CsGy5G012470 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G012470
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	FAM192A_Fyv6_N domain-containing protein
Location	Gy14Chr5: 14758155 .. 14764201 (-)
RNA-Seq Expression	CsGy5G012470
Synteny	CsGy5G012470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAGTCGAAAGAGGCAAGAGCTTGCAAGTGATCTGGTAATGTCGTAAACCCTTTTTGGCCTTTTCCTTTCTGTTAAATTTTGAAGTGTTGGAACTGGAGAGCAAGCGATAATGGAGGATGAATCTTCGCGAGCAATTAGGCTTATGAATTTCGTCTCTGAGGAGCAGGTTTTTCCTCGTCCTCCTCCTTTCCTTTGATTAATTCATACAATATTTTGGATTCTCCTTTTCAAATCAATGCTAATATATCGATTTTTGCAGCTGGATGAAGCCAAGAAAACAAGGGGCGAACGAGTTGAGGATGGCACTGCTCAAAGAGACAGACCCCTCTTCGAGGTTCTTCATTGACTATTCACTTTTACACCTGAATATATATTCTTTTAGTATAACGAAAAAGGAAATGTTTGTTTTCTTAGATGGGGTAGTGAACATTTAGTTTTTTTTGAAAGAATCCCTTCACCTTCAGTGTAAACTCAAGTTATTTCATATATATATCCTTATGTACAGTAAGTTATTTAGAAGCATATGATTTGACCTATTGCAGCTAGATAGTGGTGGGAGATTTTACCGATGAACACGTCAGTTGGCTGTCATTCCAAACATTTGGAAACCCCACTGTCATTAGAGGCCTTTCTCATTTACAAGCTCCGATGCCATATGAAAATTAGGTTTTTGGCTTGGCAGGCTTGGAATGTCCCTTTGACAATTGAGTTTTAGCATTTAATTGTTACTTAATGCCGAAAATAATCGAGTAATTAAGAGACATAACATTAAGTTGTTGAGATAGAATTATGGATCAATGAAAGTTTGTGGAGTTGTTTAACTAAGAAAAGTTCATTTTCAAATTTTTTTTTAGATAAGAAACATGTATATTCATTGAACAAAAGAGAACATCCTAATAGCAAGGGACAAGAGGGCCCTCCCCAACAGAAACTAAAGTATTATGTCCTTCCAATTGTTGAATGCATTCGAATTATTTCATTCTATACAAATTAACGAGGACATTGAGTCTTATGTCATTATTCTTTGTGATTGGTATATAGCAGTTGCTAATCACTTTCTCTTTTATGATGTAAACGCTTAAGTGAAGTTTGAACCAATGATATCAAATAATGATTTTTCCTTCAATTATTTATAACTTGAAAATAAGAAAGGAGTTGTCTACTATGATCTATCGATGTTACCTACACTTTATGACAAGGCACACAATAAACAAGTAATAATTTAGAAAATTGAACACACAAGATTGTTAACCCATTTCGATGAAAATATACCTATGTCAGAACGACGTCCCATAAAAGATAACTTCACTAATATCAATAATCGACAATTAAAACGTAGTACTTTTCTGTAAAGCTAACTTTGTTACAGTGACCTCCAAACAATACTATCACTTAGCTGACTACCTAGGCTTCCCCTAAGATGAAGACTCCCTCTCTTAGCAACTTAGGCTCTCCCTAAGCTAGAATTGGTGAAGAATGTCTTAGGCTCCCTCTTTGCAGTAGAATTAGTGAAGAATGTCTTAGGGCTCCCCCTAAGACCAAGGCTCCCTCTCTGCTAGACTCGAGCTCCCCTCAATTCATGATTGTCCCTCTCACTTGAATTCTATCTTTCCTTTCAAGAACAAATTTCCCTTTGTTCAAATATCTTAGGCCCCCCGAGCTTTGAGAAACTCTACCGAGGTGAATTAAGAACCACGAGCTGTAAGAAAAATGGAGCAAGTCTCCAAGAAGTGTAGCACTCTCACAATCATAAGTTAAATGCGACCAAACACTAGTATAATGAATTGCACTATTGCTTATTCTACTTCAATGAAAATGGCCAACCCAGTTGAAGGACCAAGTGTTCCTTAAATATGTACAATGGAATCATGAAGAAGCTGCCCTACTTTCCAAAACGGTCACTCACTGAAATAGGAAGAAGACCGATAAAATTATTGCAAAAAGGAAATACTCGATAAGGAAAGTATTTTGCAAAATTTGCATCTCCGGAAAACATCCTGATGTCAAACAGGCACTGATGCAAAGACACAGTTAATAACAACTGATCATCTTAACCAAATATTGCCAACTTCACAGAATCTAACATAACTATATTTTTTATATTAGCACTTCAGTTGTTTTTGGGAGCCTAAATCCTTTGTACAGTCTGTTTTGTAATCTTTCATTCTTCTCAATGAATGTAGTAATGTTTACATGTATGCACTCTGTGTATGAGCATTTGAATGCATAGAGTTAAGCAGTTTAATTGTTGTTAACTACGTTTCTCTTTTTATTTTCACAGATTTTAAAGGAAAATAAAGACAAGCGTGATGCTGAGTTTAATGAACGGTTCAAGCACAGTGAGTGCTGAAGTGTAATTTCAATCTTGTCTTGATATTACTCATTTAATTGTTATTATTATTTTTCTAATGAAAAAACTGGACTTTCGTTGAGAAGAAAATGAAAAGTACATGCCCATGCTGAAAATGATAAGCTCACAAAAAAGGAGCCAATTACAGGAAGGGGCTCCGGTCTAGTAAAATGAGACCTAGTGAGTAATTACAGGAAGCCTACACAATGGACCAAACATCCCTACTGGATCTTACCCTCCCTTGAAGATTTTATTTATTTCTCTAGTCTCACAAACACAACAATATAGGACAAACCCCAACATGCCACAAAAACAACAATTTTTCACAAAAAAGTGGATGGAGGGGAAGCTCTCCAATTGTCACTTGAGCAAAATTGCAACTTTTGAGGATATGATCTTGATCAATATCCTCAGTCGCCTTCTTGCGAAGAATTCAATAACGAGGCCCAACCACTTATACCTCCCAAAAATAATTATCCCTCCCACTGCCCACCACATTATGAATAAACTTGAGAAAGAAAAGGAAATATTGCCAAGATATCTTTCGAGTTTTTGGAAGTGCCTTTTAACCCCTCCATCTGTTCAATCAAAGGGATGAGGTCCATAGACTCCATACTTGCAAATAATAAACTTGTGCTATAAAGTGTGAACTTCATGATAGAATCGCAAGAGTCGTTTAATCAACTGGGCCGTACTTCTATAACTAACATTACTAATGCTCCACAGAAACCTACCTCTCAATGCACTAGATTTGGCTCATTTTCCTCATCAACCCCCTTCCCATAAGAAATTGCTCATCAACTTCTCAAGAGCCTTACATCCATGCCATTATGCAATGATTAAAATTCATGCTTATTCAGCTCTTTTACTTCAGGACCACCAAAGGCTCTGGACGAGGATGAGACAGAATTTCTGGATAAATTGGAAACGGTGAGTTTATTTGTTTTACACCCATTACCCATTAGCATCTTCTTTCTTTTCTTTTAAATTTTATTGTCAATTGACATGCAGTCAAAGAGAGAATATGAAAGGCAAATGGCCAATGCTGAGGAACAAGAGCTCCGCAGTTTTCAAGTAACTATTCTGCTTTTCCAAATAAGTGAAACTCTCTCTGTTACTTGTGTTTCTTTTTCAAATTATTGATATATTTAATGCTAGATTCAAATTTATGACAGCACTCTGAAGAATTGTTTGCTAATCAACTGTAATTTCATCTGTTAGCACTTCAGTATGTGATTATTGTGTGTGCTATTGCTACGTTGTCTCCTTAATAGTAATGACAATCAATTAATGTAATGCACTATACTAACTAGCCGGAAAAATATGCTCCTATGTGTGCTTTGTGCACAGCTGGAGAGGAGGCACCTTTACAAGTGCACTTCTCCTTACCATTGGGGAATAGGTATGCAAAAACATGGAAATGAGATTGAAGATAGATATTATGACAACTACAAGTGTAATGACAAGGAATATGGAAAGTGAACAAACACAAGTTTTACGAGGAAACCCTAGTTTAGGGAGAAAAACTTCAGTGCAAATATTTCTTATTATTTTCTTATTAAAACTAATCATACAAAGGAACATTAATTTATAGGCAATAGAAGCATAATTAAAATAATGAATGATAATTAGGGCAACATAAAAGACTAAAAGATCTTTGGGTTTTAACATACAACAAGTCTGCTAATTCTAACAGAAACAACAATTTTCATTGAGATAAAATGAAATAGTACAAAGGCAGAAGCCCACCAAAACACCCTAACCTATAAGAAGGGGTTCCAACTGAGTAAAACGTTTCCAATGGAATAGTTACAAAAGGACTTCAAAATCGAAGCCCAAAGGGACACGTAAAATCCAACCAAAGACCAAACCTCACTATGATCCATTTTCCTACTACGAAATTACCAAAGTCTGTTGCATGTCTTTTGAATCATTGTTCTTGAGAGATCCACACTACTTGAATTTTGTTTGTTTGTAAAAGTTAATTTTTTATCTTTTAGATATTATGTGCTGATTTTCTTTATTGTTTGCCGACTGAAGCTCCACTTTCTCTTGTGCATTACGCTGAAGTGTTAGAGTCAACTCACTTCTCATGGTTCCAAGAACATCTCATTATTGTAACAATTTATTAAATATTTGTATAGTAGTGACCAACAGGTGAACTATTATCTTTCTCTATAGTCTAAATTTGTTACCACAAGAGATCATCCTTGTGTGATCTGGGTATATAAGTTATCTCCAGCAGTAGTTTAGCTCTAAGATCAACAAGTACTGAATAAATGATGGCAGTTCTTTGGTGAGTTTTCGGTCATCAAGGAGGTTCATATCAAGTGAATCAATTTTCCCATTCATTCCAAGTGCTTCCTTCCAACAAAAGCTGTCAGATGTGGCCCTGGGCTTAGTTCACATGTTTTTGCTTAGTGTTGTGTATGGAAAATTCCCACGACCCTTTATAGTTGGAATATTGCTGATGATAGGCCTGGCCTGTCTTTTCTCAACAACTTTTTAATATCTCATGAAGACTGCGTAAAAATGAGCAAGAGCAACAAGTTTTAAACAACTGTCACAGTTGTAATTCTATTTTAGGTTGCCTGTTGCTTTCTGCTTAGTAATATTACTTCTTGTACACGTTGTATATCCGTAGTGTACTAGACGCAGGTGCTCACTCTATAAATTTCTTCTCAAGCACTATTTCTTGGTGTTCTTTCAGGCAGCAGTAGCAGCACAATCTATTTTGTTGAGTGAAGTGAGGGAAATAACCCCTCCTGCTCCAGCAGCTCAGGTAGCCACATCATGAATAATCAATCTTTTATGGTATTGATATGTATTACTATTGATTTAGGGTTCATCTGGATTGACATTCTAAGTGCTTGATAACGCTTATTTAAGCACTTAGAAAGTTAATCCAAACACGTCTTTAGACTGCCTCAAATAGAAAGAATCAAAGTCATAAATTCTAAATATACTCACGGATGTTGCAGACTCTTTCATTGTTGGGTATTTTATTGGAATATGAACTGTGCTAAATATTGGTGGCTAGCTTGTAGACGTGTATTCTATCCAATGTTTTTGTACACAAGGGTGTGAGTACATTCATCGGACCGGTGTGTTCTTTTCAGTCAAGATGTGATCAAGCTGCTGTAAATGAAGCTTCTGTTAAATAACCACCTAATGTAATCCTGAATTGTATGCAGGAAAAAGCATCAGTTAGGAGAGAAACTCCAGTCAGTCGACCCCCAAGTATGATTATCAGAGTAAAGCCACAGGCAAAGAAAGCGAGGATTGAACCTAGAAGCCCAAAAATCGCTGGTAGCACAACTGAAATCCATGTTGCCAAAGCAGAGGAGACTTCAAACTCAGTGAAAACACTTGATACCAATAGTGATAGGCCGCTGGAAGCTGGTGCTATAACAGGACTAGTTTCATATAGTGATGAAAGTGAAGATGAAGATTAGAGGATTGAGTTGGCTATTAGAATCTCCGAAACAATCACCCTATTGAATTTAATTTTTTGAGTTGAGGTTCTGAAATGATGAATCTTTTTCTGTAGATTGTCAACTTTTAATATGTATGTATATCTTCTAACCCCTCATTGTATAAATGTTTTAGGCAATCCTCAAGGTTGAAATTTTTATGAAATATTGAGGCTGGATTTCCATCTATTGTACTTATTTGATCAAGGCTATACTTGATTC

mRNA sequence

CAAAGTCGAAAGAGGCAAGAGCTTGCAAGTGATCTGGTAATGTCGTAAACCCTTTTTGGCCTTTTCCTTTCTGTTAAATTTTGAAGTGTTGGAACTGGAGAGCAAGCGATAATGGAGGATGAATCTTCGCGAGCAATTAGGCTTATGAATTTCGTCTCTGAGGAGCAGCTGGATGAAGCCAAGAAAACAAGGGGCGAACGAGTTGAGGATGGCACTGCTCAAAGAGACAGACCCCTCTTCGAGATTTTAAAGGAAAATAAAGACAAGCGTGATGCTGAGTTTAATGAACGGTTCAAGCACAGACCACCAAAGGCTCTGGACGAGGATGAGACAGAATTTCTGGATAAATTGGAAACGTCAAAGAGAGAATATGAAAGGCAAATGGCCAATGCTGAGGAACAAGAGCTCCGCAGTTTTCAAGCAGCAGTAGCAGCACAATCTATTTTGTTGAGTGAAGTGAGGGAAATAACCCCTCCTGCTCCAGCAGCTCAGGAAAAAGCATCAGTTAGGAGAGAAACTCCAGTCAGTCGACCCCCAAGTATGATTATCAGAGTAAAGCCACAGGCAAAGAAAGCGAGGATTGAACCTAGAAGCCCAAAAATCGCTGGTAGCACAACTGAAATCCATGTTGCCAAAGCAGAGGAGACTTCAAACTCAGTGAAAACACTTGATACCAATAGTGATAGGCCGCTGGAAGCTGGTGCTATAACAGGACTAGTTTCATATAGTGATGAAAGTGAAGATGAAGATTAGAGGATTGAGTTGGCTATTAGAATCTCCGAAACAATCACCCTATTGAATTTAATTTTTTGAGTTGAGGTTCTGAAATGATGAATCTTTTTCTGTAGATTGTCAACTTTTAATATGTATGTATATCTTCTAACCCCTCATTGTATAAATGTTTTAGGCAATCCTCAAGGTTGAAATTTTTATGAAATATTGAGGCTGGATTTCCATCTATTGTACTTATTTGATCAAGGCTATACTTGATTC

Coding sequence (CDS)

ATGGAGGATGAATCTTCGCGAGCAATTAGGCTTATGAATTTCGTCTCTGAGGAGCAGCTGGATGAAGCCAAGAAAACAAGGGGCGAACGAGTTGAGGATGGCACTGCTCAAAGAGACAGACCCCTCTTCGAGATTTTAAAGGAAAATAAAGACAAGCGTGATGCTGAGTTTAATGAACGGTTCAAGCACAGACCACCAAAGGCTCTGGACGAGGATGAGACAGAATTTCTGGATAAATTGGAAACGTCAAAGAGAGAATATGAAAGGCAAATGGCCAATGCTGAGGAACAAGAGCTCCGCAGTTTTCAAGCAGCAGTAGCAGCACAATCTATTTTGTTGAGTGAAGTGAGGGAAATAACCCCTCCTGCTCCAGCAGCTCAGGAAAAAGCATCAGTTAGGAGAGAAACTCCAGTCAGTCGACCCCCAAGTATGATTATCAGAGTAAAGCCACAGGCAAAGAAAGCGAGGATTGAACCTAGAAGCCCAAAAATCGCTGGTAGCACAACTGAAATCCATGTTGCCAAAGCAGAGGAGACTTCAAACTCAGTGAAAACACTTGATACCAATAGTGATAGGCCGCTGGAAGCTGGTGCTATAACAGGACTAGTTTCATATAGTGATGAAAGTGAAGATGAAGATTAG

Protein sequence

MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMANAEEQELRSFQAAVAAQSILLSEVREITPPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSTTEIHVAKAEETSNSVKTLDTNSDRPLEAGAITGLVSYSDESEDED*

Homology

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BLAST of CsGy5G012470 vs. ExPASy Swiss-Prot
Match: Q91WE2 (PSME3-interacting protein OS=Mus musculus OX=10090 GN=Psme3ip1 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.4e-06
Identity = 41/115 (35.65%), Postives = 63/115 (54.78%), Query Frame = 0


Query: 2   EDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRD-----------RPLFEILKENK 61
           ED+S+  I+   FVSE +LDE +K R E  E      D           R L+E L+E K
Sbjct: 4   EDDSNLVIK-KRFVSEAELDERRKRRQEEWEKVRKPEDPKECPEEAYDPRSLYERLQEQK 63

Query: 62  DKRDAEFNERFKHR-PPKALDEDETEFLDKLETSKREYERQMANAEEQELRSFQA 105
           D++  E+ E+FK +   + LDEDET FLD++   +   E+Q    E +EL+ +++
Sbjct: 64  DRKQQEYEEQFKFKNMVRGLDEDETNFLDEVSRQQELIEKQRREEELEELKEYRS 117

[Close]

BLAST of CsGy5G012470 vs. NCBI nr
Match: XP_004149477.1 (PSME3-interacting protein [Cucumis sativus] >KGN49781.1 hypothetical protein Csa_004657 [Cucumis sativus])

HSP 1 Score: 385 bits (990), Expect = 2.26e-134
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNER 60
           MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNER
Sbjct: 1   MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMANAEEQELRSFQAAVAAQSILLSEVREIT 120
           FKHRPPKALDEDETEFLDKLETSKREYERQMANAEEQELRSFQAAVAAQSILLSEVREIT
Sbjct: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMANAEEQELRSFQAAVAAQSILLSEVREIT 120

Query: 121 PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSTTEIHVAKAEETS 180
           PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSTTEIHVAKAEETS
Sbjct: 121 PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSTTEIHVAKAEETS 180

Query: 181 NSVKTLDTNSDRPLEAGAITGLVSYSDESEDED 213
           NSVKTLDTNSDRPLEAGAITGLVSYSDESEDED
Sbjct: 181 NSVKTLDTNSDRPLEAGAITGLVSYSDESEDED 213

[Close]

BLAST of CsGy5G012470 vs. NCBI nr
Match: XP_008466362.1 (PREDICTED: protein FAM192A [Cucumis melo] >KAA0050273.1 protein FAM192A [Cucumis melo var. makuwa])

HSP 1 Score: 368 bits (945), Expect = 1.63e-127
Identity = 205/213 (96.24%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 1   MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNER 60
           MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILK+NKDKRDAEFNER
Sbjct: 1   MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKDNKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMANAEEQELRSFQAAVAAQSILLSEVREIT 120
           FKHRPPKALDEDETEFLDKLETSKREYERQMA+AEEQELRSFQAAVAAQSILL+EVREIT
Sbjct: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQAAVAAQSILLNEVREIT 120

Query: 121 PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSTTEIHVAKAEETS 180
           PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGS TEI VAKAEE S
Sbjct: 121 PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSITEIPVAKAEEPS 180

Query: 181 NSVKTLDTNSDRPLEAGAITGLVSYSDESEDED 213
            SVKTLDTNSDRPLEA AITGLVSYSDESEDED
Sbjct: 181 KSVKTLDTNSDRPLEAAAITGLVSYSDESEDED 213

[Close]

BLAST of CsGy5G012470 vs. NCBI nr
Match: TYJ98134.1 (protein FAM192A [Cucumis melo var. makuwa])

HSP 1 Score: 368 bits (945), Expect = 4.71e-127
Identity = 205/213 (96.24%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 1   MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNER 60
           MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILK+NKDKRDAEFNER
Sbjct: 31  MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKDNKDKRDAEFNER 90

Query: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMANAEEQELRSFQAAVAAQSILLSEVREIT 120
           FKHRPPKALDEDETEFLDKLETSKREYERQMA+AEEQELRSFQAAVAAQSILL+EVREIT
Sbjct: 91  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQAAVAAQSILLNEVREIT 150

Query: 121 PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSTTEIHVAKAEETS 180
           PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGS TEI VAKAEE S
Sbjct: 151 PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSITEIPVAKAEEPS 210

Query: 181 NSVKTLDTNSDRPLEAGAITGLVSYSDESEDED 213
            SVKTLDTNSDRPLEA AITGLVSYSDESEDED
Sbjct: 211 KSVKTLDTNSDRPLEAAAITGLVSYSDESEDED 243

[Close]

BLAST of CsGy5G012470 vs. NCBI nr
Match: XP_022938625.1 (uncharacterized protein LOC111444804 [Cucurbita moschata])

HSP 1 Score: 339 bits (869), Expect = 6.18e-116
Identity = 189/213 (88.73%), Postives = 200/213 (93.90%), Query Frame = 0


Query: 1   MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNER 60
           MEDES+RAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILKENKDKRDAEFNER
Sbjct: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMANAEEQELRSFQAAVAAQSILLSEVREIT 120
           FKHRPPKALDEDETEFLDK ETSKREYERQMA+A+EQELRSFQAAVAAQSILLSEVREIT
Sbjct: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120

Query: 121 PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSTTEIHVAKAEETS 180
           PPAPAAQEKA VR+ETPV+RPPSMIIRVKPQAKKARIEPRSP+ AGS  EI  AKAEE+S
Sbjct: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEESS 180

Query: 181 NSVKTLDTNSDRPLEAGAITGLVSYSDESEDED 213
            SV+T DT+SDRPLEA    GLVSYSDESEDED
Sbjct: 181 ESVRTHDTSSDRPLEAATTIGLVSYSDESEDED 213

[Close]

BLAST of CsGy5G012470 vs. NCBI nr
Match: XP_023549588.1 (protein FAM192A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 338 bits (868), Expect = 8.78e-116
Identity = 189/213 (88.73%), Postives = 199/213 (93.43%), Query Frame = 0


Query: 1   MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNER 60
           MEDES+RAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILKENKDKRDAEFNER
Sbjct: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMANAEEQELRSFQAAVAAQSILLSEVREIT 120
           FKHRPPKALDEDETEFLDK ETSKREYERQMA+A+EQELRSFQAAVAAQSILLSEVREIT
Sbjct: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120

Query: 121 PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSTTEIHVAKAEETS 180
           PPAPAAQEKA VR+ETPV+RPPSMIIRVKPQAKKARIEPRSP+ AGS  EI  AKAEE S
Sbjct: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEIPNAKAEEDS 180

Query: 181 NSVKTLDTNSDRPLEAGAITGLVSYSDESEDED 213
            SV+T DT+SDRPLEA    GLVSYSDESEDED
Sbjct: 181 ESVRTHDTSSDRPLEAATTIGLVSYSDESEDED 213

[Close]

BLAST of CsGy5G012470 vs. ExPASy TrEMBL
Match: A0A0A0KPX8 (FAM192A_Fyv6_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G125710 PE=4 SV=1)

HSP 1 Score: 385 bits (990), Expect = 1.09e-134
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNER 60
           MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNER
Sbjct: 1   MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMANAEEQELRSFQAAVAAQSILLSEVREIT 120
           FKHRPPKALDEDETEFLDKLETSKREYERQMANAEEQELRSFQAAVAAQSILLSEVREIT
Sbjct: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMANAEEQELRSFQAAVAAQSILLSEVREIT 120

Query: 121 PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSTTEIHVAKAEETS 180
           PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSTTEIHVAKAEETS
Sbjct: 121 PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSTTEIHVAKAEETS 180

Query: 181 NSVKTLDTNSDRPLEAGAITGLVSYSDESEDED 213
           NSVKTLDTNSDRPLEAGAITGLVSYSDESEDED
Sbjct: 181 NSVKTLDTNSDRPLEAGAITGLVSYSDESEDED 213

[Close]

BLAST of CsGy5G012470 vs. ExPASy TrEMBL
Match: A0A5A7U2Y6 (Protein FAM192A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold355G001250 PE=4 SV=1)

HSP 1 Score: 368 bits (945), Expect = 7.89e-128
Identity = 205/213 (96.24%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 1   MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNER 60
           MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILK+NKDKRDAEFNER
Sbjct: 1   MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKDNKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMANAEEQELRSFQAAVAAQSILLSEVREIT 120
           FKHRPPKALDEDETEFLDKLETSKREYERQMA+AEEQELRSFQAAVAAQSILL+EVREIT
Sbjct: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQAAVAAQSILLNEVREIT 120

Query: 121 PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSTTEIHVAKAEETS 180
           PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGS TEI VAKAEE S
Sbjct: 121 PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSITEIPVAKAEEPS 180

Query: 181 NSVKTLDTNSDRPLEAGAITGLVSYSDESEDED 213
            SVKTLDTNSDRPLEA AITGLVSYSDESEDED
Sbjct: 181 KSVKTLDTNSDRPLEAAAITGLVSYSDESEDED 213

[Close]

BLAST of CsGy5G012470 vs. ExPASy TrEMBL
Match: A0A1S3CR24 (protein FAM192A OS=Cucumis melo OX=3656 GN=LOC103503791 PE=4 SV=1)

HSP 1 Score: 368 bits (945), Expect = 7.89e-128
Identity = 205/213 (96.24%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 1   MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNER 60
           MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILK+NKDKRDAEFNER
Sbjct: 1   MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKDNKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMANAEEQELRSFQAAVAAQSILLSEVREIT 120
           FKHRPPKALDEDETEFLDKLETSKREYERQMA+AEEQELRSFQAAVAAQSILL+EVREIT
Sbjct: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQAAVAAQSILLNEVREIT 120

Query: 121 PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSTTEIHVAKAEETS 180
           PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGS TEI VAKAEE S
Sbjct: 121 PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSITEIPVAKAEEPS 180

Query: 181 NSVKTLDTNSDRPLEAGAITGLVSYSDESEDED 213
            SVKTLDTNSDRPLEA AITGLVSYSDESEDED
Sbjct: 181 KSVKTLDTNSDRPLEAAAITGLVSYSDESEDED 213

[Close]

BLAST of CsGy5G012470 vs. ExPASy TrEMBL
Match: A0A5D3BGC9 (Protein FAM192A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00120 PE=4 SV=1)

HSP 1 Score: 368 bits (945), Expect = 2.28e-127
Identity = 205/213 (96.24%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 1   MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNER 60
           MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILK+NKDKRDAEFNER
Sbjct: 31  MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKDNKDKRDAEFNER 90

Query: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMANAEEQELRSFQAAVAAQSILLSEVREIT 120
           FKHRPPKALDEDETEFLDKLETSKREYERQMA+AEEQELRSFQAAVAAQSILL+EVREIT
Sbjct: 91  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQAAVAAQSILLNEVREIT 150

Query: 121 PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSTTEIHVAKAEETS 180
           PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGS TEI VAKAEE S
Sbjct: 151 PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSITEIPVAKAEEPS 210

Query: 181 NSVKTLDTNSDRPLEAGAITGLVSYSDESEDED 213
            SVKTLDTNSDRPLEA AITGLVSYSDESEDED
Sbjct: 211 KSVKTLDTNSDRPLEAAAITGLVSYSDESEDED 243

[Close]

BLAST of CsGy5G012470 vs. ExPASy TrEMBL
Match: A0A6J1FKA5 (uncharacterized protein LOC111444804 OS=Cucurbita moschata OX=3662 GN=LOC111444804 PE=4 SV=1)

HSP 1 Score: 339 bits (869), Expect = 2.99e-116
Identity = 189/213 (88.73%), Postives = 200/213 (93.90%), Query Frame = 0


Query: 1   MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNER 60
           MEDES+RAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILKENKDKRDAEFNER
Sbjct: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMANAEEQELRSFQAAVAAQSILLSEVREIT 120
           FKHRPPKALDEDETEFLDK ETSKREYERQMA+A+EQELRSFQAAVAAQSILLSEVREIT
Sbjct: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120

Query: 121 PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSTTEIHVAKAEETS 180
           PPAPAAQEKA VR+ETPV+RPPSMIIRVKPQAKKARIEPRSP+ AGS  EI  AKAEE+S
Sbjct: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEESS 180

Query: 181 NSVKTLDTNSDRPLEAGAITGLVSYSDESEDED 213
            SV+T DT+SDRPLEA    GLVSYSDESEDED
Sbjct: 181 ESVRTHDTSSDRPLEAATTIGLVSYSDESEDED 213

[Close]

BLAST of CsGy5G012470 vs. TAIR 10
Match: AT3G62140.1 (CONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (InterPro:IPR019331); Has 398 Blast hits to 395 proteins in 139 species: Archae - 0; Bacteria - 6; Metazoa - 193; Fungi - 83; Plants - 36; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). )

HSP 1 Score: 212.6 bits (540), Expect = 3.1e-55
Identity = 130/219 (59.36%), Postives = 159/219 (72.60%), Query Frame = 0


Query: 1   MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNER 60
           M DE+ + IRL+NFVSEEQLDE+KK RGERVEDGT QRDR L+EILKENKDK+DAEFNER
Sbjct: 1   MVDETEKPIRLLNFVSEEQLDESKKERGERVEDGTFQRDRALYEILKENKDKKDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMANAEEQELRSFQAAVAAQSILLSEVRE-- 120
           FKHRPPKALDEDETEFLDKLE SKREYERQ+AN E+++LR+FQAAVAA+S +L E +E  
Sbjct: 61  FKHRPPKALDEDETEFLDKLEMSKREYERQLANEEDEQLRNFQAAVAARSAILHEPKEAA 120

Query: 121 ITPPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKAR-IEPRSPKIAGS---TTEIHVA 180
           + PPAP  +E+  + +  P +RP   II+VKPQ KKA+  E    +I G+    + I  A
Sbjct: 121 LPPPAPVTKEQKPIGKRNPATRPFKAIIKVKPQPKKAKATEKEEKEIPGNGKPASHIDQA 180

Query: 181 KAEETSNSVKTLDTNSDRPLEAGAITGLVSYSDESEDED 214
             +    +V    T     L+ G    LVSYSDESED+D
Sbjct: 181 SLDSVKGNVTGKTTEG---LQTG--LALVSYSDESEDDD 214

The following BLAST results are available for this feature:

BLAST of CsGy5G012470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91WE2	4.4e-06	35.65	PSME3-interacting protein OS=Mus musculus OX=10090 GN=Psme3ip1 PE=1 SV=1	[more]

BLAST of CsGy5G012470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149477.1	2.26e-134	100.00	PSME3-interacting protein [Cucumis sativus] >KGN49781.1 hypothetical protein Csa...	[more]
XP_008466362.1	1.63e-127	96.24	PREDICTED: protein FAM192A [Cucumis melo] >KAA0050273.1 protein FAM192A [Cucumis...	[more]
TYJ98134.1	4.71e-127	96.24	protein FAM192A [Cucumis melo var. makuwa]	[more]
XP_022938625.1	6.18e-116	88.73	uncharacterized protein LOC111444804 [Cucurbita moschata]	[more]
XP_023549588.1	8.78e-116	88.73	protein FAM192A [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy5G012470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPX8	1.09e-134	100.00	FAM192A_Fyv6_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G125...	[more]
A0A5A7U2Y6	7.89e-128	96.24	Protein FAM192A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold355G0012...	[more]
A0A1S3CR24	7.89e-128	96.24	protein FAM192A OS=Cucumis melo OX=3656 GN=LOC103503791 PE=4 SV=1	[more]
A0A5D3BGC9	2.28e-127	96.24	Protein FAM192A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G0012...	[more]
A0A6J1FKA5	2.99e-116	88.73	uncharacterized protein LOC111444804 OS=Cucurbita moschata OX=3662 GN=LOC1114448...	[more]

BLAST of CsGy5G012470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62140.1	3.1e-55	59.36	CONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 77..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..143
None	No IPR available	PANTHER	PTHR13495:SF1	BNAC06G18360D PROTEIN	coord: 1..213
IPR019331	FAM192A/Fyv6, N-terminal	PFAM	PF10187	FAM192A_Fyv6_N	coord: 21..102 e-value: 7.3E-16 score: 58.4
IPR039845	PSME3-interacting protein	PANTHER	PTHR13495	NEFA-INTERACTING NUCLEAR PROTEIN NIP30	coord: 1..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G012470.2	CsGy5G012470.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus