CsGy5G002000 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCATAAAGTTATAATTAATACTCAAATTAAAGTAAAAACCAATTTCGTATTTTTCCTTTTGAACTCCAAATTTTAAGACCCAAATAAAATTGTTTTCTGGATTTTTCTTCACTGCAAATGACCCAATCCTAGTTGTTTGAACTTCGGAGCTGCAAACCTCACTACCCAATTGACCAAAAGCCATAGAAATCAATCCCATTTCCTTCCAAAGATGATAACCCATCTCTGTTCTCTTCGTCACCCTCCAACTTCTCCATTCATCTCAACTTTTCTGAGCTCTTCTCCTTCTTCTTTCCCCAGTGTTGGAGCAAACCCATACAGGATTTCAGTGGAGCCTCACCCTCTCAGAAACAGAAGCTTCATAAGTAAAAGAAATGGGATTATCTGTGGGGCAATTTTACCTGTGGATCCATGGGCGCCCAACATCGATTCTCAGAGCATAGCCTCCCAGATTTTTGCCTTTTCCCTCTTTCCTTACATTGGTTTCTTGTACTTCATCACCAAATCAAAGACCGCTCCCAAGCTCACTCTCTTCGGTTTCTATTTCTTGCTTGCCTTTGTGGGTGCTACCAGTGAGTTCCCATCTCCTTTATTTTTTATTTTCAGTCCAATAAGGGTGGCACAACTTCTTGATTTTTAGAGAAATTGGCTTGTGGGTCTATGAATTACCTCCGATTTTGAAGTTTAGAATTACTAGATTAGGATATATCTACCCATTTGTATTTGCTTGCAGAAGAATTGGCATCTTTATCCACTTTGTTACAGTTTACAAACAGGAAGAACGGTGTTTGAAGTAGAATTTGCATATTGGGTTTATTTTTTCTTTTCTTTTTGAGTTCAGCAATTGTGGAATTGTGGTGGTAGGATTGAACCATCGACCTTTGGATGGTAACTTTTTCATATTCGGACAGTTTAGTTGTCAGCAAAGATTAAAGTATCAATCTTGTTATTGATATTGTAATTTTTTCCCCTTATCAGTACAATTTCTCTGTTAGTTTTCATTTTGGTTTTTGGTTTCTTTCACATGAACTTCCTCCGAATCTGGTTGAAATTCTTTTTACACTTTTTGAATGAAAATTTTAATCCTAATGCCTATTATTTATTACTGATAACTACTTGATTTCAATTCATGCTGGCTACAACTCTGCAGTTCCTGCTGGAATATATGGTAATTATTCCTCATTAAACAACATTTTATATTCACATTGCTCTACTTTTTCTTCTTTCATAAATGACCAAATTGTTTAAATTCCAATTGCTTTGCTCTCTTGGAACAGCAAAGGTTCATTATGGAACTTCCTTGTCTAATGTTGACTGGTTACATGGAGGGGCTGAATCACTTCTCACTCTGACAAATCTTTTCATTGTGTTGGGATTGAGAGGAGCTCTTAGGAAATATGGGGAGGCTGAAAACTCTACATCCTCATCTGTTCTAGAGTTGGAAAAAGAGGAGGCTGTGTTAGATAAATAGTTATATGTTCCAAACACTTTTGTTGAAATATTTGTTTCTATGGGCTTTGTGGCCTTTAAATATACGACGAAAAATCAAGCAATATTAAAAATGTGCATTCTCGTTTTACTCTCTCCTCCACTGTTATATAAACTTCCCCTTTGAGTTGTATGAACATCACTCATCACTCATCAACCATTATAATTATGATTCTATCTTGGTTTTGCTTTATGGAAGCTTTTGGCTAACTTCTTAGCATTTGCACAACTGTTAAGGTCTTTTAGGTTTCAATAAAATTTCCATTGAGAACTATTCTCATTCCTTTACTGCAGGAGTCTTGCTGCTTTTCATTCTACTGATGCACAGCCAATTTCCAAGCGACTTTAATCAGTTCTTGCAAGTAGTGCATAAAGTTCCTCGCTTGTCCACTTCAAAATAATATGTGCAAACCATTTTTTCTCTTTTTCTTCATTATTCCTCAGTTGCTCAGCTTATTTGACATGATTGTGGTGTGGTGAACTACGAGTAATATGAGTGCAAAAGCTCCTTCTGTACAGAAAAAAAGTGC CCATAAAGTTATAATTAATACTCAAATTAAAGTAAAAACCAATTTCGTATTTTTCCTTTTGAACTCCAAATTTTAAGACCCAAATAAAATTGTTTTCTGGATTTTTCTTCACTGCAAATGACCCAATCCTAGTTGTTTGAACTTCGGAGCTGCAAACCTCACTACCCAATTGACCAAAAGCCATAGAAATCAATCCCATTTCCTTCCAAAGATGATAACCCATCTCTGTTCTCTTCGTCACCCTCCAACTTCTCCATTCATCTCAACTTTTCTGAGCTCTTCTCCTTCTTCTTTCCCCAGTGTTGGAGCAAACCCATACAGGATTTCAGTGGAGCCTCACCCTCTCAGAAACAGAAGCTTCATAAGTAAAAGAAATGGGATTATCTGTGGGGCAATTTTACCTGTGGATCCATGGGCGCCCAACATCGATTCTCAGAGCATAGCCTCCCAGATTTTTGCCTTTTCCCTCTTTCCTTACATTGGTTTCTTGTACTTCATCACCAAATCAAAGACCGCTCCCAAGCTCACTCTCTTCGGTTTCTATTTCTTGCTTGCCTTTGTGGGTGCTACCATTCCTGCTGGAATATATGCAAAGGTTCATTATGGAACTTCCTTGTCTAATGTTGACTGGTTACATGGAGGGGCTGAATCACTTCTCACTCTGACAAATCTTTTCATTGTGTTGGGATTGAGAGGAGCTCTTAGGAAATATGGGGAGGCTGAAAACTCTACATCCTCATCTGTTCTAGAGTTGGAAAAAGAGGAGGCTGTGTTAGATAAATAGTTATATGTTCCAAACACTTTTGTTGAAATATTTGTTTCTATGGGCTTTGTGGCCTTTAAATATACGACGAAAAATCAAGCAATATTAAAAATGTGCATTCTCGTTTTACTCTCTCCTCCACTGTTATATAAACTTCCCCTTTGAGTTGTATGAACATCACTCATCACTCATCAACCATTATAATTATGATTCTATCTTGGTTTTGCTTTATGGAAGCTTTTGGCTAACTTCTTAGCATTTGCACAACTGTTAAGGTCTTTTAGGTTTCAATAAAATTTCCATTGAGAACTATTCTCATTCCTTTACTGCAGGAGTCTTGCTGCTTTTCATTCTACTGATGCACAGCCAATTTCCAAGCGACTTTAATCAGTTCTTGCAAGTAGTGCATAAAGTTCCTCGCTTGTCCACTTCAAAATAATATGTGCAAACCATTTTTTCTCTTTTTCTTCATTATTCCTCAGTTGCTCAGCTTATTTGACATGATTGTGGTGTGGTGAACTACGAGTAATATGAGTGCAAAAGCTCCTTCTGTACAGAAAAAAAGTGC ATGATAACCCATCTCTGTTCTCTTCGTCACCCTCCAACTTCTCCATTCATCTCAACTTTTCTGAGCTCTTCTCCTTCTTCTTTCCCCAGTGTTGGAGCAAACCCATACAGGATTTCAGTGGAGCCTCACCCTCTCAGAAACAGAAGCTTCATAAGTAAAAGAAATGGGATTATCTGTGGGGCAATTTTACCTGTGGATCCATGGGCGCCCAACATCGATTCTCAGAGCATAGCCTCCCAGATTTTTGCCTTTTCCCTCTTTCCTTACATTGGTTTCTTGTACTTCATCACCAAATCAAAGACCGCTCCCAAGCTCACTCTCTTCGGTTTCTATTTCTTGCTTGCCTTTGTGGGTGCTACCATTCCTGCTGGAATATATGCAAAGGTTCATTATGGAACTTCCTTGTCTAATGTTGACTGGTTACATGGAGGGGCTGAATCACTTCTCACTCTGACAAATCTTTTCATTGTGTTGGGATTGAGAGGAGCTCTTAGGAAATATGGGGAGGCTGAAAACTCTACATCCTCATCTGTTCTAGAGTTGGAAAAAGAGGAGGCTGTGTTAGATAAATAG MITHLCSLRHPPTSPFISTFLSSSPSSFPSVGANPYRISVEPHPLRNRSFISKRNGIICGAILPVDPWAPNIDSQSIASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATIPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYGEAENSTSSSVLELEKEEAVLDK* Homology
BLAST of CsGy5G002000 vs. NCBI nr
Match: XP_004143873.1 (uncharacterized protein LOC101210365 isoform X1 [Cucumis sativus] >KGN50028.1 hypothetical protein Csa_000626 [Cucumis sativus]) HSP 1 Score: 375 bits (964), Expect = 3.60e-131 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0
BLAST of CsGy5G002000 vs. NCBI nr
Match: TYK06093.1 (1-acyl-sn-glycerol-3-phosphate acyltransferase delta isoform 1 [Cucumis melo var. makuwa]) HSP 1 Score: 357 bits (916), Expect = 7.51e-124 Identity = 180/190 (94.74%), Postives = 185/190 (97.37%), Query Frame = 0
BLAST of CsGy5G002000 vs. NCBI nr
Match: XP_011654701.1 (uncharacterized protein LOC101210365 isoform X2 [Cucumis sativus]) HSP 1 Score: 355 bits (911), Expect = 3.51e-123 Identity = 183/190 (96.32%), Postives = 183/190 (96.32%), Query Frame = 0
BLAST of CsGy5G002000 vs. NCBI nr
Match: XP_038876261.1 (uncharacterized protein LOC120068528 isoform X2 [Benincasa hispida]) HSP 1 Score: 344 bits (883), Expect = 7.78e-119 Identity = 176/190 (92.63%), Postives = 183/190 (96.32%), Query Frame = 0
BLAST of CsGy5G002000 vs. NCBI nr
Match: KAA0042690.1 (DUF3593 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 337 bits (863), Expect = 7.30e-116 Identity = 173/190 (91.05%), Postives = 178/190 (93.68%), Query Frame = 0
BLAST of CsGy5G002000 vs. ExPASy TrEMBL
Match: A0A0A0KKE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G150460 PE=4 SV=1) HSP 1 Score: 375 bits (964), Expect = 1.74e-131 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0
BLAST of CsGy5G002000 vs. ExPASy TrEMBL
Match: A0A5D3C2E2 (1-acyl-sn-glycerol-3-phosphate acyltransferase delta isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001940 PE=4 SV=1) HSP 1 Score: 357 bits (916), Expect = 3.63e-124 Identity = 180/190 (94.74%), Postives = 185/190 (97.37%), Query Frame = 0
BLAST of CsGy5G002000 vs. ExPASy TrEMBL
Match: A0A5A7TH63 (DUF3593 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G001880 PE=4 SV=1) HSP 1 Score: 337 bits (863), Expect = 3.53e-116 Identity = 173/190 (91.05%), Postives = 178/190 (93.68%), Query Frame = 0
BLAST of CsGy5G002000 vs. ExPASy TrEMBL
Match: A0A1S3AVB2 (uncharacterized protein LOC103483076 OS=Cucumis melo OX=3656 GN=LOC103483076 PE=4 SV=1) HSP 1 Score: 311 bits (796), Expect = 7.86e-106 Identity = 156/162 (96.30%), Postives = 160/162 (98.77%), Query Frame = 0
BLAST of CsGy5G002000 vs. ExPASy TrEMBL
Match: A0A6J1EL81 (uncharacterized protein LOC111435592 OS=Cucurbita moschata OX=3662 GN=LOC111435592 PE=4 SV=1) HSP 1 Score: 310 bits (794), Expect = 1.20e-105 Identity = 163/186 (87.63%), Postives = 171/186 (91.94%), Query Frame = 0
BLAST of CsGy5G002000 vs. TAIR 10
Match: AT1G64355.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3593 (InterPro:IPR021995); Has 301 Blast hits to 301 proteins in 96 species: Archae - 0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). ) HSP 1 Score: 201.8 bits (512), Expect = 4.8e-52 Identity = 110/166 (66.27%), Postives = 125/166 (75.30%), Query Frame = 0
BLAST of CsGy5G002000 vs. TAIR 10
Match: AT1G64355.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3593 (InterPro:IPR021995); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 129.8 bits (325), Expect = 2.3e-30 Identity = 75/135 (55.56%), Postives = 90/135 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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