CsGy5G014367 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G014367
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr5: 19718708 .. 19719062 (-)
RNA-Seq ExpressionCsGy5G014367
SyntenyCsGy5G014367
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCTACCAAAACCCACCATCTTCTTCTTCCTTCGTTAGCCTAGCACCTGCCACCATTAACCTTCTCTCCGTCGTCGTTCGCCGATTTCTCTTCTTGGCCTTGTCTGTTGGTGTTTAGATGAAGTCGTGTCGCCCACTCTATCGTTGTTGTCATGTCTCCATTCACTATCCAGCCAAGTCTATTGTCTTTGTCTTCAAGCCGAAACCCATATGAATCCTTTCATTTTGTGTTGCATGTCATGTCCGAGCCCTTCCACCTTCGCATGCCACCATCCGCACCAAGCTTCCTTTATTCAAGCTTTGTTTCACATGTTCGTAGACGAGCTAGTTCTCCTTTCATTCGAGCCATTTGA

mRNA sequence

ATGCTCTACCAAAACCCACCATCTTCTTCTTCCTTCGTTAGCCTAGCACCTGCCACCATTAACCTTCTCTCCGTCGTCGTTCGCCGATTTCTCTTCTTGGCCTTCCGAAACCCATATGAATCCTTTCATTTTGTGTTGCATGTCATGTCCGAGCCCTTCCACCTTCGCATGCCACCATCCGCACCAAGCTTCCTTTATTCAAGCTTTGTTTCACATGTTCGTAGACGAGCTAGTTCTCCTTTCATTCGAGCCATTTGA

Coding sequence (CDS)

ATGCTCTACCAAAACCCACCATCTTCTTCTTCCTTCGTTAGCCTAGCACCTGCCACCATTAACCTTCTCTCCGTCGTCGTTCGCCGATTTCTCTTCTTGGCCTTCCGAAACCCATATGAATCCTTTCATTTTGTGTTGCATGTCATGTCCGAGCCCTTCCACCTTCGCATGCCACCATCCGCACCAAGCTTCCTTTATTCAAGCTTTGTTTCACATGTTCGTAGACGAGCTAGTTCTCCTTTCATTCGAGCCATTTGA

Protein sequence

MLYQNPPSSSSFVSLAPATINLLSVVVRRFLFLAFRNPYESFHFVLHVMSEPFHLRMPPSAPSFLYSSFVSHVRRRASSPFIRAI*
Homology
[Close]
BLAST of CsGy5G014367 vs. NCBI nr
Match: KGN50991.1 (hypothetical protein Csa_008426 [Cucumis sativus])

HSP 1 Score: 168 bits (425), Expect = 2.34e-52
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 

Query: 1  MLYQNPPSSSSFVSLAPATINLLSVVVRRFLFLAFRNPYESFHFVLHVMSEPFHLRMPPS 60
          MLYQNPPSSSSFVSLAPATINLLSVVVRRFLFLAFRNPYESFHFVLHVMSEPFHLRMPPS
Sbjct: 1  MLYQNPPSSSSFVSLAPATINLLSVVVRRFLFLAFRNPYESFHFVLHVMSEPFHLRMPPS 60

Query: 61 APSFLYSSFVSHVRRRASSPFIRAI 85
          APSFLYSSFVSHVRRRASSPFIRAI
Sbjct: 61 APSFLYSSFVSHVRRRASSPFIRAI 85

[Close]
BLAST of CsGy5G014367 vs. ExPASy TrEMBL
Match: A0A0A0KTI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G387420 PE=4 SV=1)

HSP 1 Score: 168 bits (425), Expect = 1.13e-52
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 

Query: 1  MLYQNPPSSSSFVSLAPATINLLSVVVRRFLFLAFRNPYESFHFVLHVMSEPFHLRMPPS 60
          MLYQNPPSSSSFVSLAPATINLLSVVVRRFLFLAFRNPYESFHFVLHVMSEPFHLRMPPS
Sbjct: 1  MLYQNPPSSSSFVSLAPATINLLSVVVRRFLFLAFRNPYESFHFVLHVMSEPFHLRMPPS 60

Query: 61 APSFLYSSFVSHVRRRASSPFIRAI 85
          APSFLYSSFVSHVRRRASSPFIRAI
Sbjct: 61 APSFLYSSFVSHVRRRASSPFIRAI 85

The following BLAST results are available for this feature:
BLAST of CsGy5G014367 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy5G014367 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50991.12.34e-52100.00hypothetical protein Csa_008426 [Cucumis sativus][more]
BLAST of CsGy5G014367 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTI31.13e-52100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G387420 PE=4 SV=1[more]
BLAST of CsGy5G014367 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G014367.1CsGy5G014367.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane