CsGy5G012070 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G012070
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr5: 14312776 .. 14313705 (+)
RNA-Seq ExpressionCsGy5G012070
SyntenyCsGy5G012070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCTGCATAGGGTGCTAAAAGCCATATGCTATTGTGTTTTTCCATATATACCTCACCATTGTAGCTCAAACTTAGTGTTGATAATTGCCCAAGAGGTTGTTTGGTTCGTTATAGGAGCTCTCCTACACCTTTATCGACTAATTTGTGGTTGATCATGAAGCCTTGCACTCGTTTACGCAATTGTTCTTAGTGCGCTAGTGATAAGACGAGGTACTTTGAGATTACATCATGCATTTCAAAGTTGAGACACTAAAAATGGAAGAGTGCTCCAAAGATACTATTTGCTTAGCCCTTGTTGTTAGCCTCCTCCATTCATTAAGCTTCAACCTCCTACGCTAAAATCTTGTCTCGAGCTTAGAGGCATATCACAGCAACTAAGCCTGTCGAGGCAAGTGGGTCGTAAAGGGGGGAAAATTTGTCGCACTGAGTCAAAGAGCATGAACAACCTAATGATTCCATGCTATATGACTTTCATGTTCCCACCCAAGCTAAAAAAAAAAACAATGATGTTGGGCATAAGTGGTACACCTTTGTTCATTGACCTATTCACCAGATCTTGGGTTGCAATGGAGGAATGTAGGATTCTCACATGGGAAAAAGAAAAAAACAAACCGTCTGCCTTGAGTTGTAGGGATTATAACGAATATTGTAAGTTTCTTCACAATCACAAGCACAACATGGGTGGTTGTGTTACCCTTAAAGATCAAATTGAAGAGGTCATGCGCCTAAAGAAAATTTTGACAATCTTTTAAGGATTGCCTAGAGGACCCATTGGGCAAAAAAGAAAAGGTTGATCCTTAAGAGACTTGTAGAGAATAGCCCGAAGGAATTTTCCTAGTCAAGACGATAAAATTGAGTTGGTTGATCGACTTCATCGAAGAAAGAGACATAGATCCACCTCCATTTGCACAACGATGCCCTGGTAA

mRNA sequence

ATGGAGCTGCATAGGGTGCTAAAAGCCATATGCTATTGTGTTTTTCCATATATACCTCACCATTGTAGCTCAAACTTAGTGTTGATAATTGCCCAAGAGCCTCCTCCATTCATTAAGCTTCAACCTCCTACGCTAAAATCTTGTCTCGAGCTTAGAGGCATATCACAGCAACTAAGCCTGTCGAGGCAAGTGGGTCGTAAAGGGGGGAAAATTTGTCGCACTGAGTCAAAGAGCATGAACAACCTAATGATTCCATGCTATATGACTTTCATGTTCCCACCCAAGCTAAAAAAAAAAACAATGATGTTGGGCATAAGTGGTACACCTTTGTTCATTGACCTATTCACCAGATCTTGGGTTGCAATGGAGGAATGTAGGATTCTCACATGGGAAAAAGAAAAAAACAAACCGTCTGCCTTGAGTTGTAGGGATTATAACGAATATTGTAAGTTTCTTCACAATCACAAGCACAACATGGGTGGTTGTGTTACCCTTAAAGATCAAATTGAAGAGGATTGCCTAGAGGACCCATTGGGCAAAAAAGAAAAGAGAATAGCCCGAAGGAATTTTCCTAGTCAAGACGATAAAATTGAGTTGGTTGATCGACTTCATCGAAGAAAGAGACATAGATCCACCTCCATTTGCACAACGATGCCCTGGTAA

Coding sequence (CDS)

ATGGAGCTGCATAGGGTGCTAAAAGCCATATGCTATTGTGTTTTTCCATATATACCTCACCATTGTAGCTCAAACTTAGTGTTGATAATTGCCCAAGAGCCTCCTCCATTCATTAAGCTTCAACCTCCTACGCTAAAATCTTGTCTCGAGCTTAGAGGCATATCACAGCAACTAAGCCTGTCGAGGCAAGTGGGTCGTAAAGGGGGGAAAATTTGTCGCACTGAGTCAAAGAGCATGAACAACCTAATGATTCCATGCTATATGACTTTCATGTTCCCACCCAAGCTAAAAAAAAAAACAATGATGTTGGGCATAAGTGGTACACCTTTGTTCATTGACCTATTCACCAGATCTTGGGTTGCAATGGAGGAATGTAGGATTCTCACATGGGAAAAAGAAAAAAACAAACCGTCTGCCTTGAGTTGTAGGGATTATAACGAATATTGTAAGTTTCTTCACAATCACAAGCACAACATGGGTGGTTGTGTTACCCTTAAAGATCAAATTGAAGAGGATTGCCTAGAGGACCCATTGGGCAAAAAAGAAAAGAGAATAGCCCGAAGGAATTTTCCTAGTCAAGACGATAAAATTGAGTTGGTTGATCGACTTCATCGAAGAAAGAGACATAGATCCACCTCCATTTGCACAACGATGCCCTGGTAA

Protein sequence

MELHRVLKAICYCVFPYIPHHCSSNLVLIIAQEPPPFIKLQPPTLKSCLELRGISQQLSLSRQVGRKGGKICRTESKSMNNLMIPCYMTFMFPPKLKKKTMMLGISGTPLFIDLFTRSWVAMEECRILTWEKEKNKPSALSCRDYNEYCKFLHNHKHNMGGCVTLKDQIEEDCLEDPLGKKEKRIARRNFPSQDDKIELVDRLHRRKRHRSTSICTTMPW*
Homology
[Close]
BLAST of CsGy5G012070 vs. NCBI nr
Match: KGN49737.1 (hypothetical protein Csa_017837 [Cucumis sativus])

HSP 1 Score: 417 bits (1073), Expect = 5.57e-147
Identity = 203/219 (92.69%), Postives = 205/219 (93.61%), Query Frame = 0 

Query: 1   MELHRVLKAICYCVFPYIPHHCSSNLVLIIAQEPPPFIKLQPPTLKSCLELRGISQQLSL 60
           MELHRVLKAICYCVFPYIPHHCSSNLVLIIAQEPPPFIKLQPPTLKSCLELRGISQQLS+
Sbjct: 1   MELHRVLKAICYCVFPYIPHHCSSNLVLIIAQEPPPFIKLQPPTLKSCLELRGISQQLSM 60

Query: 61  SRQVGRKGGKICRTESKSMNNLMIPCYMTFMFPPKLKKKTMMLGISGTPLFIDLFTRSWV 120
           SRQVGRKGGKICRTESKSMNNLMIPCYMTFMFPPKLKKKTMMLGISGTPLFIDLFTRSWV
Sbjct: 61  SRQVGRKGGKICRTESKSMNNLMIPCYMTFMFPPKLKKKTMMLGISGTPLFIDLFTRSWV 120

Query: 121 AMEECRILTWEKEKNKPSALSCRDYNEYCKFLHNHKHNMGGCVTLKDQIEEDCLEDPLGK 180
           AMEECRILTWEKEKNKPSALSCRDYNEYCKFLHNHKHNMGGCVTLKDQIEE         
Sbjct: 121 AMEECRILTWEKEKNKPSALSCRDYNEYCKFLHNHKHNMGGCVTLKDQIEE--------- 180

Query: 181 KEKRIARRNFPSQDDKIELVDRLHRRKRHRSTSICTTMP 219
              RIARR+F SQDDKIE VDRLHRRKRHRSTSICTTMP
Sbjct: 181 ---RIARRSFASQDDKIEPVDRLHRRKRHRSTSICTTMP 207

[Close]
BLAST of CsGy5G012070 vs. ExPASy TrEMBL
Match: A0A0A0KMU0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G092950 PE=4 SV=1)

HSP 1 Score: 417 bits (1073), Expect = 2.69e-147
Identity = 203/219 (92.69%), Postives = 205/219 (93.61%), Query Frame = 0 

Query: 1   MELHRVLKAICYCVFPYIPHHCSSNLVLIIAQEPPPFIKLQPPTLKSCLELRGISQQLSL 60
           MELHRVLKAICYCVFPYIPHHCSSNLVLIIAQEPPPFIKLQPPTLKSCLELRGISQQLS+
Sbjct: 1   MELHRVLKAICYCVFPYIPHHCSSNLVLIIAQEPPPFIKLQPPTLKSCLELRGISQQLSM 60

Query: 61  SRQVGRKGGKICRTESKSMNNLMIPCYMTFMFPPKLKKKTMMLGISGTPLFIDLFTRSWV 120
           SRQVGRKGGKICRTESKSMNNLMIPCYMTFMFPPKLKKKTMMLGISGTPLFIDLFTRSWV
Sbjct: 61  SRQVGRKGGKICRTESKSMNNLMIPCYMTFMFPPKLKKKTMMLGISGTPLFIDLFTRSWV 120

Query: 121 AMEECRILTWEKEKNKPSALSCRDYNEYCKFLHNHKHNMGGCVTLKDQIEEDCLEDPLGK 180
           AMEECRILTWEKEKNKPSALSCRDYNEYCKFLHNHKHNMGGCVTLKDQIEE         
Sbjct: 121 AMEECRILTWEKEKNKPSALSCRDYNEYCKFLHNHKHNMGGCVTLKDQIEE--------- 180

Query: 181 KEKRIARRNFPSQDDKIELVDRLHRRKRHRSTSICTTMP 219
              RIARR+F SQDDKIE VDRLHRRKRHRSTSICTTMP
Sbjct: 181 ---RIARRSFASQDDKIEPVDRLHRRKRHRSTSICTTMP 207

The following BLAST results are available for this feature:
BLAST of CsGy5G012070 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy5G012070 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49737.15.57e-14792.69hypothetical protein Csa_017837 [Cucumis sativus][more]
BLAST of CsGy5G012070 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMU02.69e-14792.69Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G092950 PE=4 SV=1[more]
BLAST of CsGy5G012070 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G012070.2CsGy5G012070.2mRNA