CsGy5G017270 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G017270
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	CASP-like protein
Location	Gy14Chr5: 23614249 .. 23615947 (+)
RNA-Seq Expression	CsGy5G017270
Synteny	CsGy5G017270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGGAAAAGATCAATGGCTTCAAAGGGTTTAAGAATTGCTTCTCTTATTTTGAGAAATTTAACCTTTATTTTGACATTTATTTCTCTCTTAATTGTTGCTACCAACTCTAAAACTGTTTTGATCGACGGGACTGTTGGTGAAGTTAAAGTTAAGTTCAATAATGTTGCTTCCTATCGGTAAGTCTTACTATTTTTTATTTTTTTTTTTGGTTATTGTTGTTGTTGTTATTGTGTAGTAATTAATTAGTGTGTTTTGAATTTAAATATGTCACAGTTATTTGGTAGCAACTGCTGTTATAGGAGGTGCTTTAAGTCTCCTTCAAATTGTTTTCAACATTTACCATCTTATTACTAATGGCGAGGGAACTCCACTTTTCTATATGTTCAGCGATCAGGTGATCATCATACTTTTTTCATCCTATTTTCTCTCTTTTTCGTCATGTTTCAACTTAAATCGTTCAGGTTAGGTGCGATTTATTTTCCATCAACCCAAATCGAGAAATCTACCAGTGTACATGGACCAAGTAATTGAGTTGTGTTGGGTTGATGGTTTTCTTTTTTTACTATCTTTGGTTGCAACTCAACAAAGTCTTTATAACCCAAGTCAGTTTGGTTATAGGAATTTTTTTTAAAATACTTAAATTCATATATGTATGTGTTTAATGCCTAAAATTTCATAAAACTCAAATTCTAAATACTAATTATACATCATAACTATTACAAGTTTTAAACAAACACATATTTTTTAAAGAAAATAATTAAAAATTCACAAATTTATCCCTCTTAAAGTAAATAACATAGTTTTTAGATAAAATTTTAAAAATAGAAAAATTAACAAAATATTTATCTTGCATGAAAAAGTTAAAAGTAATGAACGTTGCATTCTGGAGAATTTTTTCTATGGAGTGTACAAGCAAATTTTCTATTTTTGAATTTTTTTCTAATATTTAATATATAAATAATTTAGATTGAGTTGGTTCAACGACCTAATCCAATTTCAAAAGAGAAAAAAAAAGTTAACCCAACCCGAACAAATAACAAAACATAAACTCAATAACGACCTAACCTTCGTGAGTTCTGAGTTATCCCTGTCATTTTCCTTTTGTTAACTAATCTTTCGAATTAAGTTAATTAAAACATGGTTTAGTTAGATGGATTTTAACGTTTGATATAGGGAGGAAAAAGAAAAAGAAAAAGAAAAGAACAATGTATCATAGAAGATAACGAAAAGGAGAACAAGAAATGCTGGAGCTGGGTTGGTTGGTAGTGACCTTTTTGTTTAGTTTGAAATATTATATTTCATATTTCATATTAATTAGATTTAGGGATACAACATACAGCTAGGTTTCAAGAAAAGTATAGAGAAACCTCACAAATTTCAACTAGTGGTTCCTATTGAGGATGGATCCATAATATATAGACAATGTTATTTTTCTTAATTATTATGGATAACTGGTTTTGATGTTTTAGAATGATATTTTTGTACGTGTGCAGTTGTTAACGTACCTTCTATTATCGGGGGCGTCAGCGGGTTTAGGGGCGGGGATCGACTTGAGAGTGAATATTAAAGAGCTGCTTGAGGGCACTTATTTCAACTCATTTTTTGACAAAGCCAATGCTGGATCTGCTATTCTTCTCCTTGCGTTTGTTTGTGCTGCCATTGTTTCAGTTCTCTCTTCCTTGGCTCTCATTAGATAG

mRNA sequence

GAAGGAAAAGATCAATGGCTTCAAAGGGTTTAAGAATTGCTTCTCTTATTTTGAGAAATTTAACCTTTATTTTGACATTTATTTCTCTCTTAATTGTTGCTACCAACTCTAAAACTGTTTTGATCGACGGGACTGTTGGTGAAGTTAAAGTTAAGTTCAATAATGTTGCTTCCTATCGTTATTTGGTAGCAACTGCTGTTATAGGAGGTGCTTTAAGTCTCCTTCAAATTGTTTTCAACATTTACCATCTTATTACTAATGGCGAGGGAACTCCACTTTTCTATATGTTCAGCGATCAGTTGTTAACGTACCTTCTATTATCGGGGGCGTCAGCGGGTTTAGGGGCGGGGATCGACTTGAGAGTGAATATTAAAGAGCTGCTTGAGGGCACTTATTTCAACTCATTTTTTGACAAAGCCAATGCTGGATCTGCTATTCTTCTCCTTGCGTTTGTTTGTGCTGCCATTGTTTCAGTTCTCTCTTCCTTGGCTCTCATTAGATAG

Coding sequence (CDS)

ATGGCTTCAAAGGGTTTAAGAATTGCTTCTCTTATTTTGAGAAATTTAACCTTTATTTTGACATTTATTTCTCTCTTAATTGTTGCTACCAACTCTAAAACTGTTTTGATCGACGGGACTGTTGGTGAAGTTAAAGTTAAGTTCAATAATGTTGCTTCCTATCGTTATTTGGTAGCAACTGCTGTTATAGGAGGTGCTTTAAGTCTCCTTCAAATTGTTTTCAACATTTACCATCTTATTACTAATGGCGAGGGAACTCCACTTTTCTATATGTTCAGCGATCAGTTGTTAACGTACCTTCTATTATCGGGGGCGTCAGCGGGTTTAGGGGCGGGGATCGACTTGAGAGTGAATATTAAAGAGCTGCTTGAGGGCACTTATTTCAACTCATTTTTTGACAAAGCCAATGCTGGATCTGCTATTCTTCTCCTTGCGTTTGTTTGTGCTGCCATTGTTTCAGTTCTCTCTTCCTTGGCTCTCATTAGATAG

Protein sequence

MASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVATAVIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIKELLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR*

Homology

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BLAST of CsGy5G017270 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.9e-22
Identity = 69/160 (43.12%), Postives = 108/160 (67.50%), Query Frame = 0


Query: 7   RIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVATAVIGGA 66
           R+A+LILR LTFI    SL+I+ TN+ T+ +D  + EVKV F +V +YRY++AT VIG A
Sbjct: 11  RMAALILRILTFIFLIASLVILTTNTATLELD--LVEVKVHFKDVYAYRYMLATIVIGLA 70

Query: 67  LSLLQIVFNIYHLIT-----NGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIKE 126
            ++LQI F +Y++ T     +G+G   F  F D++++Y+L++GA+AG  +  D    IK 
Sbjct: 71  YTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKD----IKP 130

Query: 127 LLEGT-YFNSFFDKANAGSAILLLAFVCAAIVSVLSSLAL 161
           +  G+  F++F +K  A +++LL+ FVC A++SV SS AL
Sbjct: 131 VFSGSGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYAL 164

[Close]

BLAST of CsGy5G017270 vs. ExPASy Swiss-Prot
Match: C6T1Z6 (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.7e-21
Identity = 64/164 (39.02%), Postives = 105/164 (64.02%), Query Frame = 0


Query: 2   ASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVATA 61
           +S G R   L+LR LTF+   I+L+++A   +T   D   G V++KFN++ +YRY+++T 
Sbjct: 13  SSTGSRTVLLLLRVLTFVFLLIALILIAIVKQT---DDETG-VEIKFNDIYAYRYMISTI 72

Query: 62  VIGGALSLLQIVFNIYHLIT-----NGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLR 121
           +IG A +LLQ+  +I+ +++     +G+G  LF  F D++++YLL+SG++AG G  +   
Sbjct: 73  IIGFAYNLLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTV--- 132

Query: 122 VNIKELLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLAL 161
               EL  G   NSF DKANA +++LL+AF+  A+ S  +S AL
Sbjct: 133 ----ELGRGVPSNSFMDKANASASLLLIAFLFTAVASTFTSFAL 165

[Close]

BLAST of CsGy5G017270 vs. ExPASy Swiss-Prot
Match: A1XGB4 (CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.8e-18
Identity = 62/155 (40.00%), Postives = 93/155 (60.00%), Query Frame = 0


Query: 10  SLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVATAVIGGALSL 69
           SLI+R LT I   IS +++ATN++TV      G+VK+KF +  +YRYL+AT +IG A +L
Sbjct: 14  SLIVRILTLICLLISFIVIATNNQTV--STVAGDVKIKFKDFYAYRYLIATVIIGMAYTL 73

Query: 70  LQIVFNIYHLIT----NGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIKELLEG 129
           LQI F+I  L T     GEG  LF  + D+ ++Y L++GA+A  G   DL    K+L   
Sbjct: 74  LQIAFSISLLTTGNRIGGEGFLLFDFYGDKFISYFLVTGAAASFGMTQDL----KQLEGS 133

Query: 130 TYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLAL 161
             ++ F + +NA +++ L+ F  A   S+ SS  L
Sbjct: 134 DNYSKFLNTSNAAASLCLIGFFFAVASSIFSSYNL 162

[Close]

BLAST of CsGy5G017270 vs. ExPASy Swiss-Prot
Match: B9NBE5 (CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 1.9e-17
Identity = 61/160 (38.12%), Postives = 95/160 (59.38%), Query Frame = 0


Query: 7   RIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVATAVIGGA 66
           R+ +L LR LTF    +SL+I+ TN+ T+ I   + E KV+  +  SYRY++A    G  
Sbjct: 20  RMTALFLRVLTFAFLMVSLVIMTTNTGTIEIG--IDEFKVRSKDFYSYRYMLAAIAFGLT 79

Query: 67  LSLLQIVFNIYHLI------TNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIK 126
            ++LQI   + H+       T+G+G  +F  + D++++Y+L +GA+A  GA  +L    K
Sbjct: 80  YTILQIALTLNHISKRNGAQTSGDGNLVFDFYGDKVVSYILATGAAAAFGATKEL----K 139

Query: 127 ELLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLAL 161
             L G   + FF+K  A +++LLL FVC AI+SV SS AL
Sbjct: 140 TQLAGLGGDKFFNKGYASASLLLLGFVCTAILSVFSSYAL 173

[Close]

BLAST of CsGy5G017270 vs. ExPASy Swiss-Prot
Match: D7LD60 (CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903205 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.6e-16
Identity = 60/161 (37.27%), Postives = 98/161 (60.87%), Query Frame = 0


Query: 6   LRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVATAVIGG 65
           LR   L+LR LT     I++++++TN+ T+ +  T   +K++FN+V +YRY+++ AVIG 
Sbjct: 13  LRTVLLLLRVLTAAFLVITVVLISTNTVTLEVSST--SIKMRFNDVYAYRYMLSAAVIGL 72

Query: 66  ALSLLQIVFNIYHLITNGEGTPLFYMFS---DQLLTYLLLSGASAGLGAGIDLRVNIKEL 125
             +++Q+   I    T G   PL Y F+   D++++YLL +G++AG G   DL+     L
Sbjct: 73  LYAVVQLFLTISQFAT-GTTHPLNYQFNFYGDKIISYLLATGSAAGFGVSKDLKETFLAL 132

Query: 126 LE---GTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLAL 161
           +E       + FF K  A +++LL AFV  A++SV SSLAL
Sbjct: 133 IEFDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLAL 170

[Close]

BLAST of CsGy5G017270 vs. NCBI nr
Match: KGN51298.1 (hypothetical protein Csa_008715 [Cucumis sativus])

HSP 1 Score: 292 bits (747), Expect = 5.29e-99
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVAT 60
           MASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVAT
Sbjct: 1   MASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVAT 60

Query: 61  AVIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIK 120
           AVIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIK
Sbjct: 61  AVIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIK 120

Query: 121 ELLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162
           ELLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR
Sbjct: 121 ELLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162

[Close]

BLAST of CsGy5G017270 vs. NCBI nr
Match: XP_031741190.1 (CASP-like protein 4D1 [Cucumis sativus])

HSP 1 Score: 292 bits (747), Expect = 1.59e-98
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVAT 60
           MASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVAT
Sbjct: 33  MASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVAT 92

Query: 61  AVIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIK 120
           AVIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIK
Sbjct: 93  AVIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIK 152

Query: 121 ELLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162
           ELLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR
Sbjct: 153 ELLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 194

[Close]

BLAST of CsGy5G017270 vs. NCBI nr
Match: XP_038877614.1 (CASP-like protein 4D1 [Benincasa hispida])

HSP 1 Score: 223 bits (568), Expect = 9.91e-72
Identity = 125/162 (77.16%), Postives = 144/162 (88.89%), Query Frame = 0


Query: 1   MASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVAT 60
           MASKG RIASLILR LTFIL F++LLI+ATNSKTVL +GTV E K++F +V SYRYLVA 
Sbjct: 1   MASKGSRIASLILRILTFILIFVALLIIATNSKTVL-EGTVNETKIEFKDVNSYRYLVAV 60

Query: 61  AVIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIK 120
           AVIGGALSLLQI F IYHL+T G+GTPLF +FSD+LL+YLLLSGASAGLGAGID+RVN K
Sbjct: 61  AVIGGALSLLQIAFTIYHLVTKGDGTPLFDLFSDKLLSYLLLSGASAGLGAGIDMRVNFK 120

Query: 121 ELLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162
           EL+ G +FNSFFDK +A +AILLLAF+CAAIVS+LSSLALIR
Sbjct: 121 ELV-GNFFNSFFDKGSAAAAILLLAFICAAIVSILSSLALIR 160

[Close]

BLAST of CsGy5G017270 vs. NCBI nr
Match: XP_004142753.1 (CASP-like protein 4D1 [Cucumis sativus] >KGN51297.1 hypothetical protein Csa_009093 [Cucumis sativus])

HSP 1 Score: 219 bits (558), Expect = 3.52e-70
Identity = 125/162 (77.16%), Postives = 139/162 (85.80%), Query Frame = 0


Query: 1   MASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVAT 60
           MASKGLRIAS+ILR LTFI  FISLLIVATN+KTV    TV E KVKF++V SYRY+VA 
Sbjct: 1   MASKGLRIASVILRILTFIFIFISLLIVATNTKTVY-KYTVNEHKVKFSDVNSYRYVVAA 60

Query: 61  AVIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIK 120
            VIGGAL LLQI FNIYHL+T  EGTPLFYMFSDQLLTYLLLS ASAGLG+GIDLR NIK
Sbjct: 61  TVIGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIK 120

Query: 121 ELLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162
            L++G  ++SFFDK NAGSAIL LAF+C+AIVSVLSSLALI+
Sbjct: 121 VLVDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIK 161

[Close]

BLAST of CsGy5G017270 vs. NCBI nr
Match: XP_022134193.1 (CASP-like protein 4D1 [Momordica charantia])

HSP 1 Score: 204 bits (518), Expect = 4.16e-64
Identity = 116/161 (72.05%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 2   ASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVATA 61
           ASKG RIASLILR LTF+L FISLLI+ATNSKTVL  GT  E KV+F +V SYRYL A A
Sbjct: 3   ASKGSRIASLILRILTFVLIFISLLIIATNSKTVL-KGTEAEAKVEFKDVYSYRYLTAAA 62

Query: 62  VIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIKE 121
           VIG ALSLLQI   +YH++T  +GTP F MFSD+LLTYLLLSGASAGLGAGIDLR N K+
Sbjct: 63  VIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYKD 122

Query: 122 LLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162
           L+ G  FNSFFDK +A +AILLLAF+C+A+VS+LSSLAL+R
Sbjct: 123 LV-GNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVR 161

[Close]

BLAST of CsGy5G017270 vs. ExPASy TrEMBL
Match: A0A0A0KNU7 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515030 PE=3 SV=1)

HSP 1 Score: 292 bits (747), Expect = 2.56e-99
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVAT 60
           MASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVAT
Sbjct: 1   MASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVAT 60

Query: 61  AVIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIK 120
           AVIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIK
Sbjct: 61  AVIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIK 120

Query: 121 ELLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162
           ELLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR
Sbjct: 121 ELLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162

[Close]

BLAST of CsGy5G017270 vs. ExPASy TrEMBL
Match: A0A0A0KS88 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515020 PE=3 SV=1)

HSP 1 Score: 219 bits (558), Expect = 1.71e-70
Identity = 125/162 (77.16%), Postives = 139/162 (85.80%), Query Frame = 0


Query: 1   MASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVAT 60
           MASKGLRIAS+ILR LTFI  FISLLIVATN+KTV    TV E KVKF++V SYRY+VA 
Sbjct: 1   MASKGLRIASVILRILTFIFIFISLLIVATNTKTVY-KYTVNEHKVKFSDVNSYRYVVAA 60

Query: 61  AVIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIK 120
            VIGGAL LLQI FNIYHL+T  EGTPLFYMFSDQLLTYLLLS ASAGLG+GIDLR NIK
Sbjct: 61  TVIGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIK 120

Query: 121 ELLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162
            L++G  ++SFFDK NAGSAIL LAF+C+AIVSVLSSLALI+
Sbjct: 121 VLVDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIK 161

[Close]

BLAST of CsGy5G017270 vs. ExPASy TrEMBL
Match: A0A6J1C1A4 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1)

HSP 1 Score: 204 bits (518), Expect = 2.02e-64
Identity = 116/161 (72.05%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 2   ASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVATA 61
           ASKG RIASLILR LTF+L FISLLI+ATNSKTVL  GT  E KV+F +V SYRYL A A
Sbjct: 3   ASKGSRIASLILRILTFVLIFISLLIIATNSKTVL-KGTEAEAKVEFKDVYSYRYLTAAA 62

Query: 62  VIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIKE 121
           VIG ALSLLQI   +YH++T  +GTP F MFSD+LLTYLLLSGASAGLGAGIDLR N K+
Sbjct: 63  VIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYKD 122

Query: 122 LLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162
           L+ G  FNSFFDK +A +AILLLAF+C+A+VS+LSSLAL+R
Sbjct: 123 LV-GNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVR 161

[Close]

BLAST of CsGy5G017270 vs. ExPASy TrEMBL
Match: A0A6J1HET3 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463525 PE=3 SV=1)

HSP 1 Score: 197 bits (501), Expect = 7.77e-62
Identity = 110/161 (68.32%), Postives = 133/161 (82.61%), Query Frame = 0


Query: 2   ASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVATA 61
           ASKG RIASLILR LTFIL FISL+I ATNSKT L  GT  E K++F NV SYRYL+A A
Sbjct: 3   ASKGSRIASLILRILTFILIFISLIINATNSKT-LNKGTENEAKLEFKNVYSYRYLIAAA 62

Query: 62  VIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIKE 121
           VIGG LSL+QI+ +IYH++T  EGTPLFY+FSD LL+YLLLS +SA LGAGID+R N+KE
Sbjct: 63  VIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLKE 122

Query: 122 LLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162
           L  GT F+SFFD+ +  +A+L +AFVCAA+VS+LS+LALIR
Sbjct: 123 LF-GTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIR 161

[Close]

BLAST of CsGy5G017270 vs. ExPASy TrEMBL
Match: A0A6J1JSF8 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487423 PE=3 SV=1)

HSP 1 Score: 192 bits (488), Expect = 7.36e-60
Identity = 107/161 (66.46%), Postives = 132/161 (81.99%), Query Frame = 0


Query: 2   ASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVATA 61
           ASKG RIA+LILR LT IL FISL+I A+NSKT L  GT  E K++F NV SYRYL+A A
Sbjct: 3   ASKGSRIATLILRILTLILIFISLIINASNSKT-LNKGTENEAKLEFKNVYSYRYLIAAA 62

Query: 62  VIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIKE 121
           VIGG LSL+QI+ +IYH++T  EGTPLFY+FSD LL+YLLLS +SA LGAGID R N+KE
Sbjct: 63  VIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDTRANLKE 122

Query: 122 LLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162
           L  GT F+SFFD+ +  +A+LL+AF+CAA+VS+LS+LALIR
Sbjct: 123 LF-GTLFDSFFDQGSGAAAVLLIAFICAAVVSILSALALIR 161

[Close]

BLAST of CsGy5G017270 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 85.5 bits (210), Expect = 4.3e-17
Identity = 61/161 (37.89%), Postives = 97/161 (60.25%), Query Frame = 0


Query: 6   LRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVATAVIGG 65
           LR   L+LR LT     I++++++TN+ T+ I  T   +K+ FN+V +YRY+++ AVIG 
Sbjct: 13  LRTVLLLLRVLTAAFLLITVVLISTNTVTLEISST--SIKLPFNDVYAYRYMLSAAVIGL 72

Query: 66  ALSLLQIVFNIYHLITNGEGTPLFYMF---SDQLLTYLLLSGASAGLGAGIDLRVNIKEL 125
             +++Q+   I    T G+  PL Y F    D++++YLL +G++AG G   DL+     L
Sbjct: 73  VYAVVQLFLTISQFAT-GKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIAL 132

Query: 126 LE---GTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLAL 161
           +E       + FF K  A +++LL AFV  A++SV SSLAL
Sbjct: 133 IEFDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLAL 170

[Close]

BLAST of CsGy5G017270 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 84.3 bits (207), Expect = 9.6e-17
Identity = 59/163 (36.20%), Postives = 99/163 (60.74%), Query Frame = 0


Query: 6   LRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVATAVIGG 65
           L++  L+LR LT +   I+L+I++TNS T++  G+   +K  F +V +YRY+++ AVIG 
Sbjct: 13  LKVLLLLLRVLTGVFLVIALIILSTNSVTIVSQGSA--LKFHFKDVYAYRYMLSAAVIGL 72

Query: 66  ALSLLQIVFNIYHLITNGEGTPLFY---MFSDQLLTYLLLSGASAGLGAGIDLRVNIKEL 125
             +++Q+ F I    T G   P  Y    + D+L++YL+ +G++AG G   DL+     L
Sbjct: 73  VYAVIQLFFTISEFAT-GVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLAL 132

Query: 126 --LEGT-YFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 163
             L+ T   + FF K  A +++LL AF+C A++SV SS A+ +
Sbjct: 133 VALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAK 172

The following BLAST results are available for this feature:

BLAST of CsGy5G017270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9SXY8	1.9e-22	43.13	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
C6T1Z6	3.7e-21	39.02	CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
A1XGB4	3.8e-18	40.00	CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1	[more]
B9NBE5	1.9e-17	38.13	CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 S...	[more]
D7LD60	3.6e-16	37.27	CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]

BLAST of CsGy5G017270 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN51298.1	5.29e-99	100.00	hypothetical protein Csa_008715 [Cucumis sativus]	[more]
XP_031741190.1	1.59e-98	100.00	CASP-like protein 4D1 [Cucumis sativus]	[more]
XP_038877614.1	9.91e-72	77.16	CASP-like protein 4D1 [Benincasa hispida]	[more]
XP_004142753.1	3.52e-70	77.16	CASP-like protein 4D1 [Cucumis sativus] >KGN51297.1 hypothetical protein Csa_009...	[more]
XP_022134193.1	4.16e-64	72.05	CASP-like protein 4D1 [Momordica charantia]	[more]

BLAST of CsGy5G017270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNU7	2.56e-99	100.00	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515030 PE=3 SV=1	[more]
A0A0A0KS88	1.71e-70	77.16	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515020 PE=3 SV=1	[more]
A0A6J1C1A4	2.02e-64	72.05	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1	[more]
A0A6J1HET3	7.77e-62	68.32	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463525 PE=3 SV=1	[more]
A0A6J1JSF8	7.36e-60	66.46	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487423 PE=3 SV=1	[more]

BLAST of CsGy5G017270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39530.1	4.3e-17	37.89	Uncharacterised protein family (UPF0497)	[more]
AT2G39518.1	9.6e-17	36.20	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 4..148 e-value: 4.9E-24 score: 84.8
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 11..156 e-value: 7.0E-12 score: 43.4
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 5..161
None	No IPR available	PANTHER	PTHR11615:SF148	CASP-LIKE PROTEIN 4D2	coord: 5..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G017270.2	CsGy5G017270.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding