CsGy5G005470 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G005470
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	CDGSH iron-sulfur domain-containing protein NEET
Location	Gy14Chr5: 3550816 .. 3551670 (+)
RNA-Seq Expression	CsGy5G005470
Synteny	CsGy5G005470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAAAAGCGTATGGTCTCCACACGTTCATCACCCCCTCCCTCCATTTCGATACTTCACCACATATCTGAGTTTACTATTTGCATACTATGGCATCCATTCTACCCATTTCTTCACCTTCTTCTTCCCTATCAACAAGACCCCATCTTCTCTCTCGTAATTTCAACGACAATGGACGACGTCGTACTGTTGTCGTAAGAGCTGAAGGTGGCAGCAGCGGCGAACATATAAACCCTGCAATCAGAAAGAGTGAAGACAAAGTGGTGGACTCTGTGCTCGTTCCTGAACTTTCCAAGCCTCTCACTCCTTATTGCAGGTTCTTTTGATCTCATTCTTTTCCTTTTATTCCTCATTCTCACATGCTTAATTTTGCAAAATGGGAGGAATTATAAATTTTGATCACCTGCATTGTATTATATTTGTTAGTATTTTAAACATGATTGCTATAACGACTGAAATGGAACCTCTTTAAAAGATATATGAGATGTGGTTTGGGTGCAGATGTTGGAGGTCAGGGACATTTCCTCTTTGTGATGGAAGCCATGTTAAGCACAACAAAGCAACTGGAGATAACGTTGGTCCTTTGCTCTTAAAGAAGTAGTAGACATTACACACATTCTCATGCTTTTCTTTTATTTCTTTTTCATTCTCCAACCTCTTTATCTCTTCCTGCCTAGCTTCTGTTGAGAACACATTTGAGTTTGTTTCTTAAAATAGTTAAAAACACTTTTTTCTAGTGGAAAAAGACTACCGTTGATTTTTCAGTCGTTGTTCATGAATCGTATTTAATTGTGATACTAAATATTAAATTGATTGAATTAGCATAAATAAAAAATAAAAGTATGTTTGCAAGTGA

mRNA sequence

TTTAAAAGCGTATGGTCTCCACACGTTCATCACCCCCTCCCTCCATTTCGATACTTCACCACATATCTGAGTTTACTATTTGCATACTATGGCATCCATTCTACCCATTTCTTCACCTTCTTCTTCCCTATCAACAAGACCCCATCTTCTCTCTCGTAATTTCAACGACAATGGACGACGTCGTACTGTTGTCGTAAGAGCTGAAGGTGGCAGCAGCGGCGAACATATAAACCCTGCAATCAGAAAGAGTGAAGACAAAGTGGTGGACTCTGTGCTCGTTCCTGAACTTTCCAAGCCTCTCACTCCTTATTGCAGATGTTGGAGGTCAGGGACATTTCCTCTTTGTGATGGAAGCCATGTTAAGCACAACAAAGCAACTGGAGATAACGTTGGTCCTTTGCTCTTAAAGAAGTAGTAGACATTACACACATTCTCATGCTTTTCTTTTATTTCTTTTTCATTCTCCAACCTCTTTATCTCTTCCTGCCTAGCTTCTGTTGAGAACACATTTGAGTTTGTTTCTTAAAATAGTTAAAAACACTTTTTTCTAGTGGAAAAAGACTACCGTTGATTTTTCAGTCGTTGTTCATGAATCGTATTTAATTGTGATACTAAATATTAAATTGATTGAATTAGCATAAATAAAAAATAAAAGTATGTTTGCAAGTGA

Coding sequence (CDS)

ATGGCATCCATTCTACCCATTTCTTCACCTTCTTCTTCCCTATCAACAAGACCCCATCTTCTCTCTCGTAATTTCAACGACAATGGACGACGTCGTACTGTTGTCGTAAGAGCTGAAGGTGGCAGCAGCGGCGAACATATAAACCCTGCAATCAGAAAGAGTGAAGACAAAGTGGTGGACTCTGTGCTCGTTCCTGAACTTTCCAAGCCTCTCACTCCTTATTGCAGATGTTGGAGGTCAGGGACATTTCCTCTTTGTGATGGAAGCCATGTTAAGCACAACAAAGCAACTGGAGATAACGTTGGTCCTTTGCTCTTAAAGAAGTAG

Protein sequence

MASILPISSPSSSLSTRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK*

Homology

[Close]

BLAST of CsGy5G005470 vs. ExPASy Swiss-Prot
Match: Q9FLI7 (CDGSH iron-sulfur domain-containing protein NEET OS=Arabidopsis thaliana OX=3702 GN=NEET PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.6e-31
Identity = 64/79 (81.01%), Postives = 69/79 (87.34%), Query Frame = 0


Query: 30  RRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGS 89
           ++R VVVRAEGG     INP IRK+EDKVVDSV+V ELSK +TPYCRCWRSGTFPLCDGS
Sbjct: 32  QQRMVVVRAEGGGG---INPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGS 91

Query: 90  HVKHNKATGDNVGPLLLKK 109
           HVKHNKA GDNVGPLLLKK
Sbjct: 92  HVKHNKANGDNVGPLLLKK 107

[Close]

BLAST of CsGy5G005470 vs. ExPASy Swiss-Prot
Match: Q7T326 (CDGSH iron-sulfur domain-containing protein 2 OS=Danio rerio OX=7955 GN=cisd2 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 4.8e-17
Identity = 37/62 (59.68%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 47  INPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 106
           IN  I+K   KVV+ + + +L  P   YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+L
Sbjct: 71  INLKIQKENPKVVNEIDIEDLRTPNVCYCRCWRSKTFPVCDKSHIKHNELTGDNVGPLIL 130

Query: 107 KK 109
           KK
Sbjct: 131 KK 132

[Close]

BLAST of CsGy5G005470 vs. ExPASy Swiss-Prot
Match: C1BI29 (CDGSH iron-sulfur domain-containing protein 2A OS=Oncorhynchus mykiss OX=8022 GN=cisd2a PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.1e-16
Identity = 36/62 (58.06%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 47  INPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 106
           IN  I+K   KVV+ + + +L++    YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+L
Sbjct: 71  INLEIQKENPKVVNEIDIEDLNRTNVCYCRCWRSKTFPVCDKSHIKHNELTGDNVGPLIL 130

Query: 107 KK 109
           KK
Sbjct: 131 KK 132

[Close]

BLAST of CsGy5G005470 vs. ExPASy Swiss-Prot
Match: Q6PCF8 (CDGSH iron-sulfur domain-containing protein 2A OS=Xenopus laevis OX=8355 GN=cisd2-a PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.1e-16
Identity = 37/62 (59.68%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 47  INPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 106
           IN  I+K   KVV+ + + +L      YCRCWRS TFP+CDGSH KHN+ TGDNVGPL+L
Sbjct: 71  INLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLIL 130

Query: 107 KK 109
           KK
Sbjct: 131 KK 132

[Close]

BLAST of CsGy5G005470 vs. ExPASy Swiss-Prot
Match: Q6AZG1 (CDGSH iron-sulfur domain-containing protein 2B OS=Xenopus laevis OX=8355 GN=cisd2-b PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.1e-16
Identity = 37/62 (59.68%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 47  INPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLL 106
           IN  I+K   KVV+ + + +L      YCRCWRS TFP+CDGSH KHN+ TGDNVGPL+L
Sbjct: 71  INLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLIL 130

Query: 107 KK 109
           KK
Sbjct: 131 KK 132

[Close]

BLAST of CsGy5G005470 vs. NCBI nr
Match: XP_004143713.1 (CDGSH iron-sulfur domain-containing protein NEET [Cucumis sativus] >KGN50388.1 hypothetical protein Csa_000068 [Cucumis sativus])

HSP 1 Score: 223 bits (568), Expect = 1.89e-73
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MASILPISSPSSSLSTRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVD 60
           MASILPISSPSSSLSTRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVD
Sbjct: 1   MASILPISSPSSSLSTRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVD 60

Query: 61  SVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108
           SVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
Sbjct: 61  SVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108

[Close]

BLAST of CsGy5G005470 vs. NCBI nr
Match: XP_008467263.1 (PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Cucumis melo] >KAA0055137.1 CDGSH iron-sulfur domain-containing protein NEET [Cucumis melo var. makuwa])

HSP 1 Score: 191 bits (486), Expect = 6.10e-61
Identity = 98/109 (89.91%), Postives = 102/109 (93.58%), Query Frame = 0


Query: 1   MASILPISSPSSSLSTRPHLL-SRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVV 60
           MASI+ ISSPSSSLSTR  LL  R+FNDNGRRRTVVVRAEG SSGEHINPAIRKSE+KVV
Sbjct: 1   MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAEG-SSGEHINPAIRKSEEKVV 60

Query: 61  DSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108
           DSVL+ ELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
Sbjct: 61  DSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108

[Close]

BLAST of CsGy5G005470 vs. NCBI nr
Match: XP_038876467.1 (CDGSH iron-sulfur domain-containing protein NEET [Benincasa hispida])

HSP 1 Score: 160 bits (404), Expect = 1.82e-48
Identity = 84/109 (77.06%), Postives = 93/109 (85.32%), Query Frame = 0


Query: 1   MASILPISSPSS-SLSTRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVV 60
           MASI+ IS PSS S+++RP     NF  +GRR TVVVRA+G S GE INPAIRK+EDKVV
Sbjct: 1   MASIVAISLPSSLSITSRPP--HSNFIGSGRRSTVVVRAQG-SGGEPINPAIRKTEDKVV 60

Query: 61  DSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108
           DSVL+ ELSKPLTPYCRCWRS TFPLCDGSHVKHNKATGDNVGPLLLK+
Sbjct: 61  DSVLIAELSKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKQ 106

[Close]

BLAST of CsGy5G005470 vs. NCBI nr
Match: XP_023534172.1 (CDGSH iron-sulfur domain-containing protein NEET [Cucurbita pepo subsp. pepo])

HSP 1 Score: 146 bits (369), Expect = 3.59e-43
Identity = 72/94 (76.60%), Postives = 78/94 (82.98%), Query Frame = 0


Query: 15  STRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPY 74
           +TRP  ++       RRR VVVRAEGG   E INPAIRKSEDKVVDSV+V +L+KPLTPY
Sbjct: 12  TTRPPHVNFTLGGMPRRRMVVVRAEGG---EAINPAIRKSEDKVVDSVVVADLAKPLTPY 71

Query: 75  CRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108
           CRCWRS TFPLCDGSHVKHNKATGDNVGPLLLKK
Sbjct: 72  CRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKK 102

[Close]

BLAST of CsGy5G005470 vs. NCBI nr
Match: XP_022996357.1 (CDGSH iron-sulfur domain-containing protein NEET [Cucurbita maxima])

HSP 1 Score: 145 bits (365), Expect = 1.46e-42
Identity = 72/87 (82.76%), Postives = 75/87 (86.21%), Query Frame = 0


Query: 24  NFNDNG--RRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSG 83
           NF   G  RRR VVVRAEGG   E INPAIRKSEDKVVDSV+V +L+KPLTPYCRCWRS 
Sbjct: 19  NFTVGGMPRRRMVVVRAEGG---EAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSA 78

Query: 84  TFPLCDGSHVKHNKATGDNVGPLLLKK 108
           TFPLCDGSHVKHNKATGDNVGPLLLKK
Sbjct: 79  TFPLCDGSHVKHNKATGDNVGPLLLKK 102

[Close]

BLAST of CsGy5G005470 vs. ExPASy TrEMBL
Match: A0A0A0KL88 (ZnF_CDGSH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G171700 PE=4 SV=1)

HSP 1 Score: 223 bits (568), Expect = 9.14e-74
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MASILPISSPSSSLSTRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVD 60
           MASILPISSPSSSLSTRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVD
Sbjct: 1   MASILPISSPSSSLSTRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVD 60

Query: 61  SVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108
           SVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
Sbjct: 61  SVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108

[Close]

BLAST of CsGy5G005470 vs. ExPASy TrEMBL
Match: A0A5A7UKN7 (CDGSH iron-sulfur domain-containing protein NEET OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00670 PE=4 SV=1)

HSP 1 Score: 191 bits (486), Expect = 2.95e-61
Identity = 98/109 (89.91%), Postives = 102/109 (93.58%), Query Frame = 0


Query: 1   MASILPISSPSSSLSTRPHLL-SRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVV 60
           MASI+ ISSPSSSLSTR  LL  R+FNDNGRRRTVVVRAEG SSGEHINPAIRKSE+KVV
Sbjct: 1   MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAEG-SSGEHINPAIRKSEEKVV 60

Query: 61  DSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108
           DSVL+ ELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
Sbjct: 61  DSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108

[Close]

BLAST of CsGy5G005470 vs. ExPASy TrEMBL
Match: A0A1S3CTC1 (CDGSH iron-sulfur domain-containing protein NEET OS=Cucumis melo OX=3656 GN=LOC103504660 PE=4 SV=1)

HSP 1 Score: 191 bits (486), Expect = 2.95e-61
Identity = 98/109 (89.91%), Postives = 102/109 (93.58%), Query Frame = 0


Query: 1   MASILPISSPSSSLSTRPHLL-SRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVV 60
           MASI+ ISSPSSSLSTR  LL  R+FNDNGRRRTVVVRAEG SSGEHINPAIRKSE+KVV
Sbjct: 1   MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAEG-SSGEHINPAIRKSEEKVV 60

Query: 61  DSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108
           DSVL+ ELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
Sbjct: 61  DSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108

[Close]

BLAST of CsGy5G005470 vs. ExPASy TrEMBL
Match: A0A6J1K1P5 (CDGSH iron-sulfur domain-containing protein NEET OS=Cucurbita maxima OX=3661 GN=LOC111491613 PE=4 SV=1)

HSP 1 Score: 145 bits (365), Expect = 7.07e-43
Identity = 72/87 (82.76%), Postives = 75/87 (86.21%), Query Frame = 0


Query: 24  NFNDNG--RRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSG 83
           NF   G  RRR VVVRAEGG   E INPAIRKSEDKVVDSV+V +L+KPLTPYCRCWRS 
Sbjct: 19  NFTVGGMPRRRMVVVRAEGG---EAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSA 78

Query: 84  TFPLCDGSHVKHNKATGDNVGPLLLKK 108
           TFPLCDGSHVKHNKATGDNVGPLLLKK
Sbjct: 79  TFPLCDGSHVKHNKATGDNVGPLLLKK 102

[Close]

BLAST of CsGy5G005470 vs. ExPASy TrEMBL
Match: W9S1F7 (CDGSH iron-sulfur domain-containing protein 2A OS=Morus notabilis OX=981085 GN=L484_012960 PE=4 SV=1)

HSP 1 Score: 144 bits (364), Expect = 1.54e-42
Identity = 70/90 (77.78%), Postives = 74/90 (82.22%), Query Frame = 0


Query: 19  HLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCW 78
           H  + NF     RR VVVRAEG    + INP IRKSE+KVVDSV+V ELSKPLTPYCRCW
Sbjct: 31  HKPTTNFKSRSSRRLVVVRAEG----QAINPEIRKSEEKVVDSVVVTELSKPLTPYCRCW 90

Query: 79  RSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108
           RSGTFPLCDGSHVKHNKATGDNVGPLLLKK
Sbjct: 91  RSGTFPLCDGSHVKHNKATGDNVGPLLLKK 116

[Close]

BLAST of CsGy5G005470 vs. TAIR 10
Match: AT5G51720.1 (2 iron, 2 sulfur cluster binding )

HSP 1 Score: 136.0 bits (341), Expect = 1.9e-32
Identity = 64/79 (81.01%), Postives = 69/79 (87.34%), Query Frame = 0


Query: 30  RRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGS 89
           ++R VVVRAEGG     INP IRK+EDKVVDSV+V ELSK +TPYCRCWRSGTFPLCDGS
Sbjct: 32  QQRMVVVRAEGGGG---INPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGS 91

Query: 90  HVKHNKATGDNVGPLLLKK 109
           HVKHNKA GDNVGPLLLKK
Sbjct: 92  HVKHNKANGDNVGPLLLKK 107

The following BLAST results are available for this feature:

BLAST of CsGy5G005470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLI7	2.6e-31	81.01	CDGSH iron-sulfur domain-containing protein NEET OS=Arabidopsis thaliana OX=3702...	[more]
Q7T326	4.8e-17	59.68	CDGSH iron-sulfur domain-containing protein 2 OS=Danio rerio OX=7955 GN=cisd2 PE...	[more]
C1BI29	1.1e-16	58.06	CDGSH iron-sulfur domain-containing protein 2A OS=Oncorhynchus mykiss OX=8022 GN...	[more]
Q6PCF8	1.1e-16	59.68	CDGSH iron-sulfur domain-containing protein 2A OS=Xenopus laevis OX=8355 GN=cisd...	[more]
Q6AZG1	1.1e-16	59.68	CDGSH iron-sulfur domain-containing protein 2B OS=Xenopus laevis OX=8355 GN=cisd...	[more]

BLAST of CsGy5G005470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143713.1	1.89e-73	100.00	CDGSH iron-sulfur domain-containing protein NEET [Cucumis sativus] >KGN50388.1 h...	[more]
XP_008467263.1	6.10e-61	89.91	PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Cucumis melo] >KAA0...	[more]
XP_038876467.1	1.82e-48	77.06	CDGSH iron-sulfur domain-containing protein NEET [Benincasa hispida]	[more]
XP_023534172.1	3.59e-43	76.60	CDGSH iron-sulfur domain-containing protein NEET [Cucurbita pepo subsp. pepo]	[more]
XP_022996357.1	1.46e-42	82.76	CDGSH iron-sulfur domain-containing protein NEET [Cucurbita maxima]	[more]

BLAST of CsGy5G005470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL88	9.14e-74	100.00	ZnF_CDGSH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G171700 P...	[more]
A0A5A7UKN7	2.95e-61	89.91	CDGSH iron-sulfur domain-containing protein NEET OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3CTC1	2.95e-61	89.91	CDGSH iron-sulfur domain-containing protein NEET OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1K1P5	7.07e-43	82.76	CDGSH iron-sulfur domain-containing protein NEET OS=Cucurbita maxima OX=3661 GN=...	[more]
W9S1F7	1.54e-42	77.78	CDGSH iron-sulfur domain-containing protein 2A OS=Morus notabilis OX=981085 GN=L...	[more]

BLAST of CsGy5G005470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G51720.1	1.9e-32	81.01	2 iron, 2 sulfur cluster binding	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018967	Iron-binding zinc finger, CDGSH type	SMART	SM00704	znf_cdgsh	coord: 57..96 e-value: 7.6E-9 score: 45.4
IPR018967	Iron-binding zinc finger, CDGSH type	PFAM	PF09360	zf-CDGSH	coord: 67..90 e-value: 3.1E-8 score: 33.7
IPR042216	MitoNEET, CDGSH iron-sulfur domain	GENE3D	3.40.5.90		coord: 63..108 e-value: 1.7E-23 score: 83.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR13680:SF5	CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1	coord: 27..108
IPR045131	CDGSH iron-sulfur domain-containing protein 1/2	PANTHER	PTHR13680	CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1	coord: 27..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G005470.1	CsGy5G005470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010506	regulation of autophagy
cellular_component	GO:0005741	mitochondrial outer membrane
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0046872	metal ion binding