CsGy5G015855 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G015855
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr5: 22063424 .. 22064035 (+)
RNA-Seq Expression	CsGy5G015855
Synteny	CsGy5G015855

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGCGCCAATTGAATTTGTTACCTTACAAAGTGAACCAAGAATTGCGTATTGATTATAAAGCTTTTGTATCAATTGATTCAAAAGACTTCAAACGTGTTGTTTTGGAAATAAATGCTCATTCAGGTAATCATTTTTATATTCCAACTACATTCTTCCTTTTGAGATCATCCAATCTATGTTATTATTTGATTTGTAATTATAAATTGTCTTAACTCAATTAAGTTTTACTGTCTCTCTATTTGCCACAGTTTTTGTTAATTTATCAGATTCAGAAGCCACGTTTTCTAATGACAATAAGAAGATTATCTTTACCAAAGAGGTACAAATTTTAGGAATTTTTAATTTATTGATTCAATATGGTGTGAGAGAAAGGTTCGTTCTTAGAAGTAAATTTATTTGATGTTGTGCAGGAAAGGAAATGTATAATTGGAGGTATTAAAAAAGGAAAGGAATATGAAGTTTTAATCACACTTCATCCATTGGTGTTTTTTCTTGATTTGAGCTATCAAGCACAAAGATTGTGGTTGTTCATTCAAAAGGATTTCTCAACTATACTCGTTTTCCCCTCTGGATTGTGGACTCAATTTTGGGTCTATTTCTCTCCTTGA

mRNA sequence

ATGACGCGCCAATTGAATTTGTTACCTTACAAAGTGAACCAAGAATTGCGTATTGATTATAAAGCTTTTGTATCAATTGATTCAAAAGACTTCAAACGTGTTGTTTTGGAAATAAATGCTCATTCAGATTCAGAAGCCACGTTTTCTAATGACAATAAGAAGATTATCTTTACCAAAGAGGAAAGGAAATGTATAATTGGAGGTATTAAAAAAGGAAAGGAATATGAAGTTTTAATCACACTTCATCCATTGGTGTTTTTTCTTGATTTGAGCTATCAAGCACAAAGATTGTGGTTGTTCATTCAAAAGGATTTCTCAACTATACTCGTTTTCCCCTCTGGATTGTGGACTCAATTTTGGGTCTATTTCTCTCCTTGA

Coding sequence (CDS)

ATGACGCGCCAATTGAATTTGTTACCTTACAAAGTGAACCAAGAATTGCGTATTGATTATAAAGCTTTTGTATCAATTGATTCAAAAGACTTCAAACGTGTTGTTTTGGAAATAAATGCTCATTCAGATTCAGAAGCCACGTTTTCTAATGACAATAAGAAGATTATCTTTACCAAAGAGGAAAGGAAATGTATAATTGGAGGTATTAAAAAAGGAAAGGAATATGAAGTTTTAATCACACTTCATCCATTGGTGTTTTTTCTTGATTTGAGCTATCAAGCACAAAGATTGTGGTTGTTCATTCAAAAGGATTTCTCAACTATACTCGTTTTCCCCTCTGGATTGTGGACTCAATTTTGGGTCTATTTCTCTCCTTGA

Protein sequence

MTRQLNLLPYKVNQELRIDYKAFVSIDSKDFKRVVLEINAHSDSEATFSNDNKKIIFTKEERKCIIGGIKKGKEYEVLITLHPLVFFLDLSYQAQRLWLFIQKDFSTILVFPSGLWTQFWVYFSP*

Homology

[Close]

BLAST of CsGy5G015855 vs. NCBI nr
Match: KGN51160.1 (hypothetical protein Csa_008095 [Cucumis sativus])

HSP 1 Score: 249 bits (636), Expect = 3.44e-83
Identity = 125/131 (95.42%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MTRQLNLLPYKVNQELRIDYKAFVSIDSKDFKRVVLEINAHS------DSEATFSNDNKK 60
           MTRQLNLLPYKVNQELRIDYKAFVSIDSKDFKRVVLEINAHS      DSEATFSNDNKK
Sbjct: 1   MTRQLNLLPYKVNQELRIDYKAFVSIDSKDFKRVVLEINAHSVFVNLSDSEATFSNDNKK 60

Query: 61  IIFTKEERKCIIGGIKKGKEYEVLITLHPLVFFLDLSYQAQRLWLFIQKDFSTILVFPSG 120
           IIFTKEERKCIIGGIKKGKEYEVLITLHPLVFFLDLSYQAQRLWLFIQKDFSTILVFPSG
Sbjct: 61  IIFTKEERKCIIGGIKKGKEYEVLITLHPLVFFLDLSYQAQRLWLFIQKDFSTILVFPSG 120

Query: 121 LWTQFWVYFSP 125
           LWTQFWVYFSP
Sbjct: 121 LWTQFWVYFSP 131

[Close]

BLAST of CsGy5G015855 vs. NCBI nr
Match: XP_023006012.1 (uncharacterized protein LOC111498889 [Cucurbita maxima])

HSP 1 Score: 146 bits (368), Expect = 2.64e-41
Identity = 72/130 (55.38%), Postives = 96/130 (73.85%), Query Frame = 0


Query: 1   MTRQLNLLPYKVNQELRIDYKAFVSIDSKDFKRVVLEINAHS------DSEATFSNDNKK 60
           M  +L+ LP ++ +   IDY  FVSIDS+DF+R+VLE++ HS      +S+  FS   K+
Sbjct: 82  MLCELDSLPLELEEMEHIDYGTFVSIDSQDFRRIVLELDVHSVHVSLTNSQVKFSASRKE 141

Query: 61  IIFTKEERKCIIGGIKKGKEYEVLITLHPLVFFLDLSYQAQRLWLFIQKDFSTILVFPSG 120
           I+ TKEER+CIIGG+ +GKE+E  ITLHPLVFF +LSY+A+R WLF+  +FSTI+VFP G
Sbjct: 142 IVLTKEERRCIIGGLAEGKEFEFSITLHPLVFFHELSYKAKRAWLFMSINFSTIIVFPLG 201

Query: 121 LWTQFWVYFS 124
             TQ WVYFS
Sbjct: 202 TSTQCWVYFS 211

[Close]

BLAST of CsGy5G015855 vs. NCBI nr
Match: XP_031744098.1 (uncharacterized protein LOC116404778 [Cucumis sativus])

HSP 1 Score: 144 bits (363), Expect = 1.73e-40
Identity = 65/127 (51.18%), Postives = 94/127 (74.02%), Query Frame = 0


Query: 3   RQLNLLPYKVNQELRIDYKAFVSIDSKDFKRVVLEINAHS------DSEATFSNDNKKII 62
           R+L LL Y ++ +  I+Y  FVSIDS+DF+R+  E+N+ S      +S   F N NK+I 
Sbjct: 79  RRLKLLAYDLDLDGDIEYTTFVSIDSRDFRRIASELNSRSVSVTFTNSRVNFFNKNKEIT 138

Query: 63  FTKEERKCIIGGIKKGKEYEVLITLHPLVFFLDLSYQAQRLWLFIQKDFSTILVFPSGLW 122
           F+KEE +C+IGG+++G+E+  +IT+HPLVFFLDLS Q++R+W  +Q+DFS I++ P GLW
Sbjct: 139 FSKEENQCVIGGVEEGEEFRFIITVHPLVFFLDLSSQSKRVWFLMQRDFSCIMILPLGLW 198

[Close]

BLAST of CsGy5G015855 vs. NCBI nr
Match: XP_023548338.1 (uncharacterized protein LOC111807006 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 140 bits (352), Expect = 1.57e-38
Identity = 67/127 (52.76%), Postives = 96/127 (75.59%), Query Frame = 0


Query: 3   RQLNLLPYKVNQELRIDYKAFVSIDSKDFKRVVLEINAHS------DSEATFSNDNKKII 62
           R+L+LLP +V    +IDY  FVSIDS DF+RV+LE+NA+S      DS   FS  +++I+
Sbjct: 115 RELDLLPSEVENIEQIDYGTFVSIDSHDFRRVLLELNAYSVHVSVTDSRVKFSTTSEEIV 174

Query: 63  FTKEERKCIIGGIKKGKEYEVLITLHPLVFFLDLSYQAQRLWLFIQKDFSTILVFPSGLW 122
           FTKEER+ IIGG+++G+E + LITL+P VFF DLSY+A+R W F+  DFST+++   G++
Sbjct: 175 FTKEERRSIIGGLREGEEVKFLITLYPWVFFHDLSYEAKRAWFFMSNDFSTVIIHFFGIY 234

[Close]

BLAST of CsGy5G015855 vs. NCBI nr
Match: KAG7013724.1 (hypothetical protein SDJN02_23891, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 137 bits (346), Expect = 4.99e-38
Identity = 68/130 (52.31%), Postives = 93/130 (71.54%), Query Frame = 0


Query: 1   MTRQLNLLPYKVNQELRIDYKAFVSIDSKDFKRVVLEINAHS------DSEATFSNDNKK 60
           M  +L+ LP ++ +  +IDY  FVSIDS+DF+R+VLE++ HS      DS+  F    K+
Sbjct: 78  MLCELDSLPLELEEMEQIDYGTFVSIDSQDFRRIVLELDVHSVHVSLTDSQVKFGASRKE 137

Query: 61  IIFTKEERKCIIGGIKKGKEYEVLITLHPLVFFLDLSYQAQRLWLFIQKDFSTILVFPSG 120
           I+ TKEER+CIIGG+ +G+ +E  ITL PL FF +LSY+A+R WLF+  +FSTI+VFP G
Sbjct: 138 IVLTKEERQCIIGGLAEGEGFEFSITLRPLAFFHELSYKAKRAWLFMSINFSTIIVFPLG 197

Query: 121 LWTQFWVYFS 124
             TQ WVYFS
Sbjct: 198 TRTQCWVYFS 207

[Close]

BLAST of CsGy5G015855 vs. ExPASy TrEMBL
Match: A0A0A0KNE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G469020 PE=4 SV=1)

HSP 1 Score: 249 bits (636), Expect = 1.66e-83
Identity = 125/131 (95.42%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MTRQLNLLPYKVNQELRIDYKAFVSIDSKDFKRVVLEINAHS------DSEATFSNDNKK 60
           MTRQLNLLPYKVNQELRIDYKAFVSIDSKDFKRVVLEINAHS      DSEATFSNDNKK
Sbjct: 1   MTRQLNLLPYKVNQELRIDYKAFVSIDSKDFKRVVLEINAHSVFVNLSDSEATFSNDNKK 60

Query: 61  IIFTKEERKCIIGGIKKGKEYEVLITLHPLVFFLDLSYQAQRLWLFIQKDFSTILVFPSG 120
           IIFTKEERKCIIGGIKKGKEYEVLITLHPLVFFLDLSYQAQRLWLFIQKDFSTILVFPSG
Sbjct: 61  IIFTKEERKCIIGGIKKGKEYEVLITLHPLVFFLDLSYQAQRLWLFIQKDFSTILVFPSG 120

Query: 121 LWTQFWVYFSP 125
           LWTQFWVYFSP
Sbjct: 121 LWTQFWVYFSP 131

[Close]

BLAST of CsGy5G015855 vs. ExPASy TrEMBL
Match: A0A6J1KUR4 (uncharacterized protein LOC111498889 OS=Cucurbita maxima OX=3661 GN=LOC111498889 PE=4 SV=1)

HSP 1 Score: 146 bits (368), Expect = 1.28e-41
Identity = 72/130 (55.38%), Postives = 96/130 (73.85%), Query Frame = 0


Query: 1   MTRQLNLLPYKVNQELRIDYKAFVSIDSKDFKRVVLEINAHS------DSEATFSNDNKK 60
           M  +L+ LP ++ +   IDY  FVSIDS+DF+R+VLE++ HS      +S+  FS   K+
Sbjct: 82  MLCELDSLPLELEEMEHIDYGTFVSIDSQDFRRIVLELDVHSVHVSLTNSQVKFSASRKE 141

Query: 61  IIFTKEERKCIIGGIKKGKEYEVLITLHPLVFFLDLSYQAQRLWLFIQKDFSTILVFPSG 120
           I+ TKEER+CIIGG+ +GKE+E  ITLHPLVFF +LSY+A+R WLF+  +FSTI+VFP G
Sbjct: 142 IVLTKEERRCIIGGLAEGKEFEFSITLHPLVFFHELSYKAKRAWLFMSINFSTIIVFPLG 201

Query: 121 LWTQFWVYFS 124
             TQ WVYFS
Sbjct: 202 TSTQCWVYFS 211

[Close]

BLAST of CsGy5G015855 vs. ExPASy TrEMBL
Match: A0A0A0K9W8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002330 PE=4 SV=1)

HSP 1 Score: 144 bits (363), Expect = 2.43e-40
Identity = 65/127 (51.18%), Postives = 94/127 (74.02%), Query Frame = 0


Query: 3   RQLNLLPYKVNQELRIDYKAFVSIDSKDFKRVVLEINAHS------DSEATFSNDNKKII 62
           R+L LL Y ++ +  I+Y  FVSIDS+DF+R+  E+N+ S      +S   F N NK+I 
Sbjct: 118 RRLKLLAYDLDLDGDIEYTTFVSIDSRDFRRIASELNSRSVSVTFTNSRVNFFNKNKEIT 177

Query: 63  FTKEERKCIIGGIKKGKEYEVLITLHPLVFFLDLSYQAQRLWLFIQKDFSTILVFPSGLW 122
           F+KEE +C+IGG+++G+E+  +IT+HPLVFFLDLS Q++R+W  +Q+DFS I++ P GLW
Sbjct: 178 FSKEENQCVIGGVEEGEEFRFIITVHPLVFFLDLSSQSKRVWFLMQRDFSCIMILPLGLW 237

[Close]

BLAST of CsGy5G015855 vs. ExPASy TrEMBL
Match: A0A6J1H487 (uncharacterized protein LOC111460007 OS=Cucurbita moschata OX=3662 GN=LOC111460007 PE=4 SV=1)

HSP 1 Score: 137 bits (346), Expect = 2.48e-38
Identity = 65/127 (51.18%), Postives = 95/127 (74.80%), Query Frame = 0


Query: 3   RQLNLLPYKVNQELRIDYKAFVSIDSKDFKRVVLEINAHS------DSEATFSNDNKKII 62
           R+L+LLP +V    +IDY  FVSIDS DF+RV+ E+NA+S      DS   FS  +++I+
Sbjct: 82  RELDLLPLEVENIEQIDYGTFVSIDSHDFRRVLFELNAYSVHVSVTDSRVKFSTTSEEIV 141

Query: 63  FTKEERKCIIGGIKKGKEYEVLITLHPLVFFLDLSYQAQRLWLFIQKDFSTILVFPSGLW 122
           FTK+ER+ IIGG+++G+E + LITL+P VFF DLSY+A+R W F+  DFST+++   G++
Sbjct: 142 FTKDERRSIIGGLREGEEVKFLITLYPWVFFHDLSYEAKRAWFFMSNDFSTVIIHFFGIY 201

[Close]

BLAST of CsGy5G015855 vs. ExPASy TrEMBL
Match: A0A6J1L0Z0 (uncharacterized protein LOC111498891 OS=Cucurbita maxima OX=3661 GN=LOC111498891 PE=4 SV=1)

HSP 1 Score: 138 bits (347), Expect = 4.30e-38
Identity = 67/127 (52.76%), Postives = 96/127 (75.59%), Query Frame = 0


Query: 3   RQLNLLPYKVNQELRIDYKAFVSIDSKDFKRVVLEINAHS------DSEATFSNDNKKII 62
           R+L+LLP +V +  +IDY  FVSIDS DF+RV+LE+NA+S      DS+  FS  + +I+
Sbjct: 115 RELDLLPLEVEKIEQIDYGTFVSIDSHDFRRVLLELNAYSVHVSVTDSQVKFSTSSDEIV 174

Query: 63  FTKEERKCIIGGIKKGKEYEVLITLHPLVFFLDLSYQAQRLWLFIQKDFSTILVFPSGLW 122
           FTKEER+ IIGG+++G+E + LITL+PLVFF DLSY+A+R W F+  +FS++++   G+ 
Sbjct: 175 FTKEERRSIIGGLREGEEVKFLITLYPLVFFHDLSYEAKRAWFFMSNNFSSVIIHFFGIS 234

The following BLAST results are available for this feature:

BLAST of CsGy5G015855 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy5G015855 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN51160.1	3.44e-83	95.42	hypothetical protein Csa_008095 [Cucumis sativus]	[more]
XP_023006012.1	2.64e-41	55.38	uncharacterized protein LOC111498889 [Cucurbita maxima]	[more]
XP_031744098.1	1.73e-40	51.18	uncharacterized protein LOC116404778 [Cucumis sativus]	[more]
XP_023548338.1	1.57e-38	52.76	uncharacterized protein LOC111807006 [Cucurbita pepo subsp. pepo]	[more]
KAG7013724.1	4.99e-38	52.31	hypothetical protein SDJN02_23891, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CsGy5G015855 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNE7	1.66e-83	95.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G469020 PE=4 SV=1	[more]
A0A6J1KUR4	1.28e-41	55.38	uncharacterized protein LOC111498889 OS=Cucurbita maxima OX=3661 GN=LOC111498889...	[more]
A0A0A0K9W8	2.43e-40	51.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002330 PE=4 SV=1	[more]
A0A6J1H487	2.48e-38	51.18	uncharacterized protein LOC111460007 OS=Cucurbita moschata OX=3662 GN=LOC1114600...	[more]
A0A6J1L0Z0	4.30e-38	52.76	uncharacterized protein LOC111498891 OS=Cucurbita maxima OX=3661 GN=LOC111498891...	[more]

BLAST of CsGy5G015855 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.70.10.10		coord: 4..125 e-value: 2.8E-5 score: 25.5
None	No IPR available	SUPERFAMILY	55979	DNA clamp	coord: 17..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G015855.1	CsGy5G015855.1	mRNA