CsGy5G008550 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G008550
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr5: 6509685 .. 6513225 (-)
RNA-Seq Expression	CsGy5G008550
Synteny	CsGy5G008550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAAATTTTCTTCCAAAGGATGAACAAATCTTAACTAAAATCGAAGAGGAAACATAAATCTGCGATTTCGCAAAGGCGAAATTGGGAGTTTCAATTCTCTCCAAAACAACTTTTTGTTGTCTGATGGCAAAATCGCTTCCATCGCCAGCTCGCTTTCAGCAATTCGCTAAGCTTGTCTTCTCCTCCAAAAACCCCCAATCACAACCCAAGAAGTCTCGGATCCGAGCTTCTCCTTCCGAAACTCCGATTTCCGGTTCCGTTCGAGTCATCTCCGAGCCGAATAAGAACAAGTACATGGAGGAGGAGGAGAAGAACCGGACTCCTTTGGCTGATGTGGTTTCGGATTGTGTCAAGCGGTGGTTTCAGGACACGCTCAAGGAGGCCAAAGCCGGGGATACGTCGATGCAAGTCTTGGTTGGCCAGATGTTTTGCTCCGGCTATGGAGTTCCTAAGAACACGAAGAAGGTTTGCGTTTTTTTTATTTTATTTTATCTCTACATTTCGAAATTTCGTGTTCATTTTCTTGCTGAAGTATCTGGGGAATTTGAGAGGAAATACAAAATGAATTTCGATTGGTTCTTGAAGGGTTGTGAAGTACTTCTAGGTTTTAGAGAATGTAGGTAATTTTGGGATGAGGTTCATTGGAGAATTTCATCCTGTTGGTTTGTCTTTTGAGCTTTTTCTAATTGCTAAGGTTATTATGGTTTGTTTTGTGTTGCTTAACGATGAATAAGGTTTTCTTTTGGCTTTCCTATTGAGATAGGGAAAGGCTCATTGGTTTGGTTTTGAATATTGCGCTCGAGAGAAATAAGAGTTGAGAGTCCTTAGTTGGGTGAAATTTGGTTCGCTTTGAACGTCTGTTGTGTTTGTGCCTTGAAGCACATGTTTGGGATTGGTTTTGAAATGTTTACTGTTCAAATCACTCTTAAACATGTTTTAAATTGATTAAAGGCATGCTTTAAGGGATCGGAAGGATTTTGAACCTGACATATTGATTTTGACCATTTCTGAATCACTCCAAAATATGCCCATAAAAGTCCTTTAACAATGTTTTCTTCTTAGCTAGAGTTCTTTTGTGGCATGGTTCTCTTTCCCTTTTCCACACCACTTCATGGAGTTAGTAGAATCACTTTTCAATAGGTAAACATAAACTTTTCTTGAGAGAAAAACGTGAGAGTAGTAGTACGGGATATGTTGGGAATATTAGTGGGATAGTGATAAGGGCATAGGGATAATTAGTTAGTGATGTCTTGGTAATAAGGGAGTTGAGCCCCTTAGAAGGGAGAAAAATTCCGGGTATTGTCCAGTATGCGACTTTGGGAGACACGTAATCCTCTCGAAAAGCTACTGATATTTTGGTTTCTTTTGGCATTGCAATATAGTTCTATCTTTTGTGTTTTCTGTTGTGTTCCTTATTAGGACAATCCTAACAAAAACAAACCCTGTTCTCATCATTAAGTAAATGTCTGATCTCTGAACTAAGGGACTTGCTTGGATCTATCGAGCTTCAAAATATCAGGCATCAGTTTGGAAAGCAAGCGATAGACATCCAGGTATTCAAATTCTACAAAGTTTGATTGGCAATAATCTTTCTACATTGCATTTTTACTTCTTTTGTTCTTTAGGTTATCTTGCAACCGATTCAGAATCAAGCGATAGGAGGGTGAAACGAGATAACGTCAGATGACCCTTTCACTAATCATAGTAAGTTGTGTTTTAAATTCAAACCTTTCTATTATAAGAATTGAATTCCTCATATGGTTTTAATTCACGTATGTGAAATTCAGCATAAACTTGGTTATGAAAAAGAAAAAAGGGAAACAAGTTATCATCTATCATGTTAATTTGTGTAGAAGTAAAAGTTCTTTTGTTTCTCAACTCCTCAGACAGAAAGCTTTTTCATTTATACATAAATATTTCATTGTGGATTGCTTTTATTTAAGTTCTATTGTCCATTATTACCTATGTAATCATAATGACGATTTCAGAAGGAATATAACATTTTTGGTTTATATCCATACTTGCCCTCAAATTTTCAAATTTGTTTCACTTTGGTTCCTAATACTTCTTTAAATCAATGAAATATTCAAAGATACCAAAGGTCCAAAAGGGCCATTTCATAGGGTATACAAAAGATGTTTCCAATTTGCAATAGGAAAAGAAACGGTCGTAGCCAAATTTATCTTAGCACAAAAACAACTTTTTTATCACTTGCAGATAATCATTTTAGTCGCTGAAATTTTGTCGTCTGGTTTTTAAGATAGACGAATAATTTTGAATATGTGTATTAACGTGTGTTGCAGTAGCACCTATTAGTCATGGAAGTAGATTGGAGAAAGTATTTGGTGGAGCTGTGATATTAGTAACTAGTAACAGAATAATTCAAGGGCTTCAAGGGCAACAAATGTTGTCATGCCCTGAGTCATTATATGGTGCCCGTGCCTGCTGCAGGCTTGTTTCTATAGGAAAACTATGAACAAGATATCTTAAGGAGATTGATCAGAGGGTAGTTTTTTTAATCTGACAATATGTGGAGGGAGAAAATCAAACCTTTGACTTCAAGTTGCTAGTATAAGATTTGTGTTAATTGAGTTATGCTCATACCGGCATTAATCATAAGATAGGTAAGTGTATATATTGGTGTTTCAATATTTTGTCAAGTATAAGTGTAATTTTTTGAGAGAGAAGATTTATCCATCTTTTCATCAAGTTATGGACGTAGTTAATTCCCTAATTTGTGTTACTCATTTTTGCAGCTAATAATCCTTGCACTGCCAAAGTTCACAGTCAAATGGGTTTGTGTTTTCTATCATAAGCTTTTGGTCACCCAATGTAATGTATCCTCACCATGTTAATCATATACTGTATTTGGTTGATTAAATTTAGAATGGTGAATGCATTTCCTTCCCAACCGATGGCTTTACTTTTCATGTGACGTTTTTTTGTATAGATATAACAAGCATATGATTTTTTTAAATATTATTACGAATATAACAATGTG

mRNA sequence

TTAAAATTTTCTTCCAAAGGATGAACAAATCTTAACTAAAATCGAAGAGGAAACATAAATCTGCGATTTCGCAAAGGCGAAATTGGGAGTTTCAATTCTCTCCAAAACAACTTTTTGTTGTCTGATGGCAAAATCGCTTCCATCGCCAGCTCGCTTTCAGCAATTCGCTAAGCTTGTCTTCTCCTCCAAAAACCCCCAATCACAACCCAAGAAGTCTCGGATCCGAGCTTCTCCTTCCGAAACTCCGATTTCCGGTTCCGTTCGAGTCATCTCCGAGCCGAATAAGAACAAGTACATGGAGGAGGAGGAGAAGAACCGGACTCCTTTGGCTGATGTGGTTTCGGATTGTGTCAAGCGGTGGTTTCAGGACACGCTCAAGGAGGCCAAAGCCGGGGATACGTCGATGCAAGTCTTGGTTGGCCAGATGTTTTGCTCCGGCTATGGAGTTCCTAAGAACACGAAGAAGGGACTTGCTTGGATCTATCGAGCTTCAAAATATCAGGCATCAGTTTGGAAAGCAAGCGATAGACATCCAGGTATTCAAATTCTACAAAGTTTGATTGGCAATAATCTTTCTACATTGCATTTTTACTTCTTTTGTTCTTTAGGTTATCTTGCAACCGATTCAGAATCAAGCGATAGGAGGGTGAAACGAGATAACGTCAGATGACCCTTTCACTAATCATAGTAAGTTGTGTTTTAAATTCAAACCTTTCTATTATAAGAATTGAATTCCTCATATGGTTTTAATTCACGTATGTGAAATTCAGCATAAACTTGGTTATGAAAAAGAAAAAAGGGAAACAAGTTATCATCTATCATGTTAATTTGTGTAGAAGTAAAAGTTCTTTTGTTTCTCAACTCCTCAGACAGAAAGCTTTTTCATTTATACATAAATATTTCATTGTGGATTGCTTTTATTTAAGTTCTATTGTCCATTATTACCTATGTAATCATAATGACGATTTCAGAAGGAATATAACATTTTTGGTTTATATCCATACTTGCCCTCAAATTTTCAAATTTGTTTCACTTTGGTTCCTAATACTTCTTTAAATCAATGAAATATTCAAAGATACCAAAGGTCCAAAAGGGCCATTTCATAGGGTATACAAAAGATGTTTCCAATTTGCAATAGGAAAAGAAACGGTCGTAGCCAAATTTATCTTAGCACAAAAACAACTTTTTTATCACTTGCAGATAATCATTTTAGTCGCTGAAATTTTGTCGTCTGGTTTTTAAGATAGACGAATAATTTTGAATATGTGTATTAACGTGTGTTGCAGTAGCACCTATTAGTCATGGAAGTAGATTGGAGAAAGTATTTGGTGGAGCTGTGATATTAGTAACTAGTAACAGAATAATTCAAGGGCTTCAAGGGCAACAAATGTTGTCATGCCCTGAGTCATTATATGGTGCCCGTGCCTGCTGCAGGCTTGTTTCTATAGGAAAACTATGAACAAGATATCTTAAGGAGATTGATCAGAGGGTAGTTTTTTTAATCTGACAATATGTGGAGGGAGAAAATCAAACCTTTGACTTCAAGTTGCTAGTATAAGATTTGTGTTAATTGAGTTATGCTCATACCGGCATTAATCATAAGATAGCTAATAATCCTTGCACTGCCAAAGTTCACAGTCAAATGGGTTTGTGTTTTCTATCATAAGCTTTTGGTCACCCAATGTAATGTATCCTCACCATGTTAATCATATACTGTATTTGGTTGATTAAATTTAGAATGGTGAATGCATTTCCTTCCCAACCGATGGCTTTACTTTTCATGTGACGTTTTTTTGTATAGATATAACAAGCATATGATTTTTTTAAATATTATTACGAATATAACAATGTG

Coding sequence (CDS)

ATGGCAAAATCGCTTCCATCGCCAGCTCGCTTTCAGCAATTCGCTAAGCTTGTCTTCTCCTCCAAAAACCCCCAATCACAACCCAAGAAGTCTCGGATCCGAGCTTCTCCTTCCGAAACTCCGATTTCCGGTTCCGTTCGAGTCATCTCCGAGCCGAATAAGAACAAGTACATGGAGGAGGAGGAGAAGAACCGGACTCCTTTGGCTGATGTGGTTTCGGATTGTGTCAAGCGGTGGTTTCAGGACACGCTCAAGGAGGCCAAAGCCGGGGATACGTCGATGCAAGTCTTGGTTGGCCAGATGTTTTGCTCCGGCTATGGAGTTCCTAAGAACACGAAGAAGGGACTTGCTTGGATCTATCGAGCTTCAAAATATCAGGCATCAGTTTGGAAAGCAAGCGATAGACATCCAGGTATTCAAATTCTACAAAGTTTGATTGGCAATAATCTTTCTACATTGCATTTTTACTTCTTTTGTTCTTTAGGTTATCTTGCAACCGATTCAGAATCAAGCGATAGGAGGGTGAAACGAGATAACGTCAGATGA

Protein sequence

MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIYRASKYQASVWKASDRHPGIQILQSLIGNNLSTLHFYFFCSLGYLATDSESSDRRVKRDNVR*

Homology

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BLAST of CsGy5G008550 vs. NCBI nr
Match: XP_004146455.1 (uncharacterized protein LOC101213931 isoform X1 [Cucumis sativus])

HSP 1 Score: 364 bits (935), Expect = 4.79e-127
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE 60
           MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE
Sbjct: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE 60

Query: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120
           EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY
Sbjct: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120

Query: 121 RASKYQASVWKASDRHPGIQILQSLIGNNLSTLHFYFFCSLGYLATDSESSDRRVKRDNV 180
           RASKYQASVWKASDRHPGIQILQSLIGNNLSTLHFYFFCSLGYLATDSESSDRRVKRDNV
Sbjct: 121 RASKYQASVWKASDRHPGIQILQSLIGNNLSTLHFYFFCSLGYLATDSESSDRRVKRDNV 180

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BLAST of CsGy5G008550 vs. NCBI nr
Match: XP_004146456.1 (uncharacterized protein LOC101213931 isoform X2 [Cucumis sativus] >XP_031741805.1 uncharacterized protein LOC101213931 isoform X2 [Cucumis sativus] >KGN50710.1 hypothetical protein Csa_005851 [Cucumis sativus])

HSP 1 Score: 303 bits (775), Expect = 5.16e-103
Identity = 157/181 (86.74%), Postives = 157/181 (86.74%), Query Frame = 0


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE 60
           MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE
Sbjct: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE 60

Query: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120
           EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY
Sbjct: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120

Query: 121 RASKYQASVWKASDRHPGIQILQSLIGNNLSTLHFYFFCSLGYLATDSESSDRRVKRDNV 180
           RASKYQASVWKASDRHPG                        YLATDSESSDRRVKRDNV
Sbjct: 121 RASKYQASVWKASDRHPG------------------------YLATDSESSDRRVKRDNV 157

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BLAST of CsGy5G008550 vs. NCBI nr
Match: XP_008456900.1 (PREDICTED: uncharacterized protein LOC103496713 [Cucumis melo] >XP_008456901.1 PREDICTED: uncharacterized protein LOC103496713 [Cucumis melo])

HSP 1 Score: 283 bits (723), Expect = 4.35e-95
Identity = 146/181 (80.66%), Postives = 152/181 (83.98%), Query Frame = 0


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE 60
           MAKSLPSP RFQQFAKLVFSSKNPQS PKKSRIRASPSETPISGSVRVI EPNKNKYMEE
Sbjct: 1   MAKSLPSPTRFQQFAKLVFSSKNPQSPPKKSRIRASPSETPISGSVRVILEPNKNKYMEE 60

Query: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120
           +EKNRTPL+DVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY
Sbjct: 61  KEKNRTPLSDVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120

Query: 121 RASKYQASVWKASDRHPGIQILQSLIGNNLSTLHFYFFCSLGYLATDSESSDRRVKRDNV 180
           RASKYQ SVWKAS+RHPG                        YLATDSESS+RRVKR++ 
Sbjct: 121 RASKYQPSVWKASERHPG------------------------YLATDSESSNRRVKRNDF 157

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BLAST of CsGy5G008550 vs. NCBI nr
Match: XP_023552657.1 (uncharacterized protein LOC111810237 [Cucurbita pepo subsp. pepo] >XP_023552666.1 uncharacterized protein LOC111810237 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 223 bits (569), Expect = 1.61e-71
Identity = 124/183 (67.76%), Postives = 134/183 (73.22%), Query Frame = 0


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQP--KKSRIRASPSETPISGSVRVISEPNKNKYM 60
           MAKSLP  +R QQFAK+V SSK PQS    +K +IR SP ETPIS SVRVISEP + K  
Sbjct: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPTARQKPKIRVSPPETPISDSVRVISEPAQPKK- 60

Query: 61  EEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120
             E KNR PLADVVSDC KRWFQDTLKEA AGDT+MQVLVGQMFCSGYGVPK+T+KGLAW
Sbjct: 61  NMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLAW 120

Query: 121 IYRASKYQASVWKASDRHPGIQILQSLIGNNLSTLHFYFFCSLGYLATDSESSDRRVKRD 180
           I RASKYQASVWKASDRHP                         YLATDSESSDRRVKRD
Sbjct: 121 INRASKYQASVWKASDRHPA------------------------YLATDSESSDRRVKRD 158

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BLAST of CsGy5G008550 vs. NCBI nr
Match: XP_038892993.1 (uncharacterized protein LOC120081889 [Benincasa hispida])

HSP 1 Score: 222 bits (566), Expect = 4.04e-71
Identity = 126/187 (67.38%), Postives = 136/187 (72.73%), Query Frame = 0


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPK--KSRIRASPSETPISGSVRVISEPNKNKYM 60
           MAKSLPSP R  QFAK+V +SK PQS     KSRIR SP ETPISG+VRVISE  KN   
Sbjct: 1   MAKSLPSPTRLHQFAKVVVASKKPQSATPNPKSRIRVSPPETPISGTVRVISELKKNNNN 60

Query: 61  EEEEK----NRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKK 120
            EEEK    +RTPLADVVSDCVKRWFQDTLKEA+AGDTSMQVLVGQMFCSGYGVPK+T+K
Sbjct: 61  MEEEKKEEAHRTPLADVVSDCVKRWFQDTLKEARAGDTSMQVLVGQMFCSGYGVPKDTQK 120

Query: 121 GLAWIYRASKYQASVWKASDRHPGIQILQSLIGNNLSTLHFYFFCSLGYLATDSESSDRR 180
           G+AWI RASK QA  WK SDRHPG                        YLATDSESSDRR
Sbjct: 121 GIAWINRASKNQA--WKVSDRHPG------------------------YLATDSESSDRR 161

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BLAST of CsGy5G008550 vs. ExPASy TrEMBL
Match: A0A0A0KM25 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G218760 PE=4 SV=1)

HSP 1 Score: 303 bits (775), Expect = 2.50e-103
Identity = 157/181 (86.74%), Postives = 157/181 (86.74%), Query Frame = 0


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE 60
           MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE
Sbjct: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE 60

Query: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120
           EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY
Sbjct: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120

Query: 121 RASKYQASVWKASDRHPGIQILQSLIGNNLSTLHFYFFCSLGYLATDSESSDRRVKRDNV 180
           RASKYQASVWKASDRHPG                        YLATDSESSDRRVKRDNV
Sbjct: 121 RASKYQASVWKASDRHPG------------------------YLATDSESSDRRVKRDNV 157

[Close]

BLAST of CsGy5G008550 vs. ExPASy TrEMBL
Match: A0A1S3C493 (uncharacterized protein LOC103496713 OS=Cucumis melo OX=3656 GN=LOC103496713 PE=4 SV=1)

HSP 1 Score: 283 bits (723), Expect = 2.11e-95
Identity = 146/181 (80.66%), Postives = 152/181 (83.98%), Query Frame = 0


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE 60
           MAKSLPSP RFQQFAKLVFSSKNPQS PKKSRIRASPSETPISGSVRVI EPNKNKYMEE
Sbjct: 1   MAKSLPSPTRFQQFAKLVFSSKNPQSPPKKSRIRASPSETPISGSVRVILEPNKNKYMEE 60

Query: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120
           +EKNRTPL+DVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY
Sbjct: 61  KEKNRTPLSDVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120

Query: 121 RASKYQASVWKASDRHPGIQILQSLIGNNLSTLHFYFFCSLGYLATDSESSDRRVKRDNV 180
           RASKYQ SVWKAS+RHPG                        YLATDSESS+RRVKR++ 
Sbjct: 121 RASKYQPSVWKASERHPG------------------------YLATDSESSNRRVKRNDF 157

[Close]

BLAST of CsGy5G008550 vs. ExPASy TrEMBL
Match: A0A6J1FNN7 (uncharacterized protein LOC111447103 OS=Cucurbita moschata OX=3662 GN=LOC111447103 PE=4 SV=1)

HSP 1 Score: 222 bits (565), Expect = 3.17e-71
Identity = 123/183 (67.21%), Postives = 133/183 (72.68%), Query Frame = 0


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQP--KKSRIRASPSETPISGSVRVISEPNKNKYM 60
           MAKS P  +R QQFAK+V SSK PQS    +K +IR SP ETPIS SVRVISEP + K  
Sbjct: 1   MAKSFPLASRLQQFAKVVVSSKKPQSPTARQKPKIRVSPPETPISDSVRVISEPAQPKK- 60

Query: 61  EEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120
             E KNR PLADVVSDC KRWFQDTLKEA AGDT+MQVLVGQMFCSGYGVPK+T+KGLAW
Sbjct: 61  NMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLAW 120

Query: 121 IYRASKYQASVWKASDRHPGIQILQSLIGNNLSTLHFYFFCSLGYLATDSESSDRRVKRD 180
           I RASKYQASVWKASDRHP                         YLATDSESSDRRVKRD
Sbjct: 121 INRASKYQASVWKASDRHPA------------------------YLATDSESSDRRVKRD 158

[Close]

BLAST of CsGy5G008550 vs. ExPASy TrEMBL
Match: A0A5D3DQA2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00560 PE=4 SV=1)

HSP 1 Score: 218 bits (554), Expect = 1.01e-69
Identity = 110/116 (94.83%), Postives = 112/116 (96.55%), Query Frame = 0


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE 60
           MAKSLPSP RFQQFAKLVFSSKNPQS PKKSRIRASPSETPISGSVRVI EPNKNKYMEE
Sbjct: 1   MAKSLPSPTRFQQFAKLVFSSKNPQSPPKKSRIRASPSETPISGSVRVILEPNKNKYMEE 60

Query: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGL 116
           +EKNRTPL+DVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKK L
Sbjct: 61  KEKNRTPLSDVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKVL 116

[Close]

BLAST of CsGy5G008550 vs. ExPASy TrEMBL
Match: A0A6J1K2L5 (uncharacterized protein LOC111491826 OS=Cucurbita maxima OX=3661 GN=LOC111491826 PE=4 SV=1)

HSP 1 Score: 212 bits (540), Expect = 1.36e-67
Identity = 121/178 (67.98%), Postives = 129/178 (72.47%), Query Frame = 0


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQP--KKSRIRASPSETPISGSVRVISEPNKNKYM 60
           MAKSLP  +R QQFAK+V SSK PQS    +K +IR SP ETPIS SVRVISEP + K  
Sbjct: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPTPRQKPKIRVSPPETPISDSVRVISEPAQPKK- 60

Query: 61  EEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120
             E KNR PLADVVSDC KRWFQDTLKEA AGDT+MQVLVGQMFCSGYGVPK+T+KGLAW
Sbjct: 61  NMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLAW 120

Query: 121 IYRASKYQASVWKASDRHPGIQILQSLIGNNLSTLHFYFFCSLGYLATDSESSDRRVK 176
           I RASKYQASV KASDRHPG                        YLATDSESSDRRVK
Sbjct: 121 ISRASKYQASVRKASDRHPG------------------------YLATDSESSDRRVK 153

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BLAST of CsGy5G008550 vs. TAIR 10
Match: AT5G05360.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G38450.1); Has 84 Blast hits to 84 proteins in 24 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 117.1 bits (292), Expect = 1.5e-26
Identity = 74/184 (40.22%), Postives = 98/184 (53.26%), Query Frame = 0


Query: 7   SPARFQQFAKLVFSSKN------PQSQPK-----KSRIRASPSETPISGSVRV-----IS 66
           S  RF +FA +  SS+N      P   P+     K   R + S    S  V++      S
Sbjct: 4   SMVRFAEFA-IRLSSENPTRPHRPSPSPRNKVFVKKTTRDTTSHLDYSNLVKLEKAGSHS 63

Query: 67  EPNKNKYMEEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPK 126
             N       +  NR PLA VV DCV+RWFQDTLKEAK+GD  MQVLVGQM+CSGYG+PK
Sbjct: 64  GSNPAPASGSDPINRVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPK 123

Query: 127 NTKKGLAWIYRASKYQASVWKASDRHPGIQILQSLIGNNLSTLHFYFFCSLGYLATDSES 175
           +  KG AWI +AS+ ++S W+ SD+ P                        GY A+DS+S
Sbjct: 124 DENKGRAWINKASRTRSSAWQVSDKPP------------------------GYNASDSDS 162

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BLAST of CsGy5G008550 vs. TAIR 10
Match: AT5G05360.2 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G38450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 116.3 bits (290), Expect = 2.5e-26
Identity = 69/151 (45.70%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 7   SPARFQQFAKLVFSSKN------PQSQPK-----KSRIRASPSETPISGSVRV-----IS 66
           S  RF +FA +  SS+N      P   P+     K   R + S    S  V++      S
Sbjct: 4   SMVRFAEFA-IRLSSENPTRPHRPSPSPRNKVFVKKTTRDTTSHLDYSNLVKLEKAGSHS 63

Query: 67  EPNKNKYMEEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPK 126
             N       +  NR PLA VV DCV+RWFQDTLKEAK+GD  MQVLVGQM+CSGYG+PK
Sbjct: 64  GSNPAPASGSDPINRVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPK 123

Query: 127 NTKKGLAWIYRASKYQASVWKASDRHPGIQI 142
           +  KG AWI +AS+ ++S W+ SD+ PG  I
Sbjct: 124 DENKGRAWINKASRTRSSAWQVSDKPPGNNI 153

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BLAST of CsGy5G008550 vs. TAIR 10
Match: AT2G38450.1 (CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G05360.1); Has 88 Blast hits to 88 proteins in 25 species: Archae - 0; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 109.8 bits (273), Expect = 2.4e-24
Identity = 52/106 (49.06%), Postives = 71/106 (66.98%), Query Frame = 0


Query: 33  IRASPSETPISGSVRVISEPNKNKYMEEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDT 92
           I++S    PIS       + +      E  +   PL+ VVSDC KRWF+DTL+EAKAG+ 
Sbjct: 22  IKSSKPIRPISSMDSSDKDSSSTTTTSETTRRFVPLSSVVSDCAKRWFKDTLEEAKAGNI 81

Query: 93  SMQVLVGQMFCSGYGVPKNTKKGLAWIYRASKYQASVWKASDRHPG 139
           +MQVL+GQM+ SGYGVPK+ +KG  WI +AS+ ++SVWK  D+ PG
Sbjct: 82  TMQVLLGQMYYSGYGVPKDARKGRLWITKASRVRSSVWKVIDKRPG 127

The following BLAST results are available for this feature:

BLAST of CsGy5G008550 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy5G008550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146455.1	4.79e-127	100.00	uncharacterized protein LOC101213931 isoform X1 [Cucumis sativus]	[more]
XP_004146456.1	5.16e-103	86.74	uncharacterized protein LOC101213931 isoform X2 [Cucumis sativus] >XP_031741805....	[more]
XP_008456900.1	4.35e-95	80.66	PREDICTED: uncharacterized protein LOC103496713 [Cucumis melo] >XP_008456901.1 P...	[more]
XP_023552657.1	1.61e-71	67.76	uncharacterized protein LOC111810237 [Cucurbita pepo subsp. pepo] >XP_023552666....	[more]
XP_038892993.1	4.04e-71	67.38	uncharacterized protein LOC120081889 [Benincasa hispida]	[more]

BLAST of CsGy5G008550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KM25	2.50e-103	86.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G218760 PE=4 SV=1	[more]
A0A1S3C493	2.11e-95	80.66	uncharacterized protein LOC103496713 OS=Cucumis melo OX=3656 GN=LOC103496713 PE=...	[more]
A0A6J1FNN7	3.17e-71	67.21	uncharacterized protein LOC111447103 OS=Cucurbita moschata OX=3662 GN=LOC1114471...	[more]
A0A5D3DQA2	1.01e-69	94.83	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1K2L5	1.36e-67	67.98	uncharacterized protein LOC111491826 OS=Cucurbita maxima OX=3661 GN=LOC111491826...	[more]

BLAST of CsGy5G008550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05360.1	1.5e-26	40.22	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]
AT5G05360.2	2.5e-26	45.70	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]
AT2G38450.1	2.4e-24	49.06	CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597); BEST Arabidopsis tha...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 50..140 e-value: 4.7E-5 score: 25.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..45
None	No IPR available	PANTHER	PTHR36792	EXPRESSED PROTEIN	coord: 1..144
None	No IPR available	PANTHER	PTHR36792:SF6	TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED	coord: 1..144
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 84..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G008550.2	CsGy5G008550.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding