CsGy5G016370 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G016370
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionReticulon domain-containing protein
LocationGy14Chr5: 22611008 .. 22614427 (+)
RNA-Seq ExpressionCsGy5G016370
SyntenyCsGy5G016370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAAACTTAAAAATGGCTTACTGTTTTTGAAGGCAACCAAATAAAATAAAAAAATGTATACAGGCGCTACTAAAAAATTAAAGCAAAAAAAAGGAGATGAAATTTAGGTGAGGAAAAGATATAGAAAATTAAAGAAAAGAAAAGGTGGAAGGAAAGACTGGGCGTTATGGGTTTGACGAATCATAGAGTTTGATATTTGGCGAAGCGTAGAGGGAGCGGAGAATGATGAGTCAAATTGGGGGAAGGATCGAGGGTTTGAGAGACACGCAAATGGCGAGTCGATCAATCAACTGCAAGACAGAAGTTGGCAAACCCTTTGTTGCGCTCATTTGCGGTTCTTTGGTTTATTATCATTGCGCCTTTCGAAATTCCAGTCTTCTCTCCCTTGTCGCTGATGTTTTCATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCTTCCGCCATATGAATGTCTCGTAAGCATTCCCTTCTTTCCGCCATTTTTTATTTCTACTTTCTTTTTTTTTTTTTTACTAGATTGGAGAACTTCTTCCAGATTGTTTTAAATGCTTCGGAGTTTATGTCAACGATCGTATAGCTCCAATTTTGTTGAAATTAGATACTCAATCTCTATGCATATCCTTATTCTCGTAATTATCTTTAATTAACATTATCTGTAATCTATAATAATCTAAAATTTAAATGATCTGTAGGGTTCCAGTAGACCCTCTTGAGTGGCAAGTATCGCAGGATACTGCTAATAGTATGATCGCTTGGTTAGCCAATACCATTGGTGCGGCTGAGTCTGTTCTGAGGGTGGCAGCTACAGGGCATGACAAGAGGCTTTTTGTTAAGGTATTGTTCTTTGATTATCACATTTTTGGGTAGTCTTAACTTGGCTTCTTTCAGTGAGTTTTGGGTTATTATTTGTACTCGAATATGTCCTTTTTTCTTTTCTTTTTTTTAAAACTTTTATTGTCTCTGTGAAACATAAATTCCTTCGTTTCAAATAATATATGAAATTACAAAAAGAGAGGTACCCTTTGTATAAAAGGAAATTAAGCTCTTACGTTGGATATAGGAGCAGTAAGACACAATAGGTATCCAACAAGTTATGTGAGAATACACACCAAATAACGGCAATACTAGAAAGATGTTAAAAAAACATCATTTTCTCCTTCAGCCAAATGGACCATAGAAAGGACTTAATGGAATCGAGCCAAATAGCTTCCCTTTCTTTCTTGAATTGCGCAAATTCCAGTAATGATAAAGAGTATTTGAAGTTTTCTATCTATGTTAACTCTTCTTGAAATTGAAAGATTATTGTATGTATGGAAAGTTTAAAGGTAAAATTTAATCCGCATGGAGTCGAAAATGCAATATTGTAAAAATAAATAAATTATATATCTAACAGACATACATTGAGATCAAATATCAAACATCGTGTAGGCATCAGCTTACATTGATACACGGTGAGGTTTCAGCAGCACATATAGGTTAAATGGTACAAAATACTCATAAACATTAGTGTATTTAATCATGTCCTTGACAATGATAAATTTTCATTTTGACCTTTACACTTCGGAATTGTTTCAACAAATTCATTTGGAAATCCTCTCCGGGCGTATGTGATGAGTTCTTTTTGCTATTATTTATTAGGCCATATTTTGTTAGATTGGAGACCTTTATTATAGAGTTCTCCCTTCCCTTTTGAGCTTGGTTTTTTTGTATGTAGGGTTTATGGTTTGGTATTCTTTCTTTTTTTTTCTTTTCTTCAATGAAGGATGATCCTTTATCAAAAAATAATAATAATTAATAATGTACAAAACAGCTATGGTGTAAATTTAGAATGCAAACATGATTTCATTTACAACATTTTTAATGTAAATTGATGTGACATCTGCTATGTAGAATTTGATTTTGGAAATGATGTTTAAATGATGTCGACGATATCTTGCTATATTGAAATGAATAGTAACAATGATCGTATTAGTTTATATGGTTGAAATTGAGTTGTAACCAATTCTATATGTGCTTTTCAATGTATAGAATTCATTATTTCATTTTTACAAGAAGGGAGAAACGCTAAAATGAATATGTGGGAGGATCAAATGAATTCTACTTTCATTTCTCCCTATAGAGCACAAAAGGTTGAGGTTTAAAATGAAAGTTTTCAAATTAAAAGGACATAAATAAAGGTTAGGTCAAATATCAGGAGTACACATGGTATATGTGACACCATTTGCGAGATCTAAATTGCTCTATCTGATAAGGCCTTTCAAAGAACCAACTCGTAAAACAAATAGCTGTATTGATCTTTCATCTTTTGCTTGTAAATTAAAGTCATGCAAATCTTTTCTGTAGGTCGTTGTTTGCCTTTACGCTCTCTCGGTGCTTGGAAGATTGGTCTCGGGTGTTACAGTTGCCTATACTGGTATGTCTGGCCTTCCTAATTGTCTCTACTTTTTTCTATCTTACAAGGTAATAAATATGCATGATGTTTTGGTAGGACCTTTTTCTCGTCATGTGGTGAAGCATTGCAGTTTAATTTGTTTTACCAATCTGATTTGTAGCGCTTAGCAGTTACAGATACCCTATTTGCAATTTTGCTACACTTATTCTTATAATTTTAAAAGATTATGCTGAGTCTCATTTCTGTTTATATTAGGGATAGTTAAATTCTTTTTGCATATCTATGGAAAAGCCTATCTGCAATTGATTCTAGTAGCTCTGGATGAACAGGTTTATGTATGTTGTGTATATACATGGTGTTGGAGAATTCTGAGTCAATAAGTGCTGCTATTTCTCCTATTCTTAGGAGAGGAAATGAACGTACTTCACATCAAGATGATATCTAATCTTCACTGGCTGTTACCCTGTTTTTCTTTTCTCTTTTTTACTGTAGATGAATTCATCTGTGTGAATATTATGGTTAACAGAATCTGTTTAGGCGGAATGGAGTAATAAATTTATTTGATGGAAATAGAATTTTAGGAGCCATTGTTGATTACTGATTGACCATTGTGGGTATCTTTTTTTCTTTTTTTGTGAAGTTGAAGTGAGTTGTTGTATGGTAAAGAAAATATTTGCCAGAACAGTCACTTGGGTTAATGCAATATTTGTACCAAGAAGGGATGATTAGAAGCAAGTTTGGTTTGATTCTACAATCTCACCTGAATAGGATTTGTTAGGTTATACTTCTACGTCCTTCAATTCTAAAGTTTGGTTTGGTTTGGTTGTTTGGTCCTTTCTTAAGAATCATACCAATCTTTTATTTTTATGTTTATTTGTATTTATTACTTTTTTTTTTTTTTTTACTATAATTGAGTACAATATAGGGATTTTAACCTTGTTTGTAATTCTCACCATTCTGAATCTCACAAGCTCTATGATTTTAATTAATTATATGTCAGGGAAATCTTTTTAATATGGAC

mRNA sequence

GAAAAACTTAAAAATGGCTTACTGTTTTTGAAGGCAACCAAATAAAATAAAAAAATGTATACAGGCGCTACTAAAAAATTAAAGCAAAAAAAAGGAGATGAAATTTAGGTGAGGAAAAGATATAGAAAATTAAAGAAAAGAAAAGGTGGAAGGAAAGACTGGGCGTTATGGGTTTGACGAATCATAGAGTTTGATATTTGGCGAAGCGTAGAGGGAGCGGAGAATGATGAGTCAAATTGGGGGAAGGATCGAGGGTTTGAGAGACACGCAAATGGCGAGTCGATCAATCAACTGCAAGACAGAAGTTGGCAAACCCTTTGTTGCGCTCATTTGCGGTTCTTTGGTTTATTATCATTGCGCCTTTCGAAATTCCAGTCTTCTCTCCCTTGTCGCTGATGTTTTCATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCTTCCGCCATATGAATGTCTCGGTTCCAGTAGACCCTCTTGAGTGGCAAGTATCGCAGGATACTGCTAATAGTATGATCGCTTGGTTAGCCAATACCATTGGTGCGGCTGAGTCTGTTCTGAGGGTGGCAGCTACAGGGCATGACAAGAGGCTTTTTGTTAAGGTCGTTGTTTGCCTTTACGCTCTCTCGGTGCTTGGAAGATTGGTCTCGGGTGTTACAGTTGCCTATACTGGTATGTCTGGCCTTCCTAATTGTCTCTACTTTTTTCTATCTTACAAGGTAATAAATATGCATGATGTTTTGGTAGGACCTTTTTCTCGTCATGTGGTGAAGCATTGCAGTTTAATTTGTTTTACCAATCTGATTTGTAGCGCTTAGCAGTTACAGATACCCTATTTGCAATTTTGCTACACTTATTCTTATAATTTTAAAAGATTATGCTGAGTCTCATTTCTGTTTATATTAGGGATAGTTAAATTCTTTTTGCATATCTATGGAAAAGCCTATCTGCAATTGATTCTAGTAGCTCTGGATGAACAGGTTTATGTATGTTGTGTATATACATGGTGTTGGAGAATTCTGAGTCAATAAGTGCTGCTATTTCTCCTATTCTTAGGAGAGGAAATGAACGTACTTCACATCAAGATGATATCTAATCTTCACTGGCTGTTACCCTGTTTTTCTTTTCTCTTTTTTACTGTAGATGAATTCATCTGTGTGAATATTATGGTTAACAGAATCTGTTTAGGCGGAATGGAGTAATAAATTTATTTGATGGAAATAGAATTTTAGGAGCCATTGTTGATTACTGATTGACCATTGTGGGTATCTTTTTTTCTTTTTTTGTGAAGTTGAAGTGAGTTGTTGTATGGTAAAGAAAATATTTGCCAGAACAGTCACTTGGGTTAATGCAATATTTGTACCAAGAAGGGATGATTAGAAGCAAGTTTGGTTTGATTCTACAATCTCACCTGAATAGGATTTGTTAGGTTATACTTCTACGTCCTTCAATTCTAAAGTTTGGTTTGGTTTGGTTGTTTGGTCCTTTCTTAAGAATCATACCAATCTTTTATTTTTATGTTTATTTGTATTTATTACTTTTTTTTTTTTTTTTACTATAATTGAGTACAATATAGGGATTTTAACCTTGTTTGTAATTCTCACCATTCTGAATCTCACAAGCTCTATGATTTTAATTAATTATATGTCAGGGAAATCTTTTTAATATGGAC

Coding sequence (CDS)

ATGATGAGTCAAATTGGGGGAAGGATCGAGGGTTTGAGAGACACGCAAATGGCGAGTCGATCAATCAACTGCAAGACAGAAGTTGGCAAACCCTTTGTTGCGCTCATTTGCGGTTCTTTGGTTTATTATCATTGCGCCTTTCGAAATTCCAGTCTTCTCTCCCTTGTCGCTGATGTTTTCATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCTTCCGCCATATGAATGTCTCGGTTCCAGTAGACCCTCTTGAGTGGCAAGTATCGCAGGATACTGCTAATAGTATGATCGCTTGGTTAGCCAATACCATTGGTGCGGCTGAGTCTGTTCTGAGGGTGGCAGCTACAGGGCATGACAAGAGGCTTTTTGTTAAGGTCGTTGTTTGCCTTTACGCTCTCTCGGTGCTTGGAAGATTGGTCTCGGGTGTTACAGTTGCCTATACTGGTATGTCTGGCCTTCCTAATTGTCTCTACTTTTTTCTATCTTACAAGGTAATAAATATGCATGATGTTTTGGTAGGACCTTTTTCTCGTCATGTGGTGAAGCATTGCAGTTTAATTTGTTTTACCAATCTGATTTGTAGCGCTTAG

Protein sequence

MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKVINMHDVLVGPFSRHVVKHCSLICFTNLICSA*
Homology
[Close]
BLAST of CsGy5G016370 vs. ExPASy Swiss-Prot
Match: Q8GWH5 (Reticulon-like protein B22 OS=Arabidopsis thaliana OX=3702 GN=RTNLB22 PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 6.6e-49
Identity = 98/126 (77.78%), Postives = 114/126 (90.48%), Query Frame = 0 

Query: 27  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPL 86
           E+GK    LI G+LVYYHCA+RN++LLSL +DVFIVLLCSLAILGLLFR +NVSVPVDPL
Sbjct: 3   EMGKAMGLLISGTLVYYHCAYRNATLLSLFSDVFIVLLCSLAILGLLFRQLNVSVPVDPL 62

Query: 87  EWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVT 146
           EWQ+SQDTA++++A LANT+GAAE VLRVAATGHDKRLFVKVV+CLY LS LGRL+SGVT
Sbjct: 63  EWQISQDTASNIVARLANTVGAAEGVLRVAATGHDKRLFVKVVICLYFLSALGRLISGVT 122

Query: 147 VAYTGM 153
           VAY G+
Sbjct: 123 VAYAGL 128

[Close]
BLAST of CsGy5G016370 vs. ExPASy Swiss-Prot
Match: P0C941 (Reticulon-like protein B23 OS=Arabidopsis thaliana OX=3702 GN=RTNLB23 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.8e-46
Identity = 94/126 (74.60%), Postives = 113/126 (89.68%), Query Frame = 0 

Query: 27  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPL 86
           E+GK    LI G+LVY+HCA RN++LLSL++DV IVLL SLAILGLLFRH+NVSVPVDPL
Sbjct: 3   EMGKAIGLLISGTLVYHHCANRNATLLSLISDVLIVLLSSLAILGLLFRHLNVSVPVDPL 62

Query: 87  EWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVT 146
           EWQ+SQDTA +++A LANT+GAAESVLRVAATGHDKRLFVKVV+CLY L+ LGR++SGVT
Sbjct: 63  EWQISQDTACNIVARLANTVGAAESVLRVAATGHDKRLFVKVVICLYFLAALGRIISGVT 122

Query: 147 VAYTGM 153
           +AY G+
Sbjct: 123 IAYAGL 128

[Close]
BLAST of CsGy5G016370 vs. NCBI nr
Match: XP_011655303.1 (reticulon-like protein B22 [Cucumis sativus] >KGN51194.1 hypothetical protein Csa_009004 [Cucumis sativus])

HSP 1 Score: 292 bits (748), Expect = 3.85e-98
Identity = 155/163 (95.09%), Postives = 157/163 (96.32%), Query Frame = 0 

Query: 1   MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVF 60
           MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVF
Sbjct: 1   MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVF 60

Query: 61  IVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGH 120
           IVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGH
Sbjct: 61  IVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGH 120

Query: 121 DKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFL 163
           DKRLFVKVVVCLYALSVLGRLVSGVTVAYTG+  L  C+Y  L
Sbjct: 121 DKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCML--CIYMVL 161

[Close]
BLAST of CsGy5G016370 vs. NCBI nr
Match: KAA0040534.1 (reticulon-like protein B23 isoform X1 [Cucumis melo var. makuwa] >TYK05576.1 reticulon-like protein B23 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 290 bits (743), Expect = 1.01e-97
Identity = 157/186 (84.41%), Postives = 161/186 (86.56%), Query Frame = 0 

Query: 2   MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFI 61
           MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFI
Sbjct: 1   MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFI 60

Query: 62  VLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHD 121
           VLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAWLANTIGAAESVLRVAATGHD
Sbjct: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120

Query: 122 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKVINMHDVLVGPFSRH 181
           KRLFVKVVVCLYALSVLGRLVSGVTVAYTG                   H  ++  F+RH
Sbjct: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTG-------------------HFSML--FTRH 165

Query: 182 VVKHCS 187
           VVKHCS
Sbjct: 181 VVKHCS 165

[Close]
BLAST of CsGy5G016370 vs. NCBI nr
Match: XP_008465703.1 (PREDICTED: reticulon-like protein B22 isoform X2 [Cucumis melo])

HSP 1 Score: 286 bits (733), Expect = 7.15e-96
Identity = 154/179 (86.03%), Postives = 158/179 (88.27%), Query Frame = 0 

Query: 2   MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFI 61
           MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFI
Sbjct: 1   MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFI 60

Query: 62  VLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHD 121
           VLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAWLANTIGAAESVLRVAATGHD
Sbjct: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120

Query: 122 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKVINMHDVLVGPFSR 180
           KRLFVKVVVCLYALSVLGRLVSGVTVAYTG+  L  C+Y  L           + PF R
Sbjct: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCML--CIYMVLENS--ESISAAISPFLR 175

[Close]
BLAST of CsGy5G016370 vs. NCBI nr
Match: XP_008465702.1 (PREDICTED: reticulon-like protein B23 isoform X1 [Cucumis melo])

HSP 1 Score: 283 bits (724), Expect = 2.21e-94
Identity = 147/150 (98.00%), Postives = 148/150 (98.67%), Query Frame = 0 

Query: 2   MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFI 61
           MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFI
Sbjct: 1   MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFI 60

Query: 62  VLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHD 121
           VLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAWLANTIGAAESVLRVAATGHD
Sbjct: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120

Query: 122 KRLFVKVVVCLYALSVLGRLVSGVTVAYTG 151
           KRLFVKVVVCLYALSVLGRLVSGVTVAYTG
Sbjct: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTG 150

[Close]
BLAST of CsGy5G016370 vs. NCBI nr
Match: XP_038889154.1 (reticulon-like protein B22 [Benincasa hispida])

HSP 1 Score: 278 bits (710), Expect = 2.27e-92
Identity = 147/179 (82.12%), Postives = 158/179 (88.27%), Query Frame = 0 

Query: 2   MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFI 61
           MSQIG R EGLR+T+MA+R+INCKTEVGKPFVALICGSL+YYHCA+RNSSLLSLVADVFI
Sbjct: 1   MSQIGRRNEGLRETEMANRTINCKTEVGKPFVALICGSLIYYHCAYRNSSLLSLVADVFI 60

Query: 62  VLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHD 121
           VLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSM+AWLANTIGAAESVLRVAATGHD
Sbjct: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMVAWLANTIGAAESVLRVAATGHD 120

Query: 122 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKVINMHDVLVGPFSR 180
           KRLFVKVVVCLYALSVLGRLVSGVTVAYTG+  L  C+Y  L           + PF R
Sbjct: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCML--CIYMVLENS--ESISASISPFIR 175

[Close]
BLAST of CsGy5G016370 vs. ExPASy TrEMBL
Match: A0A0A0KQM7 (Reticulon domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G487710 PE=4 SV=1)

HSP 1 Score: 292 bits (748), Expect = 1.86e-98
Identity = 155/163 (95.09%), Postives = 157/163 (96.32%), Query Frame = 0 

Query: 1   MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVF 60
           MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVF
Sbjct: 1   MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVF 60

Query: 61  IVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGH 120
           IVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGH
Sbjct: 61  IVLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGH 120

Query: 121 DKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFL 163
           DKRLFVKVVVCLYALSVLGRLVSGVTVAYTG+  L  C+Y  L
Sbjct: 121 DKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCML--CIYMVL 161

[Close]
BLAST of CsGy5G016370 vs. ExPASy TrEMBL
Match: A0A5D3C5B3 (Reticulon-like protein B23 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00160 PE=4 SV=1)

HSP 1 Score: 290 bits (743), Expect = 4.87e-98
Identity = 157/186 (84.41%), Postives = 161/186 (86.56%), Query Frame = 0 

Query: 2   MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFI 61
           MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFI
Sbjct: 1   MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFI 60

Query: 62  VLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHD 121
           VLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAWLANTIGAAESVLRVAATGHD
Sbjct: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120

Query: 122 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKVINMHDVLVGPFSRH 181
           KRLFVKVVVCLYALSVLGRLVSGVTVAYTG                   H  ++  F+RH
Sbjct: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTG-------------------HFSML--FTRH 165

Query: 182 VVKHCS 187
           VVKHCS
Sbjct: 181 VVKHCS 165

[Close]
BLAST of CsGy5G016370 vs. ExPASy TrEMBL
Match: A0A1S3CPH6 (reticulon-like protein B22 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503325 PE=4 SV=1)

HSP 1 Score: 286 bits (733), Expect = 3.46e-96
Identity = 154/179 (86.03%), Postives = 158/179 (88.27%), Query Frame = 0 

Query: 2   MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFI 61
           MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFI
Sbjct: 1   MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFI 60

Query: 62  VLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHD 121
           VLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAWLANTIGAAESVLRVAATGHD
Sbjct: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120

Query: 122 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKVINMHDVLVGPFSR 180
           KRLFVKVVVCLYALSVLGRLVSGVTVAYTG+  L  C+Y  L           + PF R
Sbjct: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCML--CIYMVLENS--ESISAAISPFLR 175

[Close]
BLAST of CsGy5G016370 vs. ExPASy TrEMBL
Match: A0A1S3CQY5 (reticulon-like protein B23 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503325 PE=4 SV=1)

HSP 1 Score: 283 bits (724), Expect = 1.07e-94
Identity = 147/150 (98.00%), Postives = 148/150 (98.67%), Query Frame = 0 

Query: 2   MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFI 61
           MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFI
Sbjct: 1   MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFI 60

Query: 62  VLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHD 121
           VLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAWLANTIGAAESVLRVAATGHD
Sbjct: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120

Query: 122 KRLFVKVVVCLYALSVLGRLVSGVTVAYTG 151
           KRLFVKVVVCLYALSVLGRLVSGVTVAYTG
Sbjct: 121 KRLFVKVVVCLYALSVLGRLVSGVTVAYTG 150

[Close]
BLAST of CsGy5G016370 vs. ExPASy TrEMBL
Match: A0A6J1I734 (reticulon-like protein B22 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471842 PE=4 SV=1)

HSP 1 Score: 267 bits (683), Expect = 1.42e-88
Identity = 143/179 (79.89%), Postives = 154/179 (86.03%), Query Frame = 0 

Query: 2   MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFI 61
           M+QI GR E L+D +MA+RSI+CKTEVGKP VALICGSLVYYHCA+RNSSLLSLVADVFI
Sbjct: 1   MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFI 60

Query: 62  VLLCSLAILGLLFRHMNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHD 121
           VLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAWLANTIGAAESVLRVAATGHD
Sbjct: 61  VLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHD 120

Query: 122 KRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKVINMHDVLVGPFSR 180
           KRLFVKV+V LYALSVLGRLVSGVTVAYTG+  L  C+Y  L           + PF R
Sbjct: 121 KRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCML--CIYMVLENS--ESISAFISPFLR 175

[Close]
BLAST of CsGy5G016370 vs. TAIR 10
Match: AT1G78895.1 (Reticulon family protein )

HSP 1 Score: 195.3 bits (495), Expect = 4.7e-50
Identity = 98/126 (77.78%), Postives = 114/126 (90.48%), Query Frame = 0 

Query: 27  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPL 86
           E+GK    LI G+LVYYHCA+RN++LLSL +DVFIVLLCSLAILGLLFR +NVSVPVDPL
Sbjct: 3   EMGKAMGLLISGTLVYYHCAYRNATLLSLFSDVFIVLLCSLAILGLLFRQLNVSVPVDPL 62

Query: 87  EWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVT 146
           EWQ+SQDTA++++A LANT+GAAE VLRVAATGHDKRLFVKVV+CLY LS LGRL+SGVT
Sbjct: 63  EWQISQDTASNIVARLANTVGAAEGVLRVAATGHDKRLFVKVVICLYFLSALGRLISGVT 122

Query: 147 VAYTGM 153
           VAY G+
Sbjct: 123 VAYAGL 128

[Close]
BLAST of CsGy5G016370 vs. TAIR 10
Match: AT1G16825.1 (Reticulon family protein )

HSP 1 Score: 187.2 bits (474), Expect = 1.3e-47
Identity = 94/126 (74.60%), Postives = 113/126 (89.68%), Query Frame = 0 

Query: 27  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPL 86
           E+GK    LI G+LVY+HCA RN++LLSL++DV IVLL SLAILGLLFRH+NVSVPVDPL
Sbjct: 3   EMGKAIGLLISGTLVYHHCANRNATLLSLISDVLIVLLSSLAILGLLFRHLNVSVPVDPL 62

Query: 87  EWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVT 146
           EWQ+SQDTA +++A LANT+GAAESVLRVAATGHDKRLFVKVV+CLY L+ LGR++SGVT
Sbjct: 63  EWQISQDTACNIVARLANTVGAAESVLRVAATGHDKRLFVKVVICLYFLAALGRIISGVT 122

Query: 147 VAYTGM 153
           +AY G+
Sbjct: 123 IAYAGL 128

The following BLAST results are available for this feature:
BLAST of CsGy5G016370 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8GWH56.6e-4977.78Reticulon-like protein B22 OS=Arabidopsis thaliana OX=3702 GN=RTNLB22 PE=2 SV=1[more]
P0C9411.8e-4674.60Reticulon-like protein B23 OS=Arabidopsis thaliana OX=3702 GN=RTNLB23 PE=2 SV=1[more]
BLAST of CsGy5G016370 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011655303.13.85e-9895.09reticulon-like protein B22 [Cucumis sativus] >KGN51194.1 hypothetical protein Cs... [more]
KAA0040534.11.01e-9784.41reticulon-like protein B23 isoform X1 [Cucumis melo var. makuwa] >TYK05576.1 ret... [more]
XP_008465703.17.15e-9686.03PREDICTED: reticulon-like protein B22 isoform X2 [Cucumis melo][more]
XP_008465702.12.21e-9498.00PREDICTED: reticulon-like protein B23 isoform X1 [Cucumis melo][more]
XP_038889154.12.27e-9282.12reticulon-like protein B22 [Benincasa hispida][more]
BLAST of CsGy5G016370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQM71.86e-9895.09Reticulon domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G487710 P... [more]
A0A5D3C5B34.87e-9884.41Reticulon-like protein B23 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A1S3CPH63.46e-9686.03reticulon-like protein B22 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503325 PE... [more]
A0A1S3CQY51.07e-9498.00reticulon-like protein B23 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503325 PE... [more]
A0A6J1I7341.42e-8879.89reticulon-like protein B22 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11147184... [more]
BLAST of CsGy5G016370 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G78895.14.7e-5077.78Reticulon family protein [more]
AT1G16825.11.3e-4774.60Reticulon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003388ReticulonPFAMPF02453Reticuloncoord: 34..154
e-value: 1.4E-15
score: 57.6
IPR044177Reticulon-like protein B22/B23PANTHERPTHR47879RETICULON-LIKE PROTEIN B22coord: 16..164

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G016370.2CsGy5G016370.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane