CsGy5G006790 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G006790
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	RNA-binding protein CP31B, chloroplastic
Location	Gy14Chr5: 4595316 .. 4598631 (+)
RNA-Seq Expression	CsGy5G006790
Synteny	CsGy5G006790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAAAGGGATAAACCCCGGCCGCTGCCAATAGGTTTTAGTAGGAAACTTAGGAACCCTCCAAGTTCGAATTTCAGGCGTTTATGAATCCACCATTGTGAAGATGGTTTTATCAAACAAAAAGTTGAAGCAGAAATTGAGAGAGAAGCTAGCCGAGTCGTTGATTTCATCAGTCGCCGGAAGGGATACCAACTTTGGTGTTTCCGGTGAACGGGATACAGAATCTCCGCGAAAATCCCTCAAAGAGCTATTAGGCACCGCTAGTGGCAATGGGCCCAGATTGTCCAAGCGAGAGAAACGAAGAGAATCGCTCGTTTTGACGGGTTCGGATGGAAATAAGAAGGAGAAGAAGGAAGATGAGAATCAGGGATTGGGAGAGAAGAAGAGGAAAAGAAACGAAGGGGTGAAGGAGAAGAATGCGGTTGATGGGTTGGAAGAGGATAATGAGAAGGCCAAAAAGTTGAAGAATAAAAAGAAGCAGCAGCAGAAGAAGAAGATGAAGAAGAAGAAGAGTAATAAGAAGGAAAACAATGGCGAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGCAGGGAGATGTAAGTGGGAATGACGTGAAAGGGCAGGTTGAAGAAACTCATTATAATATAGGCAGGTAGTTCATTTAAGCTATTGCCTCAGCTGTTATATATCTCAGTAGCTTCACATTTCCTTTTGAACTCTTAGATTGAATGACATTGATGAGTTATGATTAATTGCTTATGAAAATTTCTCTGAGGGACTATGCTTCTGATTGTTTTAGTCTGCTAGTGTTAGACATTGATCTGGAAATGATTTGCCTTTGATGATTTACTGTCAATGCTCGAGGAGGGAGAAATTGCATTTCGAATATGAATTGCTGCTTTCTTAGGGGAATGGCTTGAGTTTGATTAAGCGTTAAAACTCTTTCTCGTGTTAGTTCCCTTGTAGATATTGTATGCACAATAGTGTCTATGGATCTGATACTCTAATAGTGTTTATTATATTGATCTGAGGAATTTTTAATGGTATTGCCCTAGTCCAAGCTGTGTCATCTAGATTGGTAGATGCTTTAGCGCTGCCCTTCTCCTTTTGATTGATTAGAATGTGAAAGTGGACTTTTCTTTTTGCTGATATTTATTAGTGCTCTTCAATATTCTACAGTGAATTTGATGAAAATTTGGCTACAAAAGTGTATGTTGGAGGCATTCCATATTATTCAACCGAGGACGATATTTGTAGCTTTTTTGAAAGCTGTGGCACTATTACTGAAATTGATTGTATGAAGTTTCCAGAGAGTGGCAAGTTCAGAGGCATTGCTATATTGAGTTTCAAGGTATGGTAATCTGATTAATATGTAATTTCATTCCTCTTAGTAGGGAAGATCAAACAACTTTTGAATGGTTCATGATTGGTGATTTGTGCCAGATCTTAGTCTTACTGAGTGTGAGTTGGTGCAACTGTTGGCACTCAAATTGCTTGCAAGTGTGCAACTTCCGTTTTAAAGTTAATTGAGGTTAGAAATGAGATTTAAAAGGCATTATGACACTAGGATTTCCAAAGTTTAGCCAAATATTGTGTCATATATATAACATTACTAAAGAATATTCACTTGAACATACAATTAGCTTTCTTATTCTAAAAAACATATAGTATGTCATTTGAATTGATTTCTGTGTAATTAGCATGTCAGAGTCAGACTGTCAAGTTCTAATTGAGAGCTTGGGACTTGTACTTCGCTTTGTCCTGAACTGATAGTGGCCAGATCTCCTCCCCCTTTTTGCCTAGTGTACATCTACTGGCTAATATCTACGATTGAATTAACTGAGCAATTATAAGGACAGAGACCGGCTCTTAAGTCAGCTGTCTTAGTAACCCATCGGCAATCTCTTTTGTAACCTCCTATAGTTGTTATAGGCTTTCTGGGGTTTTCCTTGACTTTGTTTATCAGTGAAATGTTTATTTATCATAAAATCAATTTTGAATTTCCGGAGGCCAGATTCCTTTGGTTTTATTGCTACCTTACCACTGTTTCCCTTTCACAGACAGAAGCTGCAGCGAAACGAGCACTAGCCTGTGATGGAGCCGACATGTGAGAATCTGAACAATTTGATCTCTTGTCGTCATTATACTTTCTTACTTAATTCCACCACCTTATTACAAATTATTCTTATATAGGGGGGGACTCTTCCTTAAAGTACAGCCCTACAAAGGAACACGAAAGAATAGAGCAGCTGATTTCTCTCCAGGACTTGTGGAAGGCTACAACAGAATCTATATAGGGAATCTTTCGTGGGATGTAACTGAGGATGATCTAAAGAAACTATTTGTAAACTGCAAGATTGCTTCGATACGTTTTGGCATGGACAAGGAAACAGGGGAGTTTCGTGGCTACGCCCACGTGGATTTCTCTGACGGTATCTCATTAAAAACGGCTTTGAAGTTAGACCAGAAAATAATTCACGGTAGACCTGTCAAGATTAGATGCGCAGTTCCAAAGAAAGGGACAGAAAACGGCGGAGGAGGAGCAGTAGCAGGAGCAGAAACGCATCCAGAAATGAATCCAGAGCCTATACCGGAAACGAAGGAAGCTGCTGTAAGTGTAGTAAGCGCTGTTAGTGGTAAGATAAGAAGAAGAACATGCTACGAATGTGGTGAAAAAGGCCATCTTTCTTCCAACTGCCCAAATAAGCAGCTTGCGGATTCAGTTACAAGTTGAGGTACAATGAATGCCTTCTCTTTGTTTCTTGTTGGCAGCAAAATTGAACTGTTGAGAATTTTCTTTTGCACTGTATGCTAATTGTAATCTGATGTTTTGAATTTCACTTATAGAAAGGTTAATATAAATTTAATCTGGCTAGGAGAAAAATTATTTTTACATTGAATTAGTTCCATCTCATATTGATTTTTTCTCTCATTTTAATTTACATGTGGACTATGAGTTCAGAATATAATGTGTTTCAAGAATTTGTTTCTTCATCCGAAACTTGGCCTAGGCTGCAAAGGGTATGTTTGAAATGACCTTCTGTGTTTTTAACTTTTAAGTGAAAAGAAAACAATATTCTTAGATAACATAGAAAGTATATTCAAATTGACTGTAATATGCTTCTTGAAACATAGGTTAATTGTTCCCATCTATGTCTTAGCTTATGCTTTTCTTGAAGTAGAGTTTATATTATGTCGTTGGATTAAATTTACATACTTTAAACTTGTGTTATTAACGTGAACAATTGAAATATAAATATGAACATTGCAACAACTGAGGAACAGCCGTGCCATCCAAAGTTGATACTTCATTATCTCATCTCGAAC

mRNA sequence

CTAAAAGGGATAAACCCCGGCCGCTGCCAATAGGTTTTAGTAGGAAACTTAGGAACCCTCCAAGTTCGAATTTCAGGCGTTTATGAATCCACCATTGTGAAGATGGTTTTATCAAACAAAAAGTTGAAGCAGAAATTGAGAGAGAAGCTAGCCGAGTCGTTGATTTCATCAGTCGCCGGAAGGGATACCAACTTTGGTGTTTCCGGTGAACGGGATACAGAATCTCCGCGAAAATCCCTCAAAGAGCTATTAGGCACCGCTAGTGGCAATGGGCCCAGATTGTCCAAGCGAGAGAAACGAAGAGAATCGCTCGTTTTGACGGGTTCGGATGGAAATAAGAAGGAGAAGAAGGAAGATGAGAATCAGGGATTGGGAGAGAAGAAGAGGAAAAGAAACGAAGGGGTGAAGGAGAAGAATGCGGTTGATGGGTTGGAAGAGGATAATGAGAAGGCCAAAAAGTTGAAGAATAAAAAGAAGCAGCAGCAGAAGAAGAAGATGAAGAAGAAGAAGAGTAATAAGAAGGAAAACAATGGCGAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGCAGGGAGATGTAAGTGGGAATGACGTGAAAGGGCAGGTTGAAGAAACTCATTATAATATAGGCAGTGAATTTGATGAAAATTTGGCTACAAAAGTGTATGTTGGAGGCATTCCATATTATTCAACCGAGGACGATATTTGTAGCTTTTTTGAAAGCTGTGGCACTATTACTGAAATTGATTGTATGAAGTTTCCAGAGAGTGGCAAGTTCAGAGGCATTGCTATATTGAGTTTCAAGACAGAAGCTGCAGCGAAACGAGCACTAGCCTGTGATGGAGCCGACATGGGGGGACTCTTCCTTAAAGTACAGCCCTACAAAGGAACACGAAAGAATAGAGCAGCTGATTTCTCTCCAGGACTTGTGGAAGGCTACAACAGAATCTATATAGGGAATCTTTCGTGGGATGTAACTGAGGATGATCTAAAGAAACTATTTGTAAACTGCAAGATTGCTTCGATACGTTTTGGCATGGACAAGGAAACAGGGGAGTTTCGTGGCTACGCCCACGTGGATTTCTCTGACGGTATCTCATTAAAAACGGCTTTGAAGTTAGACCAGAAAATAATTCACGGTAGACCTGTCAAGATTAGATGCGCAGTTCCAAAGAAAGGGACAGAAAACGGCGGAGGAGGAGCAGTAGCAGGAGCAGAAACGCATCCAGAAATGAATCCAGAGCCTATACCGGAAACGAAGGAAGCTGCTGTAAGTGTAGTAAGCGCTGTTAGTGGTAAGATAAGAAGAAGAACATGCTACGAATGTGGTGAAAAAGGCCATCTTTCTTCCAACTGCCCAAATAAGCAGCTTGCGGATTCAGTTACAAGTTGAGGTACAATGAATGCCTTCTCTTTGTTTCTTGTTGGCAGCAAAATTGAACTGTTGAGAATTTTCTTTTGCACTGTATGCTAATTGTAATCTGATGTTTTGAATTTCACTTATAGAAAGGTTAATATAAATTTAATCTGGCTAGGAGAAAAATTATTTTTACATTGAATTAGTTCCATCTCATATTGATTTTTTCTCTCATTTTAATTTACATGTGGACTATGAGTTCAGAATATAATGTGTTTCAAGAATTTGTTTCTTCATCCGAAACTTGGCCTAGGCTGCAAAGGGTATGTTTGAAATGACCTTCTGTGTTTTTAACTTTTAAGTGAAAAGAAAACAATATTCTTAGATAACATAGAAAGTATATTCAAATTGACTGTAATATGCTTCTTGAAACATAGGTTAATTGTTCCCATCTATGTCTTAGCTTATGCTTTTCTTGAAGTAGAGTTTATATTATGTCGTTGGATTAAATTTACATACTTTAAACTTGTGTTATTAACGTGAACAATTGAAATATAAATATGAACATTGCAACAACTGAGGAACAGCCGTGCCATCCAAAGTTGATACTTCATTATCTCATCTCGAAC

Coding sequence (CDS)

ATGGTTTTATCAAACAAAAAGTTGAAGCAGAAATTGAGAGAGAAGCTAGCCGAGTCGTTGATTTCATCAGTCGCCGGAAGGGATACCAACTTTGGTGTTTCCGGTGAACGGGATACAGAATCTCCGCGAAAATCCCTCAAAGAGCTATTAGGCACCGCTAGTGGCAATGGGCCCAGATTGTCCAAGCGAGAGAAACGAAGAGAATCGCTCGTTTTGACGGGTTCGGATGGAAATAAGAAGGAGAAGAAGGAAGATGAGAATCAGGGATTGGGAGAGAAGAAGAGGAAAAGAAACGAAGGGGTGAAGGAGAAGAATGCGGTTGATGGGTTGGAAGAGGATAATGAGAAGGCCAAAAAGTTGAAGAATAAAAAGAAGCAGCAGCAGAAGAAGAAGATGAAGAAGAAGAAGAGTAATAAGAAGGAAAACAATGGCGAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGCAGGGAGATGTAAGTGGGAATGACGTGAAAGGGCAGGTTGAAGAAACTCATTATAATATAGGCAGTGAATTTGATGAAAATTTGGCTACAAAAGTGTATGTTGGAGGCATTCCATATTATTCAACCGAGGACGATATTTGTAGCTTTTTTGAAAGCTGTGGCACTATTACTGAAATTGATTGTATGAAGTTTCCAGAGAGTGGCAAGTTCAGAGGCATTGCTATATTGAGTTTCAAGACAGAAGCTGCAGCGAAACGAGCACTAGCCTGTGATGGAGCCGACATGGGGGGACTCTTCCTTAAAGTACAGCCCTACAAAGGAACACGAAAGAATAGAGCAGCTGATTTCTCTCCAGGACTTGTGGAAGGCTACAACAGAATCTATATAGGGAATCTTTCGTGGGATGTAACTGAGGATGATCTAAAGAAACTATTTGTAAACTGCAAGATTGCTTCGATACGTTTTGGCATGGACAAGGAAACAGGGGAGTTTCGTGGCTACGCCCACGTGGATTTCTCTGACGGTATCTCATTAAAAACGGCTTTGAAGTTAGACCAGAAAATAATTCACGGTAGACCTGTCAAGATTAGATGCGCAGTTCCAAAGAAAGGGACAGAAAACGGCGGAGGAGGAGCAGTAGCAGGAGCAGAAACGCATCCAGAAATGAATCCAGAGCCTATACCGGAAACGAAGGAAGCTGCTGTAAGTGTAGTAAGCGCTGTTAGTGGTAAGATAAGAAGAAGAACATGCTACGAATGTGGTGAAAAAGGCCATCTTTCTTCCAACTGCCCAAATAAGCAGCTTGCGGATTCAGTTACAAGTTGA

Protein sequence

MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRLSKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVDGLEEDNEKAKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNIGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKKGTENGGGGAVAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSVTS*

Homology

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BLAST of CsGy5G006790 vs. ExPASy Swiss-Prot
Match: Q9M3B8 (Phragmoplastin interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=PHIP1 PE=1 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 3.4e-74
Identity = 202/453 (44.59%), Postives = 261/453 (57.62%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQ++R+ LAESL  SV+            +T    +SLK LL ++S + PRL
Sbjct: 1   MVLSNKKLKQRIRQDLAESLSVSVS------------ETNPQSQSLKLLLDSSS-HKPRL 60

Query: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGE-------KKRKRNEGVKEKNAVDGLEED 120
           SKREKRR        D   +E  E  N G  E       KKRKR++ V+    VD LE D
Sbjct: 61  SKREKRRNCETFAREDDEIRE-NEVGNGGSSEKTDTKIKKKRKRDDAVE----VDELEGD 120

Query: 121 NEKAKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKQGDVSGNDVKGQVEE 180
            E  K+ +  +K++ KKK KK+K NK     EE   +EK K                VEE
Sbjct: 121 -EGTKEEQKPQKKKNKKKKKKRKVNKTPKKAEEGNVEEKVK----------------VEE 180

Query: 181 THYNI-GSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIA 240
              N    E D  +  K+YVGGIPY STED+I S+F SCG I ++DC   PE G F GIA
Sbjct: 181 IEVNTDNKEEDGVVPNKLYVGGIPYQSTEDEIRSYFRSCGVIIKVDCKMRPEDGAFSGIA 240

Query: 241 ILSFKTEAAAKRALACDGADMGGLFLKVQPYKGT------RKNRAADFSPGLVEGYNRIY 300
            ++F TE  AKRALA D A MG  +L +Q Y  T      R+  ++ F+P +V+GYNR+Y
Sbjct: 241 FITFDTEDGAKRALAFDRAAMGDRYLTIQQYVKTTTPSIPRRKTSSGFAPEMVDGYNRVY 300

Query: 301 IGNLSWDVTEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKI 360
           IGNL+WD TE D++KLF +C I S+R G +KETGEF+GYAHVDF D +S+  ALKLDQ++
Sbjct: 301 IGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKGYAHVDFKDSVSVAIALKLDQQV 360

Query: 361 IHGRPVKIRCAVPKKGT------ENGGGGAVAGAETHPEMNPEPI----PETKEAAVSVV 420
           I GRPVKI CA+  +        E    G+    +T+   +P P      E  +      
Sbjct: 361 ICGRPVKICCALKDRPATDHTPGETNNAGSYNMEDTYAAADPVPALAGRSEVDDGNYFAT 418

Query: 421 SAVSGKIRRRTCYECGEKGHLSSNCPNK-QLAD 429
           +  S K++RR CYECGEKGHLS+ CP K Q AD
Sbjct: 421 TVSSSKVKRRVCYECGEKGHLSTACPIKLQKAD 418

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BLAST of CsGy5G006790 vs. ExPASy Swiss-Prot
Match: P07909 (Heterogeneous nuclear ribonucleoprotein A1 OS=Drosophila melanogaster OX=7227 GN=Hrb98DE PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.8e-15
Identity = 52/191 (27.23%), Postives = 93/191 (48.69%), Query Frame = 0


Query: 189 KVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFK-----TEAAAK 248
           K+++GG+ Y +T++++ + FE  G I ++  MK P + + RG   +++       EA   
Sbjct: 32  KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKS 91

Query: 249 RALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLF 308
           R    DG         V+P +   +      SP       ++++G L  D  E  ++  F
Sbjct: 92  RPHKIDGR-------VVEPKRAVPRQDID--SPNAGATVKKLFVGALKDDHDEQSIRDYF 151

Query: 309 VNC-KIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKKG 368
            +   I  I   +DKETG+ RG+A V+F D   +   +   Q  ++G+ V ++ A+PK+ 
Sbjct: 152 QHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQN 211

Query: 369 TENGGGGAVAG 374
            + GGGG   G
Sbjct: 212 DQQGGGGGRGG 213

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BLAST of CsGy5G006790 vs. ExPASy Swiss-Prot
Match: P51989 (Heterogeneous nuclear ribonucleoprotein A2 homolog 1 OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.5e-13
Identity = 50/188 (26.60%), Postives = 91/188 (48.40%), Query Frame = 0


Query: 189 KVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALAC 248
           K+++GG+ + +TE+ + +++E  GT+T+   M+ P S + RG   ++F        A+A 
Sbjct: 10  KLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMAT 69

Query: 249 DGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLFVNC-K 308
               + G    V+P +   +  +A   PG      ++++G +  D  E  L++ F    K
Sbjct: 70  RPHTIDGRV--VEPKRAVAREESA--KPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGK 129

Query: 309 IASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPK------K 368
           I SI    DK++G+ RG+A V F D   +   +      I+G   ++R A+ K      +
Sbjct: 130 IDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQEMQDVQ 189

Query: 369 GTENGGGG 370
            T N  GG
Sbjct: 190 NTRNNRGG 193

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BLAST of CsGy5G006790 vs. ExPASy Swiss-Prot
Match: Q04836 (31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31A PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.4e-13
Identity = 66/228 (28.95%), Postives = 113/228 (49.56%), Query Frame = 0


Query: 145 EEEKEKEKEKEKEKQGDVS-GNDVKGQVEETHYNIGSEFDE-NLATKVYVGGIPYYSTED 204
           ++  E ++ +    +GDVS G++ +G V E   +  +EF E +   K++VG + Y     
Sbjct: 105 QDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQ 164

Query: 205 DICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRAL-ACDGADMGGLFLKVQ 264
            +   FE  GT+   + +   E+ + RG   ++  +   A+ A+   +  D+ G  L V 
Sbjct: 165 ALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN 224

Query: 265 PY--KGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLF-VNCKIASIRFGMDKE 324
               +G+R  RA    P + E   R+Y+GNL WDV    L++LF  + K+   R   D+E
Sbjct: 225 KAAPRGSRPERA----PRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRE 284

Query: 325 TGEFRGYAHVDFSDGISLKTALK-LDQKIIHGRPVKIRCA---VPKKG 363
           TG  RG+  V  SD   L  A+  LD + + GR +++  A    P++G
Sbjct: 285 TGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRG 328

[Close]

BLAST of CsGy5G006790 vs. ExPASy Swiss-Prot
Match: P48810 (Heterogeneous nuclear ribonucleoprotein 87F OS=Drosophila melanogaster OX=7227 GN=Hrb87F PE=2 SV=2)

HSP 1 Score: 75.5 bits (184), Expect = 1.7e-12
Identity = 53/218 (24.31%), Postives = 100/218 (45.87%), Query Frame = 0


Query: 158 KQGDVSGNDVKGQVEETHYNIGSEFDE-NLATKVYVGGIPYYSTEDDICSFFESCGTITE 217
           +Q D +GN          Y+ G E  E     K+++GG+ Y +T+D + + FE  G I +
Sbjct: 3   EQNDSNGN----------YDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVD 62

Query: 218 IDCMKFPESGKFRGIAILSFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSP 277
           +  MK P++ + RG   +++        A       + G    V+P +   +      SP
Sbjct: 63  VVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKIDG--RTVEPKRAVPRQEID--SP 122

Query: 278 GLVEGYNRIYIGNLSWDVTEDDLKKLFVNC-KIASIRFGMDKETGEFRGYAHVDFSDGIS 337
                  ++++G L  D  E+ L++ F +  +I S+    DK+TG+ RG+A ++F D   
Sbjct: 123 NAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDP 182

Query: 338 LKTALKLDQKIIHGRPVKIRCAVPKKGTENGGGGAVAG 374
           +   +      I  + + ++ A+ K+  +  GGG   G
Sbjct: 183 VDKIILQKTHSIKNKTLDVKKAIAKQDMDRQGGGGGRG 206

[Close]

BLAST of CsGy5G006790 vs. NCBI nr
Match: XP_031742307.1 (protein gar2 [Cucumis sativus] >KAE8647980.1 hypothetical protein Csa_000404 [Cucumis sativus])

HSP 1 Score: 815 bits (2104), Expect = 8.34e-297
Identity = 432/432 (100.00%), Postives = 432/432 (100.00%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL
Sbjct: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60

Query: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVDGLEEDNEKAKKL 120
           SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVDGLEEDNEKAKKL
Sbjct: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVDGLEEDNEKAKKL 120

Query: 121 KNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNIGS 180
           KNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNIGS
Sbjct: 121 KNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNIGS 180

Query: 181 EFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEA 240
           EFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEA
Sbjct: 181 EFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEA 240

Query: 241 AAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLK 300
           AAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLK
Sbjct: 241 AAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLK 300

Query: 301 KLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPK 360
           KLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPK
Sbjct: 301 KLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPK 360

Query: 361 KGTENGGGGAVAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLSSN 420
           KGTENGGGGAVAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLSSN
Sbjct: 361 KGTENGGGGAVAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLSSN 420

Query: 421 CPNKQLADSVTS 432
           CPNKQLADSVTS
Sbjct: 421 CPNKQLADSVTS 432

[Close]

BLAST of CsGy5G006790 vs. NCBI nr
Match: XP_008461639.1 (PREDICTED: RNA-binding protein CP31B, chloroplastic [Cucumis melo])

HSP 1 Score: 726 bits (1873), Expect = 1.21e-261
Identity = 397/440 (90.23%), Postives = 408/440 (92.73%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQKLREKLAESLISSVAG+DTN  VSGERDTESPRKSLKELLGTASG+GPRL
Sbjct: 1   MVLSNKKLKQKLREKLAESLISSVAGKDTNVDVSGERDTESPRKSLKELLGTASGHGPRL 60

Query: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGE----KKRKRNEGVKEKNAVDGLEEDNEK 120
           SKREKRRESL+LTGSDGNK EKKE+ENQGLGE    KKRKRNEGVKEKNAVDGLE+D EK
Sbjct: 61  SKREKRRESLILTGSDGNKNEKKEEENQGLGEMKREKKRKRNEGVKEKNAVDGLEKDKEK 120

Query: 121 AKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKQGDVSGNDVKGQVEETHY 180
           AKKLKNKKKQQQKKK  KKKSNKKENNGEEE        KEKQGDVSGNDVKGQVEETHY
Sbjct: 121 AKKLKNKKKQQQKKK--KKKSNKKENNGEEE--------KEKQGDVSGNDVKGQVEETHY 180

Query: 181 NIGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSF 240
           NIGSEF+ENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSF
Sbjct: 181 NIGSEFNENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSF 240

Query: 241 KTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTE 300
           KTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIY+GNLSWDVTE
Sbjct: 241 KTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYMGNLSWDVTE 300

Query: 301 DDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRC 360
           DDLKKLF NCKI SIRFGMDKETGEFRGYAHVDFSD ISLKTALKLDQ+IIHGRPVKIRC
Sbjct: 301 DDLKKLFSNCKIGSIRFGMDKETGEFRGYAHVDFSDSISLKTALKLDQEIIHGRPVKIRC 360

Query: 361 AVPKKGTENGGGGAVAGA--ETHPEMNPEPIPETKEA--AVSVVSAVSGKIRRRTCYECG 420
           AVPKKGTE GGGGA A A  E HPEMN EP+PETKEA  A SVV++VSGKIRRRTCYECG
Sbjct: 361 AVPKKGTEKGGGGAAAVAREEMHPEMNLEPMPETKEAQAAESVVNSVSGKIRRRTCYECG 420

Query: 421 EKGHLSSNCPNKQLADSVTS 432
           EKGHLSSNCPNKQ ADSVTS
Sbjct: 421 EKGHLSSNCPNKQPADSVTS 430

[Close]

BLAST of CsGy5G006790 vs. NCBI nr
Match: XP_038891335.1 (protein gar2 [Benincasa hispida])

HSP 1 Score: 660 bits (1703), Expect = 8.87e-236
Identity = 364/440 (82.73%), Postives = 387/440 (87.95%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLK+KLREKLAESLISSVAG+D+N  VSGE DTES RKSLKELLGT   +GPRL
Sbjct: 1   MVLSNKKLKKKLREKLAESLISSVAGKDSNGDVSGEPDTESRRKSLKELLGTVCRHGPRL 60

Query: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGE----KKRKRNEGVKEKNAVDGLEEDNEK 120
           SKREKRRESL+LT SDGNK EKKED N+GLGE    KKRKR+EG KEKN VDGLEE+NEK
Sbjct: 61  SKREKRRESLILTASDGNKDEKKEDGNRGLGETKREKKRKRDEGAKEKNLVDGLEENNEK 120

Query: 121 AKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKQGDVSGNDVKGQVEETHY 180
           AKKLK KKKQQ+KKK   KKSNKK  NGEEE        +EKQG+VSGN+VK QVEETHY
Sbjct: 121 AKKLKKKKKQQKKKK---KKSNKKAKNGEEE--------EEKQGEVSGNEVKVQVEETHY 180

Query: 181 NIGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSF 240
           NIGSEF+ENLATKVYVGGIPYYSTEDDIC FFESCGTITEIDCMKFPESGKFRGIAIL+F
Sbjct: 181 NIGSEFNENLATKVYVGGIPYYSTEDDICCFFESCGTITEIDCMKFPESGKFRGIAILTF 240

Query: 241 KTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTE 300
           KTEAAAKRALA DGADMGGLFLKVQPYKGTR NRA DFSP +VEGYNRIY+GNLSWDVTE
Sbjct: 241 KTEAAAKRALAWDGADMGGLFLKVQPYKGTRTNRAVDFSPAIVEGYNRIYLGNLSWDVTE 300

Query: 301 DDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRC 360
           DDLKKLF NCKIASIRFGMDKETGEFRGYAHVDFSD +SLKTALKLDQ IIHGRPVKIRC
Sbjct: 301 DDLKKLFANCKIASIRFGMDKETGEFRGYAHVDFSDNVSLKTALKLDQNIIHGRPVKIRC 360

Query: 361 AVPKKGTENGGGGAVAGA---ETHPEMNPEPIPETKEAA-VSVVSAVSGKIRRRTCYECG 420
           AVPKKGTE  GG A A A   ETH EM+P+P+PETKEAA  +VVS+VSGKIRRRTCYECG
Sbjct: 361 AVPKKGTERRGGEAAAAAAVAETHLEMHPDPMPETKEAAETTVVSSVSGKIRRRTCYECG 420

Query: 421 EKGHLSSNCPNKQLADSVTS 432
           EKGHLSS+CP KQL DSV S
Sbjct: 421 EKGHLSSHCPKKQLVDSVAS 429

[Close]

BLAST of CsGy5G006790 vs. NCBI nr
Match: KAA0050286.1 (RNA-binding protein CP31B [Cucumis melo var. makuwa])

HSP 1 Score: 598 bits (1542), Expect = 1.48e-212
Identity = 324/436 (74.31%), Postives = 333/436 (76.38%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQKLREKLAESLISSVAG+DTN  VSGERDTESPRKSLKELLGTASG+GPRL
Sbjct: 1   MVLSNKKLKQKLREKLAESLISSVAGKDTNVDVSGERDTESPRKSLKELLGTASGHGPRL 60

Query: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVDGLEEDNEKAKKL 120
           SKREKRRESL+LT                                               
Sbjct: 61  SKREKRRESLILT----------------------------------------------- 120

Query: 121 KNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNIGS 180
                                                   DVSGNDVKGQVEETHYNIGS
Sbjct: 121 ----------------------------------------DVSGNDVKGQVEETHYNIGS 180

Query: 181 EFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEA 240
           EF+ENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEA
Sbjct: 181 EFNENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEA 240

Query: 241 AAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLK 300
           AAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIY+GNLSWDVTEDDLK
Sbjct: 241 AAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYMGNLSWDVTEDDLK 300

Query: 301 KLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPK 360
           KLF NCKI SIRFGMDKETGEFRGYAHVDFSD ISLKTALKLDQ+IIHGRPVKIRCAVPK
Sbjct: 301 KLFSNCKIGSIRFGMDKETGEFRGYAHVDFSDSISLKTALKLDQEIIHGRPVKIRCAVPK 349

Query: 361 KGTENGGGGAVAGA--ETHPEMNPEPIPETKEA--AVSVVSAVSGKIRRRTCYECGEKGH 420
           KGTE GGGGA A A  E HPEMN EP+PETKEA  A SVV++VSGKIRRRTCYECGEKGH
Sbjct: 361 KGTEKGGGGAAAVAREEMHPEMNLEPMPETKEAQAAESVVNSVSGKIRRRTCYECGEKGH 349

Query: 421 LSSNCPNKQLADSVTS 432
           LSSNCPNKQ ADSVTS
Sbjct: 421 LSSNCPNKQPADSVTS 349

[Close]

BLAST of CsGy5G006790 vs. NCBI nr
Match: XP_022986056.1 (protein gar2-like [Cucurbita maxima])

HSP 1 Score: 587 bits (1512), Expect = 2.40e-206
Identity = 337/462 (72.94%), Postives = 370/462 (80.09%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQK REKLAESLISS+AGR +N  VSGE +++S  +SLKELLG    +G RL
Sbjct: 1   MVLSNKKLKQKFREKLAESLISSIAGRVSNGDVSGEPESDSRPQSLKELLGGTGRHGTRL 60

Query: 61  SKREKRRESLVLTGSDG-NKKEKKEDENQGLGE----KKRKRNEGVKEKNAVDGLEEDNE 120
           SKREKRRES + T SDG N +EKKE ENQ LGE    KKRKRNE VKEK+AVDGLEED+E
Sbjct: 61  SKREKRRESFISTASDGKNDEEKKEGENQRLGERKGEKKRKRNEEVKEKSAVDGLEEDDE 120

Query: 121 KAKKLK----NKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKQGDVSGNDVKGQV 180
           KAKKLK    NKKK++++KK KK+KSN+K  N EEE        KEKQG   GN+V GQV
Sbjct: 121 KAKKLKKNKMNKKKKKKQKKQKKQKSNEKAKNSEEE--------KEKQGGEDGNEVLGQV 180

Query: 181 EETHYNIGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGI 240
           EETH NIGS+ +EN+ATKVYVGGIPYYSTEDDICSFFESCGTITE+DCM FPESGKFRGI
Sbjct: 181 EETHDNIGSQVNENVATKVYVGGIPYYSTEDDICSFFESCGTITEVDCMMFPESGKFRGI 240

Query: 241 AILSFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLS 300
           AILSFKTEAAAKRALA DGADMGGLFLKVQPYKGTR N+A DFSPG+VEGYNRIY+GNLS
Sbjct: 241 AILSFKTEAAAKRALAMDGADMGGLFLKVQPYKGTRSNKAVDFSPGIVEGYNRIYLGNLS 300

Query: 301 WDVTEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRP 360
           WDVTEDDLKKLF +CKIASIRFGMDKETGEFRGYAHVDFSD +SLKTALKLDQ+ IHGRP
Sbjct: 301 WDVTEDDLKKLFASCKIASIRFGMDKETGEFRGYAHVDFSDSVSLKTALKLDQETIHGRP 360

Query: 361 VKIRCAVPKKGTENGGGGAVA---------GAETHP------------EMNPEPIPETKE 420
           VKIRCAVPK+GT  GGG A A          A T P            E  P+P+PE   
Sbjct: 361 VKIRCAVPKQGTARGGGAAAAPPPPPAFTTAAATPPPPPPPAPTLAAAETLPKPVPEMA- 420

Query: 421 AAVSVVSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSVTS 432
            A S +S VSGKIRRRTCYECGEKGHLSSNCP KQ+ADSV S
Sbjct: 421 VADSGLSTVSGKIRRRTCYECGEKGHLSSNCPTKQVADSVAS 453

[Close]

BLAST of CsGy5G006790 vs. ExPASy TrEMBL
Match: A0A0A0KLT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G180870 PE=4 SV=1)

HSP 1 Score: 791 bits (2043), Expect = 5.21e-287
Identity = 432/482 (89.63%), Postives = 432/482 (89.63%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL
Sbjct: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60

Query: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVDGLEEDNEKAKKL 120
           SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVDGLEEDNEKAKKL
Sbjct: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVDGLEEDNEKAKKL 120

Query: 121 KNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEK---------------------- 180
           KNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEK                      
Sbjct: 121 KNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEK 180

Query: 181 ----------------------------QGDVSGNDVKGQVEETHYNIGSEFDENLATKV 240
                                       QGDVSGNDVKGQVEETHYNIGSEFDENLATKV
Sbjct: 181 EKEKEKEKEKEKEKEKEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNIGSEFDENLATKV 240

Query: 241 YVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALACDG 300
           YVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALACDG
Sbjct: 241 YVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALACDG 300

Query: 301 ADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLFVNCKIAS 360
           ADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLFVNCKIAS
Sbjct: 301 ADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLFVNCKIAS 360

Query: 361 IRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKKGTENGGGGA 420
           IRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKKGTENGGGGA
Sbjct: 361 IRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKKGTENGGGGA 420

Query: 421 VAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSV 432
           VAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSV
Sbjct: 421 VAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSV 480

[Close]

BLAST of CsGy5G006790 vs. ExPASy TrEMBL
Match: A0A1S3CF29 (RNA-binding protein CP31B, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500194 PE=4 SV=1)

HSP 1 Score: 726 bits (1873), Expect = 5.83e-262
Identity = 397/440 (90.23%), Postives = 408/440 (92.73%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQKLREKLAESLISSVAG+DTN  VSGERDTESPRKSLKELLGTASG+GPRL
Sbjct: 1   MVLSNKKLKQKLREKLAESLISSVAGKDTNVDVSGERDTESPRKSLKELLGTASGHGPRL 60

Query: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGE----KKRKRNEGVKEKNAVDGLEEDNEK 120
           SKREKRRESL+LTGSDGNK EKKE+ENQGLGE    KKRKRNEGVKEKNAVDGLE+D EK
Sbjct: 61  SKREKRRESLILTGSDGNKNEKKEEENQGLGEMKREKKRKRNEGVKEKNAVDGLEKDKEK 120

Query: 121 AKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKQGDVSGNDVKGQVEETHY 180
           AKKLKNKKKQQQKKK  KKKSNKKENNGEEE        KEKQGDVSGNDVKGQVEETHY
Sbjct: 121 AKKLKNKKKQQQKKK--KKKSNKKENNGEEE--------KEKQGDVSGNDVKGQVEETHY 180

Query: 181 NIGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSF 240
           NIGSEF+ENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSF
Sbjct: 181 NIGSEFNENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSF 240

Query: 241 KTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTE 300
           KTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIY+GNLSWDVTE
Sbjct: 241 KTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYMGNLSWDVTE 300

Query: 301 DDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRC 360
           DDLKKLF NCKI SIRFGMDKETGEFRGYAHVDFSD ISLKTALKLDQ+IIHGRPVKIRC
Sbjct: 301 DDLKKLFSNCKIGSIRFGMDKETGEFRGYAHVDFSDSISLKTALKLDQEIIHGRPVKIRC 360

Query: 361 AVPKKGTENGGGGAVAGA--ETHPEMNPEPIPETKEA--AVSVVSAVSGKIRRRTCYECG 420
           AVPKKGTE GGGGA A A  E HPEMN EP+PETKEA  A SVV++VSGKIRRRTCYECG
Sbjct: 361 AVPKKGTEKGGGGAAAVAREEMHPEMNLEPMPETKEAQAAESVVNSVSGKIRRRTCYECG 420

Query: 421 EKGHLSSNCPNKQLADSVTS 432
           EKGHLSSNCPNKQ ADSVTS
Sbjct: 421 EKGHLSSNCPNKQPADSVTS 430

[Close]

BLAST of CsGy5G006790 vs. ExPASy TrEMBL
Match: A0A5A7U7X8 (RNA-binding protein CP31B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold88G00050 PE=4 SV=1)

HSP 1 Score: 598 bits (1542), Expect = 7.18e-213
Identity = 324/436 (74.31%), Postives = 333/436 (76.38%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQKLREKLAESLISSVAG+DTN  VSGERDTESPRKSLKELLGTASG+GPRL
Sbjct: 1   MVLSNKKLKQKLREKLAESLISSVAGKDTNVDVSGERDTESPRKSLKELLGTASGHGPRL 60

Query: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVDGLEEDNEKAKKL 120
           SKREKRRESL+LT                                               
Sbjct: 61  SKREKRRESLILT----------------------------------------------- 120

Query: 121 KNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNIGS 180
                                                   DVSGNDVKGQVEETHYNIGS
Sbjct: 121 ----------------------------------------DVSGNDVKGQVEETHYNIGS 180

Query: 181 EFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEA 240
           EF+ENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEA
Sbjct: 181 EFNENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEA 240

Query: 241 AAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLK 300
           AAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIY+GNLSWDVTEDDLK
Sbjct: 241 AAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYMGNLSWDVTEDDLK 300

Query: 301 KLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPK 360
           KLF NCKI SIRFGMDKETGEFRGYAHVDFSD ISLKTALKLDQ+IIHGRPVKIRCAVPK
Sbjct: 301 KLFSNCKIGSIRFGMDKETGEFRGYAHVDFSDSISLKTALKLDQEIIHGRPVKIRCAVPK 349

Query: 361 KGTENGGGGAVAGA--ETHPEMNPEPIPETKEA--AVSVVSAVSGKIRRRTCYECGEKGH 420
           KGTE GGGGA A A  E HPEMN EP+PETKEA  A SVV++VSGKIRRRTCYECGEKGH
Sbjct: 361 KGTEKGGGGAAAVAREEMHPEMNLEPMPETKEAQAAESVVNSVSGKIRRRTCYECGEKGH 349

Query: 421 LSSNCPNKQLADSVTS 432
           LSSNCPNKQ ADSVTS
Sbjct: 421 LSSNCPNKQPADSVTS 349

[Close]

BLAST of CsGy5G006790 vs. ExPASy TrEMBL
Match: A0A6J1JA04 (protein gar2-like OS=Cucurbita maxima OX=3661 GN=LOC111483911 PE=4 SV=1)

HSP 1 Score: 587 bits (1512), Expect = 1.16e-206
Identity = 337/462 (72.94%), Postives = 370/462 (80.09%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQK REKLAESLISS+AGR +N  VSGE +++S  +SLKELLG    +G RL
Sbjct: 1   MVLSNKKLKQKFREKLAESLISSIAGRVSNGDVSGEPESDSRPQSLKELLGGTGRHGTRL 60

Query: 61  SKREKRRESLVLTGSDG-NKKEKKEDENQGLGE----KKRKRNEGVKEKNAVDGLEEDNE 120
           SKREKRRES + T SDG N +EKKE ENQ LGE    KKRKRNE VKEK+AVDGLEED+E
Sbjct: 61  SKREKRRESFISTASDGKNDEEKKEGENQRLGERKGEKKRKRNEEVKEKSAVDGLEEDDE 120

Query: 121 KAKKLK----NKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKQGDVSGNDVKGQV 180
           KAKKLK    NKKK++++KK KK+KSN+K  N EEE        KEKQG   GN+V GQV
Sbjct: 121 KAKKLKKNKMNKKKKKKQKKQKKQKSNEKAKNSEEE--------KEKQGGEDGNEVLGQV 180

Query: 181 EETHYNIGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGI 240
           EETH NIGS+ +EN+ATKVYVGGIPYYSTEDDICSFFESCGTITE+DCM FPESGKFRGI
Sbjct: 181 EETHDNIGSQVNENVATKVYVGGIPYYSTEDDICSFFESCGTITEVDCMMFPESGKFRGI 240

Query: 241 AILSFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLS 300
           AILSFKTEAAAKRALA DGADMGGLFLKVQPYKGTR N+A DFSPG+VEGYNRIY+GNLS
Sbjct: 241 AILSFKTEAAAKRALAMDGADMGGLFLKVQPYKGTRSNKAVDFSPGIVEGYNRIYLGNLS 300

Query: 301 WDVTEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRP 360
           WDVTEDDLKKLF +CKIASIRFGMDKETGEFRGYAHVDFSD +SLKTALKLDQ+ IHGRP
Sbjct: 301 WDVTEDDLKKLFASCKIASIRFGMDKETGEFRGYAHVDFSDSVSLKTALKLDQETIHGRP 360

Query: 361 VKIRCAVPKKGTENGGGGAVA---------GAETHP------------EMNPEPIPETKE 420
           VKIRCAVPK+GT  GGG A A          A T P            E  P+P+PE   
Sbjct: 361 VKIRCAVPKQGTARGGGAAAAPPPPPAFTTAAATPPPPPPPAPTLAAAETLPKPVPEMA- 420

Query: 421 AAVSVVSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSVTS 432
            A S +S VSGKIRRRTCYECGEKGHLSSNCP KQ+ADSV S
Sbjct: 421 VADSGLSTVSGKIRRRTCYECGEKGHLSSNCPTKQVADSVAS 453

[Close]

BLAST of CsGy5G006790 vs. ExPASy TrEMBL
Match: A0A6J1FSC3 (protein gar2 OS=Cucurbita moschata OX=3662 GN=LOC111447996 PE=4 SV=1)

HSP 1 Score: 584 bits (1506), Expect = 8.54e-206
Identity = 332/459 (72.33%), Postives = 364/459 (79.30%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQK REKLAESLISS+AG+ +N  VSGE +++S  +SLKELLG    +G RL
Sbjct: 1   MVLSNKKLKQKFREKLAESLISSIAGKVSNGDVSGEPESDSRPQSLKELLGGTGRHGTRL 60

Query: 61  SKREKRRESLVLTGSDG-NKKEKKEDENQGLGE----KKRKRNEGVKEKNAVDGLEEDNE 120
           SKREKRRES++ T SDG N +EKKE ENQ LGE    KKRKRNE VKEK+AVDGLEED+E
Sbjct: 61  SKREKRRESVISTASDGKNDEEKKEGENQRLGERKGEKKRKRNEEVKEKSAVDGLEEDDE 120

Query: 121 KAKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKQGDVSGNDVKGQVEETH 180
           KAKKLK KK +  KKK KK+K  KK+ + EEE        KEKQG   GN+V GQVEETH
Sbjct: 121 KAKKLKLKKNKMNKKKKKKQKKQKKQKSNEEE--------KEKQGGEDGNEVVGQVEETH 180

Query: 181 YNIGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILS 240
            NIGS+ +EN+ATKVYVGGIPYYSTEDDICSFFESCGTITE+DCM FPESGKFRGIAILS
Sbjct: 181 DNIGSQVNENVATKVYVGGIPYYSTEDDICSFFESCGTITEVDCMMFPESGKFRGIAILS 240

Query: 241 FKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVT 300
           FKTEAAAKRALA DGADMGGLFLKVQPYKGTR N+A DFSPG+VEGYNRIY+GNLSWDVT
Sbjct: 241 FKTEAAAKRALAMDGADMGGLFLKVQPYKGTRSNKAVDFSPGIVEGYNRIYLGNLSWDVT 300

Query: 301 EDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIR 360
           EDDLKKLF NCKIASIRFGMDKETGEFRGYAHVDFSD +SLKTALKLDQ+ IHGRPVKIR
Sbjct: 301 EDDLKKLFANCKIASIRFGMDKETGEFRGYAHVDFSDSVSLKTALKLDQETIHGRPVKIR 360

Query: 361 CAVPKKGTENGGGGAVAGAE----------------------THPEMNPEPIPETKEAAV 420
           CAVPK+GT  GGG A A A                          E  P+P+PE    A 
Sbjct: 361 CAVPKQGTARGGGAAAAAAPPAFTAAAAAPPPPPPPPPAPTLAAAETLPKPVPEMT-VAD 420

Query: 421 SVVSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSVTS 432
           S +S VSGKIRRRTCYECGEKGHLSSNCP KQ+ADSV S
Sbjct: 421 SGLSTVSGKIRRRTCYECGEKGHLSSNCPTKQVADSVAS 450

[Close]

BLAST of CsGy5G006790 vs. TAIR 10
Match: AT3G55340.1 (phragmoplastin interacting protein 1 )

HSP 1 Score: 280.4 bits (716), Expect = 2.4e-75
Identity = 202/453 (44.59%), Postives = 261/453 (57.62%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQ++R+ LAESL  SV+            +T    +SLK LL ++S + PRL
Sbjct: 1   MVLSNKKLKQRIRQDLAESLSVSVS------------ETNPQSQSLKLLLDSSS-HKPRL 60

Query: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGE-------KKRKRNEGVKEKNAVDGLEED 120
           SKREKRR        D   +E  E  N G  E       KKRKR++ V+    VD LE D
Sbjct: 61  SKREKRRNCETFAREDDEIRE-NEVGNGGSSEKTDTKIKKKRKRDDAVE----VDELEGD 120

Query: 121 NEKAKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKQGDVSGNDVKGQVEE 180
            E  K+ +  +K++ KKK KK+K NK     EE   +EK K                VEE
Sbjct: 121 -EGTKEEQKPQKKKNKKKKKKRKVNKTPKKAEEGNVEEKVK----------------VEE 180

Query: 181 THYNI-GSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIA 240
              N    E D  +  K+YVGGIPY STED+I S+F SCG I ++DC   PE G F GIA
Sbjct: 181 IEVNTDNKEEDGVVPNKLYVGGIPYQSTEDEIRSYFRSCGVIIKVDCKMRPEDGAFSGIA 240

Query: 241 ILSFKTEAAAKRALACDGADMGGLFLKVQPYKGT------RKNRAADFSPGLVEGYNRIY 300
            ++F TE  AKRALA D A MG  +L +Q Y  T      R+  ++ F+P +V+GYNR+Y
Sbjct: 241 FITFDTEDGAKRALAFDRAAMGDRYLTIQQYVKTTTPSIPRRKTSSGFAPEMVDGYNRVY 300

Query: 301 IGNLSWDVTEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKI 360
           IGNL+WD TE D++KLF +C I S+R G +KETGEF+GYAHVDF D +S+  ALKLDQ++
Sbjct: 301 IGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKGYAHVDFKDSVSVAIALKLDQQV 360

Query: 361 IHGRPVKIRCAVPKKGT------ENGGGGAVAGAETHPEMNPEPI----PETKEAAVSVV 420
           I GRPVKI CA+  +        E    G+    +T+   +P P      E  +      
Sbjct: 361 ICGRPVKICCALKDRPATDHTPGETNNAGSYNMEDTYAAADPVPALAGRSEVDDGNYFAT 418

Query: 421 SAVSGKIRRRTCYECGEKGHLSSNCPNK-QLAD 429
           +  S K++RR CYECGEKGHLS+ CP K Q AD
Sbjct: 421 TVSSSKVKRRVCYECGEKGHLSTACPIKLQKAD 418

[Close]

BLAST of CsGy5G006790 vs. TAIR 10
Match: AT4G24770.1 (31-kDa RNA binding protein )

HSP 1 Score: 77.8 bits (190), Expect = 2.4e-14
Identity = 66/228 (28.95%), Postives = 113/228 (49.56%), Query Frame = 0


Query: 145 EEEKEKEKEKEKEKQGDVS-GNDVKGQVEETHYNIGSEFDE-NLATKVYVGGIPYYSTED 204
           ++  E ++ +    +GDVS G++ +G V E   +  +EF E +   K++VG + Y     
Sbjct: 105 QDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQ 164

Query: 205 DICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRAL-ACDGADMGGLFLKVQ 264
            +   FE  GT+   + +   E+ + RG   ++  +   A+ A+   +  D+ G  L V 
Sbjct: 165 ALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN 224

Query: 265 PY--KGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLF-VNCKIASIRFGMDKE 324
               +G+R  RA    P + E   R+Y+GNL WDV    L++LF  + K+   R   D+E
Sbjct: 225 KAAPRGSRPERA----PRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRE 284

Query: 325 TGEFRGYAHVDFSDGISLKTALK-LDQKIIHGRPVKIRCA---VPKKG 363
           TG  RG+  V  SD   L  A+  LD + + GR +++  A    P++G
Sbjct: 285 TGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRG 328

[Close]

BLAST of CsGy5G006790 vs. TAIR 10
Match: AT5G50250.1 (chloroplast RNA-binding protein 31B )

HSP 1 Score: 73.9 bits (180), Expect = 3.5e-13
Identity = 60/211 (28.44%), Postives = 97/211 (45.97%), Query Frame = 0


Query: 153 EKEKEKQGDVSGNDVKGQVEETHYNIGSEFDE-NLATKVYVGGIPYYSTEDDICSFFESC 212
           E+E+ + G + G  V    E      G  F E     K++VG +PY      +   FE  
Sbjct: 78  EEEEGEDGSIGGTSVTVD-ESFESEDGVGFPEPPEEAKLFVGNLPYDVDSQALAMLFEQA 137

Query: 213 GTITEIDCMKFPESGKFRGIAILSFKT-EAAAKRALACDGADMGGLFLKVQ--PYKGTRK 272
           GT+   + +   ++ + RG   ++  T E A K     +  ++ G  L V     +G+R 
Sbjct: 138 GTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRAAPRGSRP 197

Query: 273 NRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLF-VNCKIASIRFGMDKETGEFRGYAH 332
            R     P + +   RIY+GNL WDV    L++LF  + K+   R   D+ETG  RG+  
Sbjct: 198 ER----QPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGF 257

Query: 333 VDFSDGISLKTAL-KLDQKIIHGRPVKIRCA 358
           V  S+   +  A+  LD + + GR +K+  A
Sbjct: 258 VQMSNENEVNVAIAALDGQNLEGRAIKVNVA 283

The following BLAST results are available for this feature:

BLAST of CsGy5G006790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3B8	3.4e-74	44.59	Phragmoplastin interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=PHIP1 PE...	[more]
P07909	2.8e-15	27.23	Heterogeneous nuclear ribonucleoprotein A1 OS=Drosophila melanogaster OX=7227 GN...	[more]
P51989	1.5e-13	26.60	Heterogeneous nuclear ribonucleoprotein A2 homolog 1 OS=Xenopus laevis OX=8355 P...	[more]
Q04836	3.4e-13	28.95	31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31A...	[more]
P48810	1.7e-12	24.31	Heterogeneous nuclear ribonucleoprotein 87F OS=Drosophila melanogaster OX=7227 G...	[more]

BLAST of CsGy5G006790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031742307.1	8.34e-297	100.00	protein gar2 [Cucumis sativus] >KAE8647980.1 hypothetical protein Csa_000404 [Cu...	[more]
XP_008461639.1	1.21e-261	90.23	PREDICTED: RNA-binding protein CP31B, chloroplastic [Cucumis melo]	[more]
XP_038891335.1	8.87e-236	82.73	protein gar2 [Benincasa hispida]	[more]
KAA0050286.1	1.48e-212	74.31	RNA-binding protein CP31B [Cucumis melo var. makuwa]	[more]
XP_022986056.1	2.40e-206	72.94	protein gar2-like [Cucurbita maxima]	[more]

BLAST of CsGy5G006790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLT8	5.21e-287	89.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G180870 PE=4 SV=1	[more]
A0A1S3CF29	5.83e-262	90.23	RNA-binding protein CP31B, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500194...	[more]
A0A5A7U7X8	7.18e-213	74.31	RNA-binding protein CP31B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A6J1JA04	1.16e-206	72.94	protein gar2-like OS=Cucurbita maxima OX=3661 GN=LOC111483911 PE=4 SV=1	[more]
A0A6J1FSC3	8.54e-206	72.33	protein gar2 OS=Cucurbita moschata OX=3662 GN=LOC111447996 PE=4 SV=1	[more]

BLAST of CsGy5G006790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55340.1	2.4e-75	44.59	phragmoplastin interacting protein 1	[more]
AT4G24770.1	2.4e-14	28.95	31-kDa RNA binding protein	[more]
AT5G50250.1	3.5e-13	28.44	chloroplast RNA-binding protein 31B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 107..158
None	No IPR available	GENE3D	4.10.60.10		coord: 400..428 e-value: 1.9E-7 score: 32.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 363..385
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..170
None	No IPR available	PANTHER	PTHR23236	EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H	coord: 63..430
None	No IPR available	PANTHER	PTHR23236:SF24	PHRAGMOPLASTIN INTERACTING PROTEIN 1-RELATED	coord: 63..430
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 284..355 e-value: 5.0E-19 score: 79.2 coord: 189..261 e-value: 2.8E-18 score: 76.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 285..353 e-value: 5.4E-12 score: 45.4 coord: 190..256 e-value: 5.2E-12 score: 45.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 283..359 score: 14.69226
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 188..265 score: 13.737158
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 407..423 e-value: 1.4E-4 score: 31.2
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 406..423 e-value: 8.7E-6 score: 25.6
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 408..423 score: 10.691135
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 106..273 e-value: 4.2E-24 score: 87.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 279..367 e-value: 6.8E-22 score: 79.5
IPR034362	PHIP1, RNA recognition motif 2	CDD	cd12272	RRM2_PHIP1	coord: 284..354 e-value: 8.09541E-32 score: 114.026
IPR034361	PHIP1, RNA recognition motif 1	CDD	cd12271	RRM1_PHIP1	coord: 190..261 e-value: 2.09409E-38 score: 131.707
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 402..424
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 280..369
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 183..271

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G006790.2	CsGy5G006790.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding