CsGy5G006845 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G006845
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr5: 4641305 .. 4641849 (+)
RNA-Seq ExpressionCsGy5G006845
SyntenyCsGy5G006845
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACTGAACCATTCGATCCTCTGTACATGTGTACGGTTGGATTACGAGATCGTAAACAGAAATCGTAAAACCGCGTTGTAGAGGATCTTTGGCTATAGTAAAAAAATACCAAAGCTCAGTTTCTGTCGCTATCCAGTAGTCCCTCCCAAGTCCCTTTCTCTTTCTTCTCATATCACCACCGAGAGAAACATCGCTTGTTCCAAACCCACCGGCAAATTTCTCCGGCGAAGGTCAGTTCATTGACAATCTCTCTTACTTTTTTTAATTTCTAAGGTTTCCTCTCTCTCATTGTTCCTTTCTTTGATTTTGATTCGTATTCAATTTCTTGTGCATTTTTTTTTTTTTAATTTGTGTGCTCGTGTGTTTCTGTCTGTTTGTTTTCGGAATTTAGTTTGATCGTGATTACCTCTGATCGGGATTCGATTTCTGCATACGCTATGAGTTTTGATTTTTGGTTGTTTCTGTGCAGATTGATTTTGGAAATCTTCTTTCAGGTTTGCGATTTCGGTGGTTCTTTCTTATGTTTTTCATCGTTAACTTGA

mRNA sequence

ATGAAACTGAACCATTCGATCCTCTGTACATGTGTACGGTTGGATTACGAGATCGTAAACAGAAATCTAGTCCCTCCCAAGTCCCTTTCTCTTTCTTCTCATATCACCACCGAGAGAAACATCGCTTGTTCCAAACCCACCGGCAAATTTCTCCGGCGAAGATTGATTTTGGAAATCTTCTTTCAGGTTTGCGATTTCGGTGGTTCTTTCTTATGTTTTTCATCGTTAACTTGA

Coding sequence (CDS)

ATGAAACTGAACCATTCGATCCTCTGTACATGTGTACGGTTGGATTACGAGATCGTAAACAGAAATCTAGTCCCTCCCAAGTCCCTTTCTCTTTCTTCTCATATCACCACCGAGAGAAACATCGCTTGTTCCAAACCCACCGGCAAATTTCTCCGGCGAAGATTGATTTTGGAAATCTTCTTTCAGGTTTGCGATTTCGGTGGTTCTTTCTTATGTTTTTCATCGTTAACTTGA

Protein sequence

MKLNHSILCTCVRLDYEIVNRNLVPPKSLSLSSHITTERNIACSKPTGKFLRRRLILEIFFQVCDFGGSFLCFSSLT*
Homology
[Close]
BLAST of CsGy5G006845 vs. NCBI nr
Match: KGN50534.1 (hypothetical protein Csa_000622 [Cucumis sativus])

HSP 1 Score: 161 bits (408), Expect = 5.18e-50
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MKLNHSILCTCVRLDYEIVNRNLVPPKSLSLSSHITTERNIACSKPTGKFLRRRLILEIF 60
          MKLNHSILCTCVRLDYEIVNRNLVPPKSLSLSSHITTERNIACSKPTGKFLRRRLILEIF
Sbjct: 1  MKLNHSILCTCVRLDYEIVNRNLVPPKSLSLSSHITTERNIACSKPTGKFLRRRLILEIF 60

Query: 61 FQVCDFGGSFLCFSSLT 77
          FQVCDFGGSFLCFSSLT
Sbjct: 61 FQVCDFGGSFLCFSSLT 77

[Close]
BLAST of CsGy5G006845 vs. ExPASy TrEMBL
Match: A0A0A0KNV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G181170 PE=4 SV=1)

HSP 1 Score: 161 bits (408), Expect = 2.51e-50
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MKLNHSILCTCVRLDYEIVNRNLVPPKSLSLSSHITTERNIACSKPTGKFLRRRLILEIF 60
          MKLNHSILCTCVRLDYEIVNRNLVPPKSLSLSSHITTERNIACSKPTGKFLRRRLILEIF
Sbjct: 1  MKLNHSILCTCVRLDYEIVNRNLVPPKSLSLSSHITTERNIACSKPTGKFLRRRLILEIF 60

Query: 61 FQVCDFGGSFLCFSSLT 77
          FQVCDFGGSFLCFSSLT
Sbjct: 61 FQVCDFGGSFLCFSSLT 77

The following BLAST results are available for this feature:
BLAST of CsGy5G006845 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy5G006845 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50534.15.18e-50100.00hypothetical protein Csa_000622 [Cucumis sativus][more]
BLAST of CsGy5G006845 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNV02.51e-50100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G181170 PE=4 SV=1[more]
BLAST of CsGy5G006845 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G006845.1CsGy5G006845.1mRNA