CsGy5G011975 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G011975
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr5: 14188762 .. 14188950 (+)
RNA-Seq ExpressionCsGy5G011975
SyntenyCsGy5G011975
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGATAGTTCTTCCACAACTAAAGCTAAGCGGTCCTTATTCTCGGATCCCTCTCACCTTTCTCCTCTCCGGTCGAGATATTCTAACCCCACGGAGCGGTAGCATCGTCGGTTTTCAAGCTTTAGAAGTTCCTGCCCCCGTAGCGGTTATGGAGTCTCTTTACCATATAGCTCTATCATACGACCAATAG

mRNA sequence

CTGATAGTTCTTCCACAACTAAAGCTAAGCGGTCCTTATTCTCGGATCCCTCTCACCTTTCTCCTCTCCGGTCGAGATATTCTAACCCCACGGAGCGGTAGCATCGTCGGTTTTCAAGCTTTAGAAGTTCCTGCCCCCGTAGCGGTTATGGAGTCTCTTTACCATATAGCTCTATCATACGACCAATAG

Coding sequence (CDS)

CTGATAGTTCTTCCACAACTAAAGCTAAGCGGTCCTTATTCTCGGATCCCTCTCACCTTTCTCCTCTCCGGTCGAGATATTCTAACCCCACGGAGCGGTAGCATCGTCGGTTTTCAAGCTTTAGAAGTTCCTGCCCCCGTAGCGGTTATGGAGTCTCTTTACCATATAGCTCTATCATACGACCAATAG

Protein sequence

LIVLPQLKLSGPYSRIPLTFLLSGRDILTPRSGSIVGFQALEVPAPVAVMESLYHIALSYDQ*
Homology
[Close]
BLAST of CsGy5G011975 vs. NCBI nr
Match: KAE8648274.1 (hypothetical protein Csa_017794 [Cucumis sativus])

HSP 1 Score: 117 bits (293), Expect = 9.81e-33
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1  LIVLPQLKLSGPYSRIPLTFLLSGRDILTPRSGSIVGFQALEVPAPVAVMESLYHIALSY 60
          LIVLPQLKLS PYSRIPLTFLLSGRDILTPRSGSI+GFQ+LEVPAPVAVMESLYHIALSY
Sbjct: 16 LIVLPQLKLSDPYSRIPLTFLLSGRDILTPRSGSIIGFQSLEVPAPVAVMESLYHIALSY 75

Query: 61 DQ 62
          DQ
Sbjct: 76 DQ 77

The following BLAST results are available for this feature:
BLAST of CsGy5G011975 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy5G011975 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8648274.19.81e-3395.16hypothetical protein Csa_017794 [Cucumis sativus][more]
BLAST of CsGy5G011975 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsGy5G011975 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G011975.1CsGy5G011975.1mRNA