CsGy5G005720 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G005720
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionchromosome transmission fidelity protein 8 homolog
LocationGy14Chr5: 3778287 .. 3781484 (+)
RNA-Seq ExpressionCsGy5G005720
SyntenyCsGy5G005720
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATGTTTACTAATGTATTAAAGAATTATAAATATGTTCGTGTGAGCTTGAGAATGAGAAAACGTGTGAATGTTCTTTCCAAACGGGCGGGAAGAGCTCTCTTATTTCCCGCCATTTTCCATCTACTCATCGGAGCTTCACGATTCCTTTTATTCTTTTATCTCTCAAAGCTGTGGAATCTTAAATCGGAAGCCATAGAAAGATGGAGATTAAGCTGAAATGTAACTGTGGCGAAACCAAATGCTTGGAATGGGCCGTCGTTGAGTTACAAGGCGTGGTTGAACCTCAATCCACCTTCCAAGATCGCCTTCAAAACCTCGAAATCGGCATTCTATGTCGACCCTCCGCTCAGGTACTTATTCCTTAGCCCCTGTTGTAACCCTAGAATTGGATTTCCATTTTTTGTAACCCAATTGATGATGAATTTGCGAAATTGGTCTCCAAGAGAGATTTTCGTTCCGGTGAACTCTTTTTGTTTTTCCATTACTGGTGATTTCTAACATTAAATTAGTTGCTTCTAGTTCTTTCAATTGATTGAGGGGTTGTTTTCTTGGGGTTGAAGGAAGTGTATACTTTTACAGTAGGGTACCATGAGCTGACAGGAAGCAAAATTTCTTTGAAGAAGCCATTGTTGGTGTTGAAGAAAACGAGGTCTGTGGATGAGGATCAGAGTAGCGATACTAAATCGGGTAATGCAGAGTTGGAAGTGATTGGGATCATTAGGCAGCGGATTCTGTTTAAGACCAGACCAAAGGCACTCATATCCAGTAAGTTTCTAAAAGTTGGATGGATTTTGAAAATGTTACTTCGAAAGAAAAAGCTTAAACAATAACGGATTTATTGGTAAAGAAAAATGTAGTTTCAGAGAATGGCTAATATTGAACCAAATACAAACAAATCTATTATGAACAATGTAAATCTTGCAATGTCAGTGGAAGTCTCATCGTTGCTTCTAGACGAGGAACATAATAATTAACGGGGAACAGTCTGAAAGTCGGTAGATTTAGATTTAGACTTGTGTTTTGGGCCCTAAACTCAAATGAAGTCACTTGCCAAAGGTTATCTGGCTATTTTTTCTTTCTAAAGAACCTACAAATAGAAATATTGGAAGGATTTTCGGCAGTGCAGCTACTTGGTCTTGACAAAATATTAGAAGAGGAGTAACCCCAAAAGAGTTCAAGGAAACAATGAACTATAAGCACAATAAAAGGAGCGACCTTTGATTTCAAATTAATCATAGTTTAAACCATTTAAGTTTGAGTGTAGTAACTCTAGCTAGGTTCTTTTTTTATATTCTCTAGTCTGAGGATGGAGCAAAGGTTGTGAATTACACACTACTTTGACAGTCTTTTTGAAATCTAAGAAACACTTATACAAGACATGTACCTAAAGAAGTTTTTTTTTTTCTTTTTTCTTTTTTTTTAAATTTAGGACACCGACACGCCAAGGATACACTTATTAAAATAACATTTTAAAAAATATATAACGTTTCTTATATTCGAAGAAAAATTGAATTAGATGAGTTAATGCACTTATATGCAGAAATTAGTTTGATGTATTTCATACTCAAAATTTATTATTATTATTGTCGTATATGTACCTTTTCAATCTCTGCATATATGTACCTTTTCAATCTATTTAACAACGATTCTATGAATGTTTAAGATATTTATTGCATTAATAAGGGTTTGATACTGACACATGTCTGACAAGTATTGGAGTGTGTAAGTGTTCGACGTAGTCACACTGGCTAGCCAAACTTGAGAACGAGATGGAGGATAAAATTTTGTGTGATTGTTCATAATGGGTTTGTTTTTAGTGGGTCATCATTTTTTGTCCAATTTTTAAGTTTTTACTGAAATTCTTATGTTTTCTACTTTTGTTGTTTTCTTTTAAATTTTCAACTATTTCTTACTTATTTATGCTATAGAAGTGGTAGGTTTTTCCAACAAAAGTGTTGATTGTTAAGCGTGGATTTTGGTAATGTTTCCATAGCCTCATAGTTTGTCTGTTTTTCAAATAATCTTGTTGTTTTCACTTTCTAATTTGGATAATTTTCTCAATGAATTGAATGCATGTTAAAGTAACCTGGCCATCATCTTGGATTTGGCCTTGAGTGTGTAAAGGCCAAATTAACAGAATCTGTTCAATAAGTGGGTACACTGTTATGAATAACATTAAACATGCTTTAATTTCTGTATAGAGATATTTTCTTTCACTTCTTTTCTCTTCTTAGGTGCAATGTTTAATCCTATTGTGGTTTTTGCTTCTTCAGAACCACAGCCATTGGTTAAGGAAAGATCCCGTGCTTCAGGATCTGCAGTGACAGGCCAAACAACATGAGTTCTGTGTTTATAGGTGAAATGAAATCCATCCATATTTTTGTTTCCATAGATTCTATCACGAAGGTGGAATGAAATTATTGATTTATCATTCACTCATCCTAATATATTTATTTTCTCAACCAGGAAAAAGAAAATCTTATCAATCTTACTCCCAAGAATACTGTGATAAGTAAGTTATTTTCCAACTTTACATTTAATACAAGATTCAACAACCTTTTTTCTCAGCCATATTGGTGTTTATTTCCAAATTTGCATGTTTAAATCTTATTTTGGTCTGAAAAGTGCTATCATACCTCTTTTGAGTTTTGTTGGTTGCATCCAGATATACTGTCTATGGTGTGTCGTGAAACTACAAAACTTTTTCAAATTTTTATATGTGGCTAGGATATGTCTCAACATTGATATGACTTTTATAAATGTAACGTTTTTCAATTGAATTTTAGGGTGTACACCTTGGACGTTATAGTGGCAACGAGGATTCTTTCATAATTTTTTTTCTTTCCTTTTTTTGTTGTACCTTTGATCAAGTTTTATTGAGAAGTCCGAGGTTTTGTTTTCTGTGTGTAGATTTGACTAAAGTTGACTACTTTCAACTAAAGTTTATCAAAAGCTAATTAATTCAAAACTTATTTTTTTAAAAAAAGTTCACTTTCATAGCCATAAGTTCTATAGAAAGATTTATATAGTAAAATTCAAACAATTATTATAATTATTAAAATAATTGAAAAAGATTAAATAGCATAGCTTAATATTACAACTATAAATACTATATTATAACCTAATATTTCAACCATAAATATTATATTACAGTGTTGAAAAGAAGCTATTATATGTTAAAGATAGTATATTATT

mRNA sequence

AAAATGTTTACTAATGTATTAAAGAATTATAAATATGTTCGTGTGAGCTTGAGAATGAGAAAACGTGTGAATGTTCTTTCCAAACGGGCGGGAAGAGCTCTCTTATTTCCCGCCATTTTCCATCTACTCATCGGAGCTTCACGATTCCTTTTATTCTTTTATCTCTCAAAGCTGTGGAATCTTAAATCGGAAGCCATAGAAAGATGGAGATTAAGCTGAAATGTAACTGTGGCGAAACCAAATGCTTGGAATGGGCCGTCGTTGAGTTACAAGGCGTGGTTGAACCTCAATCCACCTTCCAAGATCGCCTTCAAAACCTCGAAATCGGCATTCTATGTCGACCCTCCGCTCAGGAAGTGTATACTTTTACAGTAGGGTACCATGAGCTGACAGGAAGCAAAATTTCTTTGAAGAAGCCATTGTTGGTGTTGAAGAAAACGAGGTCTGTGGATGAGGATCAGAGTAGCGATACTAAATCGGGTAATGCAGAGTTGGAAGTGATTGGGATCATTAGGCAGCGGATTCTGTTTAAGACCAGACCAAAGGCACTCATATCCAAACCACAGCCATTGGTTAAGGAAAGATCCCGTGCTTCAGGATCTGCAGTGACAGGCCAAACAACATGAGTTCTGTGTTTATAGGAAAAAGAAAATCTTATCAATCTTACTCCCAAGAATACTGTGATAAGTAAGTTATTTTCCAACTTTACATTTAATACAAGATTCAACAACCTTTTTTCTCAGCCATATTGGTGTTTATTTCCAAATTTGCATGTTTAAATCTTATTTTGGTCTGAAAAGTGCTATCATACCTCTTTTGAGTTTTGTTGGTTGCATCCAGATATACTGTCTATGGTGTGTCGTGAAACTACAAAACTTTTTCAAATTTTTATATGTGGCTAGGATATGTCTCAACATTGATATGACTTTTATAAATGTAACGTTTTTCAATTGAATTTTAGGGTGTACACCTTGGACGTTATAGTGGCAACGAGGATTCTTTCATAATTTTTTTTCTTTCCTTTTTTTGTTGTACCTTTGATCAAGTTTTATTGAGAAGTCCGAGGTTTTGTTTTCTGTGTGTAGATTTGACTAAAGTTGACTACTTTCAACTAAAGTTTATCAAAAGCTAATTAATTCAAAACTTATTTTTTTAAAAAAAGTTCACTTTCATAGCCATAAGTTCTATAGAAAGATTTATATAGTAAAATTCAAACAATTATTATAATTATTAAAATAATTGAAAAAGATTAAATAGCATAGCTTAATATTACAACTATAAATACTATATTATAACCTAATATTTCAACCATAAATATTATATTACAGTGTTGAAAAGAAGCTATTATATGTTAAAGATAGTATATTATT

Coding sequence (CDS)

ATGGAGATTAAGCTGAAATGTAACTGTGGCGAAACCAAATGCTTGGAATGGGCCGTCGTTGAGTTACAAGGCGTGGTTGAACCTCAATCCACCTTCCAAGATCGCCTTCAAAACCTCGAAATCGGCATTCTATGTCGACCCTCCGCTCAGGAAGTGTATACTTTTACAGTAGGGTACCATGAGCTGACAGGAAGCAAAATTTCTTTGAAGAAGCCATTGTTGGTGTTGAAGAAAACGAGGTCTGTGGATGAGGATCAGAGTAGCGATACTAAATCGGGTAATGCAGAGTTGGAAGTGATTGGGATCATTAGGCAGCGGATTCTGTTTAAGACCAGACCAAAGGCACTCATATCCAAACCACAGCCATTGGTTAAGGAAAGATCCCGTGCTTCAGGATCTGCAGTGACAGGCCAAACAACATGA

Protein sequence

MEIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKISLKKPLLVLKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALISKPQPLVKERSRASGSAVTGQTT*
Homology
[Close]
BLAST of CsGy5G005720 vs. ExPASy Swiss-Prot
Match: Q54JL4 (Putative uncharacterized protein DDB_G0287975 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0287975 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08
Identity = 38/117 (32.48%), Postives = 62/117 (52.99%), Query Frame = 0 

Query: 16  EWAVVELQGVVEPQSTFQDRLQNLEIGILC-RPSAQEVYTFTVGYHELTGSKISLKKPLL 75
           EW +++LQG +E    +   L+N  +GIL  +P+ ++ ++F +G   L G ++ LKKPLL
Sbjct: 13  EWFILDLQGHLE----YTGDLKNETLGILTKKPNTKDDFSFQIGNSVLVGKRVPLKKPLL 72

Query: 76  VLKKTR-------------SVD-EDQSSDTKSGNAELEVIGIIRQRILFKTRPKALI 118
           V+KK++             +VD +D   + K    E  + GI   +I F TRP   I
Sbjct: 73  VIKKSKLNNNNNSNNNNKMAVDNKDNKDNEKDKEVEYSIEGICNDKIQFTTRPTTFI 125

[Close]
BLAST of CsGy5G005720 vs. ExPASy Swiss-Prot
Match: P0CG13 (Chromosome transmission fidelity protein 8 homolog OS=Homo sapiens OX=9606 GN=CHTF8 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.6e-07
Identity = 35/103 (33.98%), Postives = 53/103 (51.46%), Query Frame = 0 

Query: 16  EWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKISLKKPLLV 75
           EW ++ELQG +E  + +   L    +G L   + + +    VG+H L G  I L+KP  V
Sbjct: 16  EWVLMELQGEIE--ARYSTGLAGNLLGDL-HYTTEGIPVLIVGHHILYGKIIHLEKPFAV 75

Query: 76  LKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALIS 119
           L K    D+D     +       V  +I+ +ILFKTRPK +I+
Sbjct: 76  LVKHTPGDQDCDELGRETGTRYLVTALIKDKILFKTRPKPIIT 115

[Close]
BLAST of CsGy5G005720 vs. ExPASy Swiss-Prot
Match: P0CG15 (Chromosome transmission fidelity protein 8 homolog OS=Mus musculus OX=10090 GN=Chtf8 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.6e-07
Identity = 34/103 (33.01%), Postives = 53/103 (51.46%), Query Frame = 0 

Query: 16  EWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKISLKKPLLV 75
           EW ++ELQG +E  + +   L    +G L   + + +    VG+H L G  I L+KP  V
Sbjct: 16  EWVLMELQGEIE--ARYSTGLAGNLLGDL-HYTTEGIPVLIVGHHILYGKTIHLEKPFAV 75

Query: 76  LKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALIS 119
           L K     +D     +    +  V  +I+ +ILFKTRPK +I+
Sbjct: 76  LVKHTPGKQDCDEPGRGTGTQYLVTALIKNKILFKTRPKPIIT 115

[Close]
BLAST of CsGy5G005720 vs. ExPASy Swiss-Prot
Match: P0C6T1 (Chromosome transmission fidelity protein 8 homolog OS=Rattus norvegicus OX=10116 GN=Chtf8 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.9e-06
Identity = 34/103 (33.01%), Postives = 53/103 (51.46%), Query Frame = 0 

Query: 16  EWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKISLKKPLLV 75
           EW ++ELQG +E  + +   L    +G L   + + +    VG+H L G  I L+KP  V
Sbjct: 16  EWVLMELQGEIE--ARYSTGLAGNLLGDL-HYTTEGIPVLIVGHHILYGKIIHLEKPFAV 75

Query: 76  LKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALIS 119
           L K     +D     +    +  V  +I+ +ILFKTRPK +I+
Sbjct: 76  LVKHTPGKQDCDELGRETGTQYLVTALIKNKILFKTRPKPIIT 115

[Close]
BLAST of CsGy5G005720 vs. ExPASy Swiss-Prot
Match: Q65ZA6 (Chromosome transmission fidelity protein 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ctf8 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 6.4e-06
Identity = 37/93 (39.78%), Postives = 52/93 (55.91%), Query Frame = 0 

Query: 25  VVEPQSTFQDRLQNLEIG----ILCRPSAQEVYTFTVGYHELTGSKISLKKPLLVLKKTR 84
           +VE Q+T + +  +L IG    I  + S ++  T TVG   + G   SLKKPL VL+KT 
Sbjct: 16  LVEVQATLERKADSLHIGDLKIIKEKNSEKKKATLTVGNQYMEGVVESLKKPLAVLQKTN 75

Query: 85  SVDEDQSSDTKSGNAELEVIGIIRQRILFKTRP 114
           +   D  S   S + EL+   IIR+RI F +RP
Sbjct: 76  ADPVDVYS---SPSHELKCCSIIRERIRFSSRP 105

[Close]
BLAST of CsGy5G005720 vs. NCBI nr
Match: XP_004143632.1 (putative uncharacterized protein DDB_G0287975 isoform X1 [Cucumis sativus] >KGN50412.1 hypothetical protein Csa_000393 [Cucumis sativus])

HSP 1 Score: 278 bits (711), Expect = 3.13e-94
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0 

Query: 1   MEIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60
           MEIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH
Sbjct: 1   MEIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60

Query: 61  ELTGSKISLKKPLLVLKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSKISLKKPLLVLKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKISLKKPLLVLKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRASGSAVTGQTT 140
           QPLVKERSRASGSAVTGQTT
Sbjct: 121 QPLVKERSRASGSAVTGQTT 140

[Close]
BLAST of CsGy5G005720 vs. NCBI nr
Match: XP_038906846.1 (putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906847.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906848.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906849.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906850.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida])

HSP 1 Score: 268 bits (685), Expect = 2.89e-90
Identity = 134/140 (95.71%), Postives = 136/140 (97.14%), Query Frame = 0 

Query: 1   MEIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60
           M+IKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH
Sbjct: 1   MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60

Query: 61  ELTGSKISLKKPLLVLKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSK+ LKKPLLVLKK RSVDEDQSSD KS NAELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKVPLKKPLLVLKKMRSVDEDQSSDAKSANAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRASGSAVTGQTT 140
           QPLVKERSRASGSAVTGQTT
Sbjct: 121 QPLVKERSRASGSAVTGQTT 140

[Close]
BLAST of CsGy5G005720 vs. NCBI nr
Match: KAA0055164.1 (hypothetical protein E6C27_scaffold231G00960 [Cucumis melo var. makuwa])

HSP 1 Score: 268 bits (684), Expect = 4.11e-90
Identity = 132/140 (94.29%), Postives = 138/140 (98.57%), Query Frame = 0 

Query: 1   MEIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60
           M+IKLKCNCGETKCLEWA+VELQGVVEPQSTFQDR+QNLEIGILCRPSAQE+YTFTVGYH
Sbjct: 1   MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60

Query: 61  ELTGSKISLKKPLLVLKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSK+SLKKPLLVLKKTRSVDEDQSSD KSGNAELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRASGSAVTGQTT 140
           +PLVKERSRASGSAV GQTT
Sbjct: 121 EPLVKERSRASGSAVKGQTT 140

[Close]
BLAST of CsGy5G005720 vs. NCBI nr
Match: XP_008467231.1 (PREDICTED: putative uncharacterized protein DDB_G0287975 [Cucumis melo] >TYK00299.1 hypothetical protein E5676_scaffold1728G00430 [Cucumis melo var. makuwa])

HSP 1 Score: 265 bits (678), Expect = 3.38e-89
Identity = 132/140 (94.29%), Postives = 137/140 (97.86%), Query Frame = 0 

Query: 1   MEIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60
           M+IKLKCNCGETKCLEWAVVELQGVVE QSTFQDR+QNLEIGILCRPSAQE+YTFTVGYH
Sbjct: 1   MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60

Query: 61  ELTGSKISLKKPLLVLKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSK+SLKKPLLVLKKTRSVDEDQSSD KSGNAELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRASGSAVTGQTT 140
           +PLVKERSRASGSAV GQTT
Sbjct: 121 EPLVKERSRASGSAVKGQTT 140

[Close]
BLAST of CsGy5G005720 vs. NCBI nr
Match: XP_023551664.1 (putative uncharacterized protein DDB_G0287975 [Cucurbita pepo subsp. pepo] >KAG7017126.1 hypothetical protein SDJN02_22238 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 247 bits (630), Expect = 7.06e-82
Identity = 121/140 (86.43%), Postives = 129/140 (92.14%), Query Frame = 0 

Query: 1   MEIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60
           M+IK+KCNCGETKCLEWAVVELQG+VE Q +F+DRLQ LEIG+LCRPSAQEVYTFTVGYH
Sbjct: 1   MQIKVKCNCGETKCLEWAVVELQGIVEAQPSFEDRLQTLEIGVLCRPSAQEVYTFTVGYH 60

Query: 61  ELTGSKISLKKPLLVLKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSK+ LKKPLLVLKK + VDEDQS DTKS  AELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKVPLKKPLLVLKKKKCVDEDQSGDTKSATAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRASGSAVTGQTT 140
           QP VKERSRASGSAVTGQ T
Sbjct: 121 QPSVKERSRASGSAVTGQAT 140

[Close]
BLAST of CsGy5G005720 vs. ExPASy TrEMBL
Match: A0A0A0KPT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172910 PE=4 SV=1)

HSP 1 Score: 278 bits (711), Expect = 1.52e-94
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0 

Query: 1   MEIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60
           MEIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH
Sbjct: 1   MEIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60

Query: 61  ELTGSKISLKKPLLVLKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSKISLKKPLLVLKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKISLKKPLLVLKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRASGSAVTGQTT 140
           QPLVKERSRASGSAVTGQTT
Sbjct: 121 QPLVKERSRASGSAVTGQTT 140

[Close]
BLAST of CsGy5G005720 vs. ExPASy TrEMBL
Match: A0A5A7UJ36 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00960 PE=4 SV=1)

HSP 1 Score: 268 bits (684), Expect = 1.99e-90
Identity = 132/140 (94.29%), Postives = 138/140 (98.57%), Query Frame = 0 

Query: 1   MEIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60
           M+IKLKCNCGETKCLEWA+VELQGVVEPQSTFQDR+QNLEIGILCRPSAQE+YTFTVGYH
Sbjct: 1   MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60

Query: 61  ELTGSKISLKKPLLVLKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSK+SLKKPLLVLKKTRSVDEDQSSD KSGNAELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRASGSAVTGQTT 140
           +PLVKERSRASGSAV GQTT
Sbjct: 121 EPLVKERSRASGSAVKGQTT 140

[Close]
BLAST of CsGy5G005720 vs. ExPASy TrEMBL
Match: A0A5D3BQB7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00430 PE=4 SV=1)

HSP 1 Score: 265 bits (678), Expect = 1.64e-89
Identity = 132/140 (94.29%), Postives = 137/140 (97.86%), Query Frame = 0 

Query: 1   MEIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60
           M+IKLKCNCGETKCLEWAVVELQGVVE QSTFQDR+QNLEIGILCRPSAQE+YTFTVGYH
Sbjct: 1   MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60

Query: 61  ELTGSKISLKKPLLVLKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSK+SLKKPLLVLKKTRSVDEDQSSD KSGNAELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRASGSAVTGQTT 140
           +PLVKERSRASGSAV GQTT
Sbjct: 121 EPLVKERSRASGSAVKGQTT 140

[Close]
BLAST of CsGy5G005720 vs. ExPASy TrEMBL
Match: A0A1S3CT18 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103504632 PE=4 SV=1)

HSP 1 Score: 265 bits (678), Expect = 1.64e-89
Identity = 132/140 (94.29%), Postives = 137/140 (97.86%), Query Frame = 0 

Query: 1   MEIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60
           M+IKLKCNCGETKCLEWAVVELQGVVE QSTFQDR+QNLEIGILCRPSAQE+YTFTVGYH
Sbjct: 1   MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60

Query: 61  ELTGSKISLKKPLLVLKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSK+SLKKPLLVLKKTRSVDEDQSSD KSGNAELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRASGSAVTGQTT 140
           +PLVKERSRASGSAV GQTT
Sbjct: 121 EPLVKERSRASGSAVKGQTT 140

[Close]
BLAST of CsGy5G005720 vs. ExPASy TrEMBL
Match: A0A6J1I4S6 (Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111469152 PE=4 SV=1)

HSP 1 Score: 246 bits (627), Expect = 9.79e-82
Identity = 120/140 (85.71%), Postives = 128/140 (91.43%), Query Frame = 0 

Query: 1   MEIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60
           M+IK+KCNCGETKCLEWAVVELQG+VE Q +F+DR Q LEIG+LCRPSAQEVYTFTVGYH
Sbjct: 1   MQIKVKCNCGETKCLEWAVVELQGIVEAQPSFEDRFQTLEIGVLCRPSAQEVYTFTVGYH 60

Query: 61  ELTGSKISLKKPLLVLKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSK+ LKKPLLVLKK + VDEDQS DTKS  AELEVIGIIRQR LFKTRPKALISKP
Sbjct: 61  ELTGSKVPLKKPLLVLKKKKCVDEDQSGDTKSATAELEVIGIIRQRFLFKTRPKALISKP 120

Query: 121 QPLVKERSRASGSAVTGQTT 140
           QP VKERSRASGSAVTGQTT
Sbjct: 121 QPSVKERSRASGSAVTGQTT 140

[Close]
BLAST of CsGy5G005720 vs. TAIR 10
Match: AT5G52220.1 (CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607); Has 127 Blast hits to 127 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 70; Fungi - 17; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 149.4 bits (376), Expect = 2.1e-36
Identity = 79/120 (65.83%), Postives = 92/120 (76.67%), Query Frame = 0 

Query: 1   MEIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCR-PSAQEVYTFTVGY 60
           MEI++KC CGE +C EWA+VELQGVVE Q++FQ  +QNLEIG LC   S+Q  YTFTVGY
Sbjct: 1   MEIRVKCRCGEEECSEWAIVELQGVVETQASFQGSIQNLEIGRLCHSDSSQGTYTFTVGY 60

Query: 61  HELTGSKISLKKPLLVLKKTRSVDEDQSSDTKSGNA-ELEVIGIIRQRILFKTRPKALIS 119
           HEL GSK++LKKPLLVLKK +        D  SG A ELEV+GIIR +ILFKTRPK LIS
Sbjct: 61  HELVGSKVTLKKPLLVLKKLQ-------FDEVSGKATELEVVGIIRTKILFKTRPKPLIS 113

[Close]
BLAST of CsGy5G005720 vs. TAIR 10
Match: AT5G52220.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607). )

HSP 1 Score: 149.4 bits (376), Expect = 2.1e-36
Identity = 79/120 (65.83%), Postives = 92/120 (76.67%), Query Frame = 0 

Query: 1   MEIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCR-PSAQEVYTFTVGY 60
           MEI++KC CGE +C EWA+VELQGVVE Q++FQ  +QNLEIG LC   S+Q  YTFTVGY
Sbjct: 1   MEIRVKCRCGEEECSEWAIVELQGVVETQASFQGSIQNLEIGRLCHSDSSQGTYTFTVGY 60

Query: 61  HELTGSKISLKKPLLVLKKTRSVDEDQSSDTKSGNA-ELEVIGIIRQRILFKTRPKALIS 119
           HEL GSK++LKKPLLVLKK +        D  SG A ELEV+GIIR +ILFKTRPK LIS
Sbjct: 61  HELVGSKVTLKKPLLVLKKLQ-------FDEVSGKATELEVVGIIRTKILFKTRPKPLIS 113

The following BLAST results are available for this feature:
BLAST of CsGy5G005720 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q54JL41.4e-0832.48Putative uncharacterized protein DDB_G0287975 OS=Dictyostelium discoideum OX=446... [more]
P0CG137.6e-0733.98Chromosome transmission fidelity protein 8 homolog OS=Homo sapiens OX=9606 GN=CH... [more]
P0CG157.6e-0733.01Chromosome transmission fidelity protein 8 homolog OS=Mus musculus OX=10090 GN=C... [more]
P0C6T12.9e-0633.01Chromosome transmission fidelity protein 8 homolog OS=Rattus norvegicus OX=10116... [more]
Q65ZA66.4e-0639.78Chromosome transmission fidelity protein 8 OS=Schizosaccharomyces pombe (strain ... [more]
BLAST of CsGy5G005720 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004143632.13.13e-94100.00putative uncharacterized protein DDB_G0287975 isoform X1 [Cucumis sativus] >KGN5... [more]
XP_038906846.12.89e-9095.71putative uncharacterized protein DDB_G0287975 [Benincasa hispida] >XP_038906847.... [more]
KAA0055164.14.11e-9094.29hypothetical protein E6C27_scaffold231G00960 [Cucumis melo var. makuwa][more]
XP_008467231.13.38e-8994.29PREDICTED: putative uncharacterized protein DDB_G0287975 [Cucumis melo] >TYK0029... [more]
XP_023551664.17.06e-8286.43putative uncharacterized protein DDB_G0287975 [Cucurbita pepo subsp. pepo] >KAG7... [more]
BLAST of CsGy5G005720 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPT41.52e-94100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172910 PE=4 SV=1[more]
A0A5A7UJ361.99e-9094.29Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BQB71.64e-8994.29Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CT181.64e-8994.29Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103504632 PE=4 SV=1[more]
A0A6J1I4S69.79e-8285.71Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111469152 PE=4 SV=1[more]
BLAST of CsGy5G005720 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G52220.12.1e-3665.83CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro... [more]
AT5G52220.22.1e-3665.83FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018607Chromosome transmission fidelity protein 8PFAMPF09696Ctf8coord: 48..114
e-value: 2.7E-10
score: 40.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..140
NoneNo IPR availablePANTHERPTHR47475CHROMOSOME TRANSMISSION FIDELITY PROTEIN 8coord: 1..132

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G005720.1CsGy5G005720.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007064 mitotic sister chromatid cohesion
cellular_component GO:0031390 Ctf18 RFC-like complex