTTGCATCAATTTATATATAATTTGCATTACTTCATGAATCCCATCTCTCTCCACCTCTGAAACTTTCAACATTACCACACCACTCCACACACAATTCTACATTTTTCTCACTTGTTCAACCGAAAAAAAAAACAGCTAAAAGGCTTGGATTTTTCACCCTCGTTTGAGAATCCCACATGAACCCATTTCTCAATTATGGATTCTGAAACAACCCATTTTCTATCAAAACCTGAAGCTTCTTCTCTCCCCTGTTTCTGGGTCTCTGATTCTTGCTCTTCCATGAAAGGAGAAGGAACGACTCTTGGTGGGAAGAAAAGAAGGCTCTCAGTTGATCAAGTTCGGTTGCTTGAGAAGAATTTTAATGATGAGAATAAGCTTGAACATGAGAGGAAAGTTCAAATTGCTGAGGAGATTGGGTTGAGGCCTCGTCAAGTTGCGGTTTGGTTTCAGAATCGAAGGGCTCGATCAAAGATGAAAAGAATTGAGAGTGATTATGAATGTTTGAGTGCTGAATATGATAAGCTTAAGAGTGATTTTGACAGTCTTCTTAATATGAATCATGAACTCAAAGCAGAGGTTGATCAACTAAGAACAACATGGGCTGCTGTTGAGAAGATGAAGAATCATTTTGAACCAGTCGGAGTTGAAGCCATGGATTCATCAGTCACAAAACTTGAAAAAGCAAACGCAAAGACAATGGGTGAAATTTTGTATAAAGTTCAAATGGGTTCATCGAGACATGAAGAAGGTAGCCTGAGTTCAAGCAAAAGTGATGGTTTTTATTCTGAAAGCCCCACAAGGGATAACCAATCAAAGTCAGCCAATTTCTTGCAAGATGAAGAAGATGAGTTAGGTTGCTTAGGGAAACTAGAAGATGAACTTTCTGCCAATGAGCTCATGAATTCCTTTAACATTCTTAGTAGTGCAGTTGAAAATCAATCTTTCTGCTTTTGGTCTTAGTAGATATCGAGTATAATAATTCTCAGTAAAATGTTCGAATCTACTGAAGATTAGAAATAAAAGAGTGGAAGTGATCATGAGTATGACTTCTTCATTTACTGTCATTTTGAGTAATTATCTAAATTATGTCTACTTCAAAACCAGCAAAAAGATCCATTTCGACAAAGAAATAAC

Coding sequence (CDS)

ATGGATTCTGAAACAACCCATTTTCTATCAAAACCTGAAGCTTCTTCTCTCCCCTGTTTCTGGGTCTCTGATTCTTGCTCTTCCATGAAAGGAGAAGGAACGACTCTTGGTGGGAAGAAAAGAAGGCTCTCAGTTGATCAAGTTCGGTTGCTTGAGAAGAATTTTAATGATGAGAATAAGCTTGAACATGAGAGGAAAGTTCAAATTGCTGAGGAGATTGGGTTGAGGCCTCGTCAAGTTGCGGTTTGGTTTCAGAATCGAAGGGCTCGATCAAAGATGAAAAGAATTGAGAGTGATTATGAATGTTTGAGTGCTGAATATGATAAGCTTAAGAGTGATTTTGACAGTCTTCTTAATATGAATCATGAACTCAAAGCAGAGGTTGATCAACTAAGAACAACATGGGCTGCTGTTGAGAAGATGAAGAATCATTTTGAACCAGTCGGAGTTGAAGCCATGGATTCATCAGTCACAAAACTTGAAAAAGCAAACGCAAAGACAATGGGTGAAATTTTGTATAAAGTTCAAATGGGTTCATCGAGACATGAAGAAGGTAGCCTGAGTTCAAGCAAAAGTGATGGTTTTTATTCTGAAAGCCCCACAAGGGATAACCAATCAAAGTCAGCCAATTTCTTGCAAGATGAAGAAGATGAGTTAGGTTGCTTAGGGAAACTAGAAGATGAACTTTCTGCCAATGAGCTCATGAATTCCTTTAACATTCTTAGTAGTGCAGTTGAAAATCAATCTTTCTGCTTTTGGTCTTAG

Protein sequence

MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGTTLGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLSAEYDKLKSDFDSLLNMNHELKAEVDQLRTTWAAVEKMKNHFEPVGVEAMDSSVTKLEKANAKTMGEILYKVQMGSSRHEEGSLSSSKSDGFYSESPTRDNQSKSANFLQDEEDELGCLGKLEDELSANELMNSFNILSSAVENQSFCFWS*

Homology

[Close]

BLAST of CsGy5G022910 vs. ExPASy Swiss-Prot
Match: P46668 (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana OX=3702 GN=ATHB-6 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-25
Identity = 59/98 (60.20%), Postives = 75/98 (76.53%), Query Frame = 0


Query: 36  LGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKR 95
           L  KKRRLS++QV+ LEKNF  ENKLE ERKV++A+E+GL+PRQVAVWFQNRRAR K K+
Sbjct: 59  LSEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 118

Query: 96  IESDYECLSAEYDKLKSDFDSLLNMNHELKAEVDQLRT 134
           +E DY  L  +YD L+ +FDSL   N  L  E+ +L+T
Sbjct: 119 LEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKT 156

[Close]

BLAST of CsGy5G022910 vs. ExPASy Swiss-Prot
Match: A2XD08 (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. indica OX=39946 GN=HOX21 PE=2 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 2.3e-25
Identity = 60/111 (54.05%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 29  MKGEGTTLGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRR 88
           +  +G+  G KKRRL+V+QVR LEKNF   NKLE ERK+Q+A  +GL+PRQVA+WFQNRR
Sbjct: 114 LSDDGSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRR 173

Query: 89  ARSKMKRIESDYECLSAEYDKLKSDFDSLLNMNHELKAEVDQLRTTWAAVE 140
           AR K K++E DY+ L  + D +K++ D+LLN N +L+AE+  L+   AA E
Sbjct: 174 ARWKTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVALKGREAASE 224

[Close]

BLAST of CsGy5G022910 vs. ExPASy Swiss-Prot
Match: Q8S7W9 (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX21 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.3e-25
Identity = 60/111 (54.05%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 29  MKGEGTTLGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRR 88
           +  +G+  G KKRRL+V+QVR LEKNF   NKLE ERK+Q+A  +GL+PRQVA+WFQNRR
Sbjct: 120 LSDDGSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRR 179

Query: 89  ARSKMKRIESDYECLSAEYDKLKSDFDSLLNMNHELKAEVDQLRTTWAAVE 140
           AR K K++E DY+ L  + D +K++ D+LLN N +L+AE+  L+   AA E
Sbjct: 180 ARWKTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVALKGREAASE 230

[Close]

BLAST of CsGy5G022910 vs. ExPASy Swiss-Prot
Match: Q940J1 (Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana OX=3702 GN=ATHB-16 PE=2 SV=2)

HSP 1 Score: 114.4 bits (285), Expect = 1.9e-24
Identity = 59/109 (54.13%), Postives = 75/109 (68.81%), Query Frame = 0


Query: 36  LGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKR 95
           L  KKRRL VDQV+ LEKNF  ENKLE ERK ++A+E+GL+PRQVAVWFQNRRAR K K+
Sbjct: 56  LSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQ 115

Query: 96  IESDYECLSAEYDKLKSDFDSLLNMNHELKAEVDQLRTTWAAVEKMKNH 145
           +E DY  L  +YD L+ +FDSL   N  L  E+ +++      E   N+
Sbjct: 116 LEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEEDNNNN 164

[Close]

BLAST of CsGy5G022910 vs. ExPASy Swiss-Prot
Match: Q00466 (Homeobox-leucine zipper protein HAT7 OS=Arabidopsis thaliana OX=3702 GN=HAT7 PE=2 SV=4)

HSP 1 Score: 110.9 bits (276), Expect = 2.1e-23
Identity = 57/102 (55.88%), Postives = 77/102 (75.49%), Query Frame = 0


Query: 31  GEGTTLGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRAR 90
           G    LG KK+RL+++QVR LEK+F   NKLE ERK+Q+A+ +GL+PRQ+A+WFQNRRAR
Sbjct: 107 GSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRAR 166

Query: 91  SKMKRIESDYECLSAEYDKLKSDFDSLLNMNHELKAEVDQLR 133
            K K++E DY+ L  ++D LKSD DSLL  N +L AE+  L+
Sbjct: 167 WKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAELVALK 208

[Close]

BLAST of CsGy5G022910 vs. NCBI nr
Match: XP_004135200.1 (homeobox-leucine zipper protein HAT5 [Cucumis sativus] >KGN51881.1 hypothetical protein Csa_008673 [Cucumis sativus])

HSP 1 Score: 494 bits (1272), Expect = 5.37e-176
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGTTLGGKKRRLSVDQVRLLEKNFNDENK 60
           MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGTTLGGKKRRLSVDQVRLLEKNFNDENK
Sbjct: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGTTLGGKKRRLSVDQVRLLEKNFNDENK 60

Query: 61  LEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLSAEYDKLKSDFDSLLNM 120
           LEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLSAEYDKLKSDFDSLLNM
Sbjct: 61  LEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLSAEYDKLKSDFDSLLNM 120

Query: 121 NHELKAEVDQLRTTWAAVEKMKNHFEPVGVEAMDSSVTKLEKANAKTMGEILYKVQMGSS 180
           NHELKAEVDQLRTTWAAVEKMKNHFEPVGVEAMDSSVTKLEKANAKTMGEILYKVQMGSS
Sbjct: 121 NHELKAEVDQLRTTWAAVEKMKNHFEPVGVEAMDSSVTKLEKANAKTMGEILYKVQMGSS 180

Query: 181 RHEEGSLSSSKSDGFYSESPTRDNQSKSANFLQDEEDELGCLGKLEDELSANELMNSFNI 240
           RHEEGSLSSSKSDGFYSESPTRDNQSKSANFLQDEEDELGCLGKLEDELSANELMNSFNI
Sbjct: 181 RHEEGSLSSSKSDGFYSESPTRDNQSKSANFLQDEEDELGCLGKLEDELSANELMNSFNI 240

Query: 241 LSSAVENQSFCFWS 254
           LSSAVENQSFCFWS
Sbjct: 241 LSSAVENQSFCFWS 254

[Close]

BLAST of CsGy5G022910 vs. NCBI nr
Match: XP_008446309.1 (PREDICTED: homeobox-leucine zipper protein ATHB-16 [Cucumis melo])

HSP 1 Score: 453 bits (1166), Expect = 7.71e-160
Identity = 240/255 (94.12%), Postives = 246/255 (96.47%), Query Frame = 0


Query: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGTTLGGKKRRLSVDQVRLLEKNFNDENK 60
           MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGT LGGKKRRLSVDQVRLLEKNFNDENK
Sbjct: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGT-LGGKKRRLSVDQVRLLEKNFNDENK 60

Query: 61  LEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLSAEYDKLKSDFDSLLNM 120
           LEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECL+AEYDKLKSDFDSLLNM
Sbjct: 61  LEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLNAEYDKLKSDFDSLLNM 120

Query: 121 NHELKAEVDQLRTTWAAVEKMKNHFEPVGVEAMDSSVTKLEKANAKTMGEILYKVQMGSS 180
           NHELKAEVDQLR  WAA+EKMKNHFEPVGVEAM SSVT+LEKA AKTMGEILY+VQMGSS
Sbjct: 121 NHELKAEVDQLRAKWAAMEKMKNHFEPVGVEAMVSSVTELEKAKAKTMGEILYEVQMGSS 180

Query: 181 RHE-EGSLSSSKSDGFYSESPTRDNQSKSANFLQDEEDELGCLGKLEDELSANELMNSFN 240
           RHE EGSLSSSKSD FYSESPTR+NQSKSANFLQDEEDELG L KLEDELSA+ELMNSFN
Sbjct: 181 RHELEGSLSSSKSDCFYSESPTRENQSKSANFLQDEEDELGYLEKLEDELSADELMNSFN 240

Query: 241 ILSSAVENQSFCFWS 254
           ILSSAVENQSFCFWS
Sbjct: 241 ILSSAVENQSFCFWS 254

[Close]

BLAST of CsGy5G022910 vs. NCBI nr
Match: XP_038892732.1 (homeobox-leucine zipper protein ATHB-54 [Benincasa hispida])

HSP 1 Score: 406 bits (1044), Expect = 2.98e-141
Identity = 218/254 (85.83%), Postives = 227/254 (89.37%), Query Frame = 0


Query: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGTTLGGKKRRLSVDQVRLLEKNFNDENK 60
           MDSETTHFL K EASSLPCF VSD CSSMKGEG   GGKKRRL+VDQVRLLEKNFNDE K
Sbjct: 1   MDSETTHFLPKAEASSLPCFLVSDFCSSMKGEGNQ-GGKKRRLTVDQVRLLEKNFNDEIK 60

Query: 61  LEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLSAEYDKLKSDFDSLLNM 120
           LEHERKVQIAEEIGLRPRQVAVWFQNRRARSK KRIESDYE LS EYDKLK+DFDSLL +
Sbjct: 61  LEHERKVQIAEEIGLRPRQVAVWFQNRRARSKTKRIESDYESLSVEYDKLKNDFDSLLKV 120

Query: 121 NHELKAEVDQLRTTWAAVEKMKNHFEPVGVEAMDSSVTKLEKANAKTMGEILYKVQMGSS 180
           N ELKAEVDQLR  WAA EK KN FEPV VEAMDSSVT+L KAN KTM EILYKVQ+GS 
Sbjct: 121 NQELKAEVDQLRDKWAASEKKKNSFEPVEVEAMDSSVTELGKANTKTMAEILYKVQLGSY 180

Query: 181 RHEEGSLSSSKSDGFYSESPTRDNQSKSANFLQDEEDELGCLGKLEDELSANELMNSFNI 240
           R EEGSLSSSKSDGFYSESPTR+NQSKS NFLQ+EEDELG LGKLEDELSANELM+SFNI
Sbjct: 181 RQEEGSLSSSKSDGFYSESPTRENQSKSGNFLQEEEDELGYLGKLEDELSANELMDSFNI 240

Query: 241 LSSAVENQSFCFWS 254
           LS+AVENQS CFWS
Sbjct: 241 LSNAVENQSLCFWS 253

[Close]

BLAST of CsGy5G022910 vs. NCBI nr
Match: KAA0034384.1 (homeobox-leucine zipper protein ATHB-16 [Cucumis melo var. makuwa] >TYK15535.1 homeobox-leucine zipper protein ATHB-16 [Cucumis melo var. makuwa])

HSP 1 Score: 395 bits (1015), Expect = 2.86e-137
Identity = 212/227 (93.39%), Postives = 218/227 (96.04%), Query Frame = 0


Query: 29  MKGEGTTLGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRR 88
           MKGEGT LGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRR
Sbjct: 1   MKGEGT-LGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRR 60

Query: 89  ARSKMKRIESDYECLSAEYDKLKSDFDSLLNMNHELKAEVDQLRTTWAAVEKMKNHFEPV 148
           ARSKMKRIESDYECL+AEYDKLKSDFDSLLNMNHELKAEVDQLR  WAA+EKMKNHFEPV
Sbjct: 61  ARSKMKRIESDYECLNAEYDKLKSDFDSLLNMNHELKAEVDQLRAKWAAMEKMKNHFEPV 120

Query: 149 GVEAMDSSVTKLEKANAKTMGEILYKVQMGSSRHE-EGSLSSSKSDGFYSESPTRDNQSK 208
           GVEAM SSVT+LEKA AKTMGEILY+VQMGSSRHE EGSLSSSKSD FYSESPTR+NQSK
Sbjct: 121 GVEAMVSSVTELEKAKAKTMGEILYEVQMGSSRHELEGSLSSSKSDCFYSESPTRENQSK 180

Query: 209 SANFLQDEEDELGCLGKLEDELSANELMNSFNILSSAVENQSFCFWS 254
           SANFLQDEEDELG L KLEDELSA+ELMNSFNILSSAVENQSFCFWS
Sbjct: 181 SANFLQDEEDELGYLEKLEDELSADELMNSFNILSSAVENQSFCFWS 226

[Close]

BLAST of CsGy5G022910 vs. NCBI nr
Match: XP_023537958.1 (homeobox-leucine zipper protein HOX20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 325 bits (834), Expect = 1.79e-109
Identity = 181/264 (68.56%), Postives = 205/264 (77.65%), Query Frame = 0


Query: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGT--------TLGGKKRRLSVDQVRLLE 60
           MDS+TTHFL  PE  SLP  W+SDSCSSM+GE +          GGKKRRL++DQVR+LE
Sbjct: 1   MDSKTTHFLPLPE--SLPSLWISDSCSSMEGEFSQPQVKADRNRGGKKRRLTLDQVRMLE 60

Query: 61  KNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLSAEYDKLKS 120
           + FN ENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSK K+IE DYE L+AEYDKLK+
Sbjct: 61  RTFNAENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKTKKIEIDYESLNAEYDKLKN 120

Query: 121 DFDSLLNMNHELKAEVDQLRTTWAAVEKMKNHFEPVGVEAMDSSVTKLEKANAKTMGEIL 180
           DFDSLL +NHELKAEVDQLR  WAA EKMKN +EPVG                       
Sbjct: 121 DFDSLLKVNHELKAEVDQLRDKWAATEKMKNPYEPVGD---------------------F 180

Query: 181 YKVQMGSSRHEEGSLSSSKSDGFYSESPTRDNQSKSANFLQDEE--DELGCLGKLEDELS 240
           YKV+MGSSR E+GS SSSKSD FY+ESPTR+NQS+S NFL+DEE  DELG LG LEDELS
Sbjct: 181 YKVEMGSSRQEQGSRSSSKSDVFYAESPTRENQSRSGNFLRDEEEDDELGYLGILEDELS 240

Query: 241 ANELMNSFNILSSAVENQSFCFWS 254
           A+ELM+SFN++SSA E+QSFCFWS
Sbjct: 241 ADELMDSFNVMSSAAEDQSFCFWS 241

[Close]

BLAST of CsGy5G022910 vs. ExPASy TrEMBL
Match: A0A0A0KVU6 (Homeobox protein OS=Cucumis sativus OX=3659 GN=Csa_5G604260 PE=4 SV=1)

HSP 1 Score: 494 bits (1272), Expect = 2.60e-176
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGTTLGGKKRRLSVDQVRLLEKNFNDENK 60
           MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGTTLGGKKRRLSVDQVRLLEKNFNDENK
Sbjct: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGTTLGGKKRRLSVDQVRLLEKNFNDENK 60

Query: 61  LEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLSAEYDKLKSDFDSLLNM 120
           LEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLSAEYDKLKSDFDSLLNM
Sbjct: 61  LEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLSAEYDKLKSDFDSLLNM 120

Query: 121 NHELKAEVDQLRTTWAAVEKMKNHFEPVGVEAMDSSVTKLEKANAKTMGEILYKVQMGSS 180
           NHELKAEVDQLRTTWAAVEKMKNHFEPVGVEAMDSSVTKLEKANAKTMGEILYKVQMGSS
Sbjct: 121 NHELKAEVDQLRTTWAAVEKMKNHFEPVGVEAMDSSVTKLEKANAKTMGEILYKVQMGSS 180

Query: 181 RHEEGSLSSSKSDGFYSESPTRDNQSKSANFLQDEEDELGCLGKLEDELSANELMNSFNI 240
           RHEEGSLSSSKSDGFYSESPTRDNQSKSANFLQDEEDELGCLGKLEDELSANELMNSFNI
Sbjct: 181 RHEEGSLSSSKSDGFYSESPTRDNQSKSANFLQDEEDELGCLGKLEDELSANELMNSFNI 240

Query: 241 LSSAVENQSFCFWS 254
           LSSAVENQSFCFWS
Sbjct: 241 LSSAVENQSFCFWS 254

[Close]

BLAST of CsGy5G022910 vs. ExPASy TrEMBL
Match: A0A1S3BER7 (homeobox-leucine zipper protein ATHB-16 OS=Cucumis melo OX=3656 GN=LOC103489083 PE=4 SV=1)

HSP 1 Score: 453 bits (1166), Expect = 3.73e-160
Identity = 240/255 (94.12%), Postives = 246/255 (96.47%), Query Frame = 0


Query: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGTTLGGKKRRLSVDQVRLLEKNFNDENK 60
           MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGT LGGKKRRLSVDQVRLLEKNFNDENK
Sbjct: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGT-LGGKKRRLSVDQVRLLEKNFNDENK 60

Query: 61  LEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLSAEYDKLKSDFDSLLNM 120
           LEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECL+AEYDKLKSDFDSLLNM
Sbjct: 61  LEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLNAEYDKLKSDFDSLLNM 120

Query: 121 NHELKAEVDQLRTTWAAVEKMKNHFEPVGVEAMDSSVTKLEKANAKTMGEILYKVQMGSS 180
           NHELKAEVDQLR  WAA+EKMKNHFEPVGVEAM SSVT+LEKA AKTMGEILY+VQMGSS
Sbjct: 121 NHELKAEVDQLRAKWAAMEKMKNHFEPVGVEAMVSSVTELEKAKAKTMGEILYEVQMGSS 180

Query: 181 RHE-EGSLSSSKSDGFYSESPTRDNQSKSANFLQDEEDELGCLGKLEDELSANELMNSFN 240
           RHE EGSLSSSKSD FYSESPTR+NQSKSANFLQDEEDELG L KLEDELSA+ELMNSFN
Sbjct: 181 RHELEGSLSSSKSDCFYSESPTRENQSKSANFLQDEEDELGYLEKLEDELSADELMNSFN 240

Query: 241 ILSSAVENQSFCFWS 254
           ILSSAVENQSFCFWS
Sbjct: 241 ILSSAVENQSFCFWS 254

[Close]

BLAST of CsGy5G022910 vs. ExPASy TrEMBL
Match: A0A5D3CVI2 (Homeobox-leucine zipper protein ATHB-16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00270 PE=4 SV=1)

HSP 1 Score: 395 bits (1015), Expect = 1.39e-137
Identity = 212/227 (93.39%), Postives = 218/227 (96.04%), Query Frame = 0


Query: 29  MKGEGTTLGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRR 88
           MKGEGT LGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRR
Sbjct: 1   MKGEGT-LGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRR 60

Query: 89  ARSKMKRIESDYECLSAEYDKLKSDFDSLLNMNHELKAEVDQLRTTWAAVEKMKNHFEPV 148
           ARSKMKRIESDYECL+AEYDKLKSDFDSLLNMNHELKAEVDQLR  WAA+EKMKNHFEPV
Sbjct: 61  ARSKMKRIESDYECLNAEYDKLKSDFDSLLNMNHELKAEVDQLRAKWAAMEKMKNHFEPV 120

Query: 149 GVEAMDSSVTKLEKANAKTMGEILYKVQMGSSRHE-EGSLSSSKSDGFYSESPTRDNQSK 208
           GVEAM SSVT+LEKA AKTMGEILY+VQMGSSRHE EGSLSSSKSD FYSESPTR+NQSK
Sbjct: 121 GVEAMVSSVTELEKAKAKTMGEILYEVQMGSSRHELEGSLSSSKSDCFYSESPTRENQSK 180

Query: 209 SANFLQDEEDELGCLGKLEDELSANELMNSFNILSSAVENQSFCFWS 254
           SANFLQDEEDELG L KLEDELSA+ELMNSFNILSSAVENQSFCFWS
Sbjct: 181 SANFLQDEEDELGYLEKLEDELSADELMNSFNILSSAVENQSFCFWS 226

[Close]

BLAST of CsGy5G022910 vs. ExPASy TrEMBL
Match: A0A6J1DBJ2 (homeobox-leucine zipper protein ATHB-16 OS=Momordica charantia OX=3673 GN=LOC111019178 PE=4 SV=1)

HSP 1 Score: 325 bits (833), Expect = 2.63e-109
Identity = 180/264 (68.18%), Postives = 208/264 (78.79%), Query Frame = 0


Query: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGE--------GTTLGGKKRRLSVDQVRLLE 60
           MDSETT F+ + E +S    W+S+S SSM+G              GKKRRL+VDQVRLLE
Sbjct: 1   MDSETTLFVPEAETNS-QSLWISNSGSSMEGRFLQEQADGARNSAGKKRRLTVDQVRLLE 60

Query: 61  KNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLSAEYDKLKS 120
           +NFN ENKLEHERKVQ+AEEIGLRPRQVAVWFQNRRARSK K+IE DYE L+AEY KLK 
Sbjct: 61  RNFNVENKLEHERKVQLAEEIGLRPRQVAVWFQNRRARSKTKKIEIDYESLNAEYHKLKK 120

Query: 121 DFDSLLNMNHELKAEVDQLRTTWAAVEKMKNHFEPVGVE--AMDSSVTKLEKANAKTMGE 180
           D+ SL+ +NH+LKAE D+LR  WAA EKM+N  EPV VE  AMDSSVT+L K N  TMGE
Sbjct: 121 DYTSLVKLNHDLKAEADELREKWAAAEKMRNPLEPVEVEVEAMDSSVTELGKPNTSTMGE 180

Query: 181 ILYKVQMGSSRHEEGSLSSSKSDGFYSESPTRDNQSKSANFLQDEEDELGCLGKLEDELS 240
            LY VQMGSSR EEGS SSSKSDGFYSESPT +NQS+S NFL+DEEDELG L KLEDE+ 
Sbjct: 181 DLYNVQMGSSRQEEGSRSSSKSDGFYSESPTMENQSQSDNFLRDEEDELGKLVKLEDEIY 240

Query: 241 ANELMNSFNILSSAVENQSFCFWS 254
           A+E ++SFN +S+AVE+QS CFWS
Sbjct: 241 ADEFIDSFNFISTAVEDQSLCFWS 263

[Close]

BLAST of CsGy5G022910 vs. ExPASy TrEMBL
Match: A0A6J1GYD2 (homeobox-leucine zipper protein ATHB-16-like OS=Cucurbita moschata OX=3662 GN=LOC111458422 PE=4 SV=1)

HSP 1 Score: 322 bits (824), Expect = 2.88e-108
Identity = 179/264 (67.80%), Postives = 204/264 (77.27%), Query Frame = 0


Query: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGT--------TLGGKKRRLSVDQVRLLE 60
           MDS+TTH L  PE  SLP  W+SDSCSSM+GE +          GGKKRRL++DQVR+LE
Sbjct: 1   MDSDTTHCLPLPE--SLPSLWISDSCSSMEGEFSQPQAKADRNRGGKKRRLTLDQVRMLE 60

Query: 61  KNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLSAEYDKLKS 120
           + FN ENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSK K+IE DYE L+AEYDKLK+
Sbjct: 61  RTFNAENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKTKKIEIDYESLNAEYDKLKN 120

Query: 121 DFDSLLNMNHELKAEVDQLRTTWAAVEKMKNHFEPVGVEAMDSSVTKLEKANAKTMGEIL 180
           DFDSLL +NHELKAEV+QLR  WAA EKM N +EPVG                      L
Sbjct: 121 DFDSLLKVNHELKAEVNQLRDKWAATEKMNNPYEPVGA---------------------L 180

Query: 181 YKVQMGSSRHEEGSLSSSKSDGFYSESPTRDNQSKSANFLQDEE--DELGCLGKLEDELS 240
           YKV+MGSSR E+GS SSSKSD FY+ESPTR+NQS+S NFL+DEE  DELG LG LEDELS
Sbjct: 181 YKVEMGSSRQEQGSRSSSKSDVFYAESPTRENQSRSGNFLRDEEEDDELGYLGILEDELS 240

Query: 241 ANELMNSFNILSSAVENQSFCFWS 254
           A+ELM+SFN++SSA E+QSFCFWS
Sbjct: 241 ADELMDSFNVMSSAAEDQSFCFWS 241

[Close]

BLAST of CsGy5G022910 vs. TAIR 10
Match: AT2G22430.1 (homeobox protein 6 )

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-26
Identity = 59/98 (60.20%), Postives = 75/98 (76.53%), Query Frame = 0


Query: 36  LGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKR 95
           L  KKRRLS++QV+ LEKNF  ENKLE ERKV++A+E+GL+PRQVAVWFQNRRAR K K+
Sbjct: 59  LSEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 118

Query: 96  IESDYECLSAEYDKLKSDFDSLLNMNHELKAEVDQLRT 134
           +E DY  L  +YD L+ +FDSL   N  L  E+ +L+T
Sbjct: 119 LEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKT 156

[Close]

BLAST of CsGy5G022910 vs. TAIR 10
Match: AT4G40060.1 (homeobox protein 16 )

HSP 1 Score: 114.4 bits (285), Expect = 1.4e-25
Identity = 59/109 (54.13%), Postives = 75/109 (68.81%), Query Frame = 0


Query: 36  LGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKR 95
           L  KKRRL VDQV+ LEKNF  ENKLE ERK ++A+E+GL+PRQVAVWFQNRRAR K K+
Sbjct: 56  LSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQ 115

Query: 96  IESDYECLSAEYDKLKSDFDSLLNMNHELKAEVDQLRTTWAAVEKMKNH 145
           +E DY  L  +YD L+ +FDSL   N  L  E+ +++      E   N+
Sbjct: 116 LEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEEDNNNN 164

[Close]

BLAST of CsGy5G022910 vs. TAIR 10
Match: AT5G15150.1 (homeobox 3 )

HSP 1 Score: 110.9 bits (276), Expect = 1.5e-24
Identity = 57/102 (55.88%), Postives = 77/102 (75.49%), Query Frame = 0


Query: 31  GEGTTLGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRAR 90
           G    LG KK+RL+++QVR LEK+F   NKLE ERK+Q+A+ +GL+PRQ+A+WFQNRRAR
Sbjct: 107 GSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRAR 166

Query: 91  SKMKRIESDYECLSAEYDKLKSDFDSLLNMNHELKAEVDQLR 133
            K K++E DY+ L  ++D LKSD DSLL  N +L AE+  L+
Sbjct: 167 WKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAELVALK 208

[Close]

BLAST of CsGy5G022910 vs. TAIR 10
Match: AT1G69780.1 (Homeobox-leucine zipper protein family )

HSP 1 Score: 109.8 bits (273), Expect = 3.3e-24
Identity = 53/101 (52.48%), Postives = 77/101 (76.24%), Query Frame = 0


Query: 32  EGTTLGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARS 91
           +G+ +G KKRRL+++QV+ LEKNF   NKLE ERK+Q+A  +GL+PRQ+A+WFQNRRAR 
Sbjct: 78  DGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARW 137

Query: 92  KMKRIESDYECLSAEYDKLKSDFDSLLNMNHELKAEVDQLR 133
           K K++E DY+ L  ++D LK++ D L   N +L+AE+  L+
Sbjct: 138 KTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLK 178

[Close]

BLAST of CsGy5G022910 vs. TAIR 10
Match: AT3G01220.1 (homeobox protein 20 )

HSP 1 Score: 107.5 bits (267), Expect = 1.7e-23
Identity = 54/102 (52.94%), Postives = 76/102 (74.51%), Query Frame = 0


Query: 31  GEGTTLGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRAR 90
           G  T LG KK+RL ++QV+ LEK+F   NKLE ERK+Q+A+ +G++PRQ+A+WFQNRRAR
Sbjct: 79  GAHTMLGEKKKRLQLEQVKALEKSFELGNKLEPERKIQLAKALGMQPRQIAIWFQNRRAR 138

Query: 91  SKMKRIESDYECLSAEYDKLKSDFDSLLNMNHELKAEVDQLR 133
            K +++E DY+ L  +++ LKSD  SLL  N +L AEV  L+
Sbjct: 139 WKTRQLERDYDSLKKQFESLKSDNASLLAYNKKLLAEVMALK 180

The following BLAST results are available for this feature:

BLAST of CsGy5G022910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46668	1.7e-25	60.20	Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana OX=3702 GN=ATHB-6...	[more]
A2XD08	2.3e-25	54.05	Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q8S7W9	2.3e-25	54.05	Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q940J1	1.9e-24	54.13	Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q00466	2.1e-23	55.88	Homeobox-leucine zipper protein HAT7 OS=Arabidopsis thaliana OX=3702 GN=HAT7 PE=...	[more]

BLAST of CsGy5G022910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135200.1	5.37e-176	100.00	homeobox-leucine zipper protein HAT5 [Cucumis sativus] >KGN51881.1 hypothetical ...	[more]
XP_008446309.1	7.71e-160	94.12	PREDICTED: homeobox-leucine zipper protein ATHB-16 [Cucumis melo]	[more]
XP_038892732.1	2.98e-141	85.83	homeobox-leucine zipper protein ATHB-54 [Benincasa hispida]	[more]
KAA0034384.1	2.86e-137	93.39	homeobox-leucine zipper protein ATHB-16 [Cucumis melo var. makuwa] >TYK15535.1 h...	[more]
XP_023537958.1	1.79e-109	68.56	homeobox-leucine zipper protein HOX20-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy5G022910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVU6	2.60e-176	100.00	Homeobox protein OS=Cucumis sativus OX=3659 GN=Csa_5G604260 PE=4 SV=1	[more]
A0A1S3BER7	3.73e-160	94.12	homeobox-leucine zipper protein ATHB-16 OS=Cucumis melo OX=3656 GN=LOC103489083 ...	[more]
A0A5D3CVI2	1.39e-137	93.39	Homeobox-leucine zipper protein ATHB-16 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A6J1DBJ2	2.63e-109	68.18	homeobox-leucine zipper protein ATHB-16 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1GYD2	2.88e-108	67.80	homeobox-leucine zipper protein ATHB-16-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of CsGy5G022910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G22430.1	1.2e-26	60.20	homeobox protein 6	[more]
AT4G40060.1	1.4e-25	54.13	homeobox protein 16	[more]
AT5G15150.1	1.5e-24	55.88	homeobox 3	[more]
AT1G69780.1	3.3e-24	52.48	Homeobox-leucine zipper protein family	[more]
AT3G01220.1	1.7e-23	52.94	homeobox protein 20	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 86..134
None	No IPR available	GENE3D	1.10.10.60		coord: 33..99 e-value: 3.4E-17 score: 63.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..209
None	No IPR available	PANTHER	PTHR24326:SF575	HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT5-LIKE	coord: 36..232
None	No IPR available	PANTHER	PTHR24326	HOMEOBOX-LEUCINE ZIPPER PROTEIN	coord: 36..232
IPR000047	Helix-turn-helix motif	PRINTS	PR00031	HTHREPRESSR	coord: 74..90 score: 58.88 coord: 65..74 score: 31.26
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 37..98 e-value: 7.4E-15 score: 65.4
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 39..92 e-value: 1.9E-15 score: 56.5
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 39..94 score: 16.114748
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 39..92 e-value: 1.25788E-14 score: 64.572
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 94..132 e-value: 8.5E-12 score: 45.1
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 69..92
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 39..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G022910.2	CsGy5G022910.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding