CsGy5G005280 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G005280
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Protein kinase domain-containing protein
Location	Gy14Chr5: 3391853 .. 3392507 (-)
RNA-Seq Expression	CsGy5G005280
Synteny	CsGy5G005280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATAGTTTCCAGAGGCGCAATGCAGGTCTGTAAAGCTTTCATACTAAACTATTAATTACCTATTAACAAGACTGCTAAGGAAGTTGGAAACTGATAGAGCCGAATTCAGAAGTTTTCTTCATATTATTGATATAATTATTTTAGTGATATACCTGGACTCCAACATTTCCATTTATTCAATCTGTTTTCGTAGTGCTTTGAAACACATTATTCTGATGTTTATTTTAGAGTGTTGTGGTTAGATTGAATGGCAATAGAACCAGACTGGAATTTTGTGACAATGAAATTCTTATACATCAATAATCTGGTTTACTGTTAGATATTGTCATTTCAGAATTATAGTTATGCACTCATTTCTCTTGATGACCCGTAAAGTTATATATATATATATATATGTTATATACAGGCTTTGTTAAAGTTGGTGGCTGACTGTTCGGCAGTAGCCTTGAATCCAAGCAGAAAAGATGCAGCTAATGAGTGTCCTCTCAAGATAGCCTTGTTTTCCTTGGCAAAGATGTGCGCACACACACCGTGCCGACAGTTCCTTCTTTCATCAAAGCTATTTCCAGTGATCGGGCAGCTTCGGCAATCCCCAGAGTCCATAATCGCCAAATATGCTTCTGTAATTGTCAGAAAGGTTGCTGAAACTTGA

mRNA sequence

ATGTATAGTTTCCAGAGGCGCAATGCAGTAGCCTTGAATCCAAGCAGAAAAGATGCAGCTAATGAGTGTCCTCTCAAGATAGCCTTGTTTTCCTTGGCAAAGATGTGCGCACACACACCGTGCCGACAGTTCCTTCTTTCATCAAAGCTATTTCCAGTGATCGGGCAGCTTCGGCAATCCCCAGAGTCCATAATCGCCAAATATGCTTCTGTAATTGTCAGAAAGGTTGCTGAAACTTGA

Coding sequence (CDS)

ATGTATAGTTTCCAGAGGCGCAATGCAGTAGCCTTGAATCCAAGCAGAAAAGATGCAGCTAATGAGTGTCCTCTCAAGATAGCCTTGTTTTCCTTGGCAAAGATGTGCGCACACACACCGTGCCGACAGTTCCTTCTTTCATCAAAGCTATTTCCAGTGATCGGGCAGCTTCGGCAATCCCCAGAGTCCATAATCGCCAAATATGCTTCTGTAATTGTCAGAAAGGTTGCTGAAACTTGA

Protein sequence

MYSFQRRNAVALNPSRKDAANECPLKIALFSLAKMCAHTPCRQFLLSSKLFPVIGQLRQSPESIIAKYASVIVRKVAET*

Homology

[Close]

BLAST of CsGy5G005280 vs. ExPASy Swiss-Prot
Match: Q2QAV0 (Serine/threonine-protein kinase TIO OS=Arabidopsis thaliana OX=3702 GN=TIO PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.4e-18
Identity = 48/71 (67.61%), Postives = 60/71 (84.51%), Query Frame = 0


Query: 8    NAVALNPSRKDAANECPLKIALFSLAKMCA-HTPCRQFLLSSKLFPVIGQLRQSPESIIA 67
            + +ALNPS+K+ A+E PLKIALFSLAKMC+ H  CRQF+ SS+LFPVI +L+QSPE+ IA
Sbjct: 1249 STLALNPSKKETASESPLKIALFSLAKMCSNHQICRQFVKSSELFPVIARLKQSPEANIA 1308

Query: 68   KYASVIVRKVA 78
             YASVIV KV+
Sbjct: 1309 HYASVIVAKVS 1319

[Close]

BLAST of CsGy5G005280 vs. NCBI nr
Match: KAE8647938.1 (hypothetical protein Csa_000410 [Cucumis sativus])

HSP 1 Score: 138 bits (348), Expect = 2.76e-40
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 10  VALNPSRKDAANECPLKIALFSLAKMCAHTPCRQFLLSSKLFPVIGQLRQSPESIIAKYA 69
           VALNPSRKDAANECPLKIALFSLAKMCAHTPCRQFLLSSKLFPVIGQLRQSPESIIAKYA
Sbjct: 49  VALNPSRKDAANECPLKIALFSLAKMCAHTPCRQFLLSSKLFPVIGQLRQSPESIIAKYA 108

Query: 70  SVIVRKVAET 79
           SVIVRKVAET
Sbjct: 109 SVIVRKVAET 118

[Close]

BLAST of CsGy5G005280 vs. NCBI nr
Match: XP_011654867.2 (serine/threonine-protein kinase TIO [Cucumis sativus] >KGN49838.2 hypothetical protein Csa_000633 [Cucumis sativus])

HSP 1 Score: 134 bits (337), Expect = 2.56e-34
Identity = 69/72 (95.83%), Postives = 70/72 (97.22%), Query Frame = 0


Query: 8    NAVALNPSRKDAANECPLKIALFSLAKMCAHTPCRQFLLSSKLFPVIGQLRQSPESIIAK 67
            +AVALNPSRKDAANE PLKIALFSLAKMCAHTPCRQFLLSSKLFPVIGQLRQSPESIIAK
Sbjct: 1277 SAVALNPSRKDAANESPLKIALFSLAKMCAHTPCRQFLLSSKLFPVIGQLRQSPESIIAK 1336

Query: 68   YASVIVRKVAET 79
            YASVIV KVAET
Sbjct: 1337 YASVIVSKVAET 1348

[Close]

BLAST of CsGy5G005280 vs. NCBI nr
Match: XP_038874587.1 (serine/threonine-protein kinase TIO isoform X2 [Benincasa hispida] >XP_038874588.1 serine/threonine-protein kinase TIO isoform X2 [Benincasa hispida])

HSP 1 Score: 132 bits (332), Expect = 1.21e-33
Identity = 68/72 (94.44%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 8    NAVALNPSRKDAANECPLKIALFSLAKMCAHTPCRQFLLSSKLFPVIGQLRQSPESIIAK 67
            +AVALNPSRKDAANE PLKIALFSLAKMCAH PCRQFLLSSKLFPVIGQLRQSPESIIAK
Sbjct: 1276 SAVALNPSRKDAANESPLKIALFSLAKMCAHAPCRQFLLSSKLFPVIGQLRQSPESIIAK 1335

Query: 68   YASVIVRKVAET 79
            YASVIV KVAET
Sbjct: 1336 YASVIVSKVAET 1347

[Close]

BLAST of CsGy5G005280 vs. NCBI nr
Match: XP_038874586.1 (serine/threonine-protein kinase TIO isoform X1 [Benincasa hispida])

HSP 1 Score: 132 bits (332), Expect = 1.21e-33
Identity = 68/72 (94.44%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 8    NAVALNPSRKDAANECPLKIALFSLAKMCAHTPCRQFLLSSKLFPVIGQLRQSPESIIAK 67
            +AVALNPSRKDAANE PLKIALFSLAKMCAH PCRQFLLSSKLFPVIGQLRQSPESIIAK
Sbjct: 1282 SAVALNPSRKDAANESPLKIALFSLAKMCAHAPCRQFLLSSKLFPVIGQLRQSPESIIAK 1341

Query: 68   YASVIVRKVAET 79
            YASVIV KVAET
Sbjct: 1342 YASVIVSKVAET 1353

[Close]

BLAST of CsGy5G005280 vs. NCBI nr
Match: KAA0055117.1 (serine/threonine-protein kinase TIO [Cucumis melo var. makuwa] >TYK20743.1 serine/threonine-protein kinase TIO [Cucumis melo var. makuwa])

HSP 1 Score: 131 bits (329), Expect = 3.06e-33
Identity = 67/72 (93.06%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 8    NAVALNPSRKDAANECPLKIALFSLAKMCAHTPCRQFLLSSKLFPVIGQLRQSPESIIAK 67
            +AVALNPSRKDAANE PLKIALFSLAKMC+H PCRQFLLSSKLFPVIGQLRQSPESIIAK
Sbjct: 957  SAVALNPSRKDAANESPLKIALFSLAKMCSHAPCRQFLLSSKLFPVIGQLRQSPESIIAK 1016

Query: 68   YASVIVRKVAET 79
            YASVIV KVAET
Sbjct: 1017 YASVIVSKVAET 1028

[Close]

BLAST of CsGy5G005280 vs. ExPASy TrEMBL
Match: A0A0A0KRL2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G169020 PE=4 SV=1)

HSP 1 Score: 136 bits (343), Expect = 2.70e-40
Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 8  NAVALNPSRKDAANECPLKIALFSLAKMCAHTPCRQFLLSSKLFPVIGQLRQSPESIIAK 67
          +AVALNPSRKDAANE PLKIALFSLAKMCAHTPCRQFLLSSKLFPVIGQLRQSPESIIAK
Sbjct: 12 SAVALNPSRKDAANESPLKIALFSLAKMCAHTPCRQFLLSSKLFPVIGQLRQSPESIIAK 71

Query: 68 YASVIVRKVAET 79
          YASVIVRKVAET
Sbjct: 72 YASVIVRKVAET 83

[Close]

BLAST of CsGy5G005280 vs. ExPASy TrEMBL
Match: A0A0A0KKZ6 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G169060 PE=4 SV=1)

HSP 1 Score: 136 bits (343), Expect = 1.92e-35
Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 8    NAVALNPSRKDAANECPLKIALFSLAKMCAHTPCRQFLLSSKLFPVIGQLRQSPESIIAK 67
            +AVALNPSRKDAANE PLKIALFSLAKMCAHTPCRQFLLSSKLFPVIGQLRQSPESIIAK
Sbjct: 1210 SAVALNPSRKDAANESPLKIALFSLAKMCAHTPCRQFLLSSKLFPVIGQLRQSPESIIAK 1269

Query: 68   YASVIVRKVAET 79
            YASVIVRKVAET
Sbjct: 1270 YASVIVRKVAET 1281

[Close]

BLAST of CsGy5G005280 vs. ExPASy TrEMBL
Match: A0A5D3DB34 (Serine/threonine-protein kinase TIO OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G001460 PE=4 SV=1)

HSP 1 Score: 131 bits (329), Expect = 1.48e-33
Identity = 67/72 (93.06%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 8    NAVALNPSRKDAANECPLKIALFSLAKMCAHTPCRQFLLSSKLFPVIGQLRQSPESIIAK 67
            +AVALNPSRKDAANE PLKIALFSLAKMC+H PCRQFLLSSKLFPVIGQLRQSPESIIAK
Sbjct: 957  SAVALNPSRKDAANESPLKIALFSLAKMCSHAPCRQFLLSSKLFPVIGQLRQSPESIIAK 1016

Query: 68   YASVIVRKVAET 79
            YASVIV KVAET
Sbjct: 1017 YASVIVSKVAET 1028

[Close]

BLAST of CsGy5G005280 vs. ExPASy TrEMBL
Match: A0A1S3CT86 (serine/threonine-protein kinase TIO OS=Cucumis melo OX=3656 GN=LOC103504676 PE=4 SV=1)

HSP 1 Score: 131 bits (329), Expect = 1.49e-33
Identity = 67/72 (93.06%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 8    NAVALNPSRKDAANECPLKIALFSLAKMCAHTPCRQFLLSSKLFPVIGQLRQSPESIIAK 67
            +AVALNPSRKDAANE PLKIALFSLAKMC+H PCRQFLLSSKLFPVIGQLRQSPESIIAK
Sbjct: 1277 SAVALNPSRKDAANESPLKIALFSLAKMCSHAPCRQFLLSSKLFPVIGQLRQSPESIIAK 1336

Query: 68   YASVIVRKVAET 79
            YASVIV KVAET
Sbjct: 1337 YASVIVSKVAET 1348

[Close]

BLAST of CsGy5G005280 vs. ExPASy TrEMBL
Match: A0A6J1I1E7 (serine/threonine-protein kinase TIO OS=Cucurbita maxima OX=3661 GN=LOC111469005 PE=4 SV=1)

HSP 1 Score: 128 bits (321), Expect = 1.79e-32
Identity = 65/71 (91.55%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 8    NAVALNPSRKDAANECPLKIALFSLAKMCAHTPCRQFLLSSKLFPVIGQLRQSPESIIAK 67
            +AVALNPS+KDAANE PLKIALFSLAKMCAH PCRQFL+SSKLFPVIGQLRQSPESIIAK
Sbjct: 1274 SAVALNPSKKDAANESPLKIALFSLAKMCAHAPCRQFLVSSKLFPVIGQLRQSPESIIAK 1333

Query: 68   YASVIVRKVAE 78
            YASVIV KVAE
Sbjct: 1334 YASVIVSKVAE 1344

[Close]

BLAST of CsGy5G005280 vs. TAIR 10
Match: AT1G50240.2 (Protein kinase family protein with ARM repeat domain )

HSP 1 Score: 92.4 bits (228), Expect = 1.7e-19
Identity = 48/71 (67.61%), Postives = 60/71 (84.51%), Query Frame = 0


Query: 8    NAVALNPSRKDAANECPLKIALFSLAKMCA-HTPCRQFLLSSKLFPVIGQLRQSPESIIA 67
            + +ALNPS+K+ A+E PLKIALFSLAKMC+ H  CRQF+ SS+LFPVI +L+QSPE+ IA
Sbjct: 1249 STLALNPSKKETASESPLKIALFSLAKMCSNHQICRQFVKSSELFPVIARLKQSPEANIA 1308

Query: 68   KYASVIVRKVA 78
             YASVIV KV+
Sbjct: 1309 HYASVIVAKVS 1319

The following BLAST results are available for this feature:

BLAST of CsGy5G005280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QAV0	2.4e-18	67.61	Serine/threonine-protein kinase TIO OS=Arabidopsis thaliana OX=3702 GN=TIO PE=1 ...	[more]

BLAST of CsGy5G005280 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647938.1	2.76e-40	100.00	hypothetical protein Csa_000410 [Cucumis sativus]	[more]
XP_011654867.2	2.56e-34	95.83	serine/threonine-protein kinase TIO [Cucumis sativus] >KGN49838.2 hypothetical p...	[more]
XP_038874587.1	1.21e-33	94.44	serine/threonine-protein kinase TIO isoform X2 [Benincasa hispida] >XP_038874588...	[more]
XP_038874586.1	1.21e-33	94.44	serine/threonine-protein kinase TIO isoform X1 [Benincasa hispida]	[more]
KAA0055117.1	3.06e-33	93.06	serine/threonine-protein kinase TIO [Cucumis melo var. makuwa] >TYK20743.1 serin...	[more]

BLAST of CsGy5G005280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRL2	2.70e-40	97.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G169020 PE=4 SV=1	[more]
A0A0A0KKZ6	1.92e-35	97.22	Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G169...	[more]
A0A5D3DB34	1.48e-33	93.06	Serine/threonine-protein kinase TIO OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3CT86	1.49e-33	93.06	serine/threonine-protein kinase TIO OS=Cucumis melo OX=3656 GN=LOC103504676 PE=4...	[more]
A0A6J1I1E7	1.79e-32	91.55	serine/threonine-protein kinase TIO OS=Cucurbita maxima OX=3661 GN=LOC111469005 ...	[more]

BLAST of CsGy5G005280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50240.2	1.7e-19	67.61	Protein kinase family protein with ARM repeat domain	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G005280.2	CsGy5G005280.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity