CsGy5G010860 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTTCTCAACCTTATAGATCAATTTGTACAGAAGTAATCAATGTTCTTCTTCCTCAAGATGAAACCTATATCGGTAATAACTTCATTTCCCTCTTTAGCCAACAAAAAATTTCCCTTGATGACCCTCAGCTGAAAAATTTAGCTCCAAGTCTCCACCCTCGAATTGTTGAAACTGTCTTGAATGGCTTGAGGAGTTGGAAGATTGCTCATATGTTCTTCACCTGGGCCTCAAAACAACATGAGTACAAACATAATTGTTATACTTTCACTGCCATTGCTAGACAAAATGCCCTACTACGAGCCGTTGCTATGGATGTCCTTAACTTTGGGAGTCTCTTTAAGATGTTTGGGAAGTGTGGGGTTGGTTGA ATGGTTTCTCAACCTTATAGATCAATTTGTACAGAAGTAATCAATGTTCTTCTTCCTCAAGATGAAACCTATATCGGTAATAACTTCATTTCCCTCTTTAGCCAACAAAAAATTTCCCTTGATGACCCTCAGCTGAAAAATTTAGCTCCAAGTCTCCACCCTCGAATTGTTGAAACTGTCTTGAATGGCTTGAGGAGTTGGAAGATTGCTCATATGTTCTTCACCTGGGCCTCAAAACAACATGAGTACAAACATAATTGTTATACTTTCACTGCCATTGCTAGACAAAATGCCCTACTACGAGCCGTTGCTATGGATGTCCTTAACTTTGGGAGTCTCTTTAAGATGTTTGGGAAGTGTGGGGTTGGTTGA ATGGTTTCTCAACCTTATAGATCAATTTGTACAGAAGTAATCAATGTTCTTCTTCCTCAAGATGAAACCTATATCGGTAATAACTTCATTTCCCTCTTTAGCCAACAAAAAATTTCCCTTGATGACCCTCAGCTGAAAAATTTAGCTCCAAGTCTCCACCCTCGAATTGTTGAAACTGTCTTGAATGGCTTGAGGAGTTGGAAGATTGCTCATATGTTCTTCACCTGGGCCTCAAAACAACATGAGTACAAACATAATTGTTATACTTTCACTGCCATTGCTAGACAAAATGCCCTACTACGAGCCGTTGCTATGGATGTCCTTAACTTTGGGAGTCTCTTTAAGATGTTTGGGAAGTGTGGGGTTGGTTGA MVSQPYRSICTEVINVLLPQDETYIGNNFISLFSQQKISLDDPQLKNLAPSLHPRIVETVLNGLRSWKIAHMFFTWASKQHEYKHNCYTFTAIARQNALLRAVAMDVLNFGSLFKMFGKCGVG* Homology
BLAST of CsGy5G010860 vs. ExPASy Swiss-Prot
Match: P0C8Q6 (Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g08310 PE=3 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 5.8e-19 Identity = 50/133 (37.59%), Postives = 80/133 (60.15%), Query Frame = 0
BLAST of CsGy5G010860 vs. NCBI nr
Match: KAE8648181.1 (hypothetical protein Csa_018533 [Cucumis sativus]) HSP 1 Score: 241 bits (616), Expect = 3.55e-80 Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of CsGy5G010860 vs. NCBI nr
Match: XP_011654469.1 (putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial [Cucumis sativus] >XP_011654470.1 putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial [Cucumis sativus] >XP_011654471.1 putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial [Cucumis sativus] >KAE8648179.1 hypothetical protein Csa_018469 [Cucumis sativus]) HSP 1 Score: 190 bits (483), Expect = 1.53e-53 Identity = 97/115 (84.35%), Postives = 100/115 (86.96%), Query Frame = 0
BLAST of CsGy5G010860 vs. NCBI nr
Match: XP_038894372.1 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial [Benincasa hispida]) HSP 1 Score: 172 bits (435), Expect = 7.33e-47 Identity = 87/115 (75.65%), Postives = 95/115 (82.61%), Query Frame = 0
BLAST of CsGy5G010860 vs. NCBI nr
Match: KAG6601987.1 (putative pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 155 bits (392), Expect = 3.55e-45 Identity = 77/115 (66.96%), Postives = 90/115 (78.26%), Query Frame = 0
BLAST of CsGy5G010860 vs. NCBI nr
Match: KAA0056820.1 (putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ99942.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 166 bits (419), Expect = 9.31e-45 Identity = 85/115 (73.91%), Postives = 92/115 (80.00%), Query Frame = 0
BLAST of CsGy5G010860 vs. ExPASy TrEMBL
Match: A0A0A0KL85 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G021860 PE=4 SV=1) HSP 1 Score: 255 bits (651), Expect = 6.04e-86 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of CsGy5G010860 vs. ExPASy TrEMBL
Match: A0A0A0KMI5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G021350 PE=4 SV=1) HSP 1 Score: 190 bits (483), Expect = 6.96e-54 Identity = 97/115 (84.35%), Postives = 100/115 (86.96%), Query Frame = 0
BLAST of CsGy5G010860 vs. ExPASy TrEMBL
Match: A0A5A7UP07 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00750 PE=4 SV=1) HSP 1 Score: 166 bits (419), Expect = 4.51e-45 Identity = 85/115 (73.91%), Postives = 92/115 (80.00%), Query Frame = 0
BLAST of CsGy5G010860 vs. ExPASy TrEMBL
Match: A0A6J1CLB5 (putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111012005 PE=3 SV=1) HSP 1 Score: 166 bits (419), Expect = 5.03e-45 Identity = 85/115 (73.91%), Postives = 94/115 (81.74%), Query Frame = 0
BLAST of CsGy5G010860 vs. ExPASy TrEMBL
Match: A0A1S3BTR3 (putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103493457 PE=4 SV=1) HSP 1 Score: 166 bits (419), Expect = 5.49e-45 Identity = 85/115 (73.91%), Postives = 92/115 (80.00%), Query Frame = 0
BLAST of CsGy5G010860 vs. TAIR 10
Match: AT5G08310.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 95.1 bits (235), Expect = 4.1e-20 Identity = 50/133 (37.59%), Postives = 80/133 (60.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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