CsGy5G019920 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G019920
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Lipoyl synthase, chloroplastic
Location	Gy14Chr5: 26147321 .. 26151153 (+)
RNA-Seq Expression	CsGy5G019920
Synteny	CsGy5G019920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAATATTTTTGTTTTCTGGTGATTTTAATGGTAAATAGAAAGTTACGTAAGTGTGAATCTGGTAACCAAAACCAACAAGAAAATGAAAAGAACGAAAGCCACCGGCCGTTGGACGGAGTAATCGAAGCACCGTTTTCATTTCAACTCATCCAATTGGCTTCAATTCATCTCAACAATCTCTTCTTCTCTGCTTCCATTTATCCATCTTTCTCAATTCCCATTCCAAAATTCCATATCGATTTCTGTTTCCTGAATTTCACCTCAAAATGATTATTCATTCTTCGCTTTCAATTTCCAATCAGTCTTCTTCTTCTTCTTCTTCTTATTCGCCTCTCCCATTTGTTAAACTCCGCAACTTCTCCAATCATTCCCTCCGTTTTCGCTGGTCGATTTCAGTGATTCGATGTGAAGCTCTCGGTTCCTCTTCTTCAGAGGTGGCGGTGCAGTCCTCTTCTTCTTCTTCGGGGGGAAGTAGGGTTGTGGAATCCCAAGAGGGTTCTTCCAAGGCAGGTCCATATCCCGGAGGAATGGGGCCTTACACCGGCAGAGATCCGAGTGTGAAGAAGCCTGGTTGGTTGAGGCAACGAGCTCCCCAGGGAGAGAAATTTCAGGAGGTCAAAGACTCCTTGTCTCGTTTGAATCTCAATACTGTCTGTGAAGAGGCCCAATGCCCCAACATTGGAGAGGTCTCTCTCTTTTTCTCTCTATCCTCATTACTAGAACTTAACAGAGCTTATTATAGTTAACCTAGAGCACCATTCTCGTAAGCTTGAGTTTATTAGGGAGTATGGTTAACAATTACCTCAAAGTTGTGATTTTTTATTTGAAGTTGTTTTGGTTCTGTTTTTCAGTATGTGGAAGAGCTCATTATAGTTAACTTCATACACTAATTCATTTTAGACCTTGTAATTCAAAGAACTATTCTCAGAAGCTTAAATGTATTTGGGAGTATGGCTAACTGCTACCTTCGAGTAATGATTTTTTATTTGAAGTTGTTTTGGATTTCTGTTTTTCAGTATTTGGATTCTGGTTTTTGTCATTGTCTTAATTGTATTCAGGATTGACTATTATCCTCATGATTCTAATGTTTTGGGCAGTGTTGGAATGGGGGAGGGGATGGAATTGCAACTGCCACAATTATGCTTCTTGGGGATACATGCACACGGGGATGTAGATTTTGTGCTGTAAAGACTAGCAGAAACCCTGCACCTCCTGATCCAATGGAACCACTTAATACTGCTACAGCTATTGCTAGTTGGGGGTATGTATTAACTATCCTGTATCTTCGTAAGAGAATCAACCTTCTTTTTTCCTATTAAGAGTGAATATGAATTGATGTTTATTGAACTTGATCTTGCATTGATAATGTTGACGTATATCTGATTGGCAGAATGTGTCTACATGGTTGTTAAGACTATTCTTCTTTTTCTTCTTTCTTTAGTCTCTTTATCAAATAGTTAACAGAGAAATTTCTCTATGTTCTCATATACTTGTTTTATTAATGGGTATAACTAATTTTTAATAATATTGAATTGTTTTTCTGTATTCTCTTTTAGTGTGGATTACATCGTCTTAACAAGTGTAGACCGTGATGATATTCCTGATGGAGGAAGTGGGCATTTTGCTCAAACAGTTAAAGCAATGAAGGTCGAATAGATTTTTTCTACAATAATTTTTGTCTCCTTATTGATAAACTGAATTGTTGAAAGTTTCTTGGAAAAGTTATTATAAGTCTGATTAGTCTTAGTGAATCTATTCTTTAGGAACTTAAGCCCGAGATAATGGTTGAGTGCTTAACTTCTGATTTCCGAGGTGACTTGAAGGCTGTGGAGACTCTCGTTCACTCAGGGTTAGATGTATTTGCTCACAATGTTGAGACTGTGAAACGGCTTCAAAGAATTGTTAGAGATCCTCGAGCTGGGTAAGATGCATTACCAATTAACTTTGTTTCAGTCCTGTCTCTAGAGGTCAGTGTGTATTGCCTTAAGGTCCTAATTACTATGTATAAAATCATTAGGTGAAAGAAATCCTTAAAGAGATTGAAAAGAAATAATGCCATTTAGCTTCTTATGGATTGTAAGCAAAGAAAACTATGTCCGAAGTTTCTATTTTAGTAATATTTAAGAATACAAAACTTAGACCTGACATTTGTTTTATGAAAAAACGAGGATTTCTCAAAGTCAAATACGCTGTAATTTTGAACACCACCTTGTTTGACAGTTTTTCCAATTTTAGTTTTCTTGCCCATTCTAGTCTACATGGCATCGACCTTCTCATAATAATATGAAAAATTTTATTTGAATGACCGTTCGATTGCATACTTGTTTTAGCACCATTATGGTAAAAGTCCTTTTACAAATTACAACCGGTAACTGGTGGGTGTGATGGAATCTGGTTTTTGTGCTTCCATTCTTTTCAACTAAACTTTGTTTTGAAAATTTTATAAAAGCTAGTAAGCAAGGGCTTCAACCAATATGGAGCTCTTCAGTTTTTTCCTTTAAACTTGTGATCCGTGCCCCACCTAGTCGAGATTCTTACAACCAGTTTGATTCTATGCAGTTATGACCAAAGCTTAGCTGTGCTAAAACATGCAAAGCACAGTAAGGAGGGAATGATAACCAAATCTTCAATCATGCTAGGGCTCGGAGAATCCGATGATGAATTGAAGGAAGCTCTTGCTGATTTAAGGGCCATAGATGTGGATATTCTTACACTTGGGCAGTATTTGCAGGTTTGTTAATACTTATAACTTACTCCAGTCATATTTACTCGCATTGAAAGAGAATTATCCTTGCTTTCAATTTACCTGTCATGGAACCGACTTAAATGAAGACCAGCCAAGTTTGGCCGAGTTTTGACTGTTCTTAGTTTCTTTTCTTTGTTGCTCGTAATGGTTATAGTGTACATCATTTAGGGTGTTCAGTCTGATAACCGCTTAGAGCAACTAGGGCCTGAATCAACTCATGCATATTAGCAGTTTTGAGTAAACTTATTGATGATTTAAATCGTTAATAATAACGAACGGTCGTCCTCTTGCAGCCCACCCCATTACACCTGACTGTCAAAGAATATGTCACACCCGAAAAGTTTGCATTCTGGAAAGAATATGGGGAGTCGATTGGATTCCGATACGTGGCTAGTGGGCCCTTGGTAAGCTTTATATGTAACGTATAATTCTTCCATCACCAAGACAACTGCTTCCATTTCCTAGACCATTATTGCTACCAAAATGAATTCATTTGATGTTTCTTTCCTTTATATGTTCAGGTTCGATCATCATATCGGGCAGGTGAGCTCTTCGTCCAAACCATGGTTAGAGAAAGGGTCAAAAGCTCAACTGCAAATTGAAGGATCAACACTCACAGCTCTGACGTTTTTCGAGTTGTTGGTCATGCTGTAACATAGAAAAAGTGGAGGGAGAGGAATGATTTTCAAAGGAGAAGCCATTGTGGACAACATTGAATACATGGCCAACTTAGCAATGGTATGGCTCTCCGGAGTTGGTTTCTTCTCTCAATTTTTGATGAACTCTGCTTGCTATTTCTCTTGCATTGTCCCCCATTTTTGTCTTGTTTCAAGAACAATTATTTAAAATCTCTCATCATTTTATTTTTTATGATTTTAGATCCAATAGGGGATGGAAGATTCAAACAAAACAACAACAACAATAATACGTTTATTCACTTATCAAAAGCTAAGTTTAGTGTTAATAATAAAATAGTGCACGTTTCAAGTTTTGTTTTGTTGTAATCACGAGTGCGTCTATTTTTTATTCTATGTTCTACCAATGTATTAAAAAATCAAGCCAACATTTAAAAACTAAATAAAAAAA

mRNA sequence

TAAATATTTTTGTTTTCTGGTGATTTTAATGGTAAATAGAAAGTTACGTAAGTGTGAATCTGGTAACCAAAACCAACAAGAAAATGAAAAGAACGAAAGCCACCGGCCGTTGGACGGAGTAATCGAAGCACCGTTTTCATTTCAACTCATCCAATTGGCTTCAATTCATCTCAACAATCTCTTCTTCTCTGCTTCCATTTATCCATCTTTCTCAATTCCCATTCCAAAATTCCATATCGATTTCTGTTTCCTGAATTTCACCTCAAAATGATTATTCATTCTTCGCTTTCAATTTCCAATCAGTCTTCTTCTTCTTCTTCTTCTTATTCGCCTCTCCCATTTGTTAAACTCCGCAACTTCTCCAATCATTCCCTCCGTTTTCGCTGGTCGATTTCAGTGATTCGATGTGAAGCTCTCGGTTCCTCTTCTTCAGAGGTGGCGGTGCAGTCCTCTTCTTCTTCTTCGGGGGGAAGTAGGGTTGTGGAATCCCAAGAGGGTTCTTCCAAGGCAGGTCCATATCCCGGAGGAATGGGGCCTTACACCGGCAGAGATCCGAGTGTGAAGAAGCCTGGTTGGTTGAGGCAACGAGCTCCCCAGGGAGAGAAATTTCAGGAGGTCAAAGACTCCTTGTCTCGTTTGAATCTCAATACTGTCTGTGAAGAGGCCCAATGCCCCAACATTGGAGAGTGTTGGAATGGGGGAGGGGATGGAATTGCAACTGCCACAATTATGCTTCTTGGGGATACATGCACACGGGGATGTAGATTTTGTGCTGTAAAGACTAGCAGAAACCCTGCACCTCCTGATCCAATGGAACCACTTAATACTGCTACAGCTATTGCTAGTTGGGGTGTGGATTACATCGTCTTAACAAGTGTAGACCGTGATGATATTCCTGATGGAGGAAGTGGGCATTTTGCTCAAACAGTTAAAGCAATGAAGGAACTTAAGCCCGAGATAATGGTTGAGTGCTTAACTTCTGATTTCCGAGGTGACTTGAAGGCTGTGGAGACTCTCGTTCACTCAGGGTTAGATGTATTTGCTCACAATGTTGAGACTGTGAAACGGCTTCAAAGAATTGTTAGAGATCCTCGAGCTGGTTATGACCAAAGCTTAGCTGTGCTAAAACATGCAAAGCACAGTAAGGAGGGAATGATAACCAAATCTTCAATCATGCTAGGGCTCGGAGAATCCGATGATGAATTGAAGGAAGCTCTTGCTGATTTAAGGGCCATAGATGTGGATATTCTTACACTTGGGCAGTATTTGCAGCCCACCCCATTACACCTGACTGTCAAAGAATATGTCACACCCGAAAAGTTTGCATTCTGGAAAGAATATGGGGAGTCGATTGGATTCCGATACGTGGCTAGTGGGCCCTTGGTTCGATCATCATATCGGGCAGGTGAGCTCTTCGTCCAAACCATGGTTAGAGAAAGGGTCAAAAGCTCAACTGCAAATTGAAGGATCAACACTCACAGCTCTGACGTTTTTCGAGTTGTTGGTCATGCTGTAACATAGAAAAAGTGGAGGGAGAGGAATGATTTTCAAAGGAGAAGCCATTGTGGACAACATTGAATACATGGCCAACTTAGCAATGATCCAATAGGGGATGGAAGATTCAAACAAAACAACAACAACAATAATACGTTTATTCACTTATCAAAAGCTAAGTTTAGTGTTAATAATAAAATAGTGCACGTTTCAAGTTTTGTTTTGTTGTAATCACGAGTGCGTCTATTTTTTATTCTATGTTCTACCAATGTATTAAAAAATCAAGCCAACATTTAAAAACTAAATAAAAAAA

Coding sequence (CDS)

ATGATTATTCATTCTTCGCTTTCAATTTCCAATCAGTCTTCTTCTTCTTCTTCTTCTTATTCGCCTCTCCCATTTGTTAAACTCCGCAACTTCTCCAATCATTCCCTCCGTTTTCGCTGGTCGATTTCAGTGATTCGATGTGAAGCTCTCGGTTCCTCTTCTTCAGAGGTGGCGGTGCAGTCCTCTTCTTCTTCTTCGGGGGGAAGTAGGGTTGTGGAATCCCAAGAGGGTTCTTCCAAGGCAGGTCCATATCCCGGAGGAATGGGGCCTTACACCGGCAGAGATCCGAGTGTGAAGAAGCCTGGTTGGTTGAGGCAACGAGCTCCCCAGGGAGAGAAATTTCAGGAGGTCAAAGACTCCTTGTCTCGTTTGAATCTCAATACTGTCTGTGAAGAGGCCCAATGCCCCAACATTGGAGAGTGTTGGAATGGGGGAGGGGATGGAATTGCAACTGCCACAATTATGCTTCTTGGGGATACATGCACACGGGGATGTAGATTTTGTGCTGTAAAGACTAGCAGAAACCCTGCACCTCCTGATCCAATGGAACCACTTAATACTGCTACAGCTATTGCTAGTTGGGGTGTGGATTACATCGTCTTAACAAGTGTAGACCGTGATGATATTCCTGATGGAGGAAGTGGGCATTTTGCTCAAACAGTTAAAGCAATGAAGGAACTTAAGCCCGAGATAATGGTTGAGTGCTTAACTTCTGATTTCCGAGGTGACTTGAAGGCTGTGGAGACTCTCGTTCACTCAGGGTTAGATGTATTTGCTCACAATGTTGAGACTGTGAAACGGCTTCAAAGAATTGTTAGAGATCCTCGAGCTGGTTATGACCAAAGCTTAGCTGTGCTAAAACATGCAAAGCACAGTAAGGAGGGAATGATAACCAAATCTTCAATCATGCTAGGGCTCGGAGAATCCGATGATGAATTGAAGGAAGCTCTTGCTGATTTAAGGGCCATAGATGTGGATATTCTTACACTTGGGCAGTATTTGCAGCCCACCCCATTACACCTGACTGTCAAAGAATATGTCACACCCGAAAAGTTTGCATTCTGGAAAGAATATGGGGAGTCGATTGGATTCCGATACGTGGCTAGTGGGCCCTTGGTTCGATCATCATATCGGGCAGGTGAGCTCTTCGTCCAAACCATGGTTAGAGAAAGGGTCAAAAGCTCAACTGCAAATTGA

Protein sequence

MIIHSSLSISNQSSSSSSSYSPLPFVKLRNFSNHSLRFRWSISVIRCEALGSSSSEVAVQSSSSSSGGSRVVESQEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQEVKDSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEPLNTATAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMITKSSIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTAN*

Homology

[Close]

BLAST of CsGy5G019920 vs. ExPASy Swiss-Prot
Match: B9RX57 (Lipoyl synthase, chloroplastic OS=Ricinus communis OX=3988 GN=LIP1P PE=3 SV=1)

HSP 1 Score: 582.8 bits (1501), Expect = 3.0e-165
Identity = 289/344 (84.01%), Postives = 313/344 (90.99%), Query Frame = 0


Query: 54  SSEVAVQSSSSSSGGSRVVESQEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEK 113
           SS +  Q S++S   +    +    SK       MGPYTGRDP+VKKP WLRQRAPQGE+
Sbjct: 24  SSRIQCQLSTNSPSSNTKTTTVTVPSKK-----TMGPYTGRDPNVKKPEWLRQRAPQGER 83

Query: 114 FQEVKDSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTS 173
           FQEVK SLS L LNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTS
Sbjct: 84  FQEVKHSLSSLKLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTS 143

Query: 174 RNPAPPDPMEPLNTATAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMV 233
           RNP+PPDP+EP NTA AIASWGVDYIVLTSVDRDD+PDGGSGHF++TV+AMK+LKPEIMV
Sbjct: 144 RNPSPPDPLEPQNTALAIASWGVDYIVLTSVDRDDLPDGGSGHFSETVQAMKKLKPEIMV 203

Query: 234 ECLTSDFRGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKHSK 293
           ECLTSDFRGDL+AVETLVHSGLDVFAHN+ETVKRLQRIVRDPRAGY+QSL+VLKHAKHSK
Sbjct: 204 ECLTSDFRGDLEAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLSVLKHAKHSK 263

Query: 294 EGMITKSSIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFA 353
           EGMITKSSIMLGLGE+DDELKEA+ADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFA
Sbjct: 264 EGMITKSSIMLGLGETDDELKEAMADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFA 323

Query: 354 FWKEYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTA 398
           FWKEYGESIGFRYVASGP+VRSSYRAGELFV+TMV+ER  +S A
Sbjct: 324 FWKEYGESIGFRYVASGPMVRSSYRAGELFVKTMVKERSSNSAA 362

[Close]

BLAST of CsGy5G019920 vs. ExPASy Swiss-Prot
Match: B9I666 (Lipoyl synthase 1, chloroplastic OS=Populus trichocarpa OX=3694 GN=LIP1P-1 PE=3 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 9.5e-164
Identity = 293/365 (80.27%), Postives = 321/365 (87.95%), Query Frame = 0


Query: 38  FRWSISVIRCEALG-SSSSEVAVQ----SSSSSSGGSRVVESQEGSSKAGPYPGGMGPYT 97
           F  S S IRCE++   SSS++  +    SS +S+GG                 G MG YT
Sbjct: 27  FLCSYSKIRCESVDYPSSSKIDAKHPQISSINSNGG-----------------GKMGSYT 86

Query: 98  GRDPSVKKPGWLRQRAPQGEKFQEVKDSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATA 157
           GRDP+VKKP WLRQ+APQGE++ EVK+SLSRL LNTVC+EAQCPNIGECWNGGGDGIATA
Sbjct: 87  GRDPNVKKPEWLRQKAPQGERYDEVKESLSRLKLNTVCQEAQCPNIGECWNGGGDGIATA 146

Query: 158 TIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEPLNTATAIASWGVDYIVLTSVDRDDIPDG 217
           TIM+LGDTCTRGCRFCAVKTSRNP PPDPMEPLNTA AIASWGVDYIV+TSVDRDD+PDG
Sbjct: 147 TIMVLGDTCTRGCRFCAVKTSRNPPPPDPMEPLNTALAIASWGVDYIVITSVDRDDLPDG 206

Query: 218 GSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNVETVKRLQRIV 277
           GSGHFAQTV+AMKELKPEIMVECLTSDFRGDLKAV+TLVHSGLDVFAHNVETVKRLQRIV
Sbjct: 207 GSGHFAQTVRAMKELKPEIMVECLTSDFRGDLKAVDTLVHSGLDVFAHNVETVKRLQRIV 266

Query: 278 RDPRAGYDQSLAVLKHAKHSKEGMITKSSIMLGLGESDDELKEALADLRAIDVDILTLGQ 337
           RDPRAGY+QSL+VLKHAK SK+GMITK+SIMLGLGESD+E+KEA+ADLRAI VDILT GQ
Sbjct: 267 RDPRAGYEQSLSVLKHAKISKKGMITKTSIMLGLGESDNEVKEAMADLRAIGVDILTFGQ 326

Query: 338 YLQPTPLHLTVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERV 397
           YLQPTPLHLTVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGELFV+TMV+E V
Sbjct: 327 YLQPTPLHLTVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGELFVKTMVKESV 374

[Close]

BLAST of CsGy5G019920 vs. ExPASy Swiss-Prot
Match: B9N2B0 (Lipoyl synthase 2, chloroplastic OS=Populus trichocarpa OX=3694 GN=LIP1P-2 PE=3 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 9.5e-164
Identity = 291/372 (78.23%), Postives = 323/372 (86.83%), Query Frame = 0


Query: 38  FRWSISVIRCEALGSSS----------SEVAVQSSSSSSGGSRVVESQEGSSKAGPYPGG 97
           F  S S IRCE++   S          +   + + SSSS    +  +++G     PYPGG
Sbjct: 27  FFCSYSKIRCESVDYPSLTKIDAKHPQNSTTINNGSSSSASVDLKNNEKGPY---PYPGG 86

Query: 98  --MGPYTGRDPSVKKPGWLRQRAPQGEKFQEVKDSLSRLNLNTVCEEAQCPNIGECWNGG 157
             MGPYTGRD + KKP WLRQRAPQGE+F+EVK+S+SRLNLNTVC+EAQCPNIGECWNGG
Sbjct: 87  GKMGPYTGRDLNEKKPEWLRQRAPQGERFEEVKESISRLNLNTVCQEAQCPNIGECWNGG 146

Query: 158 GDGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEPLNTATAIASWGVDYIVLTSVD 217
           GDGIATATIM+LGDTCTRGCRFCAVKTSR P PPDPMEPLNTA AIASWGVDYIV+TSVD
Sbjct: 147 GDGIATATIMVLGDTCTRGCRFCAVKTSRTPPPPDPMEPLNTALAIASWGVDYIVITSVD 206

Query: 218 RDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNVETV 277
           RDD+ DGGSGHFAQTV+AMKELKPEIMVECLTSDFRGDLKAV+TLVHSGLDVFAHNVETV
Sbjct: 207 RDDLSDGGSGHFAQTVRAMKELKPEIMVECLTSDFRGDLKAVDTLVHSGLDVFAHNVETV 266

Query: 278 KRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMITKSSIMLGLGESDDELKEALADLRAIDV 337
           KRLQRIVRDPRAGY+QSL+VLKHAK SK+GMITK+SIMLGLGE+DDE+KEA+ DLRAIDV
Sbjct: 267 KRLQRIVRDPRAGYEQSLSVLKHAKVSKKGMITKTSIMLGLGETDDEVKEAMTDLRAIDV 326

Query: 338 DILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGELFVQ 397
           DILT GQYLQPTPLHLTVKEYV+PEKFA+WKEYGESIGFRYVASGPLVRSSYRAGELFV+
Sbjct: 327 DILTFGQYLQPTPLHLTVKEYVSPEKFAYWKEYGESIGFRYVASGPLVRSSYRAGELFVK 386

[Close]

BLAST of CsGy5G019920 vs. ExPASy Swiss-Prot
Match: Q8LEE8 (Lipoyl synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIP1P PE=1 SV=2)

HSP 1 Score: 576.6 bits (1485), Expect = 2.1e-163
Identity = 294/378 (77.78%), Postives = 326/378 (86.24%), Query Frame = 0


Query: 26  VKLRNFSNHSLRFRWSISVIRCEALGSSSSEV---AVQSSSSSSGGSRVVES--QEGSSK 85
           +  +   +HS +F      IRCE+ G  SS +   AV  SS     S + +S  +    K
Sbjct: 16  ISTQKLHHHSSKFLNLGFRIRCES-GDVSSPLRTKAVSLSSEMEDSSSLKKSLMELEGKK 75

Query: 86  AGPYPGG---MGPYTGRDPSVKKPGWLRQRAPQGEKFQEVKDSLSRLNLNTVCEEAQCPN 145
           + PYPGG   MGP+TGRDP+VKKP WLRQ+APQGE+FQEVK+SLSRLNLNTVCEEAQCPN
Sbjct: 76  SEPYPGGMPKMGPFTGRDPNVKKPAWLRQKAPQGERFQEVKESLSRLNLNTVCEEAQCPN 135

Query: 146 IGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEPLNTATAIASWGVD 205
           IGECWNGGGDG+ATATIM+LGDTCTRGCRFCAVKTSRNP PPDPMEP NTA AIASWGVD
Sbjct: 136 IGECWNGGGDGVATATIMVLGDTCTRGCRFCAVKTSRNPPPPDPMEPENTAKAIASWGVD 195

Query: 206 YIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDV 265
           YIV+TSVDRDDIPDGGSGHFAQTVKAMK  KP+IM+ECLTSDFRGDL+AV+TLVHSGLDV
Sbjct: 196 YIVITSVDRDDIPDGGSGHFAQTVKAMKRHKPDIMIECLTSDFRGDLEAVDTLVHSGLDV 255

Query: 266 FAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMITKSSIMLGLGESDDELKEAL 325
           FAHNVETVKRLQR+VRDPRAGY+QS++VLKHAK SK GMITK+SIMLGLGE+D+ELKEA+
Sbjct: 256 FAHNVETVKRLQRLVRDPRAGYEQSMSVLKHAKISKPGMITKTSIMLGLGETDEELKEAM 315

Query: 326 ADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSY 385
           ADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKF FWK YGESIGFRYVASGPLVRSSY
Sbjct: 316 ADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFDFWKTYGESIGFRYVASGPLVRSSY 375

Query: 386 RAGELFVQTMVRERVKSS 396
           RAGELFV+TMV+E    S
Sbjct: 376 RAGELFVKTMVKESYSKS 392

[Close]

BLAST of CsGy5G019920 vs. ExPASy Swiss-Prot
Match: B6TN12 (Lipoyl synthase 1, chloroplastic OS=Zea mays OX=4577 GN=LIP1P-1 PE=2 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 1.4e-146
Identity = 247/316 (78.16%), Postives = 278/316 (87.97%), Query Frame = 0


Query: 89  GPYTGRDPSVKKPGWLRQRAPQGEKFQEVKDSLSRLNLNTVCEEAQCPNIGECWNGG--- 148
           GPYTGRDP VKKP WLRQRA QGEK+  +++S+  L LNTVC EAQCPNIGECWNGG   
Sbjct: 46  GPYTGRDPEVKKPAWLRQRAAQGEKYARLRESIGELKLNTVCVEAQCPNIGECWNGGGGA 105

Query: 149 ---GDGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEPLNTATAIASWGVDYIVLT 208
              GDGIATATIM+LGDTCTRGCRFCAVKTS  P PPDP+EPLNTA A+ASWGVDY+VLT
Sbjct: 106 GGEGDGIATATIMVLGDTCTRGCRFCAVKTSNKPPPPDPLEPLNTALAVASWGVDYVVLT 165

Query: 209 SVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNV 268
           SVDRDD+PDGGS HFAQTVKA+KELKP I+VECLTSDFRGDL+A+ +L  SGLDV+AHN+
Sbjct: 166 SVDRDDLPDGGSSHFAQTVKALKELKPGILVECLTSDFRGDLEAISSLASSGLDVYAHNI 225

Query: 269 ETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMITKSSIMLGLGESDDELKEALADLRA 328
           ETV+ LQRIVRDPRAGYDQSLAVLKHAK  +EGM+TKSSIMLGLGE+D+E+K+A+ DLRA
Sbjct: 226 ETVRSLQRIVRDPRAGYDQSLAVLKHAKACREGMVTKSSIMLGLGETDEEVKQAMMDLRA 285

Query: 329 IDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGEL 388
           I VDILTLGQYLQPT  HLTV+EYVTPEKF FWKEYGES+GFRYVASGPLVRSSYRAGEL
Sbjct: 286 IGVDILTLGQYLQPTERHLTVREYVTPEKFQFWKEYGESVGFRYVASGPLVRSSYRAGEL 345

Query: 389 FVQTMVRERVKSSTAN 399
           FVQ +VR     S+++
Sbjct: 346 FVQNLVRNNKTGSSSS 361

[Close]

BLAST of CsGy5G019920 vs. NCBI nr
Match: XP_004147097.1 (lipoyl synthase, chloroplastic [Cucumis sativus] >KGN51575.1 hypothetical protein Csa_009401 [Cucumis sativus])

HSP 1 Score: 785 bits (2027), Expect = 3.19e-286
Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 0


Query: 1   MIIHSSLSISNQSSSSSSSYSPLPFVKLRNFSNHSLRFRWSISVIRCEALGSSSSEVAVQ 60
           MIIHSSLSISNQSSSSSSSYSPLPFVKLRNFSNHSLRFRWSISVIRCEALGSSSSEVAVQ
Sbjct: 1   MIIHSSLSISNQSSSSSSSYSPLPFVKLRNFSNHSLRFRWSISVIRCEALGSSSSEVAVQ 60

Query: 61  SSSSSSGGSRVVESQEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQEVKDS 120
           SSSSSSGGSRVVESQEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQEVKDS
Sbjct: 61  SSSSSSGGSRVVESQEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQEVKDS 120

Query: 121 LSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPD 180
           LSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPD
Sbjct: 121 LSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPD 180

Query: 181 PMEPLNTATAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDF 240
           PMEPLNTATAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDF
Sbjct: 181 PMEPLNTATAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDF 240

Query: 241 RGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMITKS 300
           RGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMITKS
Sbjct: 241 RGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMITKS 300

Query: 301 SIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGE 360
           SIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGE
Sbjct: 301 SIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGE 360

Query: 361 SIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTAN 398
           SIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTAN
Sbjct: 361 SIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTAN 398

[Close]

BLAST of CsGy5G019920 vs. NCBI nr
Match: XP_008445908.1 (PREDICTED: lipoyl synthase, chloroplastic [Cucumis melo] >KAA0034092.1 lipoyl synthase [Cucumis melo var. makuwa] >TYK15826.1 lipoyl synthase [Cucumis melo var. makuwa])

HSP 1 Score: 748 bits (1931), Expect = 1.36e-271
Identity = 385/400 (96.25%), Postives = 389/400 (97.25%), Query Frame = 0


Query: 1   MIIHSSLSISNQSSSSSSSYSPLPFVKLRNFSNHSLRFRWSISVIRCEALGSSSSEVAVQ 60
           MIIHSSLSISNQS SSS  +SPLPFVKLRNFSNHSLRFR SISVIRCEAL SSSSEVAVQ
Sbjct: 1   MIIHSSLSISNQSPSSS--HSPLPFVKLRNFSNHSLRFRRSISVIRCEALDSSSSEVAVQ 60

Query: 61  SS--SSSSGGSRVVESQEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQEVK 120
           SS  SSSS G RV+E QEGSSKAGPYPGGMGP+TGRDPSVKKPGWLRQRAPQGEKFQEVK
Sbjct: 61  SSYSSSSSVGGRVMEPQEGSSKAGPYPGGMGPHTGRDPSVKKPGWLRQRAPQGEKFQEVK 120

Query: 121 DSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAP 180
           DSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAP
Sbjct: 121 DSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAP 180

Query: 181 PDPMEPLNTATAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTS 240
           PDPMEPLNTA AIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTS
Sbjct: 181 PDPMEPLNTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTS 240

Query: 241 DFRGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMIT 300
           DFRGDLKAVETLVHSGLDVFAHN+ETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMIT
Sbjct: 241 DFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMIT 300

Query: 301 KSSIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEY 360
           KSSIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEY
Sbjct: 301 KSSIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEY 360

Query: 361 GESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTAN 398
           GESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTAN
Sbjct: 361 GESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTAN 398

[Close]

BLAST of CsGy5G019920 vs. NCBI nr
Match: XP_038893417.1 (lipoyl synthase, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 725 bits (1872), Expect = 1.80e-262
Identity = 377/406 (92.86%), Postives = 384/406 (94.58%), Query Frame = 0


Query: 2   IIHSSLSISNQSSSSSSS---YSPLPFVKLRNFSNHSLRFRWSISVIRCEALGSSSSEVA 61
           +IH SLSIS+ SSSSSSS   +SPLPFVK RNFSN S RFR SISVIRCEAL SSSSEVA
Sbjct: 1   MIHPSLSISSPSSSSSSSPSPHSPLPFVKPRNFSNSSPRFRRSISVIRCEALYSSSSEVA 60

Query: 62  VQSSSSSSG------GSRVVESQEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGE 121
           VQSSSSSS       GSRV+ESQE SSKAGPYPGGMGP+TGRDPSVKKP WLRQRAPQGE
Sbjct: 61  VQSSSSSSSLPLSEVGSRVMESQESSSKAGPYPGGMGPHTGRDPSVKKPTWLRQRAPQGE 120

Query: 122 KFQEVKDSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKT 181
           KFQEVK+SLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKT
Sbjct: 121 KFQEVKNSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKT 180

Query: 182 SRNPAPPDPMEPLNTATAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIM 241
           SRNPAPPDPMEP NTA AIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIM
Sbjct: 181 SRNPAPPDPMEPFNTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIM 240

Query: 242 VECLTSDFRGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKHS 301
           VECLTSDFRGDLKAVETLVHSGLDVFAHN+ETVKRLQRIVRDPRAGYDQSLAVL HAKHS
Sbjct: 241 VECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYDQSLAVLNHAKHS 300

Query: 302 KEGMITKSSIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKF 361
           KEGMITKSSIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKF
Sbjct: 301 KEGMITKSSIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKF 360

Query: 362 AFWKEYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTAN 398
           AFWKEYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTAN
Sbjct: 361 AFWKEYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTAN 406

[Close]

BLAST of CsGy5G019920 vs. NCBI nr
Match: XP_023541459.1 (lipoyl synthase, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 693 bits (1789), Expect = 6.35e-250
Identity = 360/401 (89.78%), Postives = 374/401 (93.27%), Query Frame = 0


Query: 2   IIHSSLSISNQSSSSSSSYSPLPFVKLRNFSNHSLRFRWSISVIRCEAL--GSSSSEVAV 61
           +IH S SISN SSSS+SS+SP  FVK R FSN+   F  S  VIRC+A+   SSSS+VAV
Sbjct: 1   MIHYSFSISNPSSSSTSSHSPFQFVKPRRFSNY---FGRSCPVIRCDAVDSSSSSSKVAV 60

Query: 62  QSSSSSSGG----SRVVESQEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQ 121
           +SSSSSS      S+V+ESQE SSKAGPYPGGMGPYTGRDP+VKKPGWLRQRAPQGEKFQ
Sbjct: 61  ESSSSSSFPVSKVSKVMESQEISSKAGPYPGGMGPYTGRDPTVKKPGWLRQRAPQGEKFQ 120

Query: 122 EVKDSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRN 181
           EVKDSLSRL LNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRN
Sbjct: 121 EVKDSLSRLKLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRN 180

Query: 182 PAPPDPMEPLNTATAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVEC 241
           PAPPDPMEP+NTA AIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVEC
Sbjct: 181 PAPPDPMEPVNTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVEC 240

Query: 242 LTSDFRGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEG 301
           LTSDFRGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEG
Sbjct: 241 LTSDFRGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEG 300

Query: 302 MITKSSIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFW 361
           MITKSSIMLGLGE+DDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFW
Sbjct: 301 MITKSSIMLGLGETDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFW 360

Query: 362 KEYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSST 396
           KEYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVK +T
Sbjct: 361 KEYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKDTT 398

[Close]

BLAST of CsGy5G019920 vs. NCBI nr
Match: XP_022945153.1 (lipoyl synthase, chloroplastic [Cucurbita moschata])

HSP 1 Score: 688 bits (1776), Expect = 6.79e-248
Identity = 359/405 (88.64%), Postives = 373/405 (92.10%), Query Frame = 0


Query: 2   IIHSSLSISNQSSSSSSSYSPLPFVKLRNFSNHSLRFRWSISVIRCEAL--GSSSSEVAV 61
           +IH S SISN SSS+SS +SP  FVK   FSN+   F  S  VIRC+A+   SSSS+VAV
Sbjct: 1   MIHYSFSISNPSSSTSS-HSPFQFVKPHRFSNY---FGRSCPVIRCDAVDSSSSSSKVAV 60

Query: 62  QSSSSSSGGS--------RVVESQEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQG 121
           +SSSSSS  S        +V+ESQE SSKAGPYPGGMGPYTGRDP+VKKPGWLRQRAPQG
Sbjct: 61  ESSSSSSSSSSFPVSKVSKVMESQEISSKAGPYPGGMGPYTGRDPTVKKPGWLRQRAPQG 120

Query: 122 EKFQEVKDSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVK 181
           EKFQEVKDSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVK
Sbjct: 121 EKFQEVKDSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVK 180

Query: 182 TSRNPAPPDPMEPLNTATAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEI 241
           TSRNPAPPDPMEP+NTA AIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEI
Sbjct: 181 TSRNPAPPDPMEPVNTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEI 240

Query: 242 MVECLTSDFRGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKH 301
           MVECLTSDFRGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKH
Sbjct: 241 MVECLTSDFRGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKH 300

Query: 302 SKEGMITKSSIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEK 361
           SKEGMITKSSIMLGLGE+DDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEK
Sbjct: 301 SKEGMITKSSIMLGLGETDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEK 360

Query: 362 FAFWKEYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSST 396
           FAFWKEYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVK +T
Sbjct: 361 FAFWKEYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKDTT 401

[Close]

BLAST of CsGy5G019920 vs. ExPASy TrEMBL
Match: A0A0A0KPN0 (Lipoyl synthase, chloroplastic OS=Cucumis sativus OX=3659 GN=LIP1P PE=3 SV=1)

HSP 1 Score: 785 bits (2027), Expect = 1.54e-286
Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 0


Query: 1   MIIHSSLSISNQSSSSSSSYSPLPFVKLRNFSNHSLRFRWSISVIRCEALGSSSSEVAVQ 60
           MIIHSSLSISNQSSSSSSSYSPLPFVKLRNFSNHSLRFRWSISVIRCEALGSSSSEVAVQ
Sbjct: 1   MIIHSSLSISNQSSSSSSSYSPLPFVKLRNFSNHSLRFRWSISVIRCEALGSSSSEVAVQ 60

Query: 61  SSSSSSGGSRVVESQEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQEVKDS 120
           SSSSSSGGSRVVESQEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQEVKDS
Sbjct: 61  SSSSSSGGSRVVESQEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQEVKDS 120

Query: 121 LSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPD 180
           LSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPD
Sbjct: 121 LSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPD 180

Query: 181 PMEPLNTATAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDF 240
           PMEPLNTATAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDF
Sbjct: 181 PMEPLNTATAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDF 240

Query: 241 RGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMITKS 300
           RGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMITKS
Sbjct: 241 RGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMITKS 300

Query: 301 SIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGE 360
           SIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGE
Sbjct: 301 SIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGE 360

Query: 361 SIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTAN 398
           SIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTAN
Sbjct: 361 SIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTAN 398

[Close]

BLAST of CsGy5G019920 vs. ExPASy TrEMBL
Match: A0A5D3CZE8 (Lipoyl synthase, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=LIP1P PE=3 SV=1)

HSP 1 Score: 748 bits (1931), Expect = 6.60e-272
Identity = 385/400 (96.25%), Postives = 389/400 (97.25%), Query Frame = 0


Query: 1   MIIHSSLSISNQSSSSSSSYSPLPFVKLRNFSNHSLRFRWSISVIRCEALGSSSSEVAVQ 60
           MIIHSSLSISNQS SSS  +SPLPFVKLRNFSNHSLRFR SISVIRCEAL SSSSEVAVQ
Sbjct: 1   MIIHSSLSISNQSPSSS--HSPLPFVKLRNFSNHSLRFRRSISVIRCEALDSSSSEVAVQ 60

Query: 61  SS--SSSSGGSRVVESQEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQEVK 120
           SS  SSSS G RV+E QEGSSKAGPYPGGMGP+TGRDPSVKKPGWLRQRAPQGEKFQEVK
Sbjct: 61  SSYSSSSSVGGRVMEPQEGSSKAGPYPGGMGPHTGRDPSVKKPGWLRQRAPQGEKFQEVK 120

Query: 121 DSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAP 180
           DSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAP
Sbjct: 121 DSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAP 180

Query: 181 PDPMEPLNTATAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTS 240
           PDPMEPLNTA AIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTS
Sbjct: 181 PDPMEPLNTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTS 240

Query: 241 DFRGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMIT 300
           DFRGDLKAVETLVHSGLDVFAHN+ETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMIT
Sbjct: 241 DFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMIT 300

Query: 301 KSSIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEY 360
           KSSIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEY
Sbjct: 301 KSSIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEY 360

Query: 361 GESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTAN 398
           GESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTAN
Sbjct: 361 GESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTAN 398

[Close]

BLAST of CsGy5G019920 vs. ExPASy TrEMBL
Match: A0A1S3BDA7 (Lipoyl synthase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488790 PE=3 SV=1)

HSP 1 Score: 748 bits (1931), Expect = 6.60e-272
Identity = 385/400 (96.25%), Postives = 389/400 (97.25%), Query Frame = 0


Query: 1   MIIHSSLSISNQSSSSSSSYSPLPFVKLRNFSNHSLRFRWSISVIRCEALGSSSSEVAVQ 60
           MIIHSSLSISNQS SSS  +SPLPFVKLRNFSNHSLRFR SISVIRCEAL SSSSEVAVQ
Sbjct: 1   MIIHSSLSISNQSPSSS--HSPLPFVKLRNFSNHSLRFRRSISVIRCEALDSSSSEVAVQ 60

Query: 61  SS--SSSSGGSRVVESQEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQEVK 120
           SS  SSSS G RV+E QEGSSKAGPYPGGMGP+TGRDPSVKKPGWLRQRAPQGEKFQEVK
Sbjct: 61  SSYSSSSSVGGRVMEPQEGSSKAGPYPGGMGPHTGRDPSVKKPGWLRQRAPQGEKFQEVK 120

Query: 121 DSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAP 180
           DSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAP
Sbjct: 121 DSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAP 180

Query: 181 PDPMEPLNTATAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTS 240
           PDPMEPLNTA AIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTS
Sbjct: 181 PDPMEPLNTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTS 240

Query: 241 DFRGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMIT 300
           DFRGDLKAVETLVHSGLDVFAHN+ETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMIT
Sbjct: 241 DFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMIT 300

Query: 301 KSSIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEY 360
           KSSIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEY
Sbjct: 301 KSSIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEY 360

Query: 361 GESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTAN 398
           GESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTAN
Sbjct: 361 GESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTAN 398

[Close]

BLAST of CsGy5G019920 vs. ExPASy TrEMBL
Match: A0A6J1G009 (Lipoyl synthase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449476 PE=3 SV=1)

HSP 1 Score: 688 bits (1776), Expect = 3.29e-248
Identity = 359/405 (88.64%), Postives = 373/405 (92.10%), Query Frame = 0


Query: 2   IIHSSLSISNQSSSSSSSYSPLPFVKLRNFSNHSLRFRWSISVIRCEAL--GSSSSEVAV 61
           +IH S SISN SSS+SS +SP  FVK   FSN+   F  S  VIRC+A+   SSSS+VAV
Sbjct: 1   MIHYSFSISNPSSSTSS-HSPFQFVKPHRFSNY---FGRSCPVIRCDAVDSSSSSSKVAV 60

Query: 62  QSSSSSSGGS--------RVVESQEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQG 121
           +SSSSSS  S        +V+ESQE SSKAGPYPGGMGPYTGRDP+VKKPGWLRQRAPQG
Sbjct: 61  ESSSSSSSSSSFPVSKVSKVMESQEISSKAGPYPGGMGPYTGRDPTVKKPGWLRQRAPQG 120

Query: 122 EKFQEVKDSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVK 181
           EKFQEVKDSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVK
Sbjct: 121 EKFQEVKDSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVK 180

Query: 182 TSRNPAPPDPMEPLNTATAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEI 241
           TSRNPAPPDPMEP+NTA AIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEI
Sbjct: 181 TSRNPAPPDPMEPVNTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEI 240

Query: 242 MVECLTSDFRGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKH 301
           MVECLTSDFRGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKH
Sbjct: 241 MVECLTSDFRGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKH 300

Query: 302 SKEGMITKSSIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEK 361
           SKEGMITKSSIMLGLGE+DDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEK
Sbjct: 301 SKEGMITKSSIMLGLGETDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEK 360

Query: 362 FAFWKEYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSST 396
           FAFWKEYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVK +T
Sbjct: 361 FAFWKEYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKDTT 401

[Close]

BLAST of CsGy5G019920 vs. ExPASy TrEMBL
Match: A0A6J1HVC4 (Lipoyl synthase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466525 PE=3 SV=1)

HSP 1 Score: 682 bits (1761), Expect = 5.67e-246
Identity = 356/402 (88.56%), Postives = 372/402 (92.54%), Query Frame = 0


Query: 2   IIHSSLSISNQSSSSSSSYSPLPFVKLRNFSNHSLRFRWSISVIRCEAL--GSSSSEVAV 61
           +IH S SISN SSS+SS +SP  FVK   FSN+  RF     +IRC+A+   SSSS+VAV
Sbjct: 1   MIHYSFSISNPSSSTSS-HSPFQFVKPHRFSNYFGRF---CPLIRCDAVDSSSSSSKVAV 60

Query: 62  QSSSSSSGG-----SRVVESQEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKF 121
           +SSSSSS       S+V+ES E SSKAGPYPGGMGPYTGRDP+VKKPGWLRQRAPQGEKF
Sbjct: 61  ESSSSSSSFPVSKVSKVMESPEISSKAGPYPGGMGPYTGRDPTVKKPGWLRQRAPQGEKF 120

Query: 122 QEVKDSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSR 181
           QEVK+SLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSR
Sbjct: 121 QEVKNSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSR 180

Query: 182 NPAPPDPMEPLNTATAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVE 241
           NPAPPDPMEP+NTA AIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVE
Sbjct: 181 NPAPPDPMEPVNTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVE 240

Query: 242 CLTSDFRGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKE 301
           CLTSDFRGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKE
Sbjct: 241 CLTSDFRGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKE 300

Query: 302 GMITKSSIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAF 361
           GMITKSSIMLGLGE+DDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAF
Sbjct: 301 GMITKSSIMLGLGETDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAF 360

Query: 362 WKEYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSST 396
           WKEYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVK +T
Sbjct: 361 WKEYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKDTT 398

[Close]

BLAST of CsGy5G019920 vs. TAIR 10
Match: AT5G08415.1 (Radical SAM superfamily protein )

HSP 1 Score: 576.6 bits (1485), Expect = 1.5e-164
Identity = 294/378 (77.78%), Postives = 326/378 (86.24%), Query Frame = 0


Query: 26  VKLRNFSNHSLRFRWSISVIRCEALGSSSSEV---AVQSSSSSSGGSRVVES--QEGSSK 85
           +  +   +HS +F      IRCE+ G  SS +   AV  SS     S + +S  +    K
Sbjct: 16  ISTQKLHHHSSKFLNLGFRIRCES-GDVSSPLRTKAVSLSSEMEDSSSLKKSLMELEGKK 75

Query: 86  AGPYPGG---MGPYTGRDPSVKKPGWLRQRAPQGEKFQEVKDSLSRLNLNTVCEEAQCPN 145
           + PYPGG   MGP+TGRDP+VKKP WLRQ+APQGE+FQEVK+SLSRLNLNTVCEEAQCPN
Sbjct: 76  SEPYPGGMPKMGPFTGRDPNVKKPAWLRQKAPQGERFQEVKESLSRLNLNTVCEEAQCPN 135

Query: 146 IGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEPLNTATAIASWGVD 205
           IGECWNGGGDG+ATATIM+LGDTCTRGCRFCAVKTSRNP PPDPMEP NTA AIASWGVD
Sbjct: 136 IGECWNGGGDGVATATIMVLGDTCTRGCRFCAVKTSRNPPPPDPMEPENTAKAIASWGVD 195

Query: 206 YIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDV 265
           YIV+TSVDRDDIPDGGSGHFAQTVKAMK  KP+IM+ECLTSDFRGDL+AV+TLVHSGLDV
Sbjct: 196 YIVITSVDRDDIPDGGSGHFAQTVKAMKRHKPDIMIECLTSDFRGDLEAVDTLVHSGLDV 255

Query: 266 FAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMITKSSIMLGLGESDDELKEAL 325
           FAHNVETVKRLQR+VRDPRAGY+QS++VLKHAK SK GMITK+SIMLGLGE+D+ELKEA+
Sbjct: 256 FAHNVETVKRLQRLVRDPRAGYEQSMSVLKHAKISKPGMITKTSIMLGLGETDEELKEAM 315

Query: 326 ADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSY 385
           ADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKF FWK YGESIGFRYVASGPLVRSSY
Sbjct: 316 ADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFDFWKTYGESIGFRYVASGPLVRSSY 375

Query: 386 RAGELFVQTMVRERVKSS 396
           RAGELFV+TMV+E    S
Sbjct: 376 RAGELFVKTMVKESYSKS 392

[Close]

BLAST of CsGy5G019920 vs. TAIR 10
Match: AT2G20860.1 (lipoic acid synthase 1 )

HSP 1 Score: 362.8 bits (930), Expect = 3.4e-100
Identity = 189/372 (50.81%), Postives = 256/372 (68.82%), Query Frame = 0


Query: 32  SNHSLRFRWSISVIRCEALGSSSSEVAVQSSSSSSGGSRVVESQEGSSKAGPYPG---GM 91
           S  +L +R+     RC +  S+ + V V  S  S    R   + E  S      G    +
Sbjct: 3   SRSALLYRFLRPASRCFSSSSAVTPVTVTQSPKSLEALRARLANESPSLTDFIHGDTYSV 62

Query: 92  GPYTGRDPSVKKPGWLRQRAPQGEKFQEVKDSLSRLNLNTVCEEAQCPNIGECWNGGGDG 151
              T + P + KP W+++  P GE++ ++K  L  L L+TVCEEA+CPN+GECW+GG  G
Sbjct: 63  EVGTKKKP-LPKPKWMKESIPGGERYVQIKKKLRDLKLHTVCEEAKCPNLGECWSGGETG 122

Query: 152 IATATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEPLNTATAIASWGVDYIVLTSVDRDD 211
            ATATIM+LGDTCTRGCRFC VKTSR P PPDP EP N A AIASWGVDY+V+TSVDRDD
Sbjct: 123 TATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPNNVAEAIASWGVDYVVITSVDRDD 182

Query: 212 IPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNVETVKRL 271
           +PD GSGHFA+TV+ +K LKPE+++E L  DFRGD   VE +  SGLDV AHN+ETV+ L
Sbjct: 183 LPDQGSGHFAETVQRLKFLKPEMLIEALVPDFRGDGGCVEKVSKSGLDVLAHNIETVEEL 242

Query: 272 QRIVRDPRAGYDQSLAVLKHAK-HSKEGMITKSSIMLGLGESDDELKEALADLRAIDVDI 331
           Q  VRD RA + QSL VL+ AK ++  G +TK+S+MLG GE+ D++ + +  +RA  VD+
Sbjct: 243 QSFVRDHRANFKQSLDVLRMAKEYAPAGTLTKTSVMLGCGETPDQVVKTMEKVRAAGVDV 302

Query: 332 LTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGELFVQTM 391
           +T GQY++P+  H+ V EYVTP+ F  ++  G  +GFRYVASGP+VRSSY+AGE ++++M
Sbjct: 303 MTFGQYMRPSKRHMPVAEYVTPDAFERYRLLGMEMGFRYVASGPMVRSSYKAGEYYIKSM 362

Query: 392 VR-ERVKSSTAN 399
           +  +RV S + +
Sbjct: 363 IEADRVASPSTS 373

The following BLAST results are available for this feature:

BLAST of CsGy5G019920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9RX57	3.0e-165	84.01	Lipoyl synthase, chloroplastic OS=Ricinus communis OX=3988 GN=LIP1P PE=3 SV=1	[more]
B9I666	9.5e-164	80.27	Lipoyl synthase 1, chloroplastic OS=Populus trichocarpa OX=3694 GN=LIP1P-1 PE=3 ...	[more]
B9N2B0	9.5e-164	78.23	Lipoyl synthase 2, chloroplastic OS=Populus trichocarpa OX=3694 GN=LIP1P-2 PE=3 ...	[more]
Q8LEE8	2.1e-163	77.78	Lipoyl synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIP1P PE=1 SV=...	[more]
B6TN12	1.4e-146	78.16	Lipoyl synthase 1, chloroplastic OS=Zea mays OX=4577 GN=LIP1P-1 PE=2 SV=1	[more]

BLAST of CsGy5G019920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147097.1	3.19e-286	100.00	lipoyl synthase, chloroplastic [Cucumis sativus] >KGN51575.1 hypothetical protei...	[more]
XP_008445908.1	1.36e-271	96.25	PREDICTED: lipoyl synthase, chloroplastic [Cucumis melo] >KAA0034092.1 lipoyl sy...	[more]
XP_038893417.1	1.80e-262	92.86	lipoyl synthase, chloroplastic-like [Benincasa hispida]	[more]
XP_023541459.1	6.35e-250	89.78	lipoyl synthase, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022945153.1	6.79e-248	88.64	lipoyl synthase, chloroplastic [Cucurbita moschata]	[more]

BLAST of CsGy5G019920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPN0	1.54e-286	100.00	Lipoyl synthase, chloroplastic OS=Cucumis sativus OX=3659 GN=LIP1P PE=3 SV=1	[more]
A0A5D3CZE8	6.60e-272	96.25	Lipoyl synthase, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=LIP1P P...	[more]
A0A1S3BDA7	6.60e-272	96.25	Lipoyl synthase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488790 PE=3 SV=1	[more]
A0A6J1G009	3.29e-248	88.64	Lipoyl synthase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449476 PE=...	[more]
A0A6J1HVC4	5.67e-246	88.56	Lipoyl synthase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466525 PE=3 ...	[more]

BLAST of CsGy5G019920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08415.1	1.5e-164	77.78	Radical SAM superfamily protein	[more]
AT2G20860.1	3.4e-100	50.81	lipoic acid synthase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006638	Elp3/MiaB/NifB	SMART	SM00729	MiaB	coord: 151..360 e-value: 1.9E-15 score: 67.3
IPR031691	Lipoyl synthase, N-terminal	PFAM	PF16881	LIAS_N	coord: 98..135 e-value: 5.3E-9 score: 36.5
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70	Aldolase class I	coord: 145..352 e-value: 6.1E-19 score: 70.2
IPR003698	Lipoyl synthase	TIGRFAM	TIGR00510	TIGR00510	coord: 94..390 e-value: 2.7E-122 score: 405.7
IPR003698	Lipoyl synthase	SFLD	SFLDF00271	lipoyl_synthase	coord: 95..387 e-value: 0.0 score: 438.3
IPR003698	Lipoyl synthase	PANTHER	PTHR10949	LIPOYL SYNTHASE	coord: 45..391
IPR003698	Lipoyl synthase	HAMAP	MF_00206	Lipoyl_synth	coord: 99..391 score: 134.779068
IPR007197	Radical SAM	PFAM	PF04055	Radical_SAM	coord: 159..319 e-value: 1.3E-15 score: 58.2
IPR007197	Radical SAM	PROSITE	PS51918	RADICAL_SAM	coord: 144..365 score: 27.931782
None	No IPR available	SFLD	SFLDG01058	lipoyl_synthase_like	coord: 95..387 e-value: 0.0 score: 438.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..112
None	No IPR available	PANTHER	PTHR10949:SF32	LIPOYL SYNTHASE, CHLOROPLASTIC	coord: 45..391
None	No IPR available	CDD	cd01335	Radical_SAM	coord: 155..334 e-value: 1.64452E-8 score: 52.3357
None	No IPR available	SUPERFAMILY	102114	Radical SAM enzymes	coord: 111..389
IPR027526	Lipoyl synthase, chloroplastic	HAMAP	MF_03129	Lipoyl_synth_plantC	coord: 40..397 score: 60.353806

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G019920.1	CsGy5G019920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009107	lipoate biosynthetic process
biological_process	GO:0009249	protein lipoylation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0016992	lipoate synthase activity
molecular_function	GO:0102552	lipoyl synthase activity (acting on glycine-cleavage complex H protein
molecular_function	GO:0102553	lipoyl synthase activity (acting on pyruvate dehydrogenase E2 protein)
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0051536	iron-sulfur cluster binding