CsGy5G012095 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G012095
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	AIG1-type G domain-containing protein
Location	Gy14Chr5: 14366984 .. 14367298 (+)
RNA-Seq Expression	CsGy5G012095
Synteny	CsGy5G012095

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAATGGAGTTAGACATCAAAATGGAGGTAAAGCCTACACTCATGGTCTATTTTCTAGTATCAAGTTTGAGACCAAGTTGCAAGATGTGAAAACCAAGCTTGAACAACTACCGGAGACTGAGAGACAAGCTAGATTGAAAGCAAAAGAGAGAACACAAGAAATTCAAAAAAAATCCACAAAAGAAATCCGAGTCCTCAACGATCGTCTACGCGTTGCTCTTGAAAGGCCACCGCGGCCAGCACAACAACCACCACCTCCACCTCCGAGAGGCCGCAAAGGCGGAGGCGGAGGCTCTTGTTTTATTCTATAG

mRNA sequence

ATGGTGAATGGAGTTAGACATCAAAATGGAGGTAAAGCCTACACTCATGGTCTATTTTCTAGTATCAAGTTTGAGACCAAGTTGCAAGATGTGAAAACCAAGCTTGAACAACTACCGGAGACTGAGAGACAAGCTAGATTGAAAGCAAAAGAGAGAACACAAGAAATTCAAAAAAAATCCACAAAAGAAATCCGAGTCCTCAACGATCGTCTACGCGTTGCTCTTGAAAGGCCACCGCGGCCAGCACAACAACCACCACCTCCACCTCCGAGAGGCCGCAAAGGCGGAGGCGGAGGCTCTTGTTTTATTCTATAG

Coding sequence (CDS)

ATGGTGAATGGAGTTAGACATCAAAATGGAGGTAAAGCCTACACTCATGGTCTATTTTCTAGTATCAAGTTTGAGACCAAGTTGCAAGATGTGAAAACCAAGCTTGAACAACTACCGGAGACTGAGAGACAAGCTAGATTGAAAGCAAAAGAGAGAACACAAGAAATTCAAAAAAAATCCACAAAAGAAATCCGAGTCCTCAACGATCGTCTACGCGTTGCTCTTGAAAGGCCACCGCGGCCAGCACAACAACCACCACCTCCACCTCCGAGAGGCCGCAAAGGCGGAGGCGGAGGCTCTTGTTTTATTCTATAG

Protein sequence

MVNGVRHQNGGKAYTHGLFSSIKFETKLQDVKTKLEQLPETERQARLKAKERTQEIQKKSTKEIRVLNDRLRVALERPPRPAQQPPPPPPRGRKGGGGGSCFIL*

Homology

[Close]

BLAST of CsGy5G012095 vs. NCBI nr
Match: KAE8648285.1 (hypothetical protein Csa_017841 [Cucumis sativus])

HSP 1 Score: 127 bits (320), Expect = 3.82e-36
Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1  MVNGVRHQNGGKAYTHGLFSSIKFETKLQDVKTKLEQLPETERQARLKAKERTQEIQKKS 60
          MVNGVRHQNGGKAYTHGLFSSIKFETKLQDVKTKLEQL E ERQARLKA+ERTQEIQKKS
Sbjct: 1  MVNGVRHQNGGKAYTHGLFSSIKFETKLQDVKTKLEQLLEPERQARLKAEERTQEIQKKS 60

Query: 61 TKEIRVLNDRLRV 73
          TKEIRVLNDRLR+
Sbjct: 61 TKEIRVLNDRLRL 73

[Close]

BLAST of CsGy5G012095 vs. NCBI nr
Match: XP_011654528.1 (immune-associated nucleotide-binding protein 9 [Cucumis sativus] >KGN49740.1 hypothetical protein Csa_017835 [Cucumis sativus])

HSP 1 Score: 122 bits (306), Expect = 1.81e-31
Identity = 68/90 (75.56%), Postives = 77/90 (85.56%), Query Frame = 0


Query: 1   MVNGVRHQNGGKAYTHGLFSSIKFETKLQDVKTKLEQLPETERQARLKAKERTQEIQKKS 60
           MV+GV  QNGGKAYTHGLFS+IKFETKLQDVKTKLEQ  E E QARLKA+++ QEIQ++S
Sbjct: 188 MVHGVVQQNGGKAYTHGLFSNIKFETKLQDVKTKLEQQLEFEIQARLKAEQKAQEIQQQS 247

Query: 61  TKEIRVLNDRLRVALERPPRPAQQPPPPPP 90
           T +IRVLNDRLR+ALERPP     PPPPPP
Sbjct: 248 TDQIRVLNDRLRIALERPP---MTPPPPPP 274

[Close]

BLAST of CsGy5G012095 vs. NCBI nr
Match: XP_038907035.1 (immune-associated nucleotide-binding protein 9-like [Benincasa hispida] >XP_038907036.1 immune-associated nucleotide-binding protein 9-like [Benincasa hispida] >XP_038907037.1 immune-associated nucleotide-binding protein 9-like [Benincasa hispida])

HSP 1 Score: 118 bits (295), Expect = 9.40e-30
Identity = 68/94 (72.34%), Postives = 77/94 (81.91%), Query Frame = 0


Query: 1   MVNGVRHQNGGKAYTHGLFSSIKFETKLQDVKTKLEQLPETERQARLKAKERTQEIQKKS 60
           MVNGV  QNGGKAYTH LFS++KFETKLQDVKTKLEQ  E ERQARL+A++R QE + KS
Sbjct: 202 MVNGVVQQNGGKAYTHALFSNLKFETKLQDVKTKLEQQLECERQARLEAEQRMQEFKNKS 261

Query: 61  TKEIRVLNDRLRVALERPPRPAQQPPPPPPRGRK 94
            +EI+VLNDRLR ALERP  P   PPPPPPR R+
Sbjct: 262 IEEIQVLNDRLRDALERPLPP---PPPPPPRMRQ 292

[Close]

BLAST of CsGy5G012095 vs. NCBI nr
Match: XP_008466867.1 (PREDICTED: protein AIG1-like [Cucumis melo])

HSP 1 Score: 116 bits (290), Expect = 3.74e-29
Identity = 70/105 (66.67%), Postives = 82/105 (78.10%), Query Frame = 0


Query: 1   MVNGVRHQNGGKAYTHGLFSSIKFETKLQDVKTKLEQLPETERQARLKAKERTQEIQKKS 60
           MV+GV  QNGGKAYTHGLFS++KFE KLQDVKTKLEQ  E E QARLKA++R QEIQ++S
Sbjct: 188 MVHGVVQQNGGKAYTHGLFSNVKFEAKLQDVKTKLEQQLEFETQARLKAEQRAQEIQQQS 247

Query: 61  TKEIRVLNDRLRVALERPPRPAQQPPPPPPR-GRKGGGGGSCFIL 104
             +IRVLNDRLR+ALE+PP     PPP   R GR+GG G  C I+
Sbjct: 248 IDQIRVLNDRLRIALEKPP-----PPPQIIRHGRRGGRG--CVIV 285

[Close]

BLAST of CsGy5G012095 vs. NCBI nr
Match: KAA0067609.1 (protein AIG1-like [Cucumis melo var. makuwa])

HSP 1 Score: 115 bits (287), Expect = 2.70e-28
Identity = 69/107 (64.49%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 1   MVNGVRHQNGGKAYTHGLFSSIKFETKLQDVKTKLEQLPETERQARLKAKERTQEIQKKS 60
           MV+GV  QNGGKAYTHGLFS++KFE KLQDVKTKLEQ  E E QARLKA++R QEIQ++S
Sbjct: 129 MVHGVVQQNGGKAYTHGLFSNVKFEAKLQDVKTKLEQQLEFETQARLKAEQRAQEIQQQS 188

Query: 61  TKEIRVLNDRLRVALERPPRPAQQPPPPPPR----GRKGGGGGSCFI 103
             +IRVLNDRLR+ALE+PP        PPP+    GR+GG G  C I
Sbjct: 189 IDQIRVLNDRLRIALEKPP--------PPPQIIHHGRRGGRG--CVI 225

[Close]

BLAST of CsGy5G012095 vs. ExPASy TrEMBL
Match: A0A0A0KMU6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G097970 PE=4 SV=1)

HSP 1 Score: 191 bits (485), Expect = 3.14e-61
Identity = 100/104 (96.15%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 1   MVNGVRHQNGGKAYTHGLFSSIKFETKLQDVKTKLEQLPETERQARLKAKERTQEIQKKS 60
           MVNGVRHQNGGKAYTHGLFSSIKFETKLQDVKTKLEQL E ERQARLKA+ERTQEIQKKS
Sbjct: 1   MVNGVRHQNGGKAYTHGLFSSIKFETKLQDVKTKLEQLLEPERQARLKAEERTQEIQKKS 60

Query: 61  TKEIRVLNDRLRVALERPPRPAQQPPPPPPRGRKGGGGGSCFIL 104
           TKEIRVLNDRLRVALERPPRPAQQPPPPPPRG KGGGGGSCFIL
Sbjct: 61  TKEIRVLNDRLRVALERPPRPAQQPPPPPPRGGKGGGGGSCFIL 104

[Close]

BLAST of CsGy5G012095 vs. ExPASy TrEMBL
Match: A0A0A0KJ27 (AIG1-type G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G097460 PE=4 SV=1)

HSP 1 Score: 122 bits (306), Expect = 8.76e-32
Identity = 68/90 (75.56%), Postives = 77/90 (85.56%), Query Frame = 0


Query: 1   MVNGVRHQNGGKAYTHGLFSSIKFETKLQDVKTKLEQLPETERQARLKAKERTQEIQKKS 60
           MV+GV  QNGGKAYTHGLFS+IKFETKLQDVKTKLEQ  E E QARLKA+++ QEIQ++S
Sbjct: 188 MVHGVVQQNGGKAYTHGLFSNIKFETKLQDVKTKLEQQLEFEIQARLKAEQKAQEIQQQS 247

Query: 61  TKEIRVLNDRLRVALERPPRPAQQPPPPPP 90
           T +IRVLNDRLR+ALERPP     PPPPPP
Sbjct: 248 TDQIRVLNDRLRIALERPP---MTPPPPPP 274

[Close]

BLAST of CsGy5G012095 vs. ExPASy TrEMBL
Match: A0A1S3CS82 (protein AIG1-like OS=Cucumis melo OX=3656 GN=LOC103504177 PE=4 SV=1)

HSP 1 Score: 116 bits (290), Expect = 1.81e-29
Identity = 70/105 (66.67%), Postives = 82/105 (78.10%), Query Frame = 0


Query: 1   MVNGVRHQNGGKAYTHGLFSSIKFETKLQDVKTKLEQLPETERQARLKAKERTQEIQKKS 60
           MV+GV  QNGGKAYTHGLFS++KFE KLQDVKTKLEQ  E E QARLKA++R QEIQ++S
Sbjct: 188 MVHGVVQQNGGKAYTHGLFSNVKFEAKLQDVKTKLEQQLEFETQARLKAEQRAQEIQQQS 247

Query: 61  TKEIRVLNDRLRVALERPPRPAQQPPPPPPR-GRKGGGGGSCFIL 104
             +IRVLNDRLR+ALE+PP     PPP   R GR+GG G  C I+
Sbjct: 248 IDQIRVLNDRLRIALEKPP-----PPPQIIRHGRRGGRG--CVIV 285

[Close]

BLAST of CsGy5G012095 vs. ExPASy TrEMBL
Match: A0A5A7VR40 (Protein AIG1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold485G00770 PE=4 SV=1)

HSP 1 Score: 115 bits (287), Expect = 1.31e-28
Identity = 69/107 (64.49%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 1   MVNGVRHQNGGKAYTHGLFSSIKFETKLQDVKTKLEQLPETERQARLKAKERTQEIQKKS 60
           MV+GV  QNGGKAYTHGLFS++KFE KLQDVKTKLEQ  E E QARLKA++R QEIQ++S
Sbjct: 129 MVHGVVQQNGGKAYTHGLFSNVKFEAKLQDVKTKLEQQLEFETQARLKAEQRAQEIQQQS 188

Query: 61  TKEIRVLNDRLRVALERPPRPAQQPPPPPPR----GRKGGGGGSCFI 103
             +IRVLNDRLR+ALE+PP        PPP+    GR+GG G  C I
Sbjct: 189 IDQIRVLNDRLRIALEKPP--------PPPQIIHHGRRGGRG--CVI 225

[Close]

BLAST of CsGy5G012095 vs. ExPASy TrEMBL
Match: A0A5D3BCX8 (Protein AIG1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00280 PE=4 SV=1)

HSP 1 Score: 115 bits (287), Expect = 1.31e-28
Identity = 69/107 (64.49%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 1   MVNGVRHQNGGKAYTHGLFSSIKFETKLQDVKTKLEQLPETERQARLKAKERTQEIQKKS 60
           MV+GV  QNGGKAYTHGLFS++KFE KLQDVKTKLEQ  E E QARLKA++R QEIQ++S
Sbjct: 129 MVHGVVQQNGGKAYTHGLFSNVKFEAKLQDVKTKLEQQLEFETQARLKAEQRAQEIQQQS 188

Query: 61  TKEIRVLNDRLRVALERPPRPAQQPPPPPPR----GRKGGGGGSCFI 103
             +IRVLNDRLR+ALE+PP        PPP+    GR+GG G  C I
Sbjct: 189 IDQIRVLNDRLRIALEKPP--------PPPQIIHHGRRGGRG--CVI 225

The following BLAST results are available for this feature:

BLAST of CsGy5G012095 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy5G012095 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648285.1	3.82e-36	94.52	hypothetical protein Csa_017841 [Cucumis sativus]	[more]
XP_011654528.1	1.81e-31	75.56	immune-associated nucleotide-binding protein 9 [Cucumis sativus] >KGN49740.1 hyp...	[more]
XP_038907035.1	9.40e-30	72.34	immune-associated nucleotide-binding protein 9-like [Benincasa hispida] >XP_0389...	[more]
XP_008466867.1	3.74e-29	66.67	PREDICTED: protein AIG1-like [Cucumis melo]	[more]
KAA0067609.1	2.70e-28	64.49	protein AIG1-like [Cucumis melo var. makuwa]	[more]

BLAST of CsGy5G012095 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMU6	3.14e-61	96.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G097970 PE=4 SV=1	[more]
A0A0A0KJ27	8.76e-32	75.56	AIG1-type G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G097460...	[more]
A0A1S3CS82	1.81e-29	66.67	protein AIG1-like OS=Cucumis melo OX=3656 GN=LOC103504177 PE=4 SV=1	[more]
A0A5A7VR40	1.31e-28	64.49	Protein AIG1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold485G00...	[more]
A0A5D3BCX8	1.31e-28	64.49	Protein AIG1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00...	[more]

BLAST of CsGy5G012095 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G012095.1	CsGy5G012095.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005525	GTP binding