CsGy5G004305 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G004305
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr5: 2868942 .. 2869331 (-)
RNA-Seq Expression	CsGy5G004305
Synteny	CsGy5G004305

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACCATATAATATTCACCAAAGAAAGAAATCCAATAGTGATCATGATTTGGCAAACTTCAAATGCCCATCACCAAAGAATAACATTCCGGTATTGCCCATAAAGCCAAACACTATTGTAGTGTTGTCACCAAGACGGGCTGCTCGAGTTGAAGTGCTAAAAGCCAAATTTGGAAGCACTATTTTGAAGGCTCAACAAAAACTTCATAATTCCAATAATGATTCTAATAAACATGAATACATCGTTGGTGCGACTCCAAATATATGCTCAATACAAGAACAAAGACAAGCTCTAAGGGAAGCTCTTGACAAGATCAATCCCGCCTTTGATTTCAATGAAAATCTCGATTCCATGAGAGAATTTGCAAAATTATTGGAGTCGGCTTGA

mRNA sequence

ATGAAACCATATAATATTCACCAAAGAAAGAAATCCAATAGTGATCATGATTTGGCAAACTTCAAATGCCCATCACCAAAGAATAACATTCCGGTATTGCCCATAAAGCCAAACACTATTGTAGTGTTGTCACCAAGACGGGCTGCTCGAGTTGAAGTGCTAAAAGCCAAATTTGGAAGCACTATTTTGAAGGCTCAACAAAAACTTCATAATTCCAATAATGATTCTAATAAACATGAATACATCGTTGGTGCGACTCCAAATATATGCTCAATACAAGAACAAAGACAAGCTCTAAGGGAAGCTCTTGACAAGATCAATCCCGCCTTTGATTTCAATGAAAATCTCGATTCCATGAGAGAATTTGCAAAATTATTGGAGTCGGCTTGA

Coding sequence (CDS)

ATGAAACCATATAATATTCACCAAAGAAAGAAATCCAATAGTGATCATGATTTGGCAAACTTCAAATGCCCATCACCAAAGAATAACATTCCGGTATTGCCCATAAAGCCAAACACTATTGTAGTGTTGTCACCAAGACGGGCTGCTCGAGTTGAAGTGCTAAAAGCCAAATTTGGAAGCACTATTTTGAAGGCTCAACAAAAACTTCATAATTCCAATAATGATTCTAATAAACATGAATACATCGTTGGTGCGACTCCAAATATATGCTCAATACAAGAACAAAGACAAGCTCTAAGGGAAGCTCTTGACAAGATCAATCCCGCCTTTGATTTCAATGAAAATCTCGATTCCATGAGAGAATTTGCAAAATTATTGGAGTCGGCTTGA

Protein sequence

MKPYNIHQRKKSNSDHDLANFKCPSPKNNIPVLPIKPNTIVVLSPRRAARVEVLKAKFGSTILKAQQKLHNSNNDSNKHEYIVGATPNICSIQEQRQALREALDKINPAFDFNENLDSMREFAKLLESA*

Homology

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BLAST of CsGy5G004305 vs. NCBI nr
Match: KGN61401.2 (hypothetical protein Csa_006690, partial [Cucumis sativus])

HSP 1 Score: 202 bits (515), Expect = 3.69e-64
Identity = 110/132 (83.33%), Postives = 120/132 (90.91%), Query Frame = 0


Query: 1   MKPYNIHQRKKSNSDHDLANFKCPSPK-NNIPVLPIKPNT-IVVLSPRRAARVEVLKAKF 60
           MKPYNI+QRK+SNSD +LANFKCPSPK NNI +LPIKPNT IVVLSPRRAARVEVLKAKF
Sbjct: 34  MKPYNIYQRKESNSDRELANFKCPSPKKNNIELLPIKPNTTIVVLSPRRAARVEVLKAKF 93

Query: 61  GSTILKAQQKLHNSNNDSNKHEYIV-GATPNICSI-QEQRQALREALDKINPAFDFNENL 120
           GSTILKAQQKL NSNNDSNK+EY+V GATP  CSI QEQ++A REALDKINP F+FNENL
Sbjct: 94  GSTILKAQQKLQNSNNDSNKYEYVVVGATPKACSILQEQKRASREALDKINPVFNFNENL 153

Query: 121 DSMREFAKLLES 128
           DSMREF K+LES
Sbjct: 154 DSMREFEKILES 165

[Close]

BLAST of CsGy5G004305 vs. NCBI nr
Match: KAE8647905.1 (hypothetical protein Csa_000421, partial [Cucumis sativus])

HSP 1 Score: 202 bits (513), Expect = 7.43e-64
Identity = 109/132 (82.58%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 1   MKPYNIHQRKKSNSDHDLANFKCPSPK-NNIPVLPIKPNT-IVVLSPRRAARVEVLKAKF 60
           MKPYNI+QRK+S SD +LANFKCPSPK NNI +LP+KPNT IVVLSPRRAARVEVLKAKF
Sbjct: 34  MKPYNIYQRKESKSDRELANFKCPSPKKNNIELLPVKPNTTIVVLSPRRAARVEVLKAKF 93

Query: 61  GSTILKAQQKLHNSNNDSNKHEYIV-GATPNICSI-QEQRQALREALDKINPAFDFNENL 120
           GSTILKAQQKL NSNNDSNK+EY+V GATP  CSI QEQ++A REALDKINP FDFNENL
Sbjct: 94  GSTILKAQQKLQNSNNDSNKYEYVVVGATPKTCSILQEQKRASREALDKINPVFDFNENL 153

Query: 121 DSMREFAKLLES 128
           DSMREF K+LES
Sbjct: 154 DSMREFEKILES 165

[Close]

BLAST of CsGy5G004305 vs. NCBI nr
Match: KAE8647906.1 (hypothetical protein Csa_000254, partial [Cucumis sativus])

HSP 1 Score: 186 bits (471), Expect = 6.77e-58
Identity = 103/129 (79.84%), Postives = 112/129 (86.82%), Query Frame = 0


Query: 1   MKPYNIHQRKKSNSDHDLANFKCPSPK-NNIPVLPIKPNT-IVVLSPRRAARVEVLKAKF 60
           MKPYNIHQRK+SN DH+L NFKC SPK NNI +LPIKPNT IVVLSPRRAARVEVLKAKF
Sbjct: 1   MKPYNIHQRKESNGDHELTNFKCLSPKKNNIELLPIKPNTTIVVLSPRRAARVEVLKAKF 60

Query: 61  GSTILKAQQKLHNSNNDSNKHEYIV-GATPNICSI-QEQRQALREALDK-INPAFDFNEN 120
           GSTI KAQQKL  SNNDSNK+EY+V GATP  CSI QEQ++A REALDK INP FDFNEN
Sbjct: 61  GSTIWKAQQKLQKSNNDSNKYEYVVIGATPKTCSILQEQKRASREALDKMINPVFDFNEN 120

Query: 121 LDSMREFAK 124
           LDSM+EF +
Sbjct: 121 LDSMKEFER 129

[Close]

BLAST of CsGy5G004305 vs. NCBI nr
Match: KAE8647903.1 (hypothetical protein Csa_000590, partial [Cucumis sativus])

HSP 1 Score: 164 bits (415), Expect = 3.11e-49
Identity = 92/112 (82.14%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MKPYNIHQRKKSNSDHDLANFKCPSPK-NNIPVLPIKPNT-IVVLSPRRAARVEVLKAKF 60
           MKPYNI+QRK+S SD +LANFKCPSPK NNI +LPIKPNT IVVLSPRRAARVEVLKAKF
Sbjct: 34  MKPYNIYQRKESKSDRELANFKCPSPKKNNIELLPIKPNTTIVVLSPRRAARVEVLKAKF 93

Query: 61  GSTILKAQQKLHNSNNDSNKHEY-IVGATPNICSI-QEQRQALREALDKINP 108
           GSTILKAQQKL NSNNDSNK+EY +VGATP   SI QEQ++A REALDKINP
Sbjct: 94  GSTILKAQQKLQNSNNDSNKYEYAVVGATPKTSSILQEQKRASREALDKINP 145

[Close]

BLAST of CsGy5G004305 vs. NCBI nr
Match: KAE8647902.1 (hypothetical protein Csa_000701, partial [Cucumis sativus])

HSP 1 Score: 157 bits (398), Expect = 1.71e-47
Identity = 79/83 (95.18%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 1  MKPYNIHQRKKSNSDHDLANFKCPSPKNNIPVLPIKPNTIVVLSPRRAARVEVLKAKFGS 60
          M PYNIHQ K+SNSDHDLANFKCPSPKNNI VLPIKPNTIVVLSPRRAARVEVLKAKFGS
Sbjct: 1  MTPYNIHQIKESNSDHDLANFKCPSPKNNIAVLPIKPNTIVVLSPRRAARVEVLKAKFGS 60

Query: 61 TILKAQQKLHNSNNDSNKHEYIV 83
          TILKAQQKLHNSNNDSNKHEYIV
Sbjct: 61 TILKAQQKLHNSNNDSNKHEYIV 83

[Close]

BLAST of CsGy5G004305 vs. ExPASy TrEMBL
Match: A0A0A0KRB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G162640 PE=4 SV=1)

HSP 1 Score: 246 bits (629), Expect = 2.14e-82
Identity = 125/129 (96.90%), Postives = 126/129 (97.67%), Query Frame = 0


Query: 1   MKPYNIHQRKKSNSDHDLANFKCPSPKNNIPVLPIKPNTIVVLSPRRAARVEVLKAKFGS 60
           M PYNIHQ K+SNSDHDLANFKCPSPKNNI VLPIKPNTIVVLSPRRAARVEVLKAKFGS
Sbjct: 1   MTPYNIHQIKESNSDHDLANFKCPSPKNNIAVLPIKPNTIVVLSPRRAARVEVLKAKFGS 60

Query: 61  TILKAQQKLHNSNNDSNKHEYIVGATPNICSIQEQRQALREALDKINPAFDFNENLDSMR 120
           TILKAQQKLHNSNNDSNKHEYIVGATPNICSIQEQRQALREALDKINPAFDFNENLDSMR
Sbjct: 61  TILKAQQKLHNSNNDSNKHEYIVGATPNICSIQEQRQALREALDKINPAFDFNENLDSMR 120

Query: 121 EFAKLLESA 129
           EFAKLLESA
Sbjct: 121 EFAKLLESA 129

[Close]

BLAST of CsGy5G004305 vs. ExPASy TrEMBL
Match: A0A0A0KMZ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G164650 PE=4 SV=1)

HSP 1 Score: 186 bits (471), Expect = 1.34e-57
Identity = 103/129 (79.84%), Postives = 112/129 (86.82%), Query Frame = 0


Query: 1   MKPYNIHQRKKSNSDHDLANFKCPSPK-NNIPVLPIKPNT-IVVLSPRRAARVEVLKAKF 60
           MKPYNIHQRK+SN DH+L NFKC SPK NNI +LPIKPNT IVVLSPRRAARVEVLKAKF
Sbjct: 29  MKPYNIHQRKESNGDHELTNFKCLSPKKNNIELLPIKPNTTIVVLSPRRAARVEVLKAKF 88

Query: 61  GSTILKAQQKLHNSNNDSNKHEYIV-GATPNICSI-QEQRQALREALDK-INPAFDFNEN 120
           GSTI KAQQKL  SNNDSNK+EY+V GATP  CSI QEQ++A REALDK INP FDFNEN
Sbjct: 89  GSTIWKAQQKLQKSNNDSNKYEYVVIGATPKTCSILQEQKRASREALDKMINPVFDFNEN 148

Query: 121 LDSMREFAK 124
           LDSM+EF +
Sbjct: 149 LDSMKEFER 157

[Close]

BLAST of CsGy5G004305 vs. ExPASy TrEMBL
Match: A0A5D3D8Q3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00700 PE=4 SV=1)

HSP 1 Score: 152 bits (383), Expect = 1.70e-44
Identity = 84/125 (67.20%), Postives = 99/125 (79.20%), Query Frame = 0


Query: 6   IHQRKKSNSDHDLANFKCPSPKNN-IPVLPIKPN--TIVVLSPRRAARVEVLKAKFGSTI 65
           IHQ KKSNS+H+LA F+ PS KNN  P L  K    TI+VLSPR+AARVE+LK KFGSTI
Sbjct: 36  IHQTKKSNSNHELAKFESPSSKNNNSPTLSPKKTKTTIIVLSPRQAARVEMLKEKFGSTI 95

Query: 66  LKAQQKLHNSNNDSNKHEYIVGATPNICSIQEQRQALREALDKINPAFDFNENLDSMREF 125
           LKAQQKL  SN DSN ++Y+V   P +CSIQEQR+A RE+LDKI P FDFNENLDSMR+F
Sbjct: 96  LKAQQKL--SNKDSNIYKYVVVEAPKVCSIQEQRRASRESLDKIKPVFDFNENLDSMRDF 155

Query: 126 AKLLE 127
            +LL+
Sbjct: 156 EELLK 158

[Close]

BLAST of CsGy5G004305 vs. ExPASy TrEMBL
Match: A0A5A7VFH7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G003590 PE=4 SV=1)

HSP 1 Score: 150 bits (379), Expect = 6.89e-44
Identity = 83/125 (66.40%), Postives = 99/125 (79.20%), Query Frame = 0


Query: 6   IHQRKKSNSDHDLANFKCPSPKNN--IPVLPIKPNT-IVVLSPRRAARVEVLKAKFGSTI 65
           IHQ KKSNS+H+LA F+ PS KNN    + P K  T I+VLSPR+AARVE+LK KFGSTI
Sbjct: 36  IHQTKKSNSNHELAKFESPSSKNNNSTTLSPKKTKTTIIVLSPRQAARVEMLKEKFGSTI 95

Query: 66  LKAQQKLHNSNNDSNKHEYIVGATPNICSIQEQRQALREALDKINPAFDFNENLDSMREF 125
           LKAQQKL  SN DSN ++Y+V   P +CSIQEQR+A RE+LDKI P FDFNENLDSMR+F
Sbjct: 96  LKAQQKL--SNKDSNIYKYVVVEAPKVCSIQEQRRASRESLDKIKPVFDFNENLDSMRDF 155

Query: 126 AKLLE 127
            +LL+
Sbjct: 156 EELLK 158

[Close]

BLAST of CsGy5G004305 vs. ExPASy TrEMBL
Match: A0A6J5THZ9 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS2845 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 4.46e-05
Identity = 45/130 (34.62%), Postives = 64/130 (49.23%), Query Frame = 0


Query: 12  SNSDHDLANFKCPSPKNNIPVLPIKPNTIVVLSPRRAARVEVLKAKFGSTILKAQQK--- 71
           S+SD  L+N   PS + N             LSPRRAARV +LKA+F  TI KA+Q+   
Sbjct: 40  SDSDSVLSNATTPSDEIN-------------LSPRRAARVAMLKARFAGTIFKAKQEVLY 99

Query: 72  -----LHNSNNDSNKHEYIVGATPNICSIQEQRQALREA----LDKINPAFDFNENLDSM 129
                L N+ ++  K         N   I+EQRQ  REA    L+++      ++N  +M
Sbjct: 100 SGSNGLENTEDEIKKFRAAEMMKANDY-IKEQRQRDREAARLALEEMERNVVIDDNFKTM 155

The following BLAST results are available for this feature:

BLAST of CsGy5G004305 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy5G004305 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61401.2	3.69e-64	83.33	hypothetical protein Csa_006690, partial [Cucumis sativus]	[more]
KAE8647905.1	7.43e-64	82.58	hypothetical protein Csa_000421, partial [Cucumis sativus]	[more]
KAE8647906.1	6.77e-58	79.84	hypothetical protein Csa_000254, partial [Cucumis sativus]	[more]
KAE8647903.1	3.11e-49	82.14	hypothetical protein Csa_000590, partial [Cucumis sativus]	[more]
KAE8647902.1	1.71e-47	95.18	hypothetical protein Csa_000701, partial [Cucumis sativus]	[more]

BLAST of CsGy5G004305 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRB6	2.14e-82	96.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G162640 PE=4 SV=1	[more]
A0A0A0KMZ1	1.34e-57	79.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G164650 PE=4 SV=1	[more]
A0A5D3D8Q3	1.70e-44	67.20	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VFH7	6.89e-44	66.40	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J5THZ9	4.46e-05	34.62	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS2845 PE=4 SV...	[more]

BLAST of CsGy5G004305 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G004305.1	CsGy5G004305.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045332	phospholipid translocation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0140326	ATPase-coupled intramembrane lipid transporter activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0000287	magnesium ion binding